spondin-1 precursor [Rattus norvegicus]
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
Spond_N | pfam06468 | Spondin_N; This conserved region is found at the in the N-terminal half of several Spondin ... |
205-397 | 1.98e-108 | ||||
Spondin_N; This conserved region is found at the in the N-terminal half of several Spondin proteins. Spondins are involved in patterning axonal growth trajectory through either inhibiting or promoting adhesion of embryonic nerve cells. : Pssm-ID: 461924 Cd Length: 192 Bit Score: 329.55 E-value: 1.98e-108
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Reeler | cd08544 | Reeler, the N-terminal domain of reelin, F-spondin, and a variety of other proteins; This ... |
43-182 | 5.57e-34 | ||||
Reeler, the N-terminal domain of reelin, F-spondin, and a variety of other proteins; This domain is found at the N-terminus of F-spondin, a protein attached to the extracellular matrix, which plays roles in neuronal development and vascular remodelling. The F-spondin reeler domain has been reported to bind heparin. The reeler domain is also found at the N-terminus of reelin, an extracellular glycoprotein involved in the development of the brain cortex, and in a variety of other eukaryotic proteins with different domain architectures, including the animal ferric-chelate reductase 1 or stromal cell-derived receptor 2, a member of the cytochrome B561 family, which reduces ferric iron before its transport from the endosome to the cytoplasm. Also included is the insect putative defense protein 1, which is expressed upon bacterial infection and appears to contain a single reeler domain. : Pssm-ID: 260081 Cd Length: 135 Bit Score: 126.73 E-value: 5.57e-34
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
669-720 | 9.34e-20 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. : Pssm-ID: 465948 Cd Length: 52 Bit Score: 83.10 E-value: 9.34e-20
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
562-610 | 1.46e-15 | ||||
Thrombospondin type 1 domain; : Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 71.30 E-value: 1.46e-15
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
618-665 | 5.24e-15 | ||||
Thrombospondin type 1 domain; : Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 69.75 E-value: 5.24e-15
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
443-494 | 1.19e-13 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. : Pssm-ID: 465948 Cd Length: 52 Bit Score: 65.76 E-value: 1.19e-13
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
505-554 | 4.20e-13 | ||||
Thrombospondin type 1 domain; : Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 64.36 E-value: 4.20e-13
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
755-807 | 3.86e-10 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. : Pssm-ID: 465948 Cd Length: 52 Bit Score: 55.75 E-value: 3.86e-10
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Name | Accession | Description | Interval | E-value | ||||
Spond_N | pfam06468 | Spondin_N; This conserved region is found at the in the N-terminal half of several Spondin ... |
205-397 | 1.98e-108 | ||||
Spondin_N; This conserved region is found at the in the N-terminal half of several Spondin proteins. Spondins are involved in patterning axonal growth trajectory through either inhibiting or promoting adhesion of embryonic nerve cells. Pssm-ID: 461924 Cd Length: 192 Bit Score: 329.55 E-value: 1.98e-108
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NF038123_dom | NF038123 | spondin domain; |
205-408 | 4.46e-37 | ||||
spondin domain; Pssm-ID: 468366 Cd Length: 208 Bit Score: 138.28 E-value: 4.46e-37
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Reeler | cd08544 | Reeler, the N-terminal domain of reelin, F-spondin, and a variety of other proteins; This ... |
43-182 | 5.57e-34 | ||||
Reeler, the N-terminal domain of reelin, F-spondin, and a variety of other proteins; This domain is found at the N-terminus of F-spondin, a protein attached to the extracellular matrix, which plays roles in neuronal development and vascular remodelling. The F-spondin reeler domain has been reported to bind heparin. The reeler domain is also found at the N-terminus of reelin, an extracellular glycoprotein involved in the development of the brain cortex, and in a variety of other eukaryotic proteins with different domain architectures, including the animal ferric-chelate reductase 1 or stromal cell-derived receptor 2, a member of the cytochrome B561 family, which reduces ferric iron before its transport from the endosome to the cytoplasm. Also included is the insect putative defense protein 1, which is expressed upon bacterial infection and appears to contain a single reeler domain. Pssm-ID: 260081 Cd Length: 135 Bit Score: 126.73 E-value: 5.57e-34
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Reeler | pfam02014 | Reeler domain; |
64-171 | 1.28e-29 | ||||
Reeler domain; Pssm-ID: 460411 Cd Length: 130 Bit Score: 113.99 E-value: 1.28e-29
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
669-720 | 9.34e-20 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 83.10 E-value: 9.34e-20
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
562-610 | 1.46e-15 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 71.30 E-value: 1.46e-15
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
618-665 | 5.24e-15 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 69.75 E-value: 5.24e-15
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
443-494 | 1.19e-13 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 65.76 E-value: 1.19e-13
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
505-554 | 4.20e-13 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 64.36 E-value: 4.20e-13
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
618-666 | 8.06e-11 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 57.98 E-value: 8.06e-11
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
755-807 | 3.86e-10 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 55.75 E-value: 3.86e-10
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
504-552 | 7.93e-09 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 52.20 E-value: 7.93e-09
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
561-611 | 9.94e-09 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 51.82 E-value: 9.94e-09
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
672-720 | 8.01e-08 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 49.51 E-value: 8.01e-08
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PTZ00441 | PTZ00441 | sporozoite surface protein 2 (SSP2); Provisional |
619-670 | 2.09e-06 | ||||
sporozoite surface protein 2 (SSP2); Provisional Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 51.12 E-value: 2.09e-06
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
759-807 | 3.36e-06 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 44.89 E-value: 3.36e-06
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PTZ00441 | PTZ00441 | sporozoite surface protein 2 (SSP2); Provisional |
507-561 | 4.14e-04 | ||||
sporozoite surface protein 2 (SSP2); Provisional Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 43.80 E-value: 4.14e-04
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
446-495 | 7.35e-04 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 38.34 E-value: 7.35e-04
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Name | Accession | Description | Interval | E-value | ||||
Spond_N | pfam06468 | Spondin_N; This conserved region is found at the in the N-terminal half of several Spondin ... |
205-397 | 1.98e-108 | ||||
Spondin_N; This conserved region is found at the in the N-terminal half of several Spondin proteins. Spondins are involved in patterning axonal growth trajectory through either inhibiting or promoting adhesion of embryonic nerve cells. Pssm-ID: 461924 Cd Length: 192 Bit Score: 329.55 E-value: 1.98e-108
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NF038123_dom | NF038123 | spondin domain; |
205-408 | 4.46e-37 | ||||
spondin domain; Pssm-ID: 468366 Cd Length: 208 Bit Score: 138.28 E-value: 4.46e-37
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Reeler | cd08544 | Reeler, the N-terminal domain of reelin, F-spondin, and a variety of other proteins; This ... |
43-182 | 5.57e-34 | ||||
Reeler, the N-terminal domain of reelin, F-spondin, and a variety of other proteins; This domain is found at the N-terminus of F-spondin, a protein attached to the extracellular matrix, which plays roles in neuronal development and vascular remodelling. The F-spondin reeler domain has been reported to bind heparin. The reeler domain is also found at the N-terminus of reelin, an extracellular glycoprotein involved in the development of the brain cortex, and in a variety of other eukaryotic proteins with different domain architectures, including the animal ferric-chelate reductase 1 or stromal cell-derived receptor 2, a member of the cytochrome B561 family, which reduces ferric iron before its transport from the endosome to the cytoplasm. Also included is the insect putative defense protein 1, which is expressed upon bacterial infection and appears to contain a single reeler domain. Pssm-ID: 260081 Cd Length: 135 Bit Score: 126.73 E-value: 5.57e-34
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Reeler_cohesin_like | cd08523 | Domains similar to the eukaryotic reeler domain and bacterial cohesins; This diverse family ... |
61-180 | 2.23e-30 | ||||
Domains similar to the eukaryotic reeler domain and bacterial cohesins; This diverse family summarizes a set of distantly related domains, as revealed by structural similarity Pssm-ID: 260080 Cd Length: 128 Bit Score: 116.23 E-value: 2.23e-30
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Reeler | pfam02014 | Reeler domain; |
64-171 | 1.28e-29 | ||||
Reeler domain; Pssm-ID: 460411 Cd Length: 130 Bit Score: 113.99 E-value: 1.28e-29
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
669-720 | 9.34e-20 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 83.10 E-value: 9.34e-20
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
562-610 | 1.46e-15 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 71.30 E-value: 1.46e-15
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
618-665 | 5.24e-15 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 69.75 E-value: 5.24e-15
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
615-665 | 1.73e-14 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 68.07 E-value: 1.73e-14
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
559-610 | 8.91e-14 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 66.15 E-value: 8.91e-14
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
443-494 | 1.19e-13 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 65.76 E-value: 1.19e-13
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
505-554 | 4.20e-13 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 64.36 E-value: 4.20e-13
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
502-552 | 6.58e-11 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 58.06 E-value: 6.58e-11
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
618-666 | 8.06e-11 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 57.98 E-value: 8.06e-11
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
446-494 | 8.62e-11 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 57.81 E-value: 8.62e-11
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
672-720 | 1.54e-10 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 57.04 E-value: 1.54e-10
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
755-807 | 3.86e-10 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 55.75 E-value: 3.86e-10
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
504-552 | 7.93e-09 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 52.20 E-value: 7.93e-09
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
561-611 | 9.94e-09 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 51.82 E-value: 9.94e-09
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
758-807 | 1.56e-08 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 51.26 E-value: 1.56e-08
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
672-720 | 8.01e-08 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 49.51 E-value: 8.01e-08
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PTZ00441 | PTZ00441 | sporozoite surface protein 2 (SSP2); Provisional |
619-670 | 2.09e-06 | ||||
sporozoite surface protein 2 (SSP2); Provisional Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 51.12 E-value: 2.09e-06
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
759-807 | 3.36e-06 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 44.89 E-value: 3.36e-06
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PTZ00441 | PTZ00441 | sporozoite surface protein 2 (SSP2); Provisional |
507-561 | 4.14e-04 | ||||
sporozoite surface protein 2 (SSP2); Provisional Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 43.80 E-value: 4.14e-04
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
446-495 | 7.35e-04 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 38.34 E-value: 7.35e-04
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TSP1_ADAMTS | pfam19030 | Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
763-807 | 7.53e-04 | ||||
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins. Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 38.20 E-value: 7.53e-04
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Blast search parameters | ||||
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