recQ-mediated genome instability protein 1 [Danio rerio]
OB fold domain-containing protein( domain architecture ID 11179258)
oligonucleotide/oligosaccharide (OB) fold domain-containing protein may bind nucleic acids, similar to Schizosaccharomyces pombe RecQ-mediated genome instability protein 1 (RMI), a structure-specific DNA-binding protein with a preference for cruciform structures, that functions together with SGS1 and TOP3 to maintain genome integrity
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
RMI1_N | pfam08585 | RecQ mediated genome instability protein; RMI1_N is an N-terminal family of eukaryotic ... |
13-204 | 1.94e-66 | ||||
RecQ mediated genome instability protein; RMI1_N is an N-terminal family of eukaryotic proteins. The domain probably carries an oligo-nucleotide-binding domain or OB-fold, and forms a stable complex with Bloom syndrome protein BLM and DNA topoisomerase 3-alpha. : Pssm-ID: 462527 Cd Length: 194 Bit Score: 212.90 E-value: 1.94e-66
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RMI1_C | pfam16099 | Recq-mediated genome instability protein 1, C-terminal OB-fold; RMI1_C is a C-terminal ... |
382-510 | 1.70e-47 | ||||
Recq-mediated genome instability protein 1, C-terminal OB-fold; RMI1_C is a C-terminal oligo-nucleotide binding domain of Recq-mediated genome instability proteins. This domain interacts with RMI2-OB folds to make up the RMI core complex. The RMI core interface is crucial for BLM, Bloom syndrome, dissolvasome assembly and may have additional cellular roles as a docking hub for other proteins. : Pssm-ID: 465021 Cd Length: 138 Bit Score: 161.28 E-value: 1.70e-47
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Name | Accession | Description | Interval | E-value | ||||
RMI1_N | pfam08585 | RecQ mediated genome instability protein; RMI1_N is an N-terminal family of eukaryotic ... |
13-204 | 1.94e-66 | ||||
RecQ mediated genome instability protein; RMI1_N is an N-terminal family of eukaryotic proteins. The domain probably carries an oligo-nucleotide-binding domain or OB-fold, and forms a stable complex with Bloom syndrome protein BLM and DNA topoisomerase 3-alpha. Pssm-ID: 462527 Cd Length: 194 Bit Score: 212.90 E-value: 1.94e-66
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RMI1_C | pfam16099 | Recq-mediated genome instability protein 1, C-terminal OB-fold; RMI1_C is a C-terminal ... |
382-510 | 1.70e-47 | ||||
Recq-mediated genome instability protein 1, C-terminal OB-fold; RMI1_C is a C-terminal oligo-nucleotide binding domain of Recq-mediated genome instability proteins. This domain interacts with RMI2-OB folds to make up the RMI core complex. The RMI core interface is crucial for BLM, Bloom syndrome, dissolvasome assembly and may have additional cellular roles as a docking hub for other proteins. Pssm-ID: 465021 Cd Length: 138 Bit Score: 161.28 E-value: 1.70e-47
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Name | Accession | Description | Interval | E-value | ||||
RMI1_N | pfam08585 | RecQ mediated genome instability protein; RMI1_N is an N-terminal family of eukaryotic ... |
13-204 | 1.94e-66 | ||||
RecQ mediated genome instability protein; RMI1_N is an N-terminal family of eukaryotic proteins. The domain probably carries an oligo-nucleotide-binding domain or OB-fold, and forms a stable complex with Bloom syndrome protein BLM and DNA topoisomerase 3-alpha. Pssm-ID: 462527 Cd Length: 194 Bit Score: 212.90 E-value: 1.94e-66
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RMI1_C | pfam16099 | Recq-mediated genome instability protein 1, C-terminal OB-fold; RMI1_C is a C-terminal ... |
382-510 | 1.70e-47 | ||||
Recq-mediated genome instability protein 1, C-terminal OB-fold; RMI1_C is a C-terminal oligo-nucleotide binding domain of Recq-mediated genome instability proteins. This domain interacts with RMI2-OB folds to make up the RMI core complex. The RMI core interface is crucial for BLM, Bloom syndrome, dissolvasome assembly and may have additional cellular roles as a docking hub for other proteins. Pssm-ID: 465021 Cd Length: 138 Bit Score: 161.28 E-value: 1.70e-47
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Blast search parameters | ||||
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