|
Name |
Accession |
Description |
Interval |
E-value |
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
5901-6774 |
0e+00 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
:
Pssm-ID: 464867 Cd Length: 877 Bit Score: 1405.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5901 SSDKIPSIDKTLVNKVVHSSVCNILNDYGSQDSIWKNINSNGENLARRLTSAVINEIFQRQVNLIFCDEVSVSACLPLES 5980
Cdd:pfam15783 1 FLMKIPSIDKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLES 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5981 KDVVKKVQKLAQTASKECQTSSPYTIILPHKFLENVISALFSKIFSTISSTKTKEPEDNLSTELNFLQMKLVSAVATEIS 6060
Cdd:pfam15783 81 KDVKKKVQKVAQTASKECQTSSPYTIILPHLFLEIVISALLSKIFSTNAKAKTEESEDNLLTELDFLQMKLVSTVETEIS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6061 QDKYMTIQYVETLQSDDDEIIQLVVQSVYNNLLPQFGSQEIIQNCVTSGCKILSENIVDLVLREVASNQLQSYFCGELTP 6140
Cdd:pfam15783 161 KDEDMIIQYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGELTP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6141 HQCVEVENIVEKILKDVFQTTDVPLPKPSHADKLSYNIIEEIAVKFLSKLLSIFPKVHKERTKSLETDMQKITSKVLNSV 6220
Cdd:pfam15783 241 CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVFPKVDKEKNKSLETEMQKITSKILNSD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6221 QEFISKSKIKLVPPTKESPTVPVADNATIENIVNSIYTSVLKHSGSYTSVFKDLMGKSNVLSDTIGFLMVNAISNSEFQP 6300
Cdd:pfam15783 321 QEFISKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNSEFQP 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6301 QVEEEVSNSELVLEAVKIMEKVIKIIDELKSKEKSSSRKGLTLDAKLLEEVLALFLAKLIRLPSSSSKDEKNLSKTELNK 6380
Cdd:pfam15783 401 QEEEEVSSSELVLEAVKIMEKVVKIIDKLKSKEKSSSRKVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLSKPELNK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6381 IASQLSKLVTAEISRSSISLIASDPEEHCLNPENTERIYQVVDSVYSNILQQSGTNKEFYYDIKDTNTAFPKKVASLIID 6460
Cdd:pfam15783 481 IASQLTKSVTAEISKSNISLVAADPEEIFLNPENIEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNFVFPKKVASLIID 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6461 GVSSFPLDTINSTISNADLSGELDVNRIVQKAQEHAFNVIPELEQEKLDQNLSEEESPIKIVPHVGKKPVKIDPKIISEH 6540
Cdd:pfam15783 561 SVSSFPLDTSSSKNSDADLFGDLDINRIVEKAQEHAIKMEPDLEKEELDQDEEEEELPIKIVPHVGKKPIKIDPIIVSEH 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6541 LAVISIKTQPLEKLKQECLKRTGHSIAELRRASISGRNYS-LGSPDLEKRKTERRTSLDKTGRLDVKPLEAVARNSFQNI 6619
Cdd:pfam15783 641 LAVISIKTQPLEKLQMECLTRTGHSIAELRRASISGRSYSdTDASERGKRKRERRISLDGTGRLDVKPLEAVNRNSFQNL 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6620 RKPDITKVELLKDVQSKNDLIVRLVAHDIDQVYLENYIKEERDSDEDEVVLTQTFAKEEGI-KVFEDQVKEVKKPIQSKL 6698
Cdd:pfam15783 721 RKPDITKVELLKDVKSKKDLIIRLVAHDIEQEESESEIGEISDSDEDEVVLQEVVGGEECEeELNEDQVKEKPKPIKSKV 800
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 970414523 6699 -SPKSTLSTSSLKKFLSLSKCCQTTASANIESTEAISNQVIESKETHVKRAVAELDMATPKTMPETASSSWEEKPQC 6774
Cdd:pfam15783 801 pSPKPTTSTSSLKKFLSLSKCCQPTSSINIESIEASSNQEIESEETKVKRAVAELDMCTTKSTETDTSSSWEKKTQK 877
|
|
| FSIP2 super family |
cl24371 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4043-4607 |
4.43e-24 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
The actual alignment was detected with superfamily member pfam15783:
Pssm-ID: 464867 Cd Length: 877 Bit Score: 112.91 E-value: 4.43e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4043 VSKIVDSVYYDVLQQYELKVACGNNPVYDNASIAEQITNGILLEILDYKLPSCFKEHLIPHSYYPLKPEIILQKLQSNLT 4122
Cdd:pfam15783 13 VNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQKVAQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4123 EFTSLPRSSSDYSTMLSHSFLEDVIRRLLSQlipppITCSSLGKKYLMSSD-----FNEMSTCIINKVMSAISKHKiwft 4197
Cdd:pfam15783 93 TASKECQTSSPYTIILPHLFLEIVISALLSK-----IFSTNAKAKTEESEDnllteLDFLQMKLVSTVETEISKDE---- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4198 iyDNQYLYT-------GKNLQKMVDSVYCNILQMSDSLVSIQKSIVSRSPIMIDQIASFIIQEIIENHLQPFLSGEVlcH 4270
Cdd:pfam15783 164 --DMIIQYVeslhpndDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGEL--T 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4271 PRTPLDpVSTIVTQVLSEVIES-HRPQKQS----PLDIHLdsfVREIVARLLSKIFSPKHN--------TEIELKNMTQR 4337
Cdd:pfam15783 240 PCQCVE-VDSVVENILKDVIQTtPVPQPQPshalKLPYNI---IEEIAVKFLSKLLSVFPKvdkeknksLETEMQKITSK 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4338 IVNSINRHFNKAKIHILYDDKEQAFFSFNTDIVDE-LATSVYRNALKQHGLDLAVDKE-SEDSGIFVENITNLIVAAISD 4415
Cdd:pfam15783 316 ILNSDQEFISKSKIKVVPPAKESATVPLADNATIEkVVNSVYTSVLKHSGSHTSVFKDlMGKSNVLSDIIGFLMVKEISN 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4416 YLLHPLFSGDFSASTY---SNSVAENIVQDILSNISKSTEPSQSVplynTLLPYTFLEDMIRVLLSKLFSSASSlvLNRD 4492
Cdd:pfam15783 396 SEFQPQEEEEVSSSELvleAVKIMEKVVKIIDKLKSKEKSSSRKV----LMLDALFLEEALALFLAKLVKLPSA--SSKD 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4493 TqKDISRVNFNDIASNLVSDIRMKVSQHEIRFSKEEEETKFIYSE--DDIQHLVDSVFANVVQTSGSQESAVQNITSSND 4570
Cdd:pfam15783 470 A-KNLSKPELNKIASQLTKSVTAEISKSNISLVAADPEEIFLNPEniEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNF 548
|
570 580 590
....*....|....*....|....*....|....*..
gi 970414523 4571 ILIDRIAGFIIKHICQkhlQPFVSGKSLSSSDTYFDD 4607
Cdd:pfam15783 549 VFPKKVASLIIDSVSS---FPLDTSSSKNSDADLFGD 582
|
|
| FSIP2 super family |
cl24371 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
5017-5405 |
1.09e-10 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
The actual alignment was detected with superfamily member pfam15783:
Pssm-ID: 464867 Cd Length: 877 Bit Score: 69.00 E-value: 1.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5017 YKEMVQKIVNSVYGKVLDQYKSLIQIHRVIQSDTICFGRKIYYLLLEEIYDYQVQSLVSGELESSSYSYPQADNIIRNVL 5096
Cdd:pfam15783 9 DKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5097 NII---TKDSHALPPYITVLPHSLLEDMVYRLLGHVFpSTHTENELKEKKFPPDDEFVEAASKLTDEIIKEISEHEI--- 5170
Cdd:pfam15783 89 KVAqtaSKECQTSSPYTIILPHLFLEIVISALLSKIF-STNAKAKTEESEDNLLTELDFLQMKLVSTVETEISKDEDmii 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5171 --RLSMAEDNAESMQLepienLVDSICNNILKTSEFQAEVQKDAdKKGCSFLSK-LAGFIMKEIMYHHLQPFLHGEESSF 5247
Cdd:pfam15783 168 qyVESLHPNDDEIIQL-----VVQSIYNNLLPQFGSQEQIQNCV-GSGCRILSEtIVDLVLREVAGNQLQNYFSGELTPC 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5248 SDlSDYDHVSELAKSGKEKT----QPSLYSATFLE-DIIIDLVHKFCSLLI---ITEDSKKNEMAELDIMGLALKLANSl 5319
Cdd:pfam15783 242 QC-VEVDSVVENILKDVIQTtpvpQPQPSHALKLPyNIIEEIAVKFLSKLLsvfPKVDKEKNKSLETEMQKITSKILNS- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5320 IREFK-KSDIKVLPNAEKMFSFPPIDKETVDKISNFVYEQFIEKCTSHDIQKGD---ESNIAIGMIAALTQKAISAFRIQ 5395
Cdd:pfam15783 320 DQEFIsKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDlmgKSNVLSDIIGFLMVKEISNSEFQ 399
|
410
....*....|
gi 970414523 5396 PLFSGDWSST 5405
Cdd:pfam15783 400 PQEEEEVSSS 409
|
|
| FSIP2 super family |
cl24371 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4544-5035 |
7.63e-09 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
The actual alignment was detected with superfamily member pfam15783:
Pssm-ID: 464867 Cd Length: 877 Bit Score: 62.84 E-value: 7.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4544 VDSVFANVVQTSGSQESAVQNITSSNDILIDRIAGFIIKHICQKHLQ-----PFVSGKSLSSSDTYFDDERRQLF----- 4613
Cdd:pfam15783 17 VHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNlifedEVPASACLPLESKDVKKKVQKVAqtask 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4614 -------YTSVYSSTFLEDVISGVLRKIFhrvVGIVQTKSiRDSEDELFEkaeELIHL-------ITGEFSKAQVSIIdn 4679
Cdd:pfam15783 97 ecqtsspYTIILPHLFLEIVISALLSKIF---STNAKAKT-EESEDNLLT---ELDFLqmklvstVETEISKDEDMII-- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4680 tEERLCLPPVERDVVKTIVDMVYSKVLQEYEMEVVPNKDFLNDTKTLAARITNIILAEI--------FDFQIHPdlianl 4751
Cdd:pfam15783 168 -QYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVagnqlqnyFSGELTP------ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4752 pfksHSKLSANVLIQRVQYDISKSRFQRQASTMYTTMLSHSHLEKIVTQLTSQISPL--NTSAEQSDTTKSDLSNTVIKL 4829
Cdd:pfam15783 241 ----CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVfpKVDKEKNKSLETEMQKITSKI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4830 INEIMSIISKHEICIIKYGNKKQSMISAK--DIQSMVDSIYAD-LSHSNIYQSITKDKKSISDIPVSKIASFIIKEIFNH 4906
Cdd:pfam15783 317 LNSDQEFISKSKIKVVPPAKESATVPLADnaTIEKVVNSVYTSvLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNS 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4907 HIQSFLSEDKT---LLLAAVDQTYKLKAI--DPKQRELS----FIVNSSVFLEEVISELLCKILYAFSHNMLVTENPDrv 4977
Cdd:pfam15783 397 EFQPQEEEEVSsseLVLEAVKIMEKVVKIidKLKSKEKSssrkVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLS-- 474
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 970414523 4978 KLKLTRIVTTLVNSIVLEFTTSEI-LVADNFDKNLCFSERyKEMVQKIVNSVYGKVLDQ 5035
Cdd:pfam15783 475 KPELNKIASQLTKSVTAEISKSNIsLVAADPEEIFLNPEN-IEMISQVVDSVYSNVLQQ 532
|
|
| DUF5401 super family |
cl38662 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
135-306 |
5.87e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
The actual alignment was detected with superfamily member pfam17380:
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 56.67 E-value: 5.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 135 RELNKYRQylTSLKLDFERnyIKEQRILakQLHNIPENNQIPQHCDVAQVQNWLLKEGTESIKDQERLMRHryldmiSRK 214
Cdd:pfam17380 360 RELERIRQ--EEIAMEISR--MRELERL--QMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQ------IRA 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 215 LEQLERTAEEQRLflmdrEERRQREHTRRKLtlrrkiEEEWKTKEMLLLTRMAEDVKREERIEEQQHRNREESDRKKQDL 294
Cdd:pfam17380 428 EQEEARQREVRRL-----EEERAREMERVRL------EEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKI 496
|
170
....*....|..
gi 970414523 295 LEKKMAYHLQKM 306
Cdd:pfam17380 497 LEKELEERKQAM 508
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
5901-6774 |
0e+00 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 1405.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5901 SSDKIPSIDKTLVNKVVHSSVCNILNDYGSQDSIWKNINSNGENLARRLTSAVINEIFQRQVNLIFCDEVSVSACLPLES 5980
Cdd:pfam15783 1 FLMKIPSIDKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLES 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5981 KDVVKKVQKLAQTASKECQTSSPYTIILPHKFLENVISALFSKIFSTISSTKTKEPEDNLSTELNFLQMKLVSAVATEIS 6060
Cdd:pfam15783 81 KDVKKKVQKVAQTASKECQTSSPYTIILPHLFLEIVISALLSKIFSTNAKAKTEESEDNLLTELDFLQMKLVSTVETEIS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6061 QDKYMTIQYVETLQSDDDEIIQLVVQSVYNNLLPQFGSQEIIQNCVTSGCKILSENIVDLVLREVASNQLQSYFCGELTP 6140
Cdd:pfam15783 161 KDEDMIIQYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGELTP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6141 HQCVEVENIVEKILKDVFQTTDVPLPKPSHADKLSYNIIEEIAVKFLSKLLSIFPKVHKERTKSLETDMQKITSKVLNSV 6220
Cdd:pfam15783 241 CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVFPKVDKEKNKSLETEMQKITSKILNSD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6221 QEFISKSKIKLVPPTKESPTVPVADNATIENIVNSIYTSVLKHSGSYTSVFKDLMGKSNVLSDTIGFLMVNAISNSEFQP 6300
Cdd:pfam15783 321 QEFISKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNSEFQP 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6301 QVEEEVSNSELVLEAVKIMEKVIKIIDELKSKEKSSSRKGLTLDAKLLEEVLALFLAKLIRLPSSSSKDEKNLSKTELNK 6380
Cdd:pfam15783 401 QEEEEVSSSELVLEAVKIMEKVVKIIDKLKSKEKSSSRKVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLSKPELNK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6381 IASQLSKLVTAEISRSSISLIASDPEEHCLNPENTERIYQVVDSVYSNILQQSGTNKEFYYDIKDTNTAFPKKVASLIID 6460
Cdd:pfam15783 481 IASQLTKSVTAEISKSNISLVAADPEEIFLNPENIEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNFVFPKKVASLIID 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6461 GVSSFPLDTINSTISNADLSGELDVNRIVQKAQEHAFNVIPELEQEKLDQNLSEEESPIKIVPHVGKKPVKIDPKIISEH 6540
Cdd:pfam15783 561 SVSSFPLDTSSSKNSDADLFGDLDINRIVEKAQEHAIKMEPDLEKEELDQDEEEEELPIKIVPHVGKKPIKIDPIIVSEH 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6541 LAVISIKTQPLEKLKQECLKRTGHSIAELRRASISGRNYS-LGSPDLEKRKTERRTSLDKTGRLDVKPLEAVARNSFQNI 6619
Cdd:pfam15783 641 LAVISIKTQPLEKLQMECLTRTGHSIAELRRASISGRSYSdTDASERGKRKRERRISLDGTGRLDVKPLEAVNRNSFQNL 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6620 RKPDITKVELLKDVQSKNDLIVRLVAHDIDQVYLENYIKEERDSDEDEVVLTQTFAKEEGI-KVFEDQVKEVKKPIQSKL 6698
Cdd:pfam15783 721 RKPDITKVELLKDVKSKKDLIIRLVAHDIEQEESESEIGEISDSDEDEVVLQEVVGGEECEeELNEDQVKEKPKPIKSKV 800
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 970414523 6699 -SPKSTLSTSSLKKFLSLSKCCQTTASANIESTEAISNQVIESKETHVKRAVAELDMATPKTMPETASSSWEEKPQC 6774
Cdd:pfam15783 801 pSPKPTTSTSSLKKFLSLSKCCQPTSSINIESIEASSNQEIESEETKVKRAVAELDMCTTKSTETDTSSSWEKKTQK 877
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4043-4607 |
4.43e-24 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 112.91 E-value: 4.43e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4043 VSKIVDSVYYDVLQQYELKVACGNNPVYDNASIAEQITNGILLEILDYKLPSCFKEHLIPHSYYPLKPEIILQKLQSNLT 4122
Cdd:pfam15783 13 VNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQKVAQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4123 EFTSLPRSSSDYSTMLSHSFLEDVIRRLLSQlipppITCSSLGKKYLMSSD-----FNEMSTCIINKVMSAISKHKiwft 4197
Cdd:pfam15783 93 TASKECQTSSPYTIILPHLFLEIVISALLSK-----IFSTNAKAKTEESEDnllteLDFLQMKLVSTVETEISKDE---- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4198 iyDNQYLYT-------GKNLQKMVDSVYCNILQMSDSLVSIQKSIVSRSPIMIDQIASFIIQEIIENHLQPFLSGEVlcH 4270
Cdd:pfam15783 164 --DMIIQYVeslhpndDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGEL--T 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4271 PRTPLDpVSTIVTQVLSEVIES-HRPQKQS----PLDIHLdsfVREIVARLLSKIFSPKHN--------TEIELKNMTQR 4337
Cdd:pfam15783 240 PCQCVE-VDSVVENILKDVIQTtPVPQPQPshalKLPYNI---IEEIAVKFLSKLLSVFPKvdkeknksLETEMQKITSK 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4338 IVNSINRHFNKAKIHILYDDKEQAFFSFNTDIVDE-LATSVYRNALKQHGLDLAVDKE-SEDSGIFVENITNLIVAAISD 4415
Cdd:pfam15783 316 ILNSDQEFISKSKIKVVPPAKESATVPLADNATIEkVVNSVYTSVLKHSGSHTSVFKDlMGKSNVLSDIIGFLMVKEISN 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4416 YLLHPLFSGDFSASTY---SNSVAENIVQDILSNISKSTEPSQSVplynTLLPYTFLEDMIRVLLSKLFSSASSlvLNRD 4492
Cdd:pfam15783 396 SEFQPQEEEEVSSSELvleAVKIMEKVVKIIDKLKSKEKSSSRKV----LMLDALFLEEALALFLAKLVKLPSA--SSKD 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4493 TqKDISRVNFNDIASNLVSDIRMKVSQHEIRFSKEEEETKFIYSE--DDIQHLVDSVFANVVQTSGSQESAVQNITSSND 4570
Cdd:pfam15783 470 A-KNLSKPELNKIASQLTKSVTAEISKSNISLVAADPEEIFLNPEniEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNF 548
|
570 580 590
....*....|....*....|....*....|....*..
gi 970414523 4571 ILIDRIAGFIIKHICQkhlQPFVSGKSLSSSDTYFDD 4607
Cdd:pfam15783 549 VFPKKVASLIIDSVSS---FPLDTSSSKNSDADLFGD 582
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
5017-5405 |
1.09e-10 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 69.00 E-value: 1.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5017 YKEMVQKIVNSVYGKVLDQYKSLIQIHRVIQSDTICFGRKIYYLLLEEIYDYQVQSLVSGELESSSYSYPQADNIIRNVL 5096
Cdd:pfam15783 9 DKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5097 NII---TKDSHALPPYITVLPHSLLEDMVYRLLGHVFpSTHTENELKEKKFPPDDEFVEAASKLTDEIIKEISEHEI--- 5170
Cdd:pfam15783 89 KVAqtaSKECQTSSPYTIILPHLFLEIVISALLSKIF-STNAKAKTEESEDNLLTELDFLQMKLVSTVETEISKDEDmii 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5171 --RLSMAEDNAESMQLepienLVDSICNNILKTSEFQAEVQKDAdKKGCSFLSK-LAGFIMKEIMYHHLQPFLHGEESSF 5247
Cdd:pfam15783 168 qyVESLHPNDDEIIQL-----VVQSIYNNLLPQFGSQEQIQNCV-GSGCRILSEtIVDLVLREVAGNQLQNYFSGELTPC 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5248 SDlSDYDHVSELAKSGKEKT----QPSLYSATFLE-DIIIDLVHKFCSLLI---ITEDSKKNEMAELDIMGLALKLANSl 5319
Cdd:pfam15783 242 QC-VEVDSVVENILKDVIQTtpvpQPQPSHALKLPyNIIEEIAVKFLSKLLsvfPKVDKEKNKSLETEMQKITSKILNS- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5320 IREFK-KSDIKVLPNAEKMFSFPPIDKETVDKISNFVYEQFIEKCTSHDIQKGD---ESNIAIGMIAALTQKAISAFRIQ 5395
Cdd:pfam15783 320 DQEFIsKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDlmgKSNVLSDIIGFLMVKEISNSEFQ 399
|
410
....*....|
gi 970414523 5396 PLFSGDWSST 5405
Cdd:pfam15783 400 PQEEEEVSSS 409
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4544-5035 |
7.63e-09 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 62.84 E-value: 7.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4544 VDSVFANVVQTSGSQESAVQNITSSNDILIDRIAGFIIKHICQKHLQ-----PFVSGKSLSSSDTYFDDERRQLF----- 4613
Cdd:pfam15783 17 VHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNlifedEVPASACLPLESKDVKKKVQKVAqtask 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4614 -------YTSVYSSTFLEDVISGVLRKIFhrvVGIVQTKSiRDSEDELFEkaeELIHL-------ITGEFSKAQVSIIdn 4679
Cdd:pfam15783 97 ecqtsspYTIILPHLFLEIVISALLSKIF---STNAKAKT-EESEDNLLT---ELDFLqmklvstVETEISKDEDMII-- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4680 tEERLCLPPVERDVVKTIVDMVYSKVLQEYEMEVVPNKDFLNDTKTLAARITNIILAEI--------FDFQIHPdlianl 4751
Cdd:pfam15783 168 -QYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVagnqlqnyFSGELTP------ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4752 pfksHSKLSANVLIQRVQYDISKSRFQRQASTMYTTMLSHSHLEKIVTQLTSQISPL--NTSAEQSDTTKSDLSNTVIKL 4829
Cdd:pfam15783 241 ----CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVfpKVDKEKNKSLETEMQKITSKI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4830 INEIMSIISKHEICIIKYGNKKQSMISAK--DIQSMVDSIYAD-LSHSNIYQSITKDKKSISDIPVSKIASFIIKEIFNH 4906
Cdd:pfam15783 317 LNSDQEFISKSKIKVVPPAKESATVPLADnaTIEKVVNSVYTSvLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNS 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4907 HIQSFLSEDKT---LLLAAVDQTYKLKAI--DPKQRELS----FIVNSSVFLEEVISELLCKILYAFSHNMLVTENPDrv 4977
Cdd:pfam15783 397 EFQPQEEEEVSsseLVLEAVKIMEKVVKIidKLKSKEKSssrkVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLS-- 474
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 970414523 4978 KLKLTRIVTTLVNSIVLEFTTSEI-LVADNFDKNLCFSERyKEMVQKIVNSVYGKVLDQ 5035
Cdd:pfam15783 475 KPELNKIASQLTKSVTAEISKSNIsLVAADPEEIFLNPEN-IEMISQVVDSVYSNVLQQ 532
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
135-306 |
5.87e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 56.67 E-value: 5.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 135 RELNKYRQylTSLKLDFERnyIKEQRILakQLHNIPENNQIPQHCDVAQVQNWLLKEGTESIKDQERLMRHryldmiSRK 214
Cdd:pfam17380 360 RELERIRQ--EEIAMEISR--MRELERL--QMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQ------IRA 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 215 LEQLERTAEEQRLflmdrEERRQREHTRRKLtlrrkiEEEWKTKEMLLLTRMAEDVKREERIEEQQHRNREESDRKKQDL 294
Cdd:pfam17380 428 EQEEARQREVRRL-----EEERAREMERVRL------EEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKI 496
|
170
....*....|..
gi 970414523 295 LEKKMAYHLQKM 306
Cdd:pfam17380 497 LEKELEERKQAM 508
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
134-408 |
2.76e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 2.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 134 LRELNKYRQYLTSLKLDFERNYIKEQRILAKQLHNIPEnnqipqhcdvAQVQNWLLKEGTESIKDQERLMRHRYLDMisR 213
Cdd:PTZ00121 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE----------AKIKAEELKKAEEEKKKVEQLKKKEAEEK--K 1647
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 214 KLEQLERTAEEQRLflMDREERRQREHTRRKLTLRRKIEEEWKTKEMLLL-------------------TRMAEDVKREE 274
Cdd:PTZ00121 1648 KAEELKKAEEENKI--KAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKkeaeeakkaeelkkkeaeeKKKAEELKKAE 1725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 275 ---RIEEQQHRNREESDRKKQDLL-----EKKMAYHLQKMQDTGF-----NGEDIGKNTFKYRGQDGTHASPKNKKKTSE 341
Cdd:PTZ00121 1726 eenKIKAEEAKKEAEEDKKKAEEAkkdeeEKKKIAHLKKEEEKKAeeirkEKEAVIEEELDEEDEKRRMEVDKKIKDIFD 1805
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 970414523 342 DIMLVYPAGDQNT-YKETHGHTANAAHQRQNSSNNfTKKNSASVVYQADVQDNGINQKrDGMVSKNSS 408
Cdd:PTZ00121 1806 NFANIIEGGKEGNlVINDSKEMEDSAIKEVADSKN-MQLEEADAFEKHKFNKNNENGE-DGNKEADFN 1871
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
5901-6774 |
0e+00 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 1405.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5901 SSDKIPSIDKTLVNKVVHSSVCNILNDYGSQDSIWKNINSNGENLARRLTSAVINEIFQRQVNLIFCDEVSVSACLPLES 5980
Cdd:pfam15783 1 FLMKIPSIDKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLES 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5981 KDVVKKVQKLAQTASKECQTSSPYTIILPHKFLENVISALFSKIFSTISSTKTKEPEDNLSTELNFLQMKLVSAVATEIS 6060
Cdd:pfam15783 81 KDVKKKVQKVAQTASKECQTSSPYTIILPHLFLEIVISALLSKIFSTNAKAKTEESEDNLLTELDFLQMKLVSTVETEIS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6061 QDKYMTIQYVETLQSDDDEIIQLVVQSVYNNLLPQFGSQEIIQNCVTSGCKILSENIVDLVLREVASNQLQSYFCGELTP 6140
Cdd:pfam15783 161 KDEDMIIQYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGELTP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6141 HQCVEVENIVEKILKDVFQTTDVPLPKPSHADKLSYNIIEEIAVKFLSKLLSIFPKVHKERTKSLETDMQKITSKVLNSV 6220
Cdd:pfam15783 241 CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVFPKVDKEKNKSLETEMQKITSKILNSD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6221 QEFISKSKIKLVPPTKESPTVPVADNATIENIVNSIYTSVLKHSGSYTSVFKDLMGKSNVLSDTIGFLMVNAISNSEFQP 6300
Cdd:pfam15783 321 QEFISKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNSEFQP 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6301 QVEEEVSNSELVLEAVKIMEKVIKIIDELKSKEKSSSRKGLTLDAKLLEEVLALFLAKLIRLPSSSSKDEKNLSKTELNK 6380
Cdd:pfam15783 401 QEEEEVSSSELVLEAVKIMEKVVKIIDKLKSKEKSSSRKVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLSKPELNK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6381 IASQLSKLVTAEISRSSISLIASDPEEHCLNPENTERIYQVVDSVYSNILQQSGTNKEFYYDIKDTNTAFPKKVASLIID 6460
Cdd:pfam15783 481 IASQLTKSVTAEISKSNISLVAADPEEIFLNPENIEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNFVFPKKVASLIID 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6461 GVSSFPLDTINSTISNADLSGELDVNRIVQKAQEHAFNVIPELEQEKLDQNLSEEESPIKIVPHVGKKPVKIDPKIISEH 6540
Cdd:pfam15783 561 SVSSFPLDTSSSKNSDADLFGDLDINRIVEKAQEHAIKMEPDLEKEELDQDEEEEELPIKIVPHVGKKPIKIDPIIVSEH 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6541 LAVISIKTQPLEKLKQECLKRTGHSIAELRRASISGRNYS-LGSPDLEKRKTERRTSLDKTGRLDVKPLEAVARNSFQNI 6619
Cdd:pfam15783 641 LAVISIKTQPLEKLQMECLTRTGHSIAELRRASISGRSYSdTDASERGKRKRERRISLDGTGRLDVKPLEAVNRNSFQNL 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 6620 RKPDITKVELLKDVQSKNDLIVRLVAHDIDQVYLENYIKEERDSDEDEVVLTQTFAKEEGI-KVFEDQVKEVKKPIQSKL 6698
Cdd:pfam15783 721 RKPDITKVELLKDVKSKKDLIIRLVAHDIEQEESESEIGEISDSDEDEVVLQEVVGGEECEeELNEDQVKEKPKPIKSKV 800
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 970414523 6699 -SPKSTLSTSSLKKFLSLSKCCQTTASANIESTEAISNQVIESKETHVKRAVAELDMATPKTMPETASSSWEEKPQC 6774
Cdd:pfam15783 801 pSPKPTTSTSSLKKFLSLSKCCQPTSSINIESIEASSNQEIESEETKVKRAVAELDMCTTKSTETDTSSSWEKKTQK 877
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4043-4607 |
4.43e-24 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 112.91 E-value: 4.43e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4043 VSKIVDSVYYDVLQQYELKVACGNNPVYDNASIAEQITNGILLEILDYKLPSCFKEHLIPHSYYPLKPEIILQKLQSNLT 4122
Cdd:pfam15783 13 VNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQKVAQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4123 EFTSLPRSSSDYSTMLSHSFLEDVIRRLLSQlipppITCSSLGKKYLMSSD-----FNEMSTCIINKVMSAISKHKiwft 4197
Cdd:pfam15783 93 TASKECQTSSPYTIILPHLFLEIVISALLSK-----IFSTNAKAKTEESEDnllteLDFLQMKLVSTVETEISKDE---- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4198 iyDNQYLYT-------GKNLQKMVDSVYCNILQMSDSLVSIQKSIVSRSPIMIDQIASFIIQEIIENHLQPFLSGEVlcH 4270
Cdd:pfam15783 164 --DMIIQYVeslhpndDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVAGNQLQNYFSGEL--T 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4271 PRTPLDpVSTIVTQVLSEVIES-HRPQKQS----PLDIHLdsfVREIVARLLSKIFSPKHN--------TEIELKNMTQR 4337
Cdd:pfam15783 240 PCQCVE-VDSVVENILKDVIQTtPVPQPQPshalKLPYNI---IEEIAVKFLSKLLSVFPKvdkeknksLETEMQKITSK 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4338 IVNSINRHFNKAKIHILYDDKEQAFFSFNTDIVDE-LATSVYRNALKQHGLDLAVDKE-SEDSGIFVENITNLIVAAISD 4415
Cdd:pfam15783 316 ILNSDQEFISKSKIKVVPPAKESATVPLADNATIEkVVNSVYTSVLKHSGSHTSVFKDlMGKSNVLSDIIGFLMVKEISN 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4416 YLLHPLFSGDFSASTY---SNSVAENIVQDILSNISKSTEPSQSVplynTLLPYTFLEDMIRVLLSKLFSSASSlvLNRD 4492
Cdd:pfam15783 396 SEFQPQEEEEVSSSELvleAVKIMEKVVKIIDKLKSKEKSSSRKV----LMLDALFLEEALALFLAKLVKLPSA--SSKD 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4493 TqKDISRVNFNDIASNLVSDIRMKVSQHEIRFSKEEEETKFIYSE--DDIQHLVDSVFANVVQTSGSQESAVQNITSSND 4570
Cdd:pfam15783 470 A-KNLSKPELNKIASQLTKSVTAEISKSNISLVAADPEEIFLNPEniEMISQVVDSVYSNVLQQSGTDKELYYDIKGTNF 548
|
570 580 590
....*....|....*....|....*....|....*..
gi 970414523 4571 ILIDRIAGFIIKHICQkhlQPFVSGKSLSSSDTYFDD 4607
Cdd:pfam15783 549 VFPKKVASLIIDSVSS---FPLDTSSSKNSDADLFGD 582
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4209-4707 |
4.50e-15 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 83.25 E-value: 4.50e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4209 NLQKMVDSVYCNILQMSDSLVSIQKSIVSRSPIMIDQIASFIIQEIIENHLQPFLSGEV---LCHPRTPLDPVSTIVTQV 4285
Cdd:pfam15783 12 LVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVpasACLPLESKDVKKKVQKVA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4286 LSEVIEShrpQKQSPLDIHLD-SFVREIVARLLSKIFSPKHNTE---------IELKNMTQRIVNSINRHFNKAK-IHIL 4354
Cdd:pfam15783 92 QTASKEC---QTSSPYTIILPhLFLEIVISALLSKIFSTNAKAKteesednllTELDFLQMKLVSTVETEISKDEdMIIQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4355 Y------DDKEqaffsfntdIVDELATSVYRNALKQHGLDLAVDKESEdSG--IFVENITNLIVAAISDYLLHPLFSGDF 4426
Cdd:pfam15783 169 YveslhpNDDE---------IIQLVVQSIYNNLLPQFGSQEQIQNCVG-SGcrILSETIVDLVLREVAGNQLQNYFSGEL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4427 SASTYSNSvaENIVQDILSNISKSTEPSQSVPLYNTLLPYTFLEDMIRVLLSKLFssasSLVLNRDTQKDISR-VNFNDI 4505
Cdd:pfam15783 239 TPCQCVEV--DSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLL----SVFPKVDKEKNKSLeTEMQKI 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4506 ASNLVSDIRMKVSQHEIRFSKEEEETKFIYSED--DIQHLVDSVFANVVQTSGSQESAVQNITSSNDILIDRIAGFIIKH 4583
Cdd:pfam15783 313 TSKILNSDQEFISKSKIKVVPPAKESATVPLADnaTIEKVVNSVYTSVLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKE 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4584 ICQKHLQPFVsGKSLSSS-----------------DTYFDDERRQLFYTSVYSSTFLEDVISGVLRKIFhRVVGIVQTKS 4646
Cdd:pfam15783 393 ISNSEFQPQE-EEEVSSSelvleavkimekvvkiiDKLKSKEKSSSRKVLMLDALFLEEALALFLAKLV-KLPSASSKDA 470
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 970414523 4647 IRDSEDELFEKAEELIHLITGEFSKAQVSIIDNTEERLCLPPVERDVVKTIVDMVYSKVLQ 4707
Cdd:pfam15783 471 KNLSKPELNKIASQLTKSVTAEISKSNISLVAADPEEIFLNPENIEMISQVVDSVYSNVLQ 531
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
5017-5405 |
1.09e-10 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 69.00 E-value: 1.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5017 YKEMVQKIVNSVYGKVLDQYKSLIQIHRVIQSDTICFGRKIYYLLLEEIYDYQVQSLVSGELESSSYSYPQADNIIRNVL 5096
Cdd:pfam15783 9 DKTLVNKVVHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKKVQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5097 NII---TKDSHALPPYITVLPHSLLEDMVYRLLGHVFpSTHTENELKEKKFPPDDEFVEAASKLTDEIIKEISEHEI--- 5170
Cdd:pfam15783 89 KVAqtaSKECQTSSPYTIILPHLFLEIVISALLSKIF-STNAKAKTEESEDNLLTELDFLQMKLVSTVETEISKDEDmii 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5171 --RLSMAEDNAESMQLepienLVDSICNNILKTSEFQAEVQKDAdKKGCSFLSK-LAGFIMKEIMYHHLQPFLHGEESSF 5247
Cdd:pfam15783 168 qyVESLHPNDDEIIQL-----VVQSIYNNLLPQFGSQEQIQNCV-GSGCRILSEtIVDLVLREVAGNQLQNYFSGELTPC 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5248 SDlSDYDHVSELAKSGKEKT----QPSLYSATFLE-DIIIDLVHKFCSLLI---ITEDSKKNEMAELDIMGLALKLANSl 5319
Cdd:pfam15783 242 QC-VEVDSVVENILKDVIQTtpvpQPQPSHALKLPyNIIEEIAVKFLSKLLsvfPKVDKEKNKSLETEMQKITSKILNS- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5320 IREFK-KSDIKVLPNAEKMFSFPPIDKETVDKISNFVYEQFIEKCTSHDIQKGD---ESNIAIGMIAALTQKAISAFRIQ 5395
Cdd:pfam15783 320 DQEFIsKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDlmgKSNVLSDIIGFLMVKEISNSEFQ 399
|
410
....*....|
gi 970414523 5396 PLFSGDWSST 5405
Cdd:pfam15783 400 PQEEEEVSSS 409
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4544-5035 |
7.63e-09 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 62.84 E-value: 7.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4544 VDSVFANVVQTSGSQESAVQNITSSNDILIDRIAGFIIKHICQKHLQ-----PFVSGKSLSSSDTYFDDERRQLF----- 4613
Cdd:pfam15783 17 VHSSVCNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNlifedEVPASACLPLESKDVKKKVQKVAqtask 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4614 -------YTSVYSSTFLEDVISGVLRKIFhrvVGIVQTKSiRDSEDELFEkaeELIHL-------ITGEFSKAQVSIIdn 4679
Cdd:pfam15783 97 ecqtsspYTIILPHLFLEIVISALLSKIF---STNAKAKT-EESEDNLLT---ELDFLqmklvstVETEISKDEDMII-- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4680 tEERLCLPPVERDVVKTIVDMVYSKVLQEYEMEVVPNKDFLNDTKTLAARITNIILAEI--------FDFQIHPdlianl 4751
Cdd:pfam15783 168 -QYVESLHPNDDEIIQLVVQSIYNNLLPQFGSQEQIQNCVGSGCRILSETIVDLVLREVagnqlqnyFSGELTP------ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4752 pfksHSKLSANVLIQRVQYDISKSRFQRQASTMYTTMLSHSHLEKIVTQLTSQISPL--NTSAEQSDTTKSDLSNTVIKL 4829
Cdd:pfam15783 241 ----CQCVEVDSVVENILKDVIQTTPVPQPQPSHALKLPYNIIEEIAVKFLSKLLSVfpKVDKEKNKSLETEMQKITSKI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4830 INEIMSIISKHEICIIKYGNKKQSMISAK--DIQSMVDSIYAD-LSHSNIYQSITKDKKSISDIPVSKIASFIIKEIFNH 4906
Cdd:pfam15783 317 LNSDQEFISKSKIKVVPPAKESATVPLADnaTIEKVVNSVYTSvLKHSGSHTSVFKDLMGKSNVLSDIIGFLMVKEISNS 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4907 HIQSFLSEDKT---LLLAAVDQTYKLKAI--DPKQRELS----FIVNSSVFLEEVISELLCKILYAFSHNMLVTENPDrv 4977
Cdd:pfam15783 397 EFQPQEEEEVSsseLVLEAVKIMEKVVKIidKLKSKEKSssrkVLMLDALFLEEALALFLAKLVKLPSASSKDAKNLS-- 474
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 970414523 4978 KLKLTRIVTTLVNSIVLEFTTSEI-LVADNFDKNLCFSERyKEMVQKIVNSVYGKVLDQ 5035
Cdd:pfam15783 475 KPELNKIASQLTKSVTAEISKSNIsLVAADPEEIFLNPEN-IEMISQVVDSVYSNVLQQ 532
|
|
| FSIP2 |
pfam15783 |
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the ... |
4692-5202 |
1.03e-07 |
|
Fibrous sheath-interacting protein 2; FSIP2, fibrous sheath-interacting protein 2, is the C-terminal portion of a family of proteins found in mammals. The function is not known but the domain appears to be repeated up to 10 times in some members.
Pssm-ID: 464867 Cd Length: 877 Bit Score: 59.37 E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4692 DVVKTIVDMVYS----KVLQEYEMEVVPNKDFLNDTKTLAARITNIILAEIFDFQIHPDLIANLPFKSHSKLSANVLIQR 4767
Cdd:pfam15783 7 SIDKTLVNKVVHssvcNILKEYRSQDSICKNINSNGENLARRLASAVINEIFQHQLNLIFEDEVPASACLPLESKDVKKK 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4768 VQYDISKSRFQRQASTMYTTMLSHSHLEKIVTQLTSQISPLNTSAEQS---DTTKSDLSNTVIKLINEIMSIISKHEICI 4844
Cdd:pfam15783 87 VQKVAQTASKECQTSSPYTIILPHLFLEIVISALLSKIFSTNAKAKTEeseDNLLTELDFLQMKLVSTVETEISKDEDMI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4845 IKYgnkKQSMISAKD--IQSMVDSIYADL-----SHSNIYQSITKDKKSISDIpvskIASFIIKEIFNHHIQSFLSEDKT 4917
Cdd:pfam15783 167 IQY---VESLHPNDDeiIQLVVQSIYNNLlpqfgSQEQIQNCVGSGCRILSET----IVDLVLREVAGNQLQNYFSGELT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4918 ------------LLLAAVDQTYKLKAIDPKQ-RELSFIVnssvfLEEVISELLCKILYAFShnmlvteNPDRVKLKLT-- 4982
Cdd:pfam15783 240 pcqcvevdsvveNILKDVIQTTPVPQPQPSHaLKLPYNI-----IEEIAVKFLSKLLSVFP-------KVDKEKNKSLet 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 4983 ---RIVTTLVNSIVLEFTTSEILVADNFDKNLCFSERYKEMVQKIVNSVYGKVLDQYKSLIQIHRVIQSDTICFGRKIYY 5059
Cdd:pfam15783 308 emqKITSKILNSDQEFISKSKIKVVPPAKESATVPLADNATIEKVVNSVYTSVLKHSGSHTSVFKDLMGKSNVLSDIIGF 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 5060 LLLEEIYDYQVQSLVSGELeSSSYSYPQADNIIRNVLNIITK-DSHALPP--YITVLPHSLLEDMVYRLLGHVFPSTHTE 5136
Cdd:pfam15783 388 LMVKEISNSEFQPQEEEEV-SSSELVLEAVKIMEKVVKIIDKlKSKEKSSsrKVLMLDALFLEEALALFLAKLVKLPSAS 466
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 970414523 5137 NelKEKKFPPDDEFVEAASKLTDEIIKEISEHEIrlSMAEDNAESMQLEP-----IENLVDSICNNILKTS 5202
Cdd:pfam15783 467 S--KDAKNLSKPELNKIASQLTKSVTAEISKSNI--SLVAADPEEIFLNPeniemISQVVDSVYSNVLQQS 533
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
135-306 |
5.87e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 56.67 E-value: 5.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 135 RELNKYRQylTSLKLDFERnyIKEQRILakQLHNIPENNQIPQHCDVAQVQNWLLKEGTESIKDQERLMRHryldmiSRK 214
Cdd:pfam17380 360 RELERIRQ--EEIAMEISR--MRELERL--QMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQ------IRA 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 215 LEQLERTAEEQRLflmdrEERRQREHTRRKLtlrrkiEEEWKTKEMLLLTRMAEDVKREERIEEQQHRNREESDRKKQDL 294
Cdd:pfam17380 428 EQEEARQREVRRL-----EEERAREMERVRL------EEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKI 496
|
170
....*....|..
gi 970414523 295 LEKKMAYHLQKM 306
Cdd:pfam17380 497 LEKELEERKQAM 508
|
|
| MAP7 |
pfam05672 |
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ... |
212-305 |
1.52e-06 |
|
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.
Pssm-ID: 461709 [Multi-domain] Cd Length: 153 Bit Score: 51.58 E-value: 1.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 212 SRKLEQLERTAEEQRlflmDREE--RRQREHTRRKL--TLRRKIEEEwktkemlLLTRMAEDVKREE--RIEEQQHRNRE 285
Cdd:pfam05672 13 ARILAEKRRQAREQR----EREEqeRLEKEEEERLRkeELRRRAEEE-------RARREEEARRLEEerRREEEERQRKA 81
|
90 100
....*....|....*....|
gi 970414523 286 ESDRKKQDLLEKKMAYHLQK 305
Cdd:pfam05672 82 EEEAEEREQREQEEQERLQK 101
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
197-307 |
4.77e-05 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 49.53 E-value: 4.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 197 KDQERLMRHRYLDMISRKLEQLERTAEEQRLflmdREERRQREHTRrkltLRRKIEEEWKTK---EMLLLTRMAEDVKRE 273
Cdd:pfam13868 147 KEEEREEDERILEYLKEKAEREEEREAEREE----IEEEKEREIAR----LRAQQEKAQDEKaerDELRAKLYQEEQERK 218
|
90 100 110
....*....|....*....|....*....|....
gi 970414523 274 ERIEEqqhrnREESDRKKQDLLEKKMAYHLQKMQ 307
Cdd:pfam13868 219 ERQKE-----REEAEKKARQRQELQQAREEQIEL 247
|
|
| ARGLU |
pfam15346 |
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is ... |
210-299 |
1.10e-04 |
|
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is required for the oestrogen-dependent expression of ESR1 target genes. It functions in cooperation with MED1. The family of proteins is found in eukaryotes.
Pssm-ID: 405931 [Multi-domain] Cd Length: 151 Bit Score: 46.20 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 210 MISRKLEQLERTAEEQRlflmdREERRQREHTRRKLTLRRKIEEEWKTKEMLLLTRMAEDvkREERIEEQQHRNREESDR 289
Cdd:pfam15346 50 MEKQVLEELEREREAEL-----EEERRKEEEERKKREELERILEENNRKIEEAQRKEAEE--RLAMLEEQRRMKEERQRR 122
|
90
....*....|
gi 970414523 290 KKQDLLEKKM 299
Cdd:pfam15346 123 EKEEEEREKR 132
|
|
| MAP7 |
pfam05672 |
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ... |
213-307 |
1.31e-03 |
|
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.
Pssm-ID: 461709 [Multi-domain] Cd Length: 153 Bit Score: 43.11 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 213 RKLEQLERTAEEQRLFLMDREERRQREHTR-RKLTLRRKIEEEWKTKEMLLLTRMAEDVKREERIEEQ----QHRNREES 287
Cdd:pfam05672 27 REREEQERLEKEEEERLRKEELRRRAEEERaRREEEARRLEEERRREEEERQRKAEEEAEEREQREQEeqerLQKQKEEA 106
|
90 100
....*....|....*....|...
gi 970414523 288 DRKKQDLLEKK---MAYHLQKMQ 307
Cdd:pfam05672 107 EAKAREEAERQrqeREKIMQQEE 129
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
134-408 |
2.76e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 2.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 134 LRELNKYRQYLTSLKLDFERNYIKEQRILAKQLHNIPEnnqipqhcdvAQVQNWLLKEGTESIKDQERLMRHRYLDMisR 213
Cdd:PTZ00121 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE----------AKIKAEELKKAEEEKKKVEQLKKKEAEEK--K 1647
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 214 KLEQLERTAEEQRLflMDREERRQREHTRRKLTLRRKIEEEWKTKEMLLL-------------------TRMAEDVKREE 274
Cdd:PTZ00121 1648 KAEELKKAEEENKI--KAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKkeaeeakkaeelkkkeaeeKKKAEELKKAE 1725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 275 ---RIEEQQHRNREESDRKKQDLL-----EKKMAYHLQKMQDTGF-----NGEDIGKNTFKYRGQDGTHASPKNKKKTSE 341
Cdd:PTZ00121 1726 eenKIKAEEAKKEAEEDKKKAEEAkkdeeEKKKIAHLKKEEEKKAeeirkEKEAVIEEELDEEDEKRRMEVDKKIKDIFD 1805
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 970414523 342 DIMLVYPAGDQNT-YKETHGHTANAAHQRQNSSNNfTKKNSASVVYQADVQDNGINQKrDGMVSKNSS 408
Cdd:PTZ00121 1806 NFANIIEGGKEGNlVINDSKEMEDSAIKEVADSKN-MQLEEADAFEKHKFNKNNENGE-DGNKEADFN 1871
|
|
| CCDC34 |
pfam13904 |
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several ... |
197-292 |
3.22e-03 |
|
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several conserved tryptophan residues. The function is not known.
Pssm-ID: 464032 [Multi-domain] Cd Length: 221 Bit Score: 42.77 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 197 KDQERLMRHR-----YLDMISRKLEQLERTAEEQrlflmDREERRQREHTRRKLTLRRKIEE-------EWKTKEMLLLT 264
Cdd:pfam13904 82 EEQEAELRKRlakekYQEWLQRKARQQTKKREES-----HKQKAAESASKSLAKPERKVSQEeakevlqEWERKKLEQQQ 156
|
90 100
....*....|....*....|....*...
gi 970414523 265 RmaedvKREERIEEQQHRNREESDRKKQ 292
Cdd:pfam13904 157 R-----KREEEQREQLKKEEEEQERKQL 179
|
|
| ARGLU |
pfam15346 |
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is ... |
213-308 |
3.32e-03 |
|
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is required for the oestrogen-dependent expression of ESR1 target genes. It functions in cooperation with MED1. The family of proteins is found in eukaryotes.
Pssm-ID: 405931 [Multi-domain] Cd Length: 151 Bit Score: 41.58 E-value: 3.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 213 RKLEQL--ERTAEEqrlfLMDREERRQREHTRRKLTLRRKIEEEwktkemllltrMAEDVKREERIEEQQHRNREESDRK 290
Cdd:pfam15346 14 RRVEEAvaKRVEEE----LEKRKDEIEAEVERRVEEARKIMEKQ-----------VLEELEREREAELEEERRKEEEERK 78
|
90
....*....|....*...
gi 970414523 291 KQDLLEKKMAYHLQKMQD 308
Cdd:pfam15346 79 KREELERILEENNRKIEE 96
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
198-305 |
3.40e-03 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 43.75 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 198 DQERLMRHRYLDMISRKLEQLERTAEEQRLFL---MDREERRQREHTRRKLTLRRKIEEEWKtkemlllTRMAEDVKREE 274
Cdd:pfam13868 202 ERDELRAKLYQEEQERKERQKEREEAEKKARQrqeLQQAREEQIELKERRLAEEAEREEEEF-------ERMLRKQAEDE 274
|
90 100 110
....*....|....*....|....*....|.
gi 970414523 275 RIEEQQHRNREESDRKKQDLLEKKMAYHLQK 305
Cdd:pfam13868 275 EIEQEEAEKRRMKRLEHRRELEKQIEEREEQ 305
|
|
| RIB43A |
pfam05914 |
RIB43A; This family consists of several RIB43A-like eukaryotic proteins. Ciliary and flagellar ... |
180-308 |
4.85e-03 |
|
RIB43A; This family consists of several RIB43A-like eukaryotic proteins. Ciliary and flagellar microtubules contain a specialized set of protofilaments, termed ribbons, that are composed of tubulin and several associated proteins. RIB43A was first characterized in the unicellular biflagellate, Chlamydomonas reinhardtii although highly related sequences are present in several higher eukaryotes including humans. The function of this protein is unknown although the structure of RIB43A and its association with the specialized protofilament ribbons and with basal bodies is relevant to the proposed role of ribbons in forming and stabilising doublet and triplet microtubules and in organizing their three-dimensional structure. Human RIB43A homologs could represent a structural requirement in centriole replication in dividing cells.
Pssm-ID: 461780 [Multi-domain] Cd Length: 372 Bit Score: 43.35 E-value: 4.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 180 DVAQVQNWL----L---KEGTESIKDQERLMRHRYLDMISRKLEQLERTAEEQRLflmDREERRQREhtrrkltlrRKIE 252
Cdd:pfam05914 233 NLAEIYNHLtsdlLtenPEVAQSSLGPHRVIPDRWKGMSPEQLKEIRKEQEQQRE---EKERRREEE---------KQRD 300
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 970414523 253 EEWKTkEMLLLTRMAEdvkREERieEQQHRNREEsdRKKQDLLEKKMAYHLQKMQD 308
Cdd:pfam05914 301 AEWDR-QRLELARAAL---LLER--EQQRLRREL--RRQLDEENLQLAQEQKARQE 348
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
199-308 |
6.04e-03 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 42.98 E-value: 6.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 199 QERLMRHRYLDMISRKLEQLERTAEEQRLFLMDREERRQREHTRRKLTLRRKIEeewKTKEMLLLTRMAEDVKREERIE- 277
Cdd:pfam13868 215 QERKERQKEREEAEKKARQRQELQQAREEQIELKERRLAEEAEREEEEFERMLR---KQAEDEEIEQEEAEKRRMKRLEh 291
|
90 100 110
....*....|....*....|....*....|....*..
gi 970414523 278 ----EQQHRNREES--DRKKQDLLEKKMAYHLQKMQD 308
Cdd:pfam13868 292 rrelEKQIEEREEQraAEREEELEEGERLREEEAERR 328
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
197-305 |
6.37e-03 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 42.98 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 197 KDQERLMRHRYLDMISRKLEQLERTAEEQRLFLMDR--EERRQREHTRRKLTLRRKIEEEwktkEMLLLTRMAEDVKREE 274
Cdd:pfam13868 175 REEIEEEKEREIARLRAQQEKAQDEKAERDELRAKLyqEEQERKERQKEREEAEKKARQR----QELQQAREEQIELKER 250
|
90 100 110
....*....|....*....|....*....|...
gi 970414523 275 RIEEQQHRNREESDR--KKQDLLEKKMAYHLQK 305
Cdd:pfam13868 251 RLAEEAEREEEEFERmlRKQAEDEEIEQEEAEK 283
|
|
| DUF4659 |
pfam15558 |
Domain of unknown function (DUF4659); This family of proteins is found in eukaryotes. Proteins ... |
197-297 |
8.67e-03 |
|
Domain of unknown function (DUF4659); This family of proteins is found in eukaryotes. Proteins in this family are typically between 427 and 674 amino acids in length. There are two completely conserved residues (D and I) that may be functionally important.
Pssm-ID: 464768 [Multi-domain] Cd Length: 374 Bit Score: 42.33 E-value: 8.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970414523 197 KDQERLMRHRYLdMISRKLEQLERtAEEQRLFLMDREERRQREHTRRKLTLRrkiEEEWKT----KEMLLLTRMAEDVKR 272
Cdd:pfam15558 43 KRQETLERERRL-LLQQSQEQWQA-EKEQRKARLGREERRRADRREKQVIEK---ESRWREqaedQENQRQEKLERARQE 117
|
90 100
....*....|....*....|....*
gi 970414523 273 EERIEEQQHRNREESDRKKQDLLEK 297
Cdd:pfam15558 118 AEQRKQCQEQRLKEKEEELQALREQ 142
|
|
| |
