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Concise Results
Standard Results
Full Results
Su(var)2-HP2, isoform A [Drosophila melanogaster]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
PTZ00108 super family
cl36510 DNA topoisomerase 2-like protein; Provisional
1132-1374
7.94e-05
DNA topoisomerase 2-like protein; Provisional
PTZ00108 :Pssm-ID: 240271 [Multi-domain]
Cd Length: 1388
Bit Score: 48.89
E-value: 7.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1132 MRP K CTLET Q QS --- DPVT A KNK R NSGRLSRKE K SVINA A KSE K DK S PSAI S QSTERKQLLNENPSKKD KK TEQ SG NKK E 1208
Cdd:PTZ00108 1147 VEE K EIAKE Q RL ksk TKGK A SKL R KPKLKKKEK K KKKSS A DKS K KA S VVGN S KRVDSDEKRKLDDKPDN KK SNS SG SDQ E 1226
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1209 AVVGPLD K TET SS S --- TNIIDKK S NE S F D SAMQP SD R L NQKESAFTKLSSI S SPKKIMKDQD K DL D alskg G D SN PTIR 1285
Cdd:PTZ00108 1227 DDEEQKT K PKK SS V krl KSKKNNS S KS S E D NDEFS SD D L SKEGKPKNAPKRV S AVQYSPPPPS K RP D ----- G E SN GGSK 1301
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1286 DTGEDSRQTD K KHQENDTKHEEEDS S KL K ANIDETKSSSE K D A epis KD S SQDSAKP R LS K P KS RNKRKKNEKKPN D SIA 1365
Cdd:PTZ00108 1302 PSSPTKKKVK K RLEGSLAALKKKKK S EK K TARKKKSKTRV K Q A ---- SA S QSSRLLR R PR K K KS DSSSEDDDDSEV D DSE 1377
....*....
gi 24653671 1366 ES D I E GGFQ 1374
Cdd:PTZ00108 1378 DE D D E DDED 1386
PTZ00449 super family
cl33186 104 kDa microneme/rhoptry antigen; Provisional
739-1091
2.00e-04
104 kDa microneme/rhoptry antigen; Provisional
PTZ00449 :Pssm-ID: 185628 [Multi-domain]
Cd Length: 943
Bit Score: 47.38
E-value: 2.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 739 VSVTSV Q GE Q N pviei V K E L EQETISEVV P AQNDQ S SVE D QT lad K E N P VEKPS P V KAP ----- SSSKD E PPA E ENL P AP 813
Cdd:PTZ00449 474 TRISKI Q FT Q E ----- I K K L IKKSKKKLA P IEEED S DKH D EP --- P E G P EASGL P P KAP gdkeg EEGEH E DSK E SDE P KE 545
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 814 DQD P I E QQKTP V A K NQQHD KEH NE apkaeslsv S D IP SS S VT P S -- K KRN H SSPANT PKK S K EIEAL Q SSVPRRALRSDK 891
Cdd:PTZ00449 546 GGK P G E TKEGE V G K KPGPA KEH KP --------- S K IP TL S KK P E fp K DPK H PKDPEE PKK P K RPRSA Q RPTRPKSPKLPE 616
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 892 AT -- P QNLRESR S KRTL K TELT llmdd TM R R SSP RLGRS P AESH S S he RS P MEK K VTVSKLA K DLITI D KEKE ielkslp 969
Cdd:PTZ00449 617 LL di P KSPKRPE S PKSP K RPPP ----- PQ R P SSP ERPEG P KIIK S P -- KP P KSP K PPFDPKF K EKFYD D YLDA ------- 682
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 970 d A SET K DV K I T KTTTA S DT SIL TDEN P SSSK T EMKKLKGK P L K AKKMSRTSETEVKKAI A DSNE DI psifsikcve E HL T 1049
Cdd:PTZ00449 683 - A AKS K ET K T T VVLDE S FE SIL KETL P ETPG T PFTTPRPL P P K LPRDEEFPFEPIGDPD A EQPD DI ---------- E FF T 751
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 24653671 1050 SS E S E QKDEK E E l LCPK P QI D CT n TDLEQSTA I ETD T EQVE E 1091
Cdd:PTZ00449 752 PP E E E RTFFH E T - PADT P LP D IL - AEEFKEED I HAE T GEPD E 791
PspC_subgroup_1 super family
cl41462 pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
503-842
1.57e-03
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
NF033838 :Pssm-ID: 468201 [Multi-domain]
Cd Length: 684
Bit Score: 44.23
E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 503 ME E KSANCRDG E G E P VK RKRGR PR K iip K E EA K T A ETENTIESLNTNVPLS I D T SK E NP E T E t VNLEVPI K QD E L V SDLD 582
Cdd:NF033838 178 IA E SDVEVKKA E L E L VK EEAKE PR D --- E E KI K Q A KAKVESKKAEATRLEK I K T DR E KA E E E - AKRRADA K LK E A V EKNV 253
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 583 NAK E ltgstnlp QD DIEMASNHQETDLKCA PD RVAL D KSE S TPK V E EE Q L ckvdt PS DTALD E S KV S E SA K NHI E LED K D 662
Cdd:NF033838 254 ATS E -------- QD KPKRRAKRGVLGEPAT PD KKEN D AKS S DSS V G EE T L ----- PS PSLKP E K KV A E AE K KVE E AKK K A 320
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 663 KD - KEE TQKES P NGNS K etnensviv T N E V E LP akkaeakaeagnive ESD SQLA E dfkl AE EI L AA E VG K GVE a NE VSV 741
Cdd:NF033838 321 KD q KEE DRRNY P TNTY K --------- T L E L E IA --------------- ESD VKVK E ---- AE LE L VK E EA K EPR - NE EKI 371
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 742 TSVQGEQNPVIEIVKE LE QETISEVVPAQNDQSSVEDQTLA d KE N P V E K P S P VK AP SSS K DE P PA E E nlpapdqd P I EQ Q 821
Cdd:NF033838 372 KQAKAKVESKKAEATR LE KIKTDRKKAEEEAKRKAAEEDKV - KE K P A E Q P Q P AP AP QPE K PA P KP E K -------- P A EQ P 442
330 340
....*....|....*....|.
gi 24653671 822 K TPVAKN QQ hd K E HNE A PKA E 842
Cdd:NF033838 443 K AEKPAD QQ -- A E EDY A RRS E 461
PRK05901 super family
cl35405 RNA polymerase sigma factor; Provisional
1624-1822
4.17e-03
RNA polymerase sigma factor; Provisional
PRK05901 :Pssm-ID: 235640 [Multi-domain]
Cd Length: 509
Bit Score: 42.67
E-value: 4.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1624 KR T PTSSLPTNSR K SIF KK TP AKSK RLTK I LESME K TPSREPSV slgev N P DSDPVAAESVAVLHESDR D LESNE IP NEE 1703
Cdd:PRK05901 4 AS T KAELAAEEEA K KKL KK LA AKSK SKGF I TKEEI K EALESKKK ----- T P EQIDQVLIFLSGMVKDTD D ATESD IP KKK 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1704 VFEDTEE A S A EDTDN K LK K K E D D HELEV n DICA A SKNPITDDST KD ASSNKST D S D VLQETK D E L SNSL I NATQGEDTPI 1783
Cdd:PRK05901 79 TKTAAKA A A A KAPAK K KL K D E L D SSKKA - EKKN A LDKDDDLNYV KD IDVLNQA D D D DDDDDD D D L DDDD I DDDDDDEDDD 157
170 180 190
....*....|....*....|....*....|....*....
gi 24653671 1784 KELTEEE V PNNKTVED E S K KQ E I L K D LEPDNAALEEDT A 1822
Cdd:PRK05901 158 EDDDDDD V DDEDEEKK E A K EL E K L S D DDDFVWDEDDSE A 196
PTZ00121 super family
cl31754 MAEBL; Provisional
1671-2360
7.43e-03
MAEBL; Provisional
PTZ00121 :Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.44
E-value: 7.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1671 E VNPDS D PVA AE S V AVLH E SDR D L E ---- SN E IP N E E VFEDT EEA SAEDTDNKLKKKEDDHELEVNDICA A SKNPIT D DS 1746
Cdd:PTZ00121 1216 E ARKAE D AKK AE A V KKAE E AKK D A E eakk AE E ER N N E EIRKF EEA RMAHFARRQAAIKAEEARKADELKK A EEKKKA D EA 1295
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1747 T K DASSN K STDSDVLQ E TK --- DE LSNSLIN A TQGE D TPI K ELT E EEVPNNKTVEDESKKQEILKDL E PDNA A L E EDTAS 1823
Cdd:PTZ00121 1296 K K AEEKK K ADEAKKKA E EA kka DE AKKKAEE A KKKA D AAK K KAE E AKKAAEAAKAEAEAAADEAEAA E EKAE A A E KKKEE 1375
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1824 TA K A A EEMDLYIK EK SNVKSVLAEP E T D VTDDE EL AQS pipns SETTSVT D DPEPSTSSVV K - RSLR K READSSQP DEA A 1902
Cdd:PTZ00121 1376 AK K K A DAAKKKAE EK KKADEAKKKA E E D KKKAD EL KKA ----- AAAKKKA D EAKKKAEEKK K a DEAK K KAEEAKKA DEA K 1450
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1903 K RKQRQDVEKSLTG K K E QV K P A RRRQLAEV E ERPSLKRS K TES EAK ST vqgkyisiignetim SSTTAPIR E TNRE A AST 1982
Cdd:PTZ00121 1451 K KAEEAKKAEEAKK K A E EA K K A DEAKKKAE E AKKADEAK K KAE EAK KK --------------- ADEAKKAA E AKKK A DEA 1515
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1983 SPSARKSAVQ EAK HV E T tkhiilgppg K K LLHSDSP A A E V KK pmvqtllss TLS L Q K PST L DDGSPL K IRKSL KK SIA D E 2062
Cdd:PTZ00121 1516 KKAEEAKKAD EAK KA E E ---------- A K KADEAKK A E E K KK --------- ADE L K K AEE L KKAEEK K KAEEA KK AEE D K 1576
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2063 N I dgdqsifssssvlnkntsvv A P RK VNI svs LLQSKDTQV E TAASSS E TPILT K K E KL K TQKST K - K P E GN KK T E SK KK 2141
Cdd:PTZ00121 1577 N M -------------------- A L RK AEE --- AKKAEEARI E EVMKLY E EEKKM K A E EA K KAEEA K i K A E EL KK A E EE KK 1633
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2142 SLV Q gpqm KTQ K SE E AVSGPKI L N K yl KS E TESSRKTVSTVTGRKQIGQL E VL KK P E S -- R K SE E S L V - EA ISR KK QSQV 2218
Cdd:PTZ00121 1634 KVE Q ---- LKK K EA E EKKKAEE L K K -- AE E ENKIKAAEEAKKAEEDKKKA E EA KK A E E de K K AA E A L K k EA EEA KK AEEL 1707
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2219 QRLSKIDGR K S E gtslp QPDVSKS E TAL KA - ALP KE T E FPVQD A ei E KMS K GRGHQNAVKNT K T E QP K SKP kt E V R SLQA 2297
Cdd:PTZ00121 1708 KKKEAEEKK K A E ----- ELKKAEE E NKI KA e EAK KE A E EDKKK A -- E EAK K DEEEKKKIAHL K K E EE K KAE -- E I R KEKE 1778
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2298 EAAT E LM D SM D SQSDVS --- D I RAT F PESQG I FNVPGHMTRA I SSNRSLAPTPTP ---- MSDS Q RNASKE 2360
Cdd:PTZ00121 1779 AVIE E EL D EE D EKRRME vdk K I KDI F DNFAN I IEGGKEGNLV I NDSKEMEDSAIK evad SKNM Q LEEADA 1848
Name
Accession
Description
Interval
E-value
PTZ00108
PTZ00108 DNA topoisomerase 2-like protein; Provisional
1132-1374
7.94e-05
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain]
Cd Length: 1388
Bit Score: 48.89
E-value: 7.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1132 MRP K CTLET Q QS --- DPVT A KNK R NSGRLSRKE K SVINA A KSE K DK S PSAI S QSTERKQLLNENPSKKD KK TEQ SG NKK E 1208
Cdd:PTZ00108 1147 VEE K EIAKE Q RL ksk TKGK A SKL R KPKLKKKEK K KKKSS A DKS K KA S VVGN S KRVDSDEKRKLDDKPDN KK SNS SG SDQ E 1226
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1209 AVVGPLD K TET SS S --- TNIIDKK S NE S F D SAMQP SD R L NQKESAFTKLSSI S SPKKIMKDQD K DL D alskg G D SN PTIR 1285
Cdd:PTZ00108 1227 DDEEQKT K PKK SS V krl KSKKNNS S KS S E D NDEFS SD D L SKEGKPKNAPKRV S AVQYSPPPPS K RP D ----- G E SN GGSK 1301
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1286 DTGEDSRQTD K KHQENDTKHEEEDS S KL K ANIDETKSSSE K D A epis KD S SQDSAKP R LS K P KS RNKRKKNEKKPN D SIA 1365
Cdd:PTZ00108 1302 PSSPTKKKVK K RLEGSLAALKKKKK S EK K TARKKKSKTRV K Q A ---- SA S QSSRLLR R PR K K KS DSSSEDDDDSEV D DSE 1377
....*....
gi 24653671 1366 ES D I E GGFQ 1374
Cdd:PTZ00108 1378 DE D D E DDED 1386
PTZ00449
PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
739-1091
2.00e-04
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain]
Cd Length: 943
Bit Score: 47.38
E-value: 2.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 739 VSVTSV Q GE Q N pviei V K E L EQETISEVV P AQNDQ S SVE D QT lad K E N P VEKPS P V KAP ----- SSSKD E PPA E ENL P AP 813
Cdd:PTZ00449 474 TRISKI Q FT Q E ----- I K K L IKKSKKKLA P IEEED S DKH D EP --- P E G P EASGL P P KAP gdkeg EEGEH E DSK E SDE P KE 545
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 814 DQD P I E QQKTP V A K NQQHD KEH NE apkaeslsv S D IP SS S VT P S -- K KRN H SSPANT PKK S K EIEAL Q SSVPRRALRSDK 891
Cdd:PTZ00449 546 GGK P G E TKEGE V G K KPGPA KEH KP --------- S K IP TL S KK P E fp K DPK H PKDPEE PKK P K RPRSA Q RPTRPKSPKLPE 616
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 892 AT -- P QNLRESR S KRTL K TELT llmdd TM R R SSP RLGRS P AESH S S he RS P MEK K VTVSKLA K DLITI D KEKE ielkslp 969
Cdd:PTZ00449 617 LL di P KSPKRPE S PKSP K RPPP ----- PQ R P SSP ERPEG P KIIK S P -- KP P KSP K PPFDPKF K EKFYD D YLDA ------- 682
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 970 d A SET K DV K I T KTTTA S DT SIL TDEN P SSSK T EMKKLKGK P L K AKKMSRTSETEVKKAI A DSNE DI psifsikcve E HL T 1049
Cdd:PTZ00449 683 - A AKS K ET K T T VVLDE S FE SIL KETL P ETPG T PFTTPRPL P P K LPRDEEFPFEPIGDPD A EQPD DI ---------- E FF T 751
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 24653671 1050 SS E S E QKDEK E E l LCPK P QI D CT n TDLEQSTA I ETD T EQVE E 1091
Cdd:PTZ00449 752 PP E E E RTFFH E T - PADT P LP D IL - AEEFKEED I HAE T GEPD E 791
PspC_subgroup_1
NF033838 pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
503-842
1.57e-03
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain]
Cd Length: 684
Bit Score: 44.23
E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 503 ME E KSANCRDG E G E P VK RKRGR PR K iip K E EA K T A ETENTIESLNTNVPLS I D T SK E NP E T E t VNLEVPI K QD E L V SDLD 582
Cdd:NF033838 178 IA E SDVEVKKA E L E L VK EEAKE PR D --- E E KI K Q A KAKVESKKAEATRLEK I K T DR E KA E E E - AKRRADA K LK E A V EKNV 253
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 583 NAK E ltgstnlp QD DIEMASNHQETDLKCA PD RVAL D KSE S TPK V E EE Q L ckvdt PS DTALD E S KV S E SA K NHI E LED K D 662
Cdd:NF033838 254 ATS E -------- QD KPKRRAKRGVLGEPAT PD KKEN D AKS S DSS V G EE T L ----- PS PSLKP E K KV A E AE K KVE E AKK K A 320
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 663 KD - KEE TQKES P NGNS K etnensviv T N E V E LP akkaeakaeagnive ESD SQLA E dfkl AE EI L AA E VG K GVE a NE VSV 741
Cdd:NF033838 321 KD q KEE DRRNY P TNTY K --------- T L E L E IA --------------- ESD VKVK E ---- AE LE L VK E EA K EPR - NE EKI 371
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 742 TSVQGEQNPVIEIVKE LE QETISEVVPAQNDQSSVEDQTLA d KE N P V E K P S P VK AP SSS K DE P PA E E nlpapdqd P I EQ Q 821
Cdd:NF033838 372 KQAKAKVESKKAEATR LE KIKTDRKKAEEEAKRKAAEEDKV - KE K P A E Q P Q P AP AP QPE K PA P KP E K -------- P A EQ P 442
330 340
....*....|....*....|.
gi 24653671 822 K TPVAKN QQ hd K E HNE A PKA E 842
Cdd:NF033838 443 K AEKPAD QQ -- A E EDY A RRS E 461
PRK05901
PRK05901 RNA polymerase sigma factor; Provisional
1624-1822
4.17e-03
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain]
Cd Length: 509
Bit Score: 42.67
E-value: 4.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1624 KR T PTSSLPTNSR K SIF KK TP AKSK RLTK I LESME K TPSREPSV slgev N P DSDPVAAESVAVLHESDR D LESNE IP NEE 1703
Cdd:PRK05901 4 AS T KAELAAEEEA K KKL KK LA AKSK SKGF I TKEEI K EALESKKK ----- T P EQIDQVLIFLSGMVKDTD D ATESD IP KKK 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1704 VFEDTEE A S A EDTDN K LK K K E D D HELEV n DICA A SKNPITDDST KD ASSNKST D S D VLQETK D E L SNSL I NATQGEDTPI 1783
Cdd:PRK05901 79 TKTAAKA A A A KAPAK K KL K D E L D SSKKA - EKKN A LDKDDDLNYV KD IDVLNQA D D D DDDDDD D D L DDDD I DDDDDDEDDD 157
170 180 190
....*....|....*....|....*....|....*....
gi 24653671 1784 KELTEEE V PNNKTVED E S K KQ E I L K D LEPDNAALEEDT A 1822
Cdd:PRK05901 158 EDDDDDD V DDEDEEKK E A K EL E K L S D DDDFVWDEDDSE A 196
PTZ00121
PTZ00121 MAEBL; Provisional
1671-2360
7.43e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.44
E-value: 7.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1671 E VNPDS D PVA AE S V AVLH E SDR D L E ---- SN E IP N E E VFEDT EEA SAEDTDNKLKKKEDDHELEVNDICA A SKNPIT D DS 1746
Cdd:PTZ00121 1216 E ARKAE D AKK AE A V KKAE E AKK D A E eakk AE E ER N N E EIRKF EEA RMAHFARRQAAIKAEEARKADELKK A EEKKKA D EA 1295
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1747 T K DASSN K STDSDVLQ E TK --- DE LSNSLIN A TQGE D TPI K ELT E EEVPNNKTVEDESKKQEILKDL E PDNA A L E EDTAS 1823
Cdd:PTZ00121 1296 K K AEEKK K ADEAKKKA E EA kka DE AKKKAEE A KKKA D AAK K KAE E AKKAAEAAKAEAEAAADEAEAA E EKAE A A E KKKEE 1375
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1824 TA K A A EEMDLYIK EK SNVKSVLAEP E T D VTDDE EL AQS pipns SETTSVT D DPEPSTSSVV K - RSLR K READSSQP DEA A 1902
Cdd:PTZ00121 1376 AK K K A DAAKKKAE EK KKADEAKKKA E E D KKKAD EL KKA ----- AAAKKKA D EAKKKAEEKK K a DEAK K KAEEAKKA DEA K 1450
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1903 K RKQRQDVEKSLTG K K E QV K P A RRRQLAEV E ERPSLKRS K TES EAK ST vqgkyisiignetim SSTTAPIR E TNRE A AST 1982
Cdd:PTZ00121 1451 K KAEEAKKAEEAKK K A E EA K K A DEAKKKAE E AKKADEAK K KAE EAK KK --------------- ADEAKKAA E AKKK A DEA 1515
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1983 SPSARKSAVQ EAK HV E T tkhiilgppg K K LLHSDSP A A E V KK pmvqtllss TLS L Q K PST L DDGSPL K IRKSL KK SIA D E 2062
Cdd:PTZ00121 1516 KKAEEAKKAD EAK KA E E ---------- A K KADEAKK A E E K KK --------- ADE L K K AEE L KKAEEK K KAEEA KK AEE D K 1576
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2063 N I dgdqsifssssvlnkntsvv A P RK VNI svs LLQSKDTQV E TAASSS E TPILT K K E KL K TQKST K - K P E GN KK T E SK KK 2141
Cdd:PTZ00121 1577 N M -------------------- A L RK AEE --- AKKAEEARI E EVMKLY E EEKKM K A E EA K KAEEA K i K A E EL KK A E EE KK 1633
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2142 SLV Q gpqm KTQ K SE E AVSGPKI L N K yl KS E TESSRKTVSTVTGRKQIGQL E VL KK P E S -- R K SE E S L V - EA ISR KK QSQV 2218
Cdd:PTZ00121 1634 KVE Q ---- LKK K EA E EKKKAEE L K K -- AE E ENKIKAAEEAKKAEEDKKKA E EA KK A E E de K K AA E A L K k EA EEA KK AEEL 1707
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2219 QRLSKIDGR K S E gtslp QPDVSKS E TAL KA - ALP KE T E FPVQD A ei E KMS K GRGHQNAVKNT K T E QP K SKP kt E V R SLQA 2297
Cdd:PTZ00121 1708 KKKEAEEKK K A E ----- ELKKAEE E NKI KA e EAK KE A E EDKKK A -- E EAK K DEEEKKKIAHL K K E EE K KAE -- E I R KEKE 1778
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2298 EAAT E LM D SM D SQSDVS --- D I RAT F PESQG I FNVPGHMTRA I SSNRSLAPTPTP ---- MSDS Q RNASKE 2360
Cdd:PTZ00121 1779 AVIE E EL D EE D EKRRME vdk K I KDI F DNFAN I IEGGKEGNLV I NDSKEMEDSAIK evad SKNM Q LEEADA 1848
Name
Accession
Description
Interval
E-value
PTZ00108
PTZ00108 DNA topoisomerase 2-like protein; Provisional
1132-1374
7.94e-05
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain]
Cd Length: 1388
Bit Score: 48.89
E-value: 7.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1132 MRP K CTLET Q QS --- DPVT A KNK R NSGRLSRKE K SVINA A KSE K DK S PSAI S QSTERKQLLNENPSKKD KK TEQ SG NKK E 1208
Cdd:PTZ00108 1147 VEE K EIAKE Q RL ksk TKGK A SKL R KPKLKKKEK K KKKSS A DKS K KA S VVGN S KRVDSDEKRKLDDKPDN KK SNS SG SDQ E 1226
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1209 AVVGPLD K TET SS S --- TNIIDKK S NE S F D SAMQP SD R L NQKESAFTKLSSI S SPKKIMKDQD K DL D alskg G D SN PTIR 1285
Cdd:PTZ00108 1227 DDEEQKT K PKK SS V krl KSKKNNS S KS S E D NDEFS SD D L SKEGKPKNAPKRV S AVQYSPPPPS K RP D ----- G E SN GGSK 1301
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1286 DTGEDSRQTD K KHQENDTKHEEEDS S KL K ANIDETKSSSE K D A epis KD S SQDSAKP R LS K P KS RNKRKKNEKKPN D SIA 1365
Cdd:PTZ00108 1302 PSSPTKKKVK K RLEGSLAALKKKKK S EK K TARKKKSKTRV K Q A ---- SA S QSSRLLR R PR K K KS DSSSEDDDDSEV D DSE 1377
....*....
gi 24653671 1366 ES D I E GGFQ 1374
Cdd:PTZ00108 1378 DE D D E DDED 1386
PTZ00449
PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
739-1091
2.00e-04
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain]
Cd Length: 943
Bit Score: 47.38
E-value: 2.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 739 VSVTSV Q GE Q N pviei V K E L EQETISEVV P AQNDQ S SVE D QT lad K E N P VEKPS P V KAP ----- SSSKD E PPA E ENL P AP 813
Cdd:PTZ00449 474 TRISKI Q FT Q E ----- I K K L IKKSKKKLA P IEEED S DKH D EP --- P E G P EASGL P P KAP gdkeg EEGEH E DSK E SDE P KE 545
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 814 DQD P I E QQKTP V A K NQQHD KEH NE apkaeslsv S D IP SS S VT P S -- K KRN H SSPANT PKK S K EIEAL Q SSVPRRALRSDK 891
Cdd:PTZ00449 546 GGK P G E TKEGE V G K KPGPA KEH KP --------- S K IP TL S KK P E fp K DPK H PKDPEE PKK P K RPRSA Q RPTRPKSPKLPE 616
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 892 AT -- P QNLRESR S KRTL K TELT llmdd TM R R SSP RLGRS P AESH S S he RS P MEK K VTVSKLA K DLITI D KEKE ielkslp 969
Cdd:PTZ00449 617 LL di P KSPKRPE S PKSP K RPPP ----- PQ R P SSP ERPEG P KIIK S P -- KP P KSP K PPFDPKF K EKFYD D YLDA ------- 682
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 970 d A SET K DV K I T KTTTA S DT SIL TDEN P SSSK T EMKKLKGK P L K AKKMSRTSETEVKKAI A DSNE DI psifsikcve E HL T 1049
Cdd:PTZ00449 683 - A AKS K ET K T T VVLDE S FE SIL KETL P ETPG T PFTTPRPL P P K LPRDEEFPFEPIGDPD A EQPD DI ---------- E FF T 751
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 24653671 1050 SS E S E QKDEK E E l LCPK P QI D CT n TDLEQSTA I ETD T EQVE E 1091
Cdd:PTZ00449 752 PP E E E RTFFH E T - PADT P LP D IL - AEEFKEED I HAE T GEPD E 791
PspC_subgroup_1
NF033838 pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
503-842
1.57e-03
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain]
Cd Length: 684
Bit Score: 44.23
E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 503 ME E KSANCRDG E G E P VK RKRGR PR K iip K E EA K T A ETENTIESLNTNVPLS I D T SK E NP E T E t VNLEVPI K QD E L V SDLD 582
Cdd:NF033838 178 IA E SDVEVKKA E L E L VK EEAKE PR D --- E E KI K Q A KAKVESKKAEATRLEK I K T DR E KA E E E - AKRRADA K LK E A V EKNV 253
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 583 NAK E ltgstnlp QD DIEMASNHQETDLKCA PD RVAL D KSE S TPK V E EE Q L ckvdt PS DTALD E S KV S E SA K NHI E LED K D 662
Cdd:NF033838 254 ATS E -------- QD KPKRRAKRGVLGEPAT PD KKEN D AKS S DSS V G EE T L ----- PS PSLKP E K KV A E AE K KVE E AKK K A 320
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 663 KD - KEE TQKES P NGNS K etnensviv T N E V E LP akkaeakaeagnive ESD SQLA E dfkl AE EI L AA E VG K GVE a NE VSV 741
Cdd:NF033838 321 KD q KEE DRRNY P TNTY K --------- T L E L E IA --------------- ESD VKVK E ---- AE LE L VK E EA K EPR - NE EKI 371
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 742 TSVQGEQNPVIEIVKE LE QETISEVVPAQNDQSSVEDQTLA d KE N P V E K P S P VK AP SSS K DE P PA E E nlpapdqd P I EQ Q 821
Cdd:NF033838 372 KQAKAKVESKKAEATR LE KIKTDRKKAEEEAKRKAAEEDKV - KE K P A E Q P Q P AP AP QPE K PA P KP E K -------- P A EQ P 442
330 340
....*....|....*....|.
gi 24653671 822 K TPVAKN QQ hd K E HNE A PKA E 842
Cdd:NF033838 443 K AEKPAD QQ -- A E EDY A RRS E 461
PTZ00121
PTZ00121 MAEBL; Provisional
660-1341
1.80e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 44.36
E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 660 D K D KDKEETQK E SPNGNSKETN E NSVIV T NEV E LPA K KA EAK AE A GNIVEESDSQL AED FKL AEE ILA AE VG K G VE ANEV 739
Cdd:PTZ00121 1080 D F D AKEDNRAD E ATEEAFGKAE E AKKTE T GKA E EAR K AE EAK KK A EDARKAEEARK AED ARK AEE ARK AE DA K R VE IARK 1159
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 740 SVTSVQG E QNPVI E IV K EL E QETIS E V V PAQNDQSSV ED QTL A DKENPV E KPSPVKAPSSSK D EPP AE ENLP A pdqdpi E 819
Cdd:PTZ00121 1160 AEDARKA E EARKA E DA K KA E AARKA E E V RKAEELRKA ED ARK A EAARKA E EERKAEEARKAE D AKK AE AVKK A ------ E 1233
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 820 QQ K TPVAKNQQHDK E H N EAPKAESLSVSDIPSSSVTPSK K RNHSSP A NTP KK SK E IEALQSSVPRRALRSDKATPQNLR E 899
Cdd:PTZ00121 1234 EA K KDAEEAKKAEE E R N NEEIRKFEEARMAHFARRQAAI K AEEARK A DEL KK AE E KKKADEAKKAEEKKKADEAKKKAE E 1313
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 900 SRSKRTL K TEL tllmd DTMRRSSPRLGRSPA E SHSSH E -- RSPM E KKVTVSKL A KDLITIDKE K EI E L K SLP DA SET K DV 977
Cdd:PTZ00121 1314 AKKADEA K KKA ----- EEAKKKADAAKKKAE E AKKAA E aa KAEA E AAADEAEA A EEKAEAAEK K KE E A K KKA DA AKK K AE 1388
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 978 KIT K TTT A SDTS iltd E NPSSSKT E M KK LKGKPL KA KKMSRTS E t E V KKA -- IADSN E DIPSIFSI K CVE E HLTSS E SEQ 1055
Cdd:PTZ00121 1389 EKK K ADE A KKKA ---- E EDKKKAD E L KK AAAAKK KA DEAKKKA E - E K KKA de AKKKA E EAKKADEA K KKA E EAKKA E EAK 1463
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1056 K DEK E ellcp KPQI D CTNTDL E QSTAIETDTEQV EE KRSNRRKSRRIRNE K F K TE tdtlsdhl D AKKAE N A SLEISMR p K 1135
Cdd:PTZ00121 1464 K KAE E ----- AKKA D EAKKKA E EAKKADEAKKKA EE AKKKADEAKKAAEA K K K AD -------- E AKKAE E A KKADEAK - K 1529
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1136 CTLETQQSDPVT A KN K RNSGR L SRK E K svin AA K S E KD K SPSAISQST E R K QL lnen PSK K DKKTEQSGNKKEAV V GP L D 1215
Cdd:PTZ00121 1530 AEEAKKADEAKK A EE K KKADE L KKA E E ---- LK K A E EK K KAEEAKKAE E D K NM ---- ALR K AEEAKKAEEARIEE V MK L Y 1601
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1216 KT E T ssstniid K KSN E SFDS A MQPSDRLNQKES A FTKLSSISSP KK IMKDQD K DLDA L S K GGDS N P t I RDTG E DSRQTD 1295
Cdd:PTZ00121 1602 EE E K -------- K MKA E EAKK A EEAKIKAEELKK A EEEKKKVEQL KK KEAEEK K KAEE L K K AEEE N K - I KAAE E AKKAEE 1672
650 660 670 680
....*....|....*....|....*....|....*....|....*.
gi 24653671 1296 K K HQENDT K HE EED SS K l K A NIDETKSSSE K D AE PIS K DSSQDSA K 1341
Cdd:PTZ00121 1673 D K KKAEEA K KA EED EK K - A A EALKKEAEEA K K AE ELK K KEAEEKK K 1717
PRK08581
PRK08581 amidase domain-containing protein;
1163-1404
3.37e-03
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain]
Cd Length: 619
Bit Score: 43.24
E-value: 3.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1163 SVIN A AKSE KD KSPSAI S QSTERK qll N ENPSK KD KKTEQSG nkkeavvgpl DKTETSS S TNIIDK K SNESF DS AMQP S D 1242
Cdd:PRK08581 23 PTAY A DDPQ KD STAKTT S HDSKKS --- N DDETS KD TSSKDTD ---------- KADNNNT S NQDNND K KFSTI DS STSD S N 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1243 rl N QKESAFTK L SSISSPKKIM K DQDK D LDA L SK ------ GGD S NPT --- IRDTG E D S RQTDK K HQENDT K HEEEDS S KL 1313
Cdd:PRK08581 90 -- N IIDFIYKN L PQTNINQLLT K NKYD D NYS L TT liqnlf NLN S DIS dye QPRNS E K S TNDSN K NSDSSI K NDTDTQ S SK 167
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1314 KANI D ET K SS S EKDAE P ISKDSSQD S A KP r LSKPK S RNKRKKNEKKPND S i AES D IEGGFQVNTETVQATC S TPSESNK K 1393
Cdd:PRK08581 168 QDKA D NQ K AP S SNNTK P STSNKQPN S P KP - TQPNQ S NSQPASDDTANQK S - SSK D NQSMSDSALDSILDQY S EDAKKTQ K 245
250
....*....|.
gi 24653671 1394 D MVKSDETNEE 1404
Cdd:PRK08581 246 D YASQSKKDKT 256
PRK05901
PRK05901 RNA polymerase sigma factor; Provisional
1624-1822
4.17e-03
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain]
Cd Length: 509
Bit Score: 42.67
E-value: 4.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1624 KR T PTSSLPTNSR K SIF KK TP AKSK RLTK I LESME K TPSREPSV slgev N P DSDPVAAESVAVLHESDR D LESNE IP NEE 1703
Cdd:PRK05901 4 AS T KAELAAEEEA K KKL KK LA AKSK SKGF I TKEEI K EALESKKK ----- T P EQIDQVLIFLSGMVKDTD D ATESD IP KKK 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1704 VFEDTEE A S A EDTDN K LK K K E D D HELEV n DICA A SKNPITDDST KD ASSNKST D S D VLQETK D E L SNSL I NATQGEDTPI 1783
Cdd:PRK05901 79 TKTAAKA A A A KAPAK K KL K D E L D SSKKA - EKKN A LDKDDDLNYV KD IDVLNQA D D D DDDDDD D D L DDDD I DDDDDDEDDD 157
170 180 190
....*....|....*....|....*....|....*....
gi 24653671 1784 KELTEEE V PNNKTVED E S K KQ E I L K D LEPDNAALEEDT A 1822
Cdd:PRK05901 158 EDDDDDD V DDEDEEKK E A K EL E K L S D DDDFVWDEDDSE A 196
PTZ00121
PTZ00121 MAEBL; Provisional
1671-2360
7.43e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.44
E-value: 7.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1671 E VNPDS D PVA AE S V AVLH E SDR D L E ---- SN E IP N E E VFEDT EEA SAEDTDNKLKKKEDDHELEVNDICA A SKNPIT D DS 1746
Cdd:PTZ00121 1216 E ARKAE D AKK AE A V KKAE E AKK D A E eakk AE E ER N N E EIRKF EEA RMAHFARRQAAIKAEEARKADELKK A EEKKKA D EA 1295
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1747 T K DASSN K STDSDVLQ E TK --- DE LSNSLIN A TQGE D TPI K ELT E EEVPNNKTVEDESKKQEILKDL E PDNA A L E EDTAS 1823
Cdd:PTZ00121 1296 K K AEEKK K ADEAKKKA E EA kka DE AKKKAEE A KKKA D AAK K KAE E AKKAAEAAKAEAEAAADEAEAA E EKAE A A E KKKEE 1375
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1824 TA K A A EEMDLYIK EK SNVKSVLAEP E T D VTDDE EL AQS pipns SETTSVT D DPEPSTSSVV K - RSLR K READSSQP DEA A 1902
Cdd:PTZ00121 1376 AK K K A DAAKKKAE EK KKADEAKKKA E E D KKKAD EL KKA ----- AAAKKKA D EAKKKAEEKK K a DEAK K KAEEAKKA DEA K 1450
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1903 K RKQRQDVEKSLTG K K E QV K P A RRRQLAEV E ERPSLKRS K TES EAK ST vqgkyisiignetim SSTTAPIR E TNRE A AST 1982
Cdd:PTZ00121 1451 K KAEEAKKAEEAKK K A E EA K K A DEAKKKAE E AKKADEAK K KAE EAK KK --------------- ADEAKKAA E AKKK A DEA 1515
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1983 SPSARKSAVQ EAK HV E T tkhiilgppg K K LLHSDSP A A E V KK pmvqtllss TLS L Q K PST L DDGSPL K IRKSL KK SIA D E 2062
Cdd:PTZ00121 1516 KKAEEAKKAD EAK KA E E ---------- A K KADEAKK A E E K KK --------- ADE L K K AEE L KKAEEK K KAEEA KK AEE D K 1576
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2063 N I dgdqsifssssvlnkntsvv A P RK VNI svs LLQSKDTQV E TAASSS E TPILT K K E KL K TQKST K - K P E GN KK T E SK KK 2141
Cdd:PTZ00121 1577 N M -------------------- A L RK AEE --- AKKAEEARI E EVMKLY E EEKKM K A E EA K KAEEA K i K A E EL KK A E EE KK 1633
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2142 SLV Q gpqm KTQ K SE E AVSGPKI L N K yl KS E TESSRKTVSTVTGRKQIGQL E VL KK P E S -- R K SE E S L V - EA ISR KK QSQV 2218
Cdd:PTZ00121 1634 KVE Q ---- LKK K EA E EKKKAEE L K K -- AE E ENKIKAAEEAKKAEEDKKKA E EA KK A E E de K K AA E A L K k EA EEA KK AEEL 1707
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2219 QRLSKIDGR K S E gtslp QPDVSKS E TAL KA - ALP KE T E FPVQD A ei E KMS K GRGHQNAVKNT K T E QP K SKP kt E V R SLQA 2297
Cdd:PTZ00121 1708 KKKEAEEKK K A E ----- ELKKAEE E NKI KA e EAK KE A E EDKKK A -- E EAK K DEEEKKKIAHL K K E EE K KAE -- E I R KEKE 1778
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 2298 EAAT E LM D SM D SQSDVS --- D I RAT F PESQG I FNVPGHMTRA I SSNRSLAPTPTP ---- MSDS Q RNASKE 2360
Cdd:PTZ00121 1779 AVIE E EL D EE D EKRRME vdk K I KDI F DNFAN I IEGGKEGNLV I NDSKEMEDSAIK evad SKNM Q LEEADA 1848
PRK14949
PRK14949 DNA polymerase III subunits gamma and tau; Provisional
1659-2042
8.77e-03
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain]
Cd Length: 944
Bit Score: 42.02
E-value: 8.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1659 KTPSREPSVSLGEVNPDSDPVA AE SVAV L H E SD rdl ESNEIPNEEVF E DTE EA S A EDTDNKLKKKED D H E L E VNDICA A S 1738
Cdd:PRK14949 383 SALAAAVQAPHANEPQFVNAAP AE KKTA L T E QT --- TAQQQVQAANA E AVA EA D A SAEPADTVEQAL D D E S E LLAALN A E 459
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1739 KNP I T -------- DD S TKDASS N k S TDSDVLQE T KDE - LS N SLINA TQ GE DT PIK -- ELTEEE V PN N KTV ED E skkqei L 1807
Cdd:PRK14949 460 QAV I L sqaqsqgf EA S SSLDAD N - S AVPEQIDS T AEQ s VV N PSVTD TQ VD DT SAS nn SAADNT V DD N YSA ED T ------ L 532
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1808 KDLEP D NAALEE D T A STAKAA eem D L Y IKEK S NVKSV L AEP E TDVTDDEELAQSPIPNS S ETTSVTDDPEPSTSSVVKRS 1887
Cdd:PRK14949 533 ESNGL D EGDYAQ D S A PLDAYQ --- D D Y VAFS S ESYNA L SDD E QHSANVQSAQSAAEAQP S SQSLSPISAVTTAAASLADD 609
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1888 ------ L RK R ea DS SQP D EA A KRKQRQ D VE KS LTGK K EQVK P A R RRQLAEVEE rpslk R S KTESEAK S tvqgkyisiign 1961
Cdd:PRK14949 610 dildav L AA R -- DS LLS D LD A LSPKEG D GK KS SADR K PKTP P S R APPASLSKP ----- A S SPDASQT S ------------ 670
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24653671 1962 etim S S TTAPIRETNREAA S TSPS A RK S AVQE A KHVETT kh IILG PP GKKLLHSD S PAAEVKKPMVQT L LS S TLSLQKPS 2041
Cdd:PRK14949 671 ---- A S FDLDPDFELATHQ S VPEA A LA S GSAP A PPPVPD -- PYDR PP WEEAPEVA S ANDGPNNAAEGN L SE S VEDASNSE 744
.
gi 24653671 2042 T 2042
Cdd:PRK14949 745 L 745
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
