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Conserved domains on  [gi|21717816|ref|NP_663623|]
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solute carrier family 15 member 4 [Homo sapiens]

Protein Classification

solute carrier 15 family transporter( domain architecture ID 13023890)

solute carrier 15 (SLC15) family transporter is proton-coupled amino-acid transporter; similar to solute carrier family 15 member 3 and solute carrier family 15 member 4

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
37-556 0e+00

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 702.32  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  37 CGAVLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLG 116
Cdd:cd17348   4 CAAVLLVELLERAAFYGITSNLVLFLNGSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLYLLG 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 117 MLAFPLLAAPATraalcgsarllnctapgpdaaarccspatFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFN 196
Cdd:cd17348  84 MLLFPATAAPAL-----------------------------YAGLLLVGLGVGSVKANITPFGADQVKDRGPEATRRFFN 134
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 197 WFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFItkppdgsaftdmfkiltysccsqkrsge 276
Cdd:cd17348 135 WFYWSINLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFLCGQPVFI---------------------------- 186
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 277 rqsngegigvfqqsskqslfdsckmshggpfteekveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEI-- 354
Cdd:cd17348 187 -------------------------------------DVKALVKILPVFLALIPYWTVYFQMQTTYVLQSLHLKIPNIfi 229
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 355 ---SNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVK 431
Cdd:cd17348 230 sniAGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKRRGLLPSSLKRIAVGMFFVMCSAIAAGILESKRLEIVK 309
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 432 EKTINQT-IGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV 510
Cdd:cd17348 310 HNTTIQQqIGNVTYYAADLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV 389
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*.
gi 21717816 511 SIKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLFLIISVK 556
Cdd:cd17348 390 SIKEIGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIISVK 435
 
Name Accession Description Interval E-value
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
37-556 0e+00

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 702.32  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  37 CGAVLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLG 116
Cdd:cd17348   4 CAAVLLVELLERAAFYGITSNLVLFLNGSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLYLLG 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 117 MLAFPLLAAPATraalcgsarllnctapgpdaaarccspatFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFN 196
Cdd:cd17348  84 MLLFPATAAPAL-----------------------------YAGLLLVGLGVGSVKANITPFGADQVKDRGPEATRRFFN 134
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 197 WFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFItkppdgsaftdmfkiltysccsqkrsge 276
Cdd:cd17348 135 WFYWSINLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFLCGQPVFI---------------------------- 186
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 277 rqsngegigvfqqsskqslfdsckmshggpfteekveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEI-- 354
Cdd:cd17348 187 -------------------------------------DVKALVKILPVFLALIPYWTVYFQMQTTYVLQSLHLKIPNIfi 229
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 355 ---SNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVK 431
Cdd:cd17348 230 sniAGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKRRGLLPSSLKRIAVGMFFVMCSAIAAGILESKRLEIVK 309
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 432 EKTINQT-IGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV 510
Cdd:cd17348 310 HNTTIQQqIGNVTYYAADLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV 389
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*.
gi 21717816 511 SIKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLFLIISVK 556
Cdd:cd17348 390 SIKEIGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIISVK 435
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
146-518 1.43e-100

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 310.02  E-value: 1.43e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   146 PDAAARCCSPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTG 225
Cdd:pfam00854  24 PSLRPPVHVALFFIGLALIALGTGGIKPNVSSFGGDQFEETDPRRRSRFFSIFYFSINAGSLISTIITPYLQQNYGYPLG 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   226 YAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSCCSQKRsgeRQSNGEGIGVFQQ----SSKQSLFDSCKM 301
Cdd:pfam00854 104 FGLPAVGMIIALLVFLLGSRMYKKKPPKGNVLTKVFKVLPVAAWNKVK---LNGSSAGIKKLHWldwaRELDALIILGIV 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   302 SHGGPF----TEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLripeisNITTTPHTLPAAWLTMFDAVLI 377
Cdd:pfam00854 181 VPGIFFniwcTKTKVEEVKRLLRVLPLFLPLIMFWALYDQMGTSWVLQARTM------NRKIGSFEIPPAQFQAFNAILV 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   378 LLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKEKTINQTignvvyhaADLSLWWQVPQ 457
Cdd:pfam00854 255 LIFIPIFDRLVYPLGRKCTGGLTPLQKMAVGLFLASLAFAIAAIVQLKRNDTGPEFPIAQE--------VPISVLWLIPQ 326
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 21717816   458 YLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV-----SIKAIGWM 518
Cdd:pfam00854 327 YLLIGFGELFISIGGLEFFYKLAPKSMTSLITGLFLLTNALGNFLSGVIATLTakptnVLGAYGWL 392
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
42-552 5.17e-35

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 137.64  E-value: 5.17e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  42 LTELLERAAFYGITSNLVLFL----NGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGM 117
Cdd:COG3104  21 FTEMWERFSFYGMRAILVLYLtaslADGGLGLSEADAAAIYGAYTALVYLTPLLGGWLADRLLGQRRAILLGGILMALGH 100
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 118 LafpLLAAPATRAALcgsarllnctapgpdaaarccspatFAGLVLVGLGVATVKANITPF------GADQVKDRGpeat 191
Cdd:COG3104 101 F---LLALPGGVTLF-------------------------YLGLALIAVGNGLFKPNISSLvgqlydPGDPRRDAG---- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 192 rrfFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVF-----ITKPPDGSAFTDMFKILTY 266
Cdd:COG3104 149 ---FTIFYMGINIGAFLAPLLCGYLGEKYGWHYGFGAAAIGMLIGLIIFLLGRKYLgdiglEPDNPLSKKERLIAVALGA 225
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 267 SCCSQKRSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGgpfteEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQS 346
Cdd:COG3104 226 LLLVLVLAGLLSNANIANYLLYVIAIIAYFIFILRSKK-----LTKEERKRLLAILILFLFSIVFWALYEQAGTSLNLFA 300
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 347 LHLRIPEISNItttphTLPAAWLTMFDAVLILLLIPLKDKLVDPiLRRHGLLPSSLKRIAVGMFFVMCS--AFAAGILES 424
Cdd:COG3104 301 DRNVDRSLFGF-----EIPPSWFQSLNPLFIIILAPVFAALWTK-LGKRGKEPSTPTKFALGLLLLGLGflVMALAALLA 374
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 425 KRLNLVkektinqtignvvyhaadlSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLffffsgvgsfvgs 504
Cdd:COG3104 375 GAGGKV-------------------SPLWLVLAYLLLTIGELCLSPVGLSMITKLAPARFAGQMMGL------------- 422
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*....
gi 21717816 505 GLLAL-VSIKAIGWMSSHTDFGNingcYLNYYFFLLAAIQGATLLLFLI 552
Cdd:COG3104 423 WFLATaLGNLLAGLLAGLYAVPG----YTAYFLLLGGIALVAGVVLLLL 467
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
51-425 7.99e-17

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 84.04  E-value: 7.99e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816    51 FYGITSNLVL----FLNgapfcWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGML-----AFP 121
Cdd:TIGR00926   3 YYGMRTILVLyflnFLG-----FSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHAllsfgAIP 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   122 LLAAPATRAAlcgsarllnctapgpdaaarccspaTFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWS 201
Cdd:TIGR00926  78 SSGHPLHDLL-------------------------DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFA 132
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   202 INLGAILSLGGIAYIQQNVS-------FVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGS-AFTDMFKILTYSCCSQKR 273
Cdd:TIGR00926 133 INAGSLISTIITPILRGDVGcfgcqdcYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNiVSKVIKCIVTALRKRFST 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   274 SGERQsngegigvfqqssKQSLFDSCKMSHGgpftEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHlRIPE 353
Cdd:TIGR00926 213 RSEHW-------------PLHWLDYAKDKHD----IRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATR-MDGD 274
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 21717816   354 ISNITTTPHTLPAawltmFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESK 425
Cdd:TIGR00926 275 VGGFEIQPDQMQV-----VNPLLILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGLLAALSFFVAALVQLK 341
PRK15462 PRK15462
dipeptide permease;
40-247 8.01e-06

dipeptide permease;


Pssm-ID: 237971 [Multi-domain]  Cd Length: 493  Bit Score: 48.79  E-value: 8.01e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   40 VLLTELLERAAFYGITSNLVLFLNGApFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 119
Cdd:PRK15462  14 VVALQIWEYFSFYGMRALLILYLTNQ-LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVV 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  120 FpllaapatraalcgsarllnctapgpdAAARCCSPATFAGLVLVGLGVATVKANITPFGADQVKdrgPEATRR--FFNW 197
Cdd:PRK15462  93 L---------------------------GASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYE---PTDPRRdgGFSL 142
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 21717816  198 FYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVF 247
Cdd:PRK15462 143 MYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHF 192
 
Name Accession Description Interval E-value
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
37-556 0e+00

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 702.32  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  37 CGAVLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLG 116
Cdd:cd17348   4 CAAVLLVELLERAAFYGITSNLVLFLNGSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLYLLG 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 117 MLAFPLLAAPATraalcgsarllnctapgpdaaarccspatFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFN 196
Cdd:cd17348  84 MLLFPATAAPAL-----------------------------YAGLLLVGLGVGSVKANITPFGADQVKDRGPEATRRFFN 134
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 197 WFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFItkppdgsaftdmfkiltysccsqkrsge 276
Cdd:cd17348 135 WFYWSINLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFLCGQPVFI---------------------------- 186
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 277 rqsngegigvfqqsskqslfdsckmshggpfteekveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEI-- 354
Cdd:cd17348 187 -------------------------------------DVKALVKILPVFLALIPYWTVYFQMQTTYVLQSLHLKIPNIfi 229
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 355 ---SNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVK 431
Cdd:cd17348 230 sniAGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKRRGLLPSSLKRIAVGMFFVMCSAIAAGILESKRLEIVK 309
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 432 EKTINQT-IGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV 510
Cdd:cd17348 310 HNTTIQQqIGNVTYYAADLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV 389
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*.
gi 21717816 511 SIKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLFLIISVK 556
Cdd:cd17348 390 SIKEIGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIISVK 435
MFS_POT cd06175
Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of ...
37-556 9.56e-155

Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of transporters; The Proton-coupled oligopeptide transporter (POT) family is present across all major kingdoms of life and is known by a variety of names. It is referred to as the Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) in plants, and in addition to POT, it is also known as the Peptide transporter (PepT/PTR) or Solute Carrier 15 (SLC15) family in animals. Members of this family are proton-driven symporters involved in nitrogen acquisition in the form of di- and tripeptides. Plant members transport other nitrogenous ligands including nitrate, the plant hormone auxin, and glucosinolate compounds that are important for seed defense. POT proteins exhibit substrate multispecificity, with one transporter able to recognize as many as 8,400 types of di/tripeptides and certain peptide-like drugs. The POT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340865 [Multi-domain]  Cd Length: 422  Bit Score: 449.96  E-value: 9.56e-155
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  37 CGAVLLTELLERAAFYGITSNLVLFLNGAPFCwEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLG 116
Cdd:cd06175   1 CAMILLIELCERFTFYGIGANLVPFLTGALGL-GNAQAANVVLNFLGTSYVTPLFGGWIADTFLGRYRTILIGAAIYAVG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 117 MLAFPLLAAPATRAALCgsarllnCTAPGPDAAARCCSPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFN 196
Cdd:cd06175  80 VAILTVSTIPPGLRPLR-------CNPSHCEQASGIQLTGFYAALYLIALGTGGVKANVSPLGADQFDERGPSKTQSFFN 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 197 WFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFlcgqsvfitkppdgsaftdmfkiltysccsqkrsge 276
Cdd:cd06175 153 WFYFCINVGSLLAMLGTPYIQDNVGWAAAYGIPFVAILLALVVF------------------------------------ 196
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 277 rqsngegigvfqqsskqslfdsckmshggpfteekveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPeisn 356
Cdd:cd06175 197 -------------------------------------EVKQLLRALPLFAFCILFWTVYAQMTTSYVLQALTLVRS---- 235
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 357 itTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKEKtin 436
Cdd:cd06175 236 --TGLFTIPPASMQAFNPILLLLLIPVLDKVVYPLIRRYGVGLSPLTKIGLGFFFGSLSMFVAGFLELKRLNTAHAH--- 310
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 437 qtigNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIG 516
Cdd:cd06175 311 ----GPVVTTSPLSFWWQIPQYLLLGIGEILVSITGLEFAYREAPKSMKGFIMGLLLLTSGFGSFFGSVLVTLVSKPTDG 386
                       490       500       510       520
                ....*....|....*....|....*....|....*....|
gi 21717816 517 WMsshtDFGNINGCYLNYYFFLLAAIQGATLLLFLIISVK 556
Cdd:cd06175 387 AH----IADDLNKGVLTNFFFLLAVLAALNFLIFLLVSRK 422
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
146-518 1.43e-100

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 310.02  E-value: 1.43e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   146 PDAAARCCSPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTG 225
Cdd:pfam00854  24 PSLRPPVHVALFFIGLALIALGTGGIKPNVSSFGGDQFEETDPRRRSRFFSIFYFSINAGSLISTIITPYLQQNYGYPLG 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   226 YAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSCCSQKRsgeRQSNGEGIGVFQQ----SSKQSLFDSCKM 301
Cdd:pfam00854 104 FGLPAVGMIIALLVFLLGSRMYKKKPPKGNVLTKVFKVLPVAAWNKVK---LNGSSAGIKKLHWldwaRELDALIILGIV 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   302 SHGGPF----TEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLripeisNITTTPHTLPAAWLTMFDAVLI 377
Cdd:pfam00854 181 VPGIFFniwcTKTKVEEVKRLLRVLPLFLPLIMFWALYDQMGTSWVLQARTM------NRKIGSFEIPPAQFQAFNAILV 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   378 LLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKEKTINQTignvvyhaADLSLWWQVPQ 457
Cdd:pfam00854 255 LIFIPIFDRLVYPLGRKCTGGLTPLQKMAVGLFLASLAFAIAAIVQLKRNDTGPEFPIAQE--------VPISVLWLIPQ 326
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 21717816   458 YLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV-----SIKAIGWM 518
Cdd:pfam00854 327 YLLIGFGELFISIGGLEFFYKLAPKSMTSLITGLFLLTNALGNFLSGVIATLTakptnVLGAYGWL 392
MFS_NPF cd17351
Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant ...
40-554 2.96e-82

Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340909 [Multi-domain]  Cd Length: 445  Bit Score: 264.48  E-value: 2.96e-82
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  40 VLLTELLERAAFYGITSNLVLFLNGaPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLa 119
Cdd:cd17351   4 ILGNEFAERLAFYGIAVNLVTYLTK-VMHLSNAKAANTVTNFSGTSYLTPLLGAFLADAYLGRYWTIAIFSVIYLVGLI- 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 120 fpLLAAPATRAALcgsarllnctAPGPDAAARCCSPAT-------FAGLVLVGLGVATVKANITPFGADQVKDRGPEATR 192
Cdd:cd17351  82 --LLTLSASVPSL----------RPPPCNPDSPCEPASstqltvlYVGLYLIALGTGGIKPCVSAFGADQFDETDPKEKK 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 193 ---RFFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGqsvfitkppdgsafTDMFKiltyscc 269
Cdd:cd17351 150 qkpSFFNWFYFSINLGSLLAVTLVVYIQDNVSWGWGFGIPAAAMALAVIVFVAG--------------TPFYR------- 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 270 sqkrsgerqsngegigvfqqsskqslfdsckmshggpfteekveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHL 349
Cdd:cd17351 209 --------------------------------------------EVKCLLRLLPIWATTILLSTVYAQMQTFFVQQGLTM 244
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 350 ripeisNITTTPH-TLPAAWLTMFDAVLILLLIPLKDKLVDPILRR-----HGLlpSSLKRIAVGMFFVMCSAFAAGILE 423
Cdd:cd17351 245 ------DRRLGGSfEIPAASLSVFSTLFVLLFIPLYDRVFVPFARRytgnpRGI--TPLQRIGIGLVLSILAMAVAALVE 316
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 424 SKRLNLVKEKTINQTIGNVVyhaaDLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVG 503
Cdd:cd17351 317 VKRLRVARAHGLLDSPTGVV----PMSVFWLLPQYFLLGLAEVFTYIGQLEFFYDEAPDGMRSLGTALFLLTIALGNFLS 392
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|.
gi 21717816 504 SGLLALVSIKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLFLIIS 554
Cdd:cd17351 393 SALVTIVNKITGKGGGPGWLPNNLNKGRLDYFYWLLAVLSAVNFLVFLVCA 443
MFS_NPF5 cd17417
NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The ...
37-557 5.40e-64

NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF5 includes Arabidopsis thaliana PTR3 (AtPTR3, now named AtNPF5.2), which is a wound-induced peptide transporter that is necessary for defense against virulent bacterial pathogens. NPF5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340975 [Multi-domain]  Cd Length: 452  Bit Score: 216.75  E-value: 5.40e-64
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  37 CGAVLLTELLERAAFYGITSNLVLFLNGaPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLG 116
Cdd:cd17417   4 CSFIIGIEVAERFAYYGIASNLVTYLTT-PLHQSTARAAKNVNNWSGTATLLPLLGAFVADAYLGRYRTILISSLIYLLG 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 117 MLAFPLLA-APATRAALCGSArllnctapgpdaaarcCSPAT-------FAGLVLVGLGVATVKANITPFGADQVKDRGP 188
Cdd:cd17417  83 LVLLTLSAsLPSLKPPECNGT----------------CSKAStlqvaffFFSLYLVAIGQGGHKPCVQAFGADQFDEDDP 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 189 -EATRR--FFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQsvfitkppdgsaftdmfkilt 265
Cdd:cd17417 147 kEKKQKssFFNWWYFSICAGSLTAVTVLVYIQDNVGWALGFGIPTIVMALALFVFLLGT--------------------- 205
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 266 ysccsqkrsgerqsngegigvfqqsskqslfdsckmshggPFTEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQ 345
Cdd:cd17417 206 ----------------------------------------PLYRYKVEEVKLVLRLIPIWFTTLVFTVVFAQSPTFFTKQ 245
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 346 SLHLripeisNITTTPH-TLPAAWLTMFDAVLILLLIPLKDKLVDPILRR-----HGLlpSSLKRIAVGMFFVMCSAFAA 419
Cdd:cd17417 246 GVTM------DRTIGPNfKIPPASLQSFITLSILISIPIYDRVFVPIARKitgnpRGI--TLLQRIGIGMFLSILAMVIA 317
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 420 GILESKRLNLVKEKTINQTIGNVvyhaaDLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVG 499
Cdd:cd17417 318 ALVEMKRLKVAKEHGLISPKATV-----PMSIFWLLPQYILLGIADVFTMVGMQEFFYDQVPDEMRSLGTALYLSVFGVG 392
                       490       500       510       520       530       540
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 21717816 500 SFVGSGLLALV-----SIKAIGWMSShtdfgNINGCYLNYYFFLLAAIQGATLLLFLIISVKY 557
Cdd:cd17417 393 SFLSSFLISIVdkitsSSGGQSWFNN-----NLNRAHLDYFYWLLAVLSAVNFVLFLFVAKSY 450
MFS_NPF8 cd17418
NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The ...
37-557 4.43e-63

NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF8 contains the Arabidopsis dipeptide transporters AtNPF8.1 (PTR1), AtNPF8.2 (PTR5), and AtNPF8.3 (PTR2), as well as tonoplast-localized transporters AtNPF8.4 (PTR4) and AtNPF8.5 (PTR6). Oryza sativa NRT1 (now called OsNPF8.9) is a low-affinity nitrate transporter. NPF8 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340976 [Multi-domain]  Cd Length: 447  Bit Score: 213.87  E-value: 4.43e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  37 CGAVLLTELLERAAFYGITSNLVLFLNgAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLG 116
Cdd:cd17418   4 CPFILGNECCERLAYYGIATNLITYLT-KELHQGNVSAANNVTNWSGTCYITPLIGAFIADAYWGRYWTIASFSAIYFIG 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 117 MLAFPLLAA-PATRAALCGSArlLNCTAPGPDAAArccspaTFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRR-- 193
Cdd:cd17418  83 MVLLTLSASvPGLKPASCIGS--LCPPATSVQYAV------FFLGLYLIALGTGGIKPCVSSFGADQFDDTDPKEKVRks 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 194 -FFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQsvfitkppdgsaftdmfkiltysccsqk 272
Cdd:cd17418 155 sFFNWFYFSINIGALISSSVLVWIQENVGWGWGFGIPTVFMGIAIVSFFFGT---------------------------- 206
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 273 rsgerqsngegigvfqqsskqslfdsckmshggPFTEEkvedVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLrip 352
Cdd:cd17418 207 ---------------------------------PLYRE----VKILIRLLPIWASGIVFATVYSQMSTMFVQQGRTM--- 246
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 353 eisNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLP---SSLKRIAVGMFFVMCSAFAAGILESKRLNL 429
Cdd:cd17418 247 ---DRMGGNFEIPPASLSLFDTLSVLIWVPIYDRFIVPLVRKFTGHErgfTQLQRMGIGLFISVLSMVAAAIVEIVRLQL 323
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 430 VKEKTINQTIGNVvyhaaDLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLAL 509
Cdd:cd17418 324 ARTHNLVESGPPV-----PMSIFWQIPQYFLIGAAEVFTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSLIVTL 398
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|...
gi 21717816 510 V-----SIKAIGWMSShtdfgNINGCYLNYYFFLLAAIQGATLLLFLIISVKY 557
Cdd:cd17418 399 VtyvttKGGKPGWIPD-----NLNNGHLDYFFWLLASLSFLNILVYLWIAKRY 446
MFS_NPF6 cd17413
NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The ...
40-554 2.36e-62

NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter 1/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF6 includes the first identified member of the NRT1/PTR family: Arabidopsis thaliana NRT1.1, now called AtNPF6.3. It is a dual affinity nitrate influx transporter and a nitrate sensor. It also transports auxin and has nitrate efflux activity. NPF6 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340971 [Multi-domain]  Cd Length: 457  Bit Score: 212.31  E-value: 2.36e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  40 VLLTELLERAAFYGITSNLVLFLNGApFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 119
Cdd:cd17413   7 ILGIEMCERLTTLGIGVNLVTYLTGT-MHLPSATSANIVTNFLGTSFLLCLLGGFIADTFLGRYLTIAIFASIQALGVLV 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 120 FPLLAA-PATRAALCGSARLLNCT-APGPDAAArccspaTFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRR---F 194
Cdd:cd17413  86 LTLSTTlPSLRPPPCNHTTSHHCEpASGIQLTV------LYLALYLIALGTGGIKSSVSGFGSDQFDENDPKERKLmsyF 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 195 FNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAftdmfkiltysccsqkrs 274
Cdd:cd17413 160 FNRFFFCISVGSLLAVTVLVYIQDNVGRGWGYGICAAAMVLAIVVFLAGTKRYRFKKSIGST------------------ 221
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 275 gerqsngegigvfqqsskqslfdsckmshggpfteeKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEI 354
Cdd:cd17413 222 ------------------------------------QVEEVKMVVRMLPIWATTILFWTVYAQMTTFSVEQAETMDRNIG 265
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 355 SnitttpHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRR-----HGLlpSSLKRIAVGMFFVMCSAFAAGILESKRLNL 429
Cdd:cd17413 266 S------FEIPPASMAVFLVATILLTTAVYDRVIVPLCRKltghpQGL--TTLQRIGVGLVFSCLAMAVAALVELKRLRI 337
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 430 VKEKTINQTIgnvvyhaADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLAL 509
Cdd:cd17413 338 AHAHGKPVKT-------VPMSVFWLVPQYFLVGAGEAFIYTGQLDFFIRESPKGMKSMSTGLFLSTLSLGFFVSSFLVSI 410
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|
gi 21717816 510 V-----SIKAIGWMSShtdfgNINGCYLNYYFFLLAAIQGATLLLFLIIS 554
Cdd:cd17413 411 VnrvtgKSHPHGWLAD-----NLNKGRLDYFYWLLAVLSALNFVIFLVFA 455
MFS_NPF7 cd17419
NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The ...
40-555 3.10e-56

NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF7 includes the nitrate transporters AtNPF7.2 and AtNPF7.3, as well as the dipeptide transporter OsNPF7.3. AtNPF7.3 is a bidirectional transporter involved in nitrate influx and efflux. NPF7 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340977 [Multi-domain]  Cd Length: 447  Bit Score: 195.67  E-value: 3.10e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  40 VLLTELLERAAFYGITSNLVLFLNGApFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 119
Cdd:cd17419   7 ILVNQGLATLAYFGVGVNLVLYLTRV-MHQSNASAANNVSNWTGTVYITPLIGAFLSDSYWGRYWTSTLFQAIFVIGLLL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 120 FPLLAA-PATRAALCGSaRLLNCTAPGPDAAArccspATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRR---FF 195
Cdd:cd17419  86 LTLSSAlPSLRPPQCGD-GDLKCPPASAAQTT-----FLYFSLYLIALGYGGYQPCIATLGADQFDDEDPIEKASksaFF 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 196 NWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQsvfitkppdgsaftdmfkiltysccsqkrsg 275
Cdd:cd17419 160 SYFYQALNLGSLFSNTILVYFEDNGSWGLGFGISAGAAFIGLVLFLAGT------------------------------- 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 276 erqsngegigvfqqsskqslfdsckmshggPFTEEkvedVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSlhlripEIS 355
Cdd:cd17419 209 ------------------------------PFYRE----VKCILRLLPIWLSTIIYSVVYTQMATLFVEQG------AAM 248
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 356 NITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRR---HGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKE 432
Cdd:cd17419 249 DTSFGNFKIPPASMSVFEILSVAVGTVLYRKFLVPLLRKvtgHPKGITELQRMGIGLVIGILAMVVAALVEIQRLKVARP 328
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 433 KTINQTIGNVvyhaaDLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV-- 510
Cdd:cd17419 329 SNLDDPTSPS-----PLSIFWQIPQYVLVGASEVFTYVGQLEFFYDQAPDGLRSLGSALCMASVALGNYLSSLLVTIVnk 403
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*...
gi 21717816 511 ---SIKAIGWMSShtdfgNINGCYLNYYFFLLAAIQGATLLLFLIISV 555
Cdd:cd17419 404 vttKDGSPGWIPD-----NLNKGHLDRFYWLLAALSGIDFVVFLICAK 446
MFS_NPF1_2 cd17416
NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; ...
43-557 4.67e-56

NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF1 includes Medicago truncatula LATD/NIP, now named MtNPF1.7, which is a high-affinity nitrate transporter and is involved in nodulation and root architecture. NPF2 members are well-established nitrate and glucosinolate transporters, including Arabidopsis nitrate influx and efflux transporters with varied tissue and developmental specificity. Examples are AtNPF2.7, which is expressed in the cortex of mature roots, and AtNPF2.9, which is expressed in root companion cells where it is involved in phloem loading. NPF1/2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340974 [Multi-domain]  Cd Length: 444  Bit Score: 195.18  E-value: 4.67e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  43 TELLERAAFYGITSNLVLFLNgAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPL 122
Cdd:cd17416   7 NETGEKLASYGLLANLIVYLI-EEYNMKSIAAANIINIWSGTTNFLPVVGAFLSDSYFGRFPTISVGSFASLLGMVLLTL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 123 LAA-PATRAALCGSARLLnCTAPGPDAAArccspATFAGLVLVGLGVATVKANITPFGADQVKDR---GPEATRRFFNWF 198
Cdd:cd17416  86 TAAiPSLRPPPCETASSL-CQSPSKLQLA-----VLYSALALLSIGAGGIRPCSLAFGADQFDKKtesGKRGLESFFNWY 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 199 YWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFitkppdgsaftdmfkiltysccsqkrsgerq 278
Cdd:cd17416 160 YFTFTVAQIISLTAIVYIQDNVSWKIGFGIPAALMLLSFILFLAGSRLY------------------------------- 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 279 sngegigvfqqsskqslfdsckmshggpfteeKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIpeisniT 358
Cdd:cd17416 209 --------------------------------VVEDLKSLIRVIPIWSTGIILSLAMAQQMSLTVLQALVMDR------H 250
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 359 TTPH-TLPAAWLTMFDAVLILLLIPLKDKLVDPILRR---HGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVkekt 434
Cdd:cd17416 251 LGPSfQIPAGSITVFLLITLTIFIPLYDRVLVPLLRKitgRGRGLTLLQRVGIGIVFSILSMAVAAIVERKRRKTA---- 326
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 435 INQTIGNVvyhaaDLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALV---- 510
Cdd:cd17416 327 LTQGNGTS-----PMSVLWLVPQLVLMGIAEAFHFIGQIEFFYQEFPESMRSTATSLFSLGMGVASYLSSALISAVhrtt 401
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*...
gi 21717816 511 -SIKAIGWMSShtdfgNINGCYLNYYFFLLAAIQGATLLLFLIISVKY 557
Cdd:cd17416 402 gRGGGGSWLPD-----DINKGRLDYVYWLLAGLGALNLGYFLVCSWRY 444
MFS_SLC15A1_2_like cd17347
Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily ...
43-557 3.89e-52

Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily transporters; Solute carrier family 15 member 1 (SLC15A1) and SLC15A2 are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1, or peptide transporter 1 (PepT1), is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. SLC15A2, or peptide transporter 2 (PepT2), is abundantly expressed in the apical membrane of kidney proximal tubules and is also referred to as the renal isoform. Both proteins transport di/tripeptides, but not tetrapeptides or free amino acids, using the energy generated by an inwardly directed transmembrane proton gradient. The SLC15A1/SLC15A2-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340905 [Multi-domain]  Cd Length: 427  Bit Score: 183.97  E-value: 3.89e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  43 TELLERAAFYGITSNLVLFLNGApFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLafpL 122
Cdd:cd17347  10 NEFCERFSYYGMRAILVLYLTDF-LGFSEAEATAIYHSFVMLCYFFPLLGAIIADSYLGKYRTILYLSLVYCLGHI---V 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 123 LAAPATRAALCGSARLLnctapgpdaaarccspatFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSI 202
Cdd:cd17347  86 LAVTAIPPLGPPHVWGL------------------LIGLLLIAIGTGGIKPCVSAFGGDQFGADQQHLLARFFSWFYFAI 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 203 NLGAILSLGGIAYIQQNVSFVTGY------AIPTVCVGLAFVVFLCGQSVFItkppdgsaftdmfkiltysccsqkrsge 276
Cdd:cd17347 148 NAGSLLSTFLTPILRADVQFGGHDcyplafGVPGVLMAVATLVFWLGRKHYK---------------------------- 199
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 277 rqsngegigvfqqsskqslfdsckmshggpfteekveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLripeisN 356
Cdd:cd17347 200 -------------------------------------DVKALLRVLVLFIPLPVFWALFDQQGSRWTLQAEQM------D 236
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 357 ITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESK-RLNLVKEKTI 435
Cdd:cd17347 237 GLVGGFTILPDQMQALNPILILILIPLFDYVIYPLLERCGIPLTPLRKMGVGMILAALAFVIAGFLQLRiDGGLPGQPDP 316
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 436 NQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLffffsgvgsfvgsgllalvsikai 515
Cdd:cd17347 317 GEVTTFEDIEPNSVSILWQLPQYVVLTAGEVLFSITGLEFAYTQAPKSMKSVVQAA------------------------ 372
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|.
gi 21717816 516 gWMSShTDFGNINGCYLNY---------YFFLLAAIQGATLLLFLIISVKY 557
Cdd:cd17347 373 -WLLT-VALGNLIVVIVAEliqfssqaaEYFFFAGLMLVVAVVFALLARFY 421
MFS_NPF4 cd17414
NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The ...
40-551 4.50e-51

NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. Members of the NPF4 subfamily have been shown to transport ABA. NPF4 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340972 [Multi-domain]  Cd Length: 456  Bit Score: 182.22  E-value: 4.50e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  40 VLLTELLERAAFYGITSNLVLFL----NGAPfcwegAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLL 115
Cdd:cd17414   7 VLVVEALENMAYLANANNLVTYLinnmHYSL-----AKSANIVTNFVGTAFLLALLGGFLSDSFLSSFKTIIIFGSIELL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 116 GMLAFPLLAA-PATRAALCGSARLLNCTAPGPDAAArccspATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRR- 193
Cdd:cd17414  82 GLILLTVQAHiPSLQPPSCNSLGDLTCKEPSGSQAA-----ILFVGLYLVALGVGCIKPNLPSHGADQFDENDPKGRRQl 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 194 --FFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFITKppdgsaftdmfkiltysccsq 271
Cdd:cd17414 157 ssFFNWYYFSFSLGALIAVTLVVWVEENKGWDWGFGVSAAVIAVGILVFVAGTPFYRNK--------------------- 215
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 272 krsgerqsngegigvfqqsskqslfdsckmshggpfteEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRI 351
Cdd:cd17414 216 --------------------------------------TQVEEVKIVLKMLPIFACTIILNCILAQLQTFSVQQGSTMNR 257
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 352 PEISNITTTPHTLPAawltmFDAVLILLLIPLKDKLVDPILRR---HGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLN 428
Cdd:cd17414 258 TKIGSFNIPPASLQA-----IPVIFMLILVPLYDHLLVPFARKitgHESGITHLQRIGIGLVLSTLSMVVAALVETKRKK 332
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 429 LVKEKTINQTIGNVVyhaadLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLA 508
Cdd:cd17414 333 VAVENGLLNSKENLP-----ISIFWIALQFLILGISDMFTAVGLLEFFYTESPSSMRSLGTALTWCSYSFGFYLSSVLVS 407
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....
gi 21717816 509 LV-SIKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLFL 551
Cdd:cd17414 408 VVnKVTGSGGHGGWLLGENLNRDRLDLFYWLLCVLSTINFLNYL 451
MFS_NPF3 cd17415
NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The ...
40-552 3.31e-39

NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF3 is the smallest NPF subfamily and it includes Cucumis sativus nitrite transporter (CsNitr1), now named CsNPF3.2. It functions as a chloroplast nitrite uptake transporter to remove toxic nitrite from the cytosol. NPF3 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340973 [Multi-domain]  Cd Length: 448  Bit Score: 149.14  E-value: 3.31e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  40 VLLTELLERAAFYGITSNLVLFLNgAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 119
Cdd:cd17415   7 IFGNEICERLASVGFHTNLITYLT-LQLHMPLVKAANILTNFNGTASLTPLLGAFIADSFAGRFWTITIGSIIYQLGMVL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 120 FPLlaapatraalcgSARLLNCTAPGPDAAARCCSPAT-------FAGLVLVGLGVATVKANITPFGADQVKDRGPEATR 192
Cdd:cd17415  86 LTI------------SAILPSLRPPPCNGHEVCACQASsaqlsilYLSLLLTALGSGGIRPCVVAFGADQFDESDPKQAK 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 193 R---FFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFItkppdgsaftdmfkiltyscc 269
Cdd:cd17415 154 QtwnFFNWYYFCMGIAILLAVTVIVYIQDNVGWGWGFGIPTIAMAISVIAFVVGSPLYR--------------------- 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 270 sqkrsgerqsngegigvfqqsskqslfdsckmshggpfteekveDVKALVKIVPVFLALIPYWTVYFQmQTTYVLQSlhl 349
Cdd:cd17415 213 --------------------------------------------ELKSIIRMLPIWAAGILLVTASSQ-QHTFSIQQ--- 244
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 350 riPEISNITTTPH-TLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSS---LKRIAVGMFFVMCSAFAAGILESK 425
Cdd:cd17415 245 --ARTMNRHLTPSfQIPPASMSVFGILSLLTTVPLYDRVLMPVARKFTGNERGitfLQRMGIGLFISILATVVAAFVEVK 322
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 426 RlnlvKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSG 505
Cdd:cd17415 323 R----KSVAANHGLLDRPHATVPISVFWLVPQYILHGIAEAFMSIGHLEFFYDQSPESMRSTATALFWSTISLGSYLSTL 398
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*..
gi 21717816 506 LLALVSiKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLFLI 552
Cdd:cd17415 399 LVTLVH-KETSRGGRWWLPNNLNRGRLDYFYWLVAVLQAVNLVYFLI 444
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
42-552 5.17e-35

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 137.64  E-value: 5.17e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  42 LTELLERAAFYGITSNLVLFL----NGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGM 117
Cdd:COG3104  21 FTEMWERFSFYGMRAILVLYLtaslADGGLGLSEADAAAIYGAYTALVYLTPLLGGWLADRLLGQRRAILLGGILMALGH 100
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 118 LafpLLAAPATRAALcgsarllnctapgpdaaarccspatFAGLVLVGLGVATVKANITPF------GADQVKDRGpeat 191
Cdd:COG3104 101 F---LLALPGGVTLF-------------------------YLGLALIAVGNGLFKPNISSLvgqlydPGDPRRDAG---- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 192 rrfFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVF-----ITKPPDGSAFTDMFKILTY 266
Cdd:COG3104 149 ---FTIFYMGINIGAFLAPLLCGYLGEKYGWHYGFGAAAIGMLIGLIIFLLGRKYLgdiglEPDNPLSKKERLIAVALGA 225
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 267 SCCSQKRSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGgpfteEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQS 346
Cdd:COG3104 226 LLLVLVLAGLLSNANIANYLLYVIAIIAYFIFILRSKK-----LTKEERKRLLAILILFLFSIVFWALYEQAGTSLNLFA 300
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 347 LHLRIPEISNItttphTLPAAWLTMFDAVLILLLIPLKDKLVDPiLRRHGLLPSSLKRIAVGMFFVMCS--AFAAGILES 424
Cdd:COG3104 301 DRNVDRSLFGF-----EIPPSWFQSLNPLFIIILAPVFAALWTK-LGKRGKEPSTPTKFALGLLLLGLGflVMALAALLA 374
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 425 KRLNLVkektinqtignvvyhaadlSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLffffsgvgsfvgs 504
Cdd:COG3104 375 GAGGKV-------------------SPLWLVLAYLLLTIGELCLSPVGLSMITKLAPARFAGQMMGL------------- 422
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*....
gi 21717816 505 GLLAL-VSIKAIGWMSSHTDFGNingcYLNYYFFLLAAIQGATLLLFLI 552
Cdd:COG3104 423 WFLATaLGNLLAGLLAGLYAVPG----YTAYFLLLGGIALVAGVVLLLL 467
MFS_PTR2 cd17350
Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide ...
37-491 8.05e-34

Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide transporter or permease PTR2 is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. It is a 12-transmembrane domain (TMD) integral membrane protein that translocates di-/tripeptides. As with other POT family proteins, it displays characteristic substrate multispecificity. PTR2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340908 [Multi-domain]  Cd Length: 438  Bit Score: 133.75  E-value: 8.05e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  37 CGAVLLTELLERAAFYGITSNLVLFLNGAP------FCWEGAQASEALL-LFMGLTYLGSPFGGWLADARLGRARAILLS 109
Cdd:cd17350   4 AFLIAIVELCERFSYYGLTGPFQNYMQFGPddstpgALGLGEQGATGLSnFFTFWCYVTPVIGAYVADQFLGRYNTIVCG 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 110 LALYLLGMLAFPLLAAPatraalcgsarllncTAPGPDAAARCCspatFAGLVLVGLGVATVKANITPFGADQVKDRGPE 189
Cdd:cd17350  84 AVIYFVGILILTCTSIP---------------SVIDAGAGLGGF----VVAIIIIGLGTGGIKSNVSPLIADQLPKIKPY 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 190 ----------------ATRRFFNWFYWSINLGAiLSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFITKPpd 253
Cdd:cd17350 145 vktlkngervivdpvvTLSRIYMIFYWAINVGS-LSLLATTYLERTKGFWYAYLLPLCVFVIPLIILAFGKKFYKIRP-- 221
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 254 gSAFTDMFKiltysccsqkrsgerqsngegigvfqqsskqSLFDSCKmshggpfteekvedvkalvkivpVFLALIPYWT 333
Cdd:cd17350 222 -DLFIDELK-------------------------------RALRACK-----------------------VFLFYPIYWV 246
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 334 VYFQMQTTYVLQSLHLRIpeisnitttpHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVM 413
Cdd:cd17350 247 CYGQMTSNFISQAGQMQL----------HGVPNDLFQAFDSIALIIFIPILENIIYPLLRKYNIPFKPITRITLGFMFAS 316
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 414 CSAFAAGILESK--RLNLVKEKTINQTIGNvvyhaaDLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGL 491
Cdd:cd17350 317 FSMIYAAVLQAKiyQAGPCYANPTGTCSPN------DIHVWIQIPAYVLIAFSEIFASITGLEYAYTKAPPSMKSFITAL 390
MFS_SLC15A5 cd17349
Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute ...
40-554 1.34e-29

Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 5 (SLC15A5) is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. The specific function of SLC15A5 is unknown. SLC15A5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340907 [Multi-domain]  Cd Length: 437  Bit Score: 121.40  E-value: 1.34e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  40 VLLTELLERAAFYGITSNLVLFLNGApFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 119
Cdd:cd17349   7 LLLVELCERFTFFGIVCNMILFCTIK-LGYRNHQAAIVNLCFVGTSTLTPVFVGWLAEECMGRNKLVYICLFLHFLGTAL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 120 FPLLAAPATRAALcGSARLLNCTApgpdaaARCCSPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFY 199
Cdd:cd17349  86 LPVVAFPFEDFYI-DTHHIIHTLA------KREQTLLFYVALLTASLGTGGIRAIVCPLSAYGLQDYGSRKLMSFFNWFY 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 200 WSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVvflcgqsvfitkppdgsaftdmfkiltysccsqkrsgerqs 279
Cdd:cd17349 159 WLVNLNSAVVFVGISYIQQSVAKNLGFLIPFMSVLMALI----------------------------------------- 197
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 280 ngegigvfqqsskqslfdSCKMSHGgpfteeKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHlripeiSNITT 359
Cdd:cd17349 198 ------------------TLHMVRN------DLINTKNLVRLFPLFAFQILYRTCIMQIPSGYYLQTMN------SNLNL 247
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 360 TPHTLPAAWLTMFDAVLILLLIPLKDKLVDPIL--RRHGLLPSSLkrIAVGMFFVMCSAFAAGILESKRLNLVKektINQ 437
Cdd:cd17349 248 GGFLLPIAAMNVISIIPLLILAPFLEYFSSCLFssKRYGPFLSAC--IIAGHLCAALSVMVAGFSEIHRKRFPL---VEQ 322
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 438 TIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIG- 516
Cdd:cd17349 323 TLSGKVLLVSSMPCFQLAPQYVLLGVAEALVTPACSLITFRLVPSSIRGISMHFLTLFNGAGCFMGALLIQLVYLISEGn 402
                       490       500       510
                ....*....|....*....|....*....|....*...
gi 21717816 517 WMSSHTDFGNingcyLNYYFFLLAAIQGATLLLFLIIS 554
Cdd:cd17349 403 WFPNTLNKGN-----LERFFFFLASLMLLNALGFWRIS 435
MFS_SLC15A1 cd17412
Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute ...
40-488 4.22e-23

Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 1 (SLC15A1), also called peptide transporter 1 (PepT1), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A1, as well as SLC15A2, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1 is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. It is a high-capacity/low-affinity transporter that drives the transport of di-and tripeptides for metabolic purposes. It's expression is upregulated in the colon during chronic inflammation associated with inflammatory bowel disease. SLC15A1/PepT1 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340970 [Multi-domain]  Cd Length: 415  Bit Score: 101.84  E-value: 4.22e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  40 VLLTELLERAAFYGITSNLVLFLNGApFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 119
Cdd:cd17412   7 IVVNEFCERFSYYGMRAVLVLYFKYF-LRWDDDLSTAIYHTFVALCYLTPILGAIIADSWLGKFKTIVYLSIVYTIGQAV 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 120 FpllaapatraALCGSARLLNCTAPG-PDAAARCCSpATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWF 198
Cdd:cd17412  86 M----------AVSAIHDLTDANRDGtPDNLTLHVA-LSMIGLLLIALGTGGIKPCVAAFGGDQFEEHQEKQRSRFFSIF 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 199 YWSINLGAILS--LGGIAYIQQ------NVSFVTGYAIPTVCVGLAFVVFLCGQSVFItkppdgsaftdmfkiltysccs 270
Cdd:cd17412 155 YLSINAGSLLStiITPILRSQEcgihskQKCYPLAFGVPAALMVVALIVFILGSKMYK---------------------- 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 271 qkrsgerqsngegigvfqqsskqslfdsckmshggpfteekveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLR 350
Cdd:cd17412 213 -------------------------------------------QIKMVLKVLFLYIPLPMFWALFDQQGSRWTLQATTMD 249
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 351 iPEISNITTTPHTLpaawlTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILEskrlnlv 430
Cdd:cd17412 250 -GNFGAIQIQPDQM-----QTVNPILIIIMVPIFDAVIYPLIKKCKINFTPLRKMTVGMFLAALAFVAAALLQ------- 316
                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 21717816 431 kektinqtignvvyhaadLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAI 488
Cdd:cd17412 317 ------------------IQMAWQIPQYFLLTCGEVVFSVTGLEFSYSQAPSNMKSVL 356
MFS_SLC15A2 cd17411
Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute ...
40-488 1.73e-20

Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 2 (SLC15A2), also called peptide transporter 2 (PepT2), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A2, as well as SLC15A1, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A2 is a high-affinity transporter and is abundantly expressed in the apical membrane of kidney proximal tubules and choroid plexus epithelial cells. It is the major transporter involved in the reclamation of peptide-bound amino acids and peptide-like drugs in the kidney, and is also called the renal isoform. In choroid plexus and the brain, it acts as an efflux transporter and plays a role in regulating peptide/neuropeptide homeostasis. SLC15A2/PepT2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340969 [Multi-domain]  Cd Length: 403  Bit Score: 93.74  E-value: 1.73e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  40 VLLTELLERAAFYGITSNLVL-FLNGapFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGML 118
Cdd:cd17411   7 IVVNEFCERFSYYGMKAVLTLyFLSF--LHWDENLSTAIYHAFSGLCYFTPVLGALIADSWLGKFKTIIYLSIVYVVGHV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 119 -----AFPLLAAPATRAALcgsarllnctapgpdaaarccspaTFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRR 193
Cdd:cd17411  85 iksvgAIPTVGDQQVHVVL------------------------SMIGLFLIALGTGGIKPCVAAFGGDQFEEEHARERSK 140
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 194 FFNWFYWSINLGAILSLGGIAYIQQNVS------FVTGYAIPTVCVGLAFVVFLCGQSVFitkppdgsaftdmfkiltys 267
Cdd:cd17411 141 FFSIFYLSINAGSLISTFVTPILRGDVQcfggdcYALAFGVPAALMVVALVVFIAGSGMY-------------------- 200
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 268 ccsqkrsgerqsngegigvfqqsskqslfdsckmshggpfteekvEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSL 347
Cdd:cd17411 201 ---------------------------------------------KEVKMVTRVLFLYIPLPMFWALFDQQGSRWTLQAT 235
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 348 HLripeisNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVmCSAFAAGIleskrl 427
Cdd:cd17411 236 RM------NDFGGGFVLQPDQMQTLNPLLILVFIPIFDLGIYPLVSKCKINFTSLRKMATGMILA-ALAFAVAA------ 302
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 21717816 428 nlvkektinqtignvvyhAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAI 488
Cdd:cd17411 303 ------------------AVEIKIAWQLPQYVLLSAGEVMFSITGLEFSYSQAPASMKSVL 345
MFS_DtpA_like cd17346
Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily ...
42-556 1.22e-17

Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters; The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340904 [Multi-domain]  Cd Length: 399  Bit Score: 85.32  E-value: 1.22e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  42 LTELLERAAFYGITSNLVLFLN---GAPFcwEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGML 118
Cdd:cd17346   9 FTEMWERFSYYGMRAILILYLTaqlGDGF--SEADAASIYGAYTALVYLTPIIGGWLADKVLGARRTVFIGGILMALGYL 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 119 afpLLAAPATRaalcgsarllnctapgpdaaarccSPATFAGLVLVGLGVATVKANITPF------GADQVKDRGpeatr 192
Cdd:cd17346  87 ---LLALSPFS------------------------VSMLYLGLALIIVGNGLFKPNISSLvgklydENDPRRDSG----- 134
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 193 rfFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQsvfitkppdgsaftdmfkiltysccsqK 272
Cdd:cd17346 135 --FSIFYMGINLGAFLAPLLCGTLGDNYGYHYGFGLAAVGMLLGLLIFLLGR---------------------------K 185
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 273 RSGERQSngegigvfqqsskqslfdsckmshggpfteekvedvkaLVKIVPVFLALIPYWTVYFQMQTtyvlqSLHLRIP 352
Cdd:cd17346 186 KLLERKK--------------------------------------MLAIIILFLFAVVFWAIYEQAGT-----SLALFAD 222
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 353 EISNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVdPILRRHGLLPSSLKRIAVGMFFVMCS----AFAAGILESKRLN 428
Cdd:cd17346 223 ENVDRLLGGFTIPPSWFQSLNPLFIILLAPILAALW-TKLGKRGKDPSIPTKFALGLLLLGLSfllmVLAASFAGGSGKV 301
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 429 lvkektinqtignvvyhaadlSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLffffsgvgsfvgsGLLA 508
Cdd:cd17346 302 ---------------------SALWLVLSYFLQTLGELCLSPVGLSMITKLAPAKFAGFMMGL-------------WFLA 347
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|..
gi 21717816 509 L-VSIKAIGWMSSHTDFGNINGCYLN---YYFFLLAAIQGATLLLFLIISVK 556
Cdd:cd17346 348 SaLGNILAGYLAGFYAQPKDPLASALvytDYFGLIGVIALVAGIILLLLAKK 399
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
51-425 7.99e-17

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 84.04  E-value: 7.99e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816    51 FYGITSNLVL----FLNgapfcWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGML-----AFP 121
Cdd:TIGR00926   3 YYGMRTILVLyflnFLG-----FSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHAllsfgAIP 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   122 LLAAPATRAAlcgsarllnctapgpdaaarccspaTFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWS 201
Cdd:TIGR00926  78 SSGHPLHDLL-------------------------DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFA 132
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   202 INLGAILSLGGIAYIQQNVS-------FVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGS-AFTDMFKILTYSCCSQKR 273
Cdd:TIGR00926 133 INAGSLISTIITPILRGDVGcfgcqdcYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNiVSKVIKCIVTALRKRFST 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   274 SGERQsngegigvfqqssKQSLFDSCKMSHGgpftEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHlRIPE 353
Cdd:TIGR00926 213 RSEHW-------------PLHWLDYAKDKHD----IRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATR-MDGD 274
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 21717816   354 ISNITTTPHTLPAawltmFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESK 425
Cdd:TIGR00926 275 VGGFEIQPDQMQV-----VNPLLILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGLLAALSFFVAALVQLK 341
yjdL_sub1_fam TIGR00924
amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes ...
40-491 4.07e-13

amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273342 [Multi-domain]  Cd Length: 475  Bit Score: 71.79  E-value: 4.07e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816    40 VLLTELLERAAFYGITSNLVLFL-NGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYllgML 118
Cdd:TIGR00924  15 LFFVELWERFSYYGMQGILAVYLvQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL---ML 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   119 AFPLLAAPatraalcgsarllnctaPGPDAaarccspaTFAGLVLVGLGVATVKANITPFGAdQVKDRgPEATRR--FFN 196
Cdd:TIGR00924  92 GHFMLAMS-----------------IYPDL--------IFYGLGTIAVGSGLFKANPSSMVG-KLYER-GDMPRRdgGFT 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   197 WFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFitkpPDGSAFTDMFkiltysccsqkrSGE 276
Cdd:TIGR00924 145 LFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHML----RDIGSVPDPL------------SGQ 208
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   277 RQSNGEGIGVFQQSSKQSLFDSCKMSHG---------------GPFTEE-------KVEDVKALVKIvPVFLALIPYWTV 334
Cdd:TIGR00924 209 GKTYGKLLLALLAALALVFFCAWLMHHVvianillmtvtlaviIFFFRLafkprldAVARNKMYAYI-VLFLEAVVFWVL 287
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   335 YFQMQTTyvlqsLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKdKLVDPILRRHGLLPSSLKRIAVGMFFVMC 414
Cdd:TIGR00924 288 YAQMPTS-----LNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVL-AMIWTRLGRKGKDPTTPLKFTLGMLFCGA 361
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   415 SAFAA----GILESKRLnlvkektinqtignvvyhaadLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMG 490
Cdd:TIGR00924 362 SFLTFaasiWFADAGGL---------------------TSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLG 420

                  .
gi 21717816   491 L 491
Cdd:TIGR00924 421 M 421
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
449-488 2.25e-06

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 50.53  E-value: 2.25e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 21717816   449 LSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAI 488
Cdd:TIGR00926 563 VSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVL 602
PRK15462 PRK15462
dipeptide permease;
40-247 8.01e-06

dipeptide permease;


Pssm-ID: 237971 [Multi-domain]  Cd Length: 493  Bit Score: 48.79  E-value: 8.01e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816   40 VLLTELLERAAFYGITSNLVLFLNGApFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 119
Cdd:PRK15462  14 VVALQIWEYFSFYGMRALLILYLTNQ-LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVV 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  120 FpllaapatraalcgsarllnctapgpdAAARCCSPATFAGLVLVGLGVATVKANITPFGADQVKdrgPEATRR--FFNW 197
Cdd:PRK15462  93 L---------------------------GASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYE---PTDPRRdgGFSL 142
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 21717816  198 FYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVF 247
Cdd:PRK15462 143 MYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHF 192
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
49-241 1.65e-03

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 41.01  E-value: 1.65e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  49 AAFYGITSNLVLFLNGApFCWEGAQASEALLLFMGLTYLGSPFGGWLADaRLGRARAILlslalyllgMLAFPLLAAPAT 128
Cdd:COG2271 194 FALYGFLTWLPTYLVEV-RGLSLAQAGLLLSLPFLAGIVGSLLGGWLSD-RLGRRRKLV---------LAIGLLLAALAL 262
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 129 raalcgsarLLNCTAPGPdaaarccsPATFAGLVLVGLGVATVKANITPFGADQVkdrGPEATRRFFNWFYWSINLGAIL 208
Cdd:COG2271 263 ---------LLLALLPSP--------ALAIALLFLAGFGLGGAFGLLWALAAELF---PKKARGTASGLVNTFGFLGGAL 322
                       170       180       190
                ....*....|....*....|....*....|...
gi 21717816 209 SLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFL 241
Cdd:COG2271 323 GPLLVGYLLDATGYQAAFLLLAALALLAALLAL 355
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
40-241 5.55e-03

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 39.13  E-value: 5.55e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816  40 VLLTELLERAAFYGITSNLVLFLNGAPFcWEGAQASEALLLFMGLTYLGSPFGGWLADaRLGRARAILLSLALYLLGMLA 119
Cdd:cd17329   4 LLIGSFLNRLGFFMVWPFMAIYLHQQLG-LSASIVGLVLALSAVAGIVASLIGGRLAD-RFGRKPVMLAGLLLRALGFAL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21717816 120 FPLLAAPatraalcgsarllnctapgpdaaarccsPATFAGLVLVGLGVATVKANITPFGADQVKdrgPEATRRFFNWFY 199
Cdd:cd17329  82 LGFAHSP----------------------------WLFAIALVLTGFGGGLFEPASEAMIADVTT---PENRTRAFSLLY 130
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 21717816 200 WSINLGAILS--LGGIAYiqqNVSFVTGYAIPTVCVGLAFVVFL 241
Cdd:cd17329 131 WAINLGVAIGplLGGLLL---LYSFRLLFLAAAVLFLLAALVLL 171
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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