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Conserved domains on  [gi|32565876|ref|NP_872073|]
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protein of unknown function DB domain-containing protein [Caenorhabditis elegans]

Protein Classification

DB domain-containing protein( domain architecture ID 10483687)

DB domain-containing protein; the DB domain contains 12 conserved cysteines that may form six disulfide bridges

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DB pfam01682
DB module; This domain has no known function. It is found in several C. elegans proteins. The ...
 26-123 3.89e-15

DB module; This domain has no known function. It is found in several C. elegans proteins. The domain contains 12 conserved cysteines that probably form six disulphide bridges. This domain is found associated with ig pfam00047 and fn3 pfam00041 domains, as well as in some lipases pfam00657.


:

Pssm-ID: 460293  Cd Length: 98  Bit Score: 66.01  E-value: 3.89e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565876    26 CCATLKDADKeCVDrFCDFNALSQANILNFMSTCGerGPTVGEMWDCASLRHNHEDCCKKAGVSGECLKYCTAHKGAPSN 105
Cdd:pfam01682   1 CCSEKGVPSS-CLS-LCSYDAINKDALLLFLAPRC--PPELPKILRCAADGRDHTPCCKRRGVPDKCLGFCPGNVDLLSD 76

                          90       100
                  ....*....|....*....|..
gi 32565876   106 Y----LDYAFCTENFNEIRDCF 123
Cdd:pfam01682  77 VtpldKSYLFCLSYFENIKQCF 98
 
Name Accession Description Interval E-value
DB pfam01682
DB module; This domain has no known function. It is found in several C. elegans proteins. The ...
 26-123 3.89e-15

DB module; This domain has no known function. It is found in several C. elegans proteins. The domain contains 12 conserved cysteines that probably form six disulphide bridges. This domain is found associated with ig pfam00047 and fn3 pfam00041 domains, as well as in some lipases pfam00657.


Pssm-ID: 460293  Cd Length: 98  Bit Score: 66.01  E-value: 3.89e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565876    26 CCATLKDADKeCVDrFCDFNALSQANILNFMSTCGerGPTVGEMWDCASLRHNHEDCCKKAGVSGECLKYCTAHKGAPSN 105
Cdd:pfam01682   1 CCSEKGVPSS-CLS-LCSYDAINKDALLLFLAPRC--PPELPKILRCAADGRDHTPCCKRRGVPDKCLGFCPGNVDLLSD 76

                          90       100
                  ....*....|....*....|..
gi 32565876   106 Y----LDYAFCTENFNEIRDCF 123
Cdd:pfam01682  77 VtpldKSYLFCLSYFENIKQCF 98
 
Name Accession Description Interval E-value
DB pfam01682
DB module; This domain has no known function. It is found in several C. elegans proteins. The ...
 26-123 3.89e-15

DB module; This domain has no known function. It is found in several C. elegans proteins. The domain contains 12 conserved cysteines that probably form six disulphide bridges. This domain is found associated with ig pfam00047 and fn3 pfam00041 domains, as well as in some lipases pfam00657.


Pssm-ID: 460293  Cd Length: 98  Bit Score: 66.01  E-value: 3.89e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565876    26 CCATLKDADKeCVDrFCDFNALSQANILNFMSTCGerGPTVGEMWDCASLRHNHEDCCKKAGVSGECLKYCTAHKGAPSN 105
Cdd:pfam01682   1 CCSEKGVPSS-CLS-LCSYDAINKDALLLFLAPRC--PPELPKILRCAADGRDHTPCCKRRGVPDKCLGFCPGNVDLLSD 76

                          90       100
                  ....*....|....*....|..
gi 32565876   106 Y----LDYAFCTENFNEIRDCF 123
Cdd:pfam01682  77 VtpldKSYLFCLSYFENIKQCF 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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