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Conserved domains on  [gi|281365006|ref|NP_652574|]
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uncharacterized protein Dmel_CG15283 [Drosophila melanogaster]

Protein Classification

succinate dehydrogenase assembly factor 4( domain architecture ID 10545897)

succinate dehydrogenase assembly factor 4 is essential in the assembly of succinate dehydrogenase (SDH), a component of the tricarboxylic acid cycle and the mitochondrial electron transport chain

Gene Ontology:  GO:0045333|GO:0008047|GO:0034552
PubMed:  24954416

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1674 pfam07896
Protein of unknown function (DUF1674); The members of this family are sequences derived from ...
 81-126 1.37e-18

Protein of unknown function (DUF1674); The members of this family are sequences derived from hypothetical eukaryotic and bacterial proteins. The region in question is approximately 60 residues long.


:

Pssm-ID: 429724  Cd Length: 50  Bit Score: 73.12  E-value: 1.37e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 281365006   81 HPAHEKEPLKPWPNNTNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 126
Cdd:pfam07896   5 RPAAAAKPAPEFEGDVNPKTGEIGGPKGPEPTRYGDWEYKGRVSDF 50
 
Name Accession Description Interval E-value
DUF1674 pfam07896
Protein of unknown function (DUF1674); The members of this family are sequences derived from ...
 81-126 1.37e-18

Protein of unknown function (DUF1674); The members of this family are sequences derived from hypothetical eukaryotic and bacterial proteins. The region in question is approximately 60 residues long.


Pssm-ID: 429724  Cd Length: 50  Bit Score: 73.12  E-value: 1.37e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 281365006   81 HPAHEKEPLKPWPNNTNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 126
Cdd:pfam07896   5 RPAAAAKPAPEFEGDVNPKTGEIGGPKGPEPTRYGDWEYKGRVSDF 50
COG5508 COG5508
Uncharacterized conserved protein, DUF1674 domain [Function unknown];
70-126 1.32e-13

Uncharacterized conserved protein, DUF1674 domain [Function unknown];


Pssm-ID: 444259  Cd Length: 61  Bit Score: 60.73  E-value: 1.32e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 281365006  70 APLEPLPECAPHPAHEKEPLKPWPNNTNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 126
Cdd:COG5508    5 APAKPLPPAAQRALAEAEARRAAAEADAELPKEIGGRDGPEPTRYGDWEKKGRAIDF 61
 
Name Accession Description Interval E-value
DUF1674 pfam07896
Protein of unknown function (DUF1674); The members of this family are sequences derived from ...
 81-126 1.37e-18

Protein of unknown function (DUF1674); The members of this family are sequences derived from hypothetical eukaryotic and bacterial proteins. The region in question is approximately 60 residues long.


Pssm-ID: 429724  Cd Length: 50  Bit Score: 73.12  E-value: 1.37e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 281365006   81 HPAHEKEPLKPWPNNTNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 126
Cdd:pfam07896   5 RPAAAAKPAPEFEGDVNPKTGEIGGPKGPEPTRYGDWEYKGRVSDF 50
COG5508 COG5508
Uncharacterized conserved protein, DUF1674 domain [Function unknown];
70-126 1.32e-13

Uncharacterized conserved protein, DUF1674 domain [Function unknown];


Pssm-ID: 444259  Cd Length: 61  Bit Score: 60.73  E-value: 1.32e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 281365006  70 APLEPLPECAPHPAHEKEPLKPWPNNTNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 126
Cdd:COG5508    5 APAKPLPPAAQRALAEAEARRAAAEADAELPKEIGGRDGPEPTRYGDWEKKGRAIDF 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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