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Conserved domains on  [gi|24665784|ref|NP_730244|]
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rogdi, isoform B [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Rogdi_lz super family cl12382
Rogdi leucine zipper containing protein; This is a family of conserved proteins which have ...
93-280 2.89e-31

Rogdi leucine zipper containing protein; This is a family of conserved proteins which have been suggested as containing leucine-zipper domains. A leucine zipper domain is a region of 30 amino acids with leucines repeating every seven or eight residues; these proteins do have many such leucines. The protein in Drosophila comes from the gene ROGDI.


The actual alignment was detected with superfamily member pfam10259:

Pssm-ID: 463031  Cd Length: 290  Bit Score: 119.31  E-value: 2.89e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24665784    93 EFEWVLRQEVHAILKQLRSILVECAHRFPVPlyenegKKTEKFILTvSP--DQLKAVLTLTGDAITQADISFKLCKAPSQ 170
Cdd:pfam10259   1 ELEWLLEEIIKPELPNLKDGLEECSALLAPN------EPGSTLPLS-SPrsESVKGVITRVGTRIVKGDIQLRLPSLPKG 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24665784   171 TQRTSITHDSPWKLQQVQDAANHLQTAINHIDdvddsYHFKTSDEVLHVIGNILDALQRGRNSLLVPKKKPIDELIKGRN 250
Cdd:pfam10259  74 PITLKLNPTKPIVLPQLTDARNLLNQALDLLD-----LTLWTGDELNAQLRLLLESLTEAKNLLKGPPDPELLFPENNND 148
                         170       180       190
                  ....*....|....*....|....*....|
gi 24665784   251 MKSLVPNLPEDLAVSFYLQSHKLIIAVYQL 280
Cdd:pfam10259 149 PNHFDPPLPPNLSLDLYIQEAELVLDLRNL 178
 
Name Accession Description Interval E-value
Rogdi_lz pfam10259
Rogdi leucine zipper containing protein; This is a family of conserved proteins which have ...
93-280 2.89e-31

Rogdi leucine zipper containing protein; This is a family of conserved proteins which have been suggested as containing leucine-zipper domains. A leucine zipper domain is a region of 30 amino acids with leucines repeating every seven or eight residues; these proteins do have many such leucines. The protein in Drosophila comes from the gene ROGDI.


Pssm-ID: 463031  Cd Length: 290  Bit Score: 119.31  E-value: 2.89e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24665784    93 EFEWVLRQEVHAILKQLRSILVECAHRFPVPlyenegKKTEKFILTvSP--DQLKAVLTLTGDAITQADISFKLCKAPSQ 170
Cdd:pfam10259   1 ELEWLLEEIIKPELPNLKDGLEECSALLAPN------EPGSTLPLS-SPrsESVKGVITRVGTRIVKGDIQLRLPSLPKG 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24665784   171 TQRTSITHDSPWKLQQVQDAANHLQTAINHIDdvddsYHFKTSDEVLHVIGNILDALQRGRNSLLVPKKKPIDELIKGRN 250
Cdd:pfam10259  74 PITLKLNPTKPIVLPQLTDARNLLNQALDLLD-----LTLWTGDELNAQLRLLLESLTEAKNLLKGPPDPELLFPENNND 148
                         170       180       190
                  ....*....|....*....|....*....|
gi 24665784   251 MKSLVPNLPEDLAVSFYLQSHKLIIAVYQL 280
Cdd:pfam10259 149 PNHFDPPLPPNLSLDLYIQEAELVLDLRNL 178
 
Name Accession Description Interval E-value
Rogdi_lz pfam10259
Rogdi leucine zipper containing protein; This is a family of conserved proteins which have ...
93-280 2.89e-31

Rogdi leucine zipper containing protein; This is a family of conserved proteins which have been suggested as containing leucine-zipper domains. A leucine zipper domain is a region of 30 amino acids with leucines repeating every seven or eight residues; these proteins do have many such leucines. The protein in Drosophila comes from the gene ROGDI.


Pssm-ID: 463031  Cd Length: 290  Bit Score: 119.31  E-value: 2.89e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24665784    93 EFEWVLRQEVHAILKQLRSILVECAHRFPVPlyenegKKTEKFILTvSP--DQLKAVLTLTGDAITQADISFKLCKAPSQ 170
Cdd:pfam10259   1 ELEWLLEEIIKPELPNLKDGLEECSALLAPN------EPGSTLPLS-SPrsESVKGVITRVGTRIVKGDIQLRLPSLPKG 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24665784   171 TQRTSITHDSPWKLQQVQDAANHLQTAINHIDdvddsYHFKTSDEVLHVIGNILDALQRGRNSLLVPKKKPIDELIKGRN 250
Cdd:pfam10259  74 PITLKLNPTKPIVLPQLTDARNLLNQALDLLD-----LTLWTGDELNAQLRLLLESLTEAKNLLKGPPDPELLFPENNND 148
                         170       180       190
                  ....*....|....*....|....*....|
gi 24665784   251 MKSLVPNLPEDLAVSFYLQSHKLIIAVYQL 280
Cdd:pfam10259 149 PNHFDPPLPPNLSLDLYIQEAELVLDLRNL 178
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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