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Conserved domains on  [gi|193208545|ref|NP_506389|]
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Thyroglobulin type-1 domain-containing protein [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
291-348 1.32e-10

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


:

Pssm-ID: 460351  Cd Length: 55  Bit Score: 57.40  E-value: 1.32e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 193208545   291 CGANEQYSACFSSCQPSCQDPSTPACPAPGCQPGCICLPGYIRrdsSPRSACVPRGLC 348
Cdd:pfam01826    1 CPANEVYSECGSACPPTCANLSPPDVCPEPCVEGCVCPPGFVR---NSGGKCVPPSDC 55
TY cd00191
Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 ...
128-190 1.25e-09

Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases


:

Pssm-ID: 238114  Cd Length: 66  Bit Score: 55.16  E-value: 1.25e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193208545  128 CAMRRRELLDELRSLEIVGQAIPLCEESGLaWRRRQCLAGTEVCWCVTRYGRRLSGKESKDEK 190
Cdd:cd00191     2 CERERASALESLAGPKLSGLYVPQCDEDGN-YEPVQCHGSTGYCWCVDPDGEEIPGTRTRGGP 63
Sod_Cu pfam00080
Copper/zinc superoxide dismutase (SODC); superoxide dismutases (SODs) catalyze the conversion ...
897-1003 5.06e-08

Copper/zinc superoxide dismutase (SODC); superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SOD1 gene cause familial amyotrophic lateral sclerosis (Lou Gehrig's disease). Structure is an eight-stranded beta sandwich, similar to the immunoglobulin fold.


:

Pssm-ID: 459663  Cd Length: 129  Bit Score: 52.56  E-value: 5.06e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193208545   897 GRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGA---PFSK------SLSPSLGDI-------TETGK 960
Cdd:pfam00080    3 GTVTFTQAGGGPVRVTGNLTGLTPGKHGFHIHEFGDCTNGCTSAGGhfnPTGKqhggpnDDGRHVGDLgnitadaDGVAT 82
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 193208545   961 F----DRIVEWPVIDVVGRAVVIysfstaewslraH-----FGEKP-------LACGTI 1003
Cdd:pfam00080   83 VeftdSLISLSGGNSIIGRALVV------------HagpddLGTQPtgnagarIACGVI 129
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
363-416 2.51e-06

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


:

Pssm-ID: 410995  Cd Length: 55  Bit Score: 45.39  E-value: 2.51e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 193208545  363 QYQTCGSACPISCATRNQPR-CNERCVTGCFCKIPFILENADdplhsRCILPSSC 416
Cdd:cd19941     6 VYSECGSACPPTCANPNAPPpCTKQCVEGCFCPEGYVRNSGG-----KCVPPSQC 55
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
782-837 2.75e-06

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


:

Pssm-ID: 410995  Cd Length: 55  Bit Score: 45.39  E-value: 2.75e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 193208545  782 CPdKHAVWSSCGTLCPEYCGQPSVP-VCSGTCSAGCHCAPGFVRARNDVtapCVPRE 837
Cdd:cd19941     1 CP-PNEVYSECGSACPPTCANPNAPpPCTKQCVEGCFCPEGYVRNSGGK---CVPPS 53
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
490-545 2.00e-05

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


:

Pssm-ID: 410995  Cd Length: 55  Bit Score: 43.07  E-value: 2.00e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 193208545  490 YQSCGSKCPASCDRPlsqAASIDCALSCEPGCFCRLPYVLadskDPNSTCILPQLC 545
Cdd:cd19941     7 YSECGSACPPTCANP---NAPPPCTKQCVEGCFCPEGYVR----NSGGKCVPPSQC 55
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
629-670 1.11e-03

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


:

Pssm-ID: 460351  Cd Length: 55  Bit Score: 38.14  E-value: 1.11e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 193208545   629 PTKEFMTCGSSCPMGCDN-RHPKNC-APCQTGCFCKNGLVFENS 670
Cdd:pfam01826    3 ANEVYSECGSACPPTCANlSPPDVCpEPCVEGCVCPPGFVRNSG 46
 
Name Accession Description Interval E-value
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
291-348 1.32e-10

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


Pssm-ID: 460351  Cd Length: 55  Bit Score: 57.40  E-value: 1.32e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 193208545   291 CGANEQYSACFSSCQPSCQDPSTPACPAPGCQPGCICLPGYIRrdsSPRSACVPRGLC 348
Cdd:pfam01826    1 CPANEVYSECGSACPPTCANLSPPDVCPEPCVEGCVCPPGFVR---NSGGKCVPPSDC 55
TY cd00191
Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 ...
128-190 1.25e-09

Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases


Pssm-ID: 238114  Cd Length: 66  Bit Score: 55.16  E-value: 1.25e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193208545  128 CAMRRRELLDELRSLEIVGQAIPLCEESGLaWRRRQCLAGTEVCWCVTRYGRRLSGKESKDEK 190
Cdd:cd00191     2 CERERASALESLAGPKLSGLYVPQCDEDGN-YEPVQCHGSTGYCWCVDPDGEEIPGTRTRGGP 63
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
291-348 1.11e-08

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


Pssm-ID: 410995  Cd Length: 55  Bit Score: 51.93  E-value: 1.11e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 193208545  291 CGANEQYSACFSSCQPSCQDPSTP-ACPAPgCQPGCICLPGYIRrdsSPRSACVPRGLC 348
Cdd:cd19941     1 CPPNEVYSECGSACPPTCANPNAPpPCTKQ-CVEGCFCPEGYVR---NSGGKCVPPSQC 55
Sod_Cu pfam00080
Copper/zinc superoxide dismutase (SODC); superoxide dismutases (SODs) catalyze the conversion ...
897-1003 5.06e-08

Copper/zinc superoxide dismutase (SODC); superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SOD1 gene cause familial amyotrophic lateral sclerosis (Lou Gehrig's disease). Structure is an eight-stranded beta sandwich, similar to the immunoglobulin fold.


Pssm-ID: 459663  Cd Length: 129  Bit Score: 52.56  E-value: 5.06e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193208545   897 GRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGA---PFSK------SLSPSLGDI-------TETGK 960
Cdd:pfam00080    3 GTVTFTQAGGGPVRVTGNLTGLTPGKHGFHIHEFGDCTNGCTSAGGhfnPTGKqhggpnDDGRHVGDLgnitadaDGVAT 82
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 193208545   961 F----DRIVEWPVIDVVGRAVVIysfstaewslraH-----FGEKP-------LACGTI 1003
Cdd:pfam00080   83 VeftdSLISLSGGNSIIGRALVV------------HagpddLGTQPtgnagarIACGVI 129
Thyroglobulin_1 pfam00086
Thyroglobulin type-1 repeat; Thyroglobulin type 1 repeats are thought to be involved in the ...
130-188 3.12e-07

Thyroglobulin type-1 repeat; Thyroglobulin type 1 repeats are thought to be involved in the control of proteolytic degradation. The domain usually contains six conserved cysteines. These form three disulphide bridges. Cysteines 1 pairs with 2, 3 with 4 and 5 with 6.


Pssm-ID: 459665  Cd Length: 66  Bit Score: 48.45  E-value: 3.12e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 193208545   130 MRRRELLDELRSLEIVGQAIPLCEESGLaWRRRQCLAGTEVCWCVTRYGRRLSGKESKD 188
Cdd:pfam00086    4 ERARALEQAASGRPASGLYIPNCDEDGF-YKPVQCHGSTGYCWCVDPEGQEIPGTRTRG 61
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
363-416 2.51e-06

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


Pssm-ID: 410995  Cd Length: 55  Bit Score: 45.39  E-value: 2.51e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 193208545  363 QYQTCGSACPISCATRNQPR-CNERCVTGCFCKIPFILENADdplhsRCILPSSC 416
Cdd:cd19941     6 VYSECGSACPPTCANPNAPPpCTKQCVEGCFCPEGYVRNSGG-----KCVPPSQC 55
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
782-837 2.75e-06

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


Pssm-ID: 410995  Cd Length: 55  Bit Score: 45.39  E-value: 2.75e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 193208545  782 CPdKHAVWSSCGTLCPEYCGQPSVP-VCSGTCSAGCHCAPGFVRARNDVtapCVPRE 837
Cdd:cd19941     1 CP-PNEVYSECGSACPPTCANPNAPpPCTKQCVEGCFCPEGYVRNSGGK---CVPPS 53
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
490-545 2.00e-05

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


Pssm-ID: 410995  Cd Length: 55  Bit Score: 43.07  E-value: 2.00e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 193208545  490 YQSCGSKCPASCDRPlsqAASIDCALSCEPGCFCRLPYVLadskDPNSTCILPQLC 545
Cdd:cd19941     7 YSECGSACPPTCANP---NAPPPCTKQCVEGCFCPEGYVR----NSGGKCVPPSQC 55
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
782-837 2.90e-05

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


Pssm-ID: 460351  Cd Length: 55  Bit Score: 42.37  E-value: 2.90e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 193208545   782 CPdKHAVWSSCGTLCPEYCGQPSVP-VCSGTCSAGCHCAPGFVRARNDVtapCVPRE 837
Cdd:pfam01826    1 CP-ANEVYSECGSACPPTCANLSPPdVCPEPCVEGCVCPPGFVRNSGGK---CVPPS 53
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
363-416 7.16e-05

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


Pssm-ID: 460351  Cd Length: 55  Bit Score: 41.22  E-value: 7.16e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 193208545   363 QYQTCGSACPISCATRNQP-RCNERCVTGCFCKIPFILENaddplHSRCILPSSC 416
Cdd:pfam01826    6 VYSECGSACPPTCANLSPPdVCPEPCVEGCVCPPGFVRNS-----GGKCVPPSDC 55
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
490-545 5.27e-04

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


Pssm-ID: 460351  Cd Length: 55  Bit Score: 38.91  E-value: 5.27e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 193208545   490 YQSCGSKCPASCDRPlsqAASIDCALSCEPGCFCRLPYVLadskDPNSTCILPQLC 545
Cdd:pfam01826    7 YSECGSACPPTCANL---SPPDVCPEPCVEGCVCPPGFVR----NSGGKCVPPSDC 55
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
629-670 1.11e-03

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


Pssm-ID: 460351  Cd Length: 55  Bit Score: 38.14  E-value: 1.11e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 193208545   629 PTKEFMTCGSSCPMGCDN-RHPKNC-APCQTGCFCKNGLVFENS 670
Cdd:pfam01826    3 ANEVYSECGSACPPTCANlSPPDVCpEPCVEGCVCPPGFVRNSG 46
PLN02957 PLN02957
copper, zinc superoxide dismutase
901-980 1.13e-03

copper, zinc superoxide dismutase


Pssm-ID: 215516 [Multi-domain]  Cd Length: 238  Bit Score: 41.66  E-value: 1.13e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193208545  901 FSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAPFSKSLSPS----LGDI-----TETGKFD---RIVEWP 968
Cdd:PLN02957   98 FAQVSMELARIEAAFSGLSPGTHGWSINEYGDLTRGAASTGKVYNPSDDDTdeepLGDLgtleaDENGEATfsgTKEKLK 177
                          90
                  ....*....|..
gi 193208545  969 VIDVVGRAVVIY 980
Cdd:PLN02957  178 VWDLIGRSLAVY 189
TY smart00211
Thyroglobulin type I repeats; The N-terminal region of human thyroglobulin contains 11 type-1 ...
149-183 1.82e-03

Thyroglobulin type I repeats; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases and binding partners of heparin.


Pssm-ID: 214561  Cd Length: 46  Bit Score: 36.97  E-value: 1.82e-03
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 193208545    149 IPLCEESGLaWRRRQCLAGTEVCWCVTRYGRRLSG 183
Cdd:smart00211    1 IPQCDEDGN-YEPVQCDGSSGQCWCVDATGREIPG 34
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
632-670 8.83e-03

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


Pssm-ID: 410995  Cd Length: 55  Bit Score: 35.37  E-value: 8.83e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 193208545  632 EFMTCGSSCPMGCDNRH-PKNC-APCQTGCFCKNGLVFENS 670
Cdd:cd19941     6 VYSECGSACPPTCANPNaPPPCtKQCVEGCFCPEGYVRNSG 46
 
Name Accession Description Interval E-value
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
291-348 1.32e-10

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


Pssm-ID: 460351  Cd Length: 55  Bit Score: 57.40  E-value: 1.32e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 193208545   291 CGANEQYSACFSSCQPSCQDPSTPACPAPGCQPGCICLPGYIRrdsSPRSACVPRGLC 348
Cdd:pfam01826    1 CPANEVYSECGSACPPTCANLSPPDVCPEPCVEGCVCPPGFVR---NSGGKCVPPSDC 55
TY cd00191
Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 ...
128-190 1.25e-09

Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases


Pssm-ID: 238114  Cd Length: 66  Bit Score: 55.16  E-value: 1.25e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193208545  128 CAMRRRELLDELRSLEIVGQAIPLCEESGLaWRRRQCLAGTEVCWCVTRYGRRLSGKESKDEK 190
Cdd:cd00191     2 CERERASALESLAGPKLSGLYVPQCDEDGN-YEPVQCHGSTGYCWCVDPDGEEIPGTRTRGGP 63
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
291-348 1.11e-08

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


Pssm-ID: 410995  Cd Length: 55  Bit Score: 51.93  E-value: 1.11e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 193208545  291 CGANEQYSACFSSCQPSCQDPSTP-ACPAPgCQPGCICLPGYIRrdsSPRSACVPRGLC 348
Cdd:cd19941     1 CPPNEVYSECGSACPPTCANPNAPpPCTKQ-CVEGCFCPEGYVR---NSGGKCVPPSQC 55
Sod_Cu pfam00080
Copper/zinc superoxide dismutase (SODC); superoxide dismutases (SODs) catalyze the conversion ...
897-1003 5.06e-08

Copper/zinc superoxide dismutase (SODC); superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SOD1 gene cause familial amyotrophic lateral sclerosis (Lou Gehrig's disease). Structure is an eight-stranded beta sandwich, similar to the immunoglobulin fold.


Pssm-ID: 459663  Cd Length: 129  Bit Score: 52.56  E-value: 5.06e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193208545   897 GRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGA---PFSK------SLSPSLGDI-------TETGK 960
Cdd:pfam00080    3 GTVTFTQAGGGPVRVTGNLTGLTPGKHGFHIHEFGDCTNGCTSAGGhfnPTGKqhggpnDDGRHVGDLgnitadaDGVAT 82
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 193208545   961 F----DRIVEWPVIDVVGRAVVIysfstaewslraH-----FGEKP-------LACGTI 1003
Cdd:pfam00080   83 VeftdSLISLSGGNSIIGRALVV------------HagpddLGTQPtgnagarIACGVI 129
Thyroglobulin_1 pfam00086
Thyroglobulin type-1 repeat; Thyroglobulin type 1 repeats are thought to be involved in the ...
130-188 3.12e-07

Thyroglobulin type-1 repeat; Thyroglobulin type 1 repeats are thought to be involved in the control of proteolytic degradation. The domain usually contains six conserved cysteines. These form three disulphide bridges. Cysteines 1 pairs with 2, 3 with 4 and 5 with 6.


Pssm-ID: 459665  Cd Length: 66  Bit Score: 48.45  E-value: 3.12e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 193208545   130 MRRRELLDELRSLEIVGQAIPLCEESGLaWRRRQCLAGTEVCWCVTRYGRRLSGKESKD 188
Cdd:pfam00086    4 ERARALEQAASGRPASGLYIPNCDEDGF-YKPVQCHGSTGYCWCVDPEGQEIPGTRTRG 61
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
363-416 2.51e-06

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


Pssm-ID: 410995  Cd Length: 55  Bit Score: 45.39  E-value: 2.51e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 193208545  363 QYQTCGSACPISCATRNQPR-CNERCVTGCFCKIPFILENADdplhsRCILPSSC 416
Cdd:cd19941     6 VYSECGSACPPTCANPNAPPpCTKQCVEGCFCPEGYVRNSGG-----KCVPPSQC 55
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
782-837 2.75e-06

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


Pssm-ID: 410995  Cd Length: 55  Bit Score: 45.39  E-value: 2.75e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 193208545  782 CPdKHAVWSSCGTLCPEYCGQPSVP-VCSGTCSAGCHCAPGFVRARNDVtapCVPRE 837
Cdd:cd19941     1 CP-PNEVYSECGSACPPTCANPNAPpPCTKQCVEGCFCPEGYVRNSGGK---CVPPS 53
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
490-545 2.00e-05

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


Pssm-ID: 410995  Cd Length: 55  Bit Score: 43.07  E-value: 2.00e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 193208545  490 YQSCGSKCPASCDRPlsqAASIDCALSCEPGCFCRLPYVLadskDPNSTCILPQLC 545
Cdd:cd19941     7 YSECGSACPPTCANP---NAPPPCTKQCVEGCFCPEGYVR----NSGGKCVPPSQC 55
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
782-837 2.90e-05

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


Pssm-ID: 460351  Cd Length: 55  Bit Score: 42.37  E-value: 2.90e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 193208545   782 CPdKHAVWSSCGTLCPEYCGQPSVP-VCSGTCSAGCHCAPGFVRARNDVtapCVPRE 837
Cdd:pfam01826    1 CP-ANEVYSECGSACPPTCANLSPPdVCPEPCVEGCVCPPGFVRNSGGK---CVPPS 53
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
363-416 7.16e-05

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


Pssm-ID: 460351  Cd Length: 55  Bit Score: 41.22  E-value: 7.16e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 193208545   363 QYQTCGSACPISCATRNQP-RCNERCVTGCFCKIPFILENaddplHSRCILPSSC 416
Cdd:pfam01826    6 VYSECGSACPPTCANLSPPdVCPEPCVEGCVCPPGFVRNS-----GGKCVPPSDC 55
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
490-545 5.27e-04

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


Pssm-ID: 460351  Cd Length: 55  Bit Score: 38.91  E-value: 5.27e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 193208545   490 YQSCGSKCPASCDRPlsqAASIDCALSCEPGCFCRLPYVLadskDPNSTCILPQLC 545
Cdd:pfam01826    7 YSECGSACPPTCANL---SPPDVCPEPCVEGCVCPPGFVR----NSGGKCVPPSDC 55
TIL pfam01826
Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well ...
629-670 1.11e-03

Trypsin Inhibitor like cysteine rich domain; This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.


Pssm-ID: 460351  Cd Length: 55  Bit Score: 38.14  E-value: 1.11e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 193208545   629 PTKEFMTCGSSCPMGCDN-RHPKNC-APCQTGCFCKNGLVFENS 670
Cdd:pfam01826    3 ANEVYSECGSACPPTCANlSPPDVCpEPCVEGCVCPPGFVRNSG 46
PLN02957 PLN02957
copper, zinc superoxide dismutase
901-980 1.13e-03

copper, zinc superoxide dismutase


Pssm-ID: 215516 [Multi-domain]  Cd Length: 238  Bit Score: 41.66  E-value: 1.13e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193208545  901 FSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAPFSKSLSPS----LGDI-----TETGKFD---RIVEWP 968
Cdd:PLN02957   98 FAQVSMELARIEAAFSGLSPGTHGWSINEYGDLTRGAASTGKVYNPSDDDTdeepLGDLgtleaDENGEATfsgTKEKLK 177
                          90
                  ....*....|..
gi 193208545  969 VIDVVGRAVVIY 980
Cdd:PLN02957  178 VWDLIGRSLAVY 189
TY smart00211
Thyroglobulin type I repeats; The N-terminal region of human thyroglobulin contains 11 type-1 ...
149-183 1.82e-03

Thyroglobulin type I repeats; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases and binding partners of heparin.


Pssm-ID: 214561  Cd Length: 46  Bit Score: 36.97  E-value: 1.82e-03
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 193208545    149 IPLCEESGLaWRRRQCLAGTEVCWCVTRYGRRLSG 183
Cdd:smart00211    1 IPQCDEDGN-YEPVQCDGSSGQCWCVDATGREIPG 34
TIL cd19941
trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich ...
632-670 8.83e-03

trypsin inhibitor-like cysteine rich domain; TIL (trypsin inhibitor-like) cysteine rich domains are found in smapins (small serine proteinase inhibitor), or Ascaris trypsin inhibitor (ATI)-like proteins, whose members include anticoagulant proteins, elastase inhibitors, trypsin inhibitors, thrombin inhibitors, and chymotrypsin inhibitors. The TIL domain is also found in some large modular glycoproteins, including the von Willebrand factor (VWF), mucin-6, mucin-19, and SCO-spondin, among others. The TIL domain is characterized by the presence of five disulfide bonds (two of which are located on either side of the reactive site) in a single small protein domain of 61-62 residues. The cysteine residues that form the disulfide bonds are linked in the pattern: cysteines 1-7, 2-6, 3-5, 4-10 and 8-9. TILs can occur as a single domain or in multiple tandem arrangements. The disulfide bonds account for the unusual resistance to proteolysis and heat denaturation of these proteins. Smapins possess an unusual fold and, with the exception of the reactive site, shows no similarity to other serine protease inhibitors. The serine protease inhibitors comprise a large family of molecules involved in inflammatory responses, blood clotting, and complement activation.


Pssm-ID: 410995  Cd Length: 55  Bit Score: 35.37  E-value: 8.83e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 193208545  632 EFMTCGSSCPMGCDNRH-PKNC-APCQTGCFCKNGLVFENS 670
Cdd:cd19941     6 VYSECGSACPPTCANPNaPPPCtKQCVEGCFCPEGYVRNSG 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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