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Conserved domains on  [gi|32566695|ref|NP_505905|]
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Amino acid transporter protein 6 [Caenorhabditis elegans]

Protein Classification

amino acid permease( domain architecture ID 1000062)

amino acid permease facilitates the transport of amino acids, similar to solute carrier family 7 (SLC7) members

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
2A0308 super family cl30119
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 18-482 2.74e-95

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00911:

Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 298.58  E-value: 2.74e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    18 QKMGLLGAISYIVGNIVGSGIFITPTSIIENVNSVGLSLAIWILAAFISMLGSFCYVELGTSIRLSGGDFAYLCFMKWYP 97
Cdd:TIGR00911  42 KEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPL 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    98 VAFAFMCIGCTINYPATLAVQAQTFAEYVFRGAGVELDETSefWAKKLLGFSLIILLMFMNFFSLK--TFVQrfsILASL 175
Cdd:TIGR00911 122 LAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEVPE--WAIRLVAVLCVLLLTLVNCLSVKwaTRVQ---DIFTA 196

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   176 AKIAATLLIIITGFYYLIFKHWKQ-NLEEPFKGSNWNPGPFVNALFAGLFSYDGWDILNFGAEEIENPKRTMPLSIIIGM 254
Cdd:TIGR00911 197 CKLLALLLIIITGWVQLGKGGVESlNPKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISM 276

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   255 TCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLGAAAFVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGHIPSA 334
Cdd:TIGR00911 277 PIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSL 356

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   335 ISGIAPNCDSPRVALLVHILIAIAVSFLGDPDKLINYVAFAQWSQRAFTMSALLYLRiRGRPRHPDRIQLPIIMPILFFL 414
Cdd:TIGR00911 357 LSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLR-YKRPEMNRPIKVPLFFPVFFLL 435

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 32566695   415 VCTSMVVISIIDDFKSSAVGLGILLGGLIIFIIFVWDRALPSShtFRNATHvineESTKFMQIIFNVV 482
Cdd:TIGR00911 436 SCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKW--FRYLIV----SKTVLLQKVLEVV 497
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 18-482 2.74e-95

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 298.58  E-value: 2.74e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    18 QKMGLLGAISYIVGNIVGSGIFITPTSIIENVNSVGLSLAIWILAAFISMLGSFCYVELGTSIRLSGGDFAYLCFMKWYP 97
Cdd:TIGR00911  42 KEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPL 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    98 VAFAFMCIGCTINYPATLAVQAQTFAEYVFRGAGVELDETSefWAKKLLGFSLIILLMFMNFFSLK--TFVQrfsILASL 175
Cdd:TIGR00911 122 LAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEVPE--WAIRLVAVLCVLLLTLVNCLSVKwaTRVQ---DIFTA 196

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   176 AKIAATLLIIITGFYYLIFKHWKQ-NLEEPFKGSNWNPGPFVNALFAGLFSYDGWDILNFGAEEIENPKRTMPLSIIIGM 254
Cdd:TIGR00911 197 CKLLALLLIIITGWVQLGKGGVESlNPKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISM 276

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   255 TCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLGAAAFVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGHIPSA 334
Cdd:TIGR00911 277 PIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSL 356

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   335 ISGIAPNCDSPRVALLVHILIAIAVSFLGDPDKLINYVAFAQWSQRAFTMSALLYLRiRGRPRHPDRIQLPIIMPILFFL 414
Cdd:TIGR00911 357 LSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLR-YKRPEMNRPIKVPLFFPVFFLL 435

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 32566695   415 VCTSMVVISIIDDFKSSAVGLGILLGGLIIFIIFVWDRALPSShtFRNATHvineESTKFMQIIFNVV 482
Cdd:TIGR00911 436 SCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKW--FRYLIV----SKTVLLQKVLEVV 497
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
9-423 6.49e-51

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 180.09  E-value: 6.49e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   9 ASMPDDSRSQKMGLLGAISYIVGNIVGSGIFITPTSIIENVNsvGLSLAIWILAAFISMLGSFCYVELGTSIRLSGGDFA 88
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAG--PAAILAWLIAGLLALLVALSYAELASAFPRAGGAYT 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  89 YLC-----FMKWYpVAFAFMcigctINYPATLAVQAQTFAEYvfrgagveLDETSEFWAKKLLGFSLIILLMFMNFFSLK 163
Cdd:COG0531  80 YARralgpLLGFL-AGWALL-----LSYVLAVAAVAVAFGGY--------LSSLFPAGGSVLIALVLILLLTLLNLRGVK 145

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695 164 TFVqRFSILASLAKIAATLLIIITGFYYLIFKHWkqnleEPFKGSNWNPGPFVNALFAGLFSYDGWDILNFGAEEIENPK 243
Cdd:COG0531 146 ESA-KVNNILTVLKLLVLLLFIVVGLFAFDPANF-----TPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPK 219

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695 244 RTMPLSIIIGMTCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLG-AAAFVVPVMVAILLIGSLNSTMFSASRYL 322
Cdd:COG0531 220 RNIPRAIILSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGpWGAILIALGALLSLLGALNASILGASRLL 299

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695 323 QAVSRQGHIPSAISGIAPNCDSPRVALLVHILIAIAVSFLGDP--DKLINYVAFAQWSQRAFTMSALLYLRIRGRPRHPD 400
Cdd:COG0531 300 YAMARDGLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGAAsfTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRP 379

                       410       420
                ....*....|....*....|...
gi 32566695 401 RIQLPIIMPILFFLVCTSMVVIS 423
Cdd:COG0531 380 FRVPLPLIPILGILLCLFLLYLL 402
AA_permease_2 pfam13520
Amino acid permease;
21-425 2.18e-27

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 114.33  E-value: 2.18e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    21 GLLGAISYIVGNIVGSGIFITPtsiieNVNSVGLSLAIWILAAFI--SMLGSFCYVELGTSIRLSGGDFAYLCFMkWYPV 98
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAP-----LVASGGPALIVWGWIAAIifSLAVGLVYAELSSALPRSGGIYVYLENA-FGKF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    99 AFAFMCIGCTINYPATLAVQAQTFAEYVFRGAGVELDETSefWAKKLLGFSLIILLMFMNFFSLKTFVQRFSILASLAKI 178
Cdd:pfam13520  76 VAFLAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTT--WLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLL 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   179 AATLLIIITGFYYLIFKHwkQNLEEPFKGSNWNPGP--FVNALFAGLFSYDGWDILNFGAEEieNPKRTMPLSIIIGMTC 256
Cdd:pfam13520 154 LPLILIIILGLVTADGGG--FNLLSGEWHTFFPDGWpgVFAGFLGVLWSFTGFESAANVSEE--VKKRNVPKAIFIGVII 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   257 IGVIYVAVNVAYSIVLSPTEMIASN----AVAIDFANKTLGAAAFVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGHIP 332
Cdd:pfam13520 230 VGVLYILVNIAFFGVVPDDEIALSSglgqVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLP 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   333 SAISGIAPNC-DSPRVALLVHILIAIAVSFL-----GDPDKLINYVAFAQWSqrAFTMSALLYLRIRGRPRHPDRIQLPI 406
Cdd:pfam13520 310 FSRFFAKVNKfGSPIRAIILTAILSLILLLLfllspAAYNALLSLSAYGYLL--SYLLPIIGLLILRKKRPDLGRIPGRW 387

                         410
                  ....*....|....*....
gi 32566695   407 IMPILFFLVCTSMVVISII 425
Cdd:pfam13520 388 PVAIFGILFSLFLIVALFF 406
frlA PRK11357
amino acid permease;
18-393 3.14e-23

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 102.24  E-value: 3.14e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   18 QKMGLLGAISYIVGNIVGSGIFITPTSIIENVNSVGLSLAIWILAAFISMLGSFCYVELGTSIRLSGGDFAYLCFMKWYP 97
Cdd:PRK11357   8 RKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRP 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   98 VAFAFMCIGCTINYPATLAVQAQTFAEYVFRGAGVELdetsefWAKKLLGFSLIILLMFMNFFSLKTFVqRFSILASLAK 177
Cdd:PRK11357  88 LAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDP------LLGKFIAAGLIIAFMLLHLRSVEGGA-AFQTLITIAK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  178 IAATLLIIITGFYYLIfkhwKQNLEEPFKGSNWNPGPFVnALFAGL----FSYDGWDILNFGAEEIENPKRTMPLSIIIG 253
Cdd:PRK11357 161 IIPFTIVIGLGIFWFK----AENFAAPTTTAIGATGSFM-ALLAGIsatsWSYTGMASICYMTGEIKNPGKTMPRALIGS 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  254 MTCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLG---AAAFVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGH 330
Cdd:PRK11357 236 CLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPAlgsTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNL 315

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 32566695  331 IPSAISGIAPNCDSPRVALLVHILIAIAVSFLGDPDKLINYVAFAQWSQRAFTMSALLYLRIR 393
Cdd:PRK11357 316 FFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKR 378
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 18-482 2.74e-95

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 298.58  E-value: 2.74e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    18 QKMGLLGAISYIVGNIVGSGIFITPTSIIENVNSVGLSLAIWILAAFISMLGSFCYVELGTSIRLSGGDFAYLCFMKWYP 97
Cdd:TIGR00911  42 KEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPL 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    98 VAFAFMCIGCTINYPATLAVQAQTFAEYVFRGAGVELDETSefWAKKLLGFSLIILLMFMNFFSLK--TFVQrfsILASL 175
Cdd:TIGR00911 122 LAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEVPE--WAIRLVAVLCVLLLTLVNCLSVKwaTRVQ---DIFTA 196

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   176 AKIAATLLIIITGFYYLIFKHWKQ-NLEEPFKGSNWNPGPFVNALFAGLFSYDGWDILNFGAEEIENPKRTMPLSIIIGM 254
Cdd:TIGR00911 197 CKLLALLLIIITGWVQLGKGGVESlNPKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISM 276

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   255 TCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLGAAAFVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGHIPSA 334
Cdd:TIGR00911 277 PIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSL 356

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   335 ISGIAPNCDSPRVALLVHILIAIAVSFLGDPDKLINYVAFAQWSQRAFTMSALLYLRiRGRPRHPDRIQLPIIMPILFFL 414
Cdd:TIGR00911 357 LSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLR-YKRPEMNRPIKVPLFFPVFFLL 435

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 32566695   415 VCTSMVVISIIDDFKSSAVGLGILLGGLIIFIIFVWDRALPSShtFRNATHvineESTKFMQIIFNVV 482
Cdd:TIGR00911 436 SCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKW--FRYLIV----SKTVLLQKVLEVV 497
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
9-423 6.49e-51

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 180.09  E-value: 6.49e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   9 ASMPDDSRSQKMGLLGAISYIVGNIVGSGIFITPTSIIENVNsvGLSLAIWILAAFISMLGSFCYVELGTSIRLSGGDFA 88
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAG--PAAILAWLIAGLLALLVALSYAELASAFPRAGGAYT 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  89 YLC-----FMKWYpVAFAFMcigctINYPATLAVQAQTFAEYvfrgagveLDETSEFWAKKLLGFSLIILLMFMNFFSLK 163
Cdd:COG0531  80 YARralgpLLGFL-AGWALL-----LSYVLAVAAVAVAFGGY--------LSSLFPAGGSVLIALVLILLLTLLNLRGVK 145

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695 164 TFVqRFSILASLAKIAATLLIIITGFYYLIFKHWkqnleEPFKGSNWNPGPFVNALFAGLFSYDGWDILNFGAEEIENPK 243
Cdd:COG0531 146 ESA-KVNNILTVLKLLVLLLFIVVGLFAFDPANF-----TPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPK 219

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695 244 RTMPLSIIIGMTCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLG-AAAFVVPVMVAILLIGSLNSTMFSASRYL 322
Cdd:COG0531 220 RNIPRAIILSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGpWGAILIALGALLSLLGALNASILGASRLL 299

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695 323 QAVSRQGHIPSAISGIAPNCDSPRVALLVHILIAIAVSFLGDP--DKLINYVAFAQWSQRAFTMSALLYLRIRGRPRHPD 400
Cdd:COG0531 300 YAMARDGLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGAAsfTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRP 379

                       410       420
                ....*....|....*....|...
gi 32566695 401 RIQLPIIMPILFFLVCTSMVVIS 423
Cdd:COG0531 380 FRVPLPLIPILGILLCLFLLYLL 402
AA_permease_2 pfam13520
Amino acid permease;
21-425 2.18e-27

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 114.33  E-value: 2.18e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    21 GLLGAISYIVGNIVGSGIFITPtsiieNVNSVGLSLAIWILAAFI--SMLGSFCYVELGTSIRLSGGDFAYLCFMkWYPV 98
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAP-----LVASGGPALIVWGWIAAIifSLAVGLVYAELSSALPRSGGIYVYLENA-FGKF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    99 AFAFMCIGCTINYPATLAVQAQTFAEYVFRGAGVELDETSefWAKKLLGFSLIILLMFMNFFSLKTFVQRFSILASLAKI 178
Cdd:pfam13520  76 VAFLAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTT--WLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLL 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   179 AATLLIIITGFYYLIFKHwkQNLEEPFKGSNWNPGP--FVNALFAGLFSYDGWDILNFGAEEieNPKRTMPLSIIIGMTC 256
Cdd:pfam13520 154 LPLILIIILGLVTADGGG--FNLLSGEWHTFFPDGWpgVFAGFLGVLWSFTGFESAANVSEE--VKKRNVPKAIFIGVII 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   257 IGVIYVAVNVAYSIVLSPTEMIASN----AVAIDFANKTLGAAAFVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGHIP 332
Cdd:pfam13520 230 VGVLYILVNIAFFGVVPDDEIALSSglgqVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLP 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   333 SAISGIAPNC-DSPRVALLVHILIAIAVSFL-----GDPDKLINYVAFAQWSqrAFTMSALLYLRIRGRPRHPDRIQLPI 406
Cdd:pfam13520 310 FSRFFAKVNKfGSPIRAIILTAILSLILLLLfllspAAYNALLSLSAYGYLL--SYLLPIIGLLILRKKRPDLGRIPGRW 387

                         410
                  ....*....|....*....
gi 32566695   407 IMPILFFLVCTSMVVISII 425
Cdd:pfam13520 388 PVAIFGILFSLFLIVALFF 406
frlA PRK11357
amino acid permease;
18-393 3.14e-23

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 102.24  E-value: 3.14e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   18 QKMGLLGAISYIVGNIVGSGIFITPTSIIENVNSVGLSLAIWILAAFISMLGSFCYVELGTSIRLSGGDFAYLCFMKWYP 97
Cdd:PRK11357   8 RKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRP 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   98 VAFAFMCIGCTINYPATLAVQAQTFAEYVFRGAGVELdetsefWAKKLLGFSLIILLMFMNFFSLKTFVqRFSILASLAK 177
Cdd:PRK11357  88 LAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDP------LLGKFIAAGLIIAFMLLHLRSVEGGA-AFQTLITIAK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  178 IAATLLIIITGFYYLIfkhwKQNLEEPFKGSNWNPGPFVnALFAGL----FSYDGWDILNFGAEEIENPKRTMPLSIIIG 253
Cdd:PRK11357 161 IIPFTIVIGLGIFWFK----AENFAAPTTTAIGATGSFM-ALLAGIsatsWSYTGMASICYMTGEIKNPGKTMPRALIGS 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  254 MTCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLG---AAAFVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGH 330
Cdd:PRK11357 236 CLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPAlgsTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNL 315

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 32566695  331 IPSAISGIAPNCDSPRVALLVHILIAIAVSFLGDPDKLINYVAFAQWSQRAFTMSALLYLRIR 393
Cdd:PRK11357 316 FFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKR 378
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 30-391 5.02e-19

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 90.26  E-value: 5.02e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    30 VGNIVGSGIFITPTSIIENVNSVGLSLAiWILAAFISMLGSFCYVELGTSIRLSGGDFAYL--------CFMKWYPVAFA 101
Cdd:TIGR00906  40 IGSTIGAGIYVLTGEVARNDSGPAIVLS-FLISGLAAVLSGFCYAEFGARVPKAGSAYLYSyvtvgelwAFITGWNLILE 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   102 FMcigctINYPATLAVQAQTFAEYV------FRGAGVELDETSEFWAKKLLGFSLIILLMFMNFFSLKtFVQRFSILASL 175
Cdd:TIGR00906 119 YV-----IGTAAVARSWSAYFDELLnkqigqFRRTYFKLNYDGLAEYPDFFAVCLILLLAVLLSFGVK-ESAWVNKIFTA 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   176 AKIAATLLIIITGFYYLIFKHWKqnLEEPFKGSNWNPGPFVNALFAG---LFSYDGWDILNFGAEEIENPKRTMPLSIII 252
Cdd:TIGR00906 193 INILVLLFVIIAGFTKADVANWS--ITEEKGAGGFMPYGFTGVLSGAatcFFAFIGFDAIATTGEEVKNPQRAIPIGIVT 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   253 GMTCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLGAAAFVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGHIP 332
Cdd:TIGR00906 271 SLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMARDGLLF 350

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 32566695   333 SAISGIAPNCDSPRVALLVHILIAIAVSFLGDPDKLINYVAFAQWSQRAFTMSALLYLR 391
Cdd:TIGR00906 351 KWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILR 409
AA_permease pfam00324
Amino acid permease;
30-425 3.22e-14

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 74.66  E-value: 3.22e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    30 VGNIVGSGIFITPTSIIENVNSVG--LSLAIWILAAFISMLgSFCyvELGTSIRLSGGdFAYLCFMKWYPVAFAFMCIGC 107
Cdd:pfam00324   7 LGGVIGTGLFVGSGSVLGQAGPAGalLGYLISGVVIFLVML-SLG--EISTNGPVSGG-FYTYASRFLGPSLGFATGWNY 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   108 TINYPATLAVQAQTFAEYVFRgagveLDETSEFWAKKLLGFSLIILLMFMNFFSLKTFvQRFSILASLAKIAATLLIIIT 187
Cdd:pfam00324  83 WLSWITVLALELTAASILIQF-----WELVPDIPYLWVWGAVFLVLLTIINLVGVKWY-GEAEFWFALIKIIAIIGFIIV 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   188 GFYYL---------IFKHWKQNLEEPFKGSNWNpGPFVNALFAGLFSYDGWDILNFGAEEIENPKRTMPLSIIIGMTCIG 258
Cdd:pfam00324 157 GIILLsggnpndgaIFRYLGDNGGKNNFPPGFG-KGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRIT 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   259 VIYVAVNVAYSIVLSP-----TEMIASNAVAIDFANKTLGAAAFVVPVMVAIL--LIGSLNSTMFSASRYLQAVSRQGHI 331
Cdd:pfam00324 236 IFYILSLLAIGLLVPWndpglLNDSASAASPFVIFFKFLGISGLAPLINAVILtaALSAANSSLYSGSRMLYSLARDGLA 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   332 PSAISGIAPNcDSPRVALLVHILIAIAVSFLGD------PDKLINYVAFAQWSqrAFTMSALLYLRIRG----RPRHPDR 401
Cdd:pfam00324 316 PKFLKKVDKR-GVPLRAILVSMVISLLALLLASlnpaivFNFLLAISGLSGLI--VWGLISLSHLRFRKafkyQGRSIDE 392

                         410       420
                  ....*....|....*....|....
gi 32566695   402 iqLPIIMPILFFLVCTSMVVISII 425
Cdd:pfam00324 393 --LPFKAPLGPLGVILGLAAIIII 414
2A0305 TIGR00908
ethanolamine permease; The three genes used as the seed for this model (from Burkholderia ...
 53-425 3.20e-13

ethanolamine permease; The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129986 [Multi-domain]  Cd Length: 442  Bit Score: 71.80  E-value: 3.20e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    53 GLSLAIWILAAFISMLgSFCYVELGTSIRLSGGDFAYL--CFMKWYPVAFAFMCIGCTINYPATLAVQAQTFAEYVFRGA 130
Cdd:TIGR00908  41 GFVVATLLVATMYLTF-CFSLAELSTMIPTAGGGYGFArrAFGPWGGFLAGTAILIEFAFAPPAIACFIGAYCESLFPVG 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   131 GVeldetsefwakKLLGFSLIILLMFMNFFSLKTFVQRFSILASLAKIAATLLI--IITGFYYLIFkhwkqnleepFKGS 208
Cdd:TIGR00908 120 PG-----------WLAALVFYIVFIGINILGVGEAAKLEFVVTAVAIIALGVFIgaMVPHFDSANL----------FNGP 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   209 NWNPGPFVNALFAGLFSYDGWDILNF--------GAEEIENPKRTMPLSIIIGMTCIGVIYVAVNVAYSIVLSPTEMIAS 280
Cdd:TIGR00908 179 QTGASSFLPGAYVGVFAAIPFAIWFFlavegvamAAEETKNPKRDIPRGLIGAILTLLALAAGILVVGPGAADAKELMGS 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   281 NAVAIDFANKTLGAAAFVVPVMVAILLIG---SLNSTMFSASRYLQAVSRQGHIPSAISGIAPNcDSPRVALLVHILIAI 357
Cdd:TIGR00908 259 NNPLPEALESIYGGSTWMSQFVNLVGLFGliaSFHGIIYGYSRQIFALSRAGYLPESLSKVNRK-KAPVLAIVVPGVIGF 337

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   358 AVSFLGDPDKLINYVAFAQWSQRAFTMSALLYLRIRgRPR--HPDRIQLPIIMPIlFFLVCTSMVVISII 425
Cdd:TIGR00908 338 GLSLTGQTALIILVSVFGAIISYVLSMAAHFTLRIR-RPDmeRPYRTPGGILTPG-VALVLACVALVTGF 405
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
151-362 3.63e-07

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 52.48  E-value: 3.63e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695 151 IILLMFMNFFSLKTFVQRFSILASLaKIAATLLIIITGFYyLIFKhwkQNLEEPFKGSNWNP--GPFVNALFAGL----- 223
Cdd:COG0833 135 LALIFLLNALSVKAFGESEFWFSLI-KVITVIAFIIVGLL-MIFG---IIGGHAPGFSNFTTgdGPFPGGFLAILgvmmi 209

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695 224 --FSYDGWDILNFGAEEIENPKRTMPLSI-----------IIGMTCIGVIyvavnVAY---SIVLSPTEMIASNAvAIDF 287
Cdd:COG0833 210 vgFSFQGTELIGIAAGESENPEKTIPKAIrqvfwrillfyILAIFVIAAL-----IPYtdaGVAESPFTLVFERA-GIPY 283

                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 32566695 288 AnktlgAAAFVVPVMVAILLIGslNSTMFSASRYLQAVSRQGHIPSAISGIAPNCdSPRVALLVHILIAiAVSFL 362
Cdd:COG0833 284 A-----ADIMNAVILTAVLSAG--NSGLYASTRMLWSLAKEGMAPKIFAKLNKRG-VPLNALLATMAVG-LLALL 349
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 30-332 1.59e-06

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 50.75  E-value: 1.59e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    30 VGNIVGSGIFITPTSIIENVNSVGLSLAiWILAAFISMLGSFCYVELGTSIRLSGGDFAYLCfMKWYPVAFAFM-----C 104
Cdd:TIGR00913  14 LGGTIGTGLLVGSGTALATGGPAGLLIG-YAIMGSIIYCVMQSLGEMATFYPVVSGSFATYA-SRFVDPAFGFAvgwnyW 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   105 IGCTINYPATLAVQAQTFaeyvfrgagveldetsEFWAKK--LLGFSLI--ILLMFMNFFSLKTFVQRFSILASLaKIAA 180
Cdd:TIGR00913  92 LQWLIVLPLELVTASMTI----------------QYWTDKvnPAVWIAIfyVFIVIINLFGVKGYGEAEFWFSSI-KILA 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   181 TLLIIITGFY----------YLIFKHWKqnleepfkgsnwNPGPFVNALFAG------------LFSYDGWDILNFGAEE 238
Cdd:TIGR00913 155 IIGFIILSIIlncgggpnhgYIGFRYWH------------DPGAFAGGTIGGrfkgvcsvfvtaAFSFGGTELVALTAGE 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   239 IENPKRTMPLSI------IIGMTCIGVIYVAVNVAYS----IVLSPTEMIASNAVAIDFANKTLGAAAFVVPVMVAILLI 308
Cdd:TIGR00913 223 AANPRKSIPRAAkrtfwrILVFYILTLFLIGFLVPYNdprlLSSSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVL 302

                         330       340
                  ....*....|....*....|....
gi 32566695   309 GSLNSTMFSASRYLQAVSRQGHIP 332
Cdd:TIGR00913 303 SAANSSLYASSRTLYALAHQGLAP 326
PRK10644 PRK10644
arginine/agmatine antiporter;
11-333 2.12e-05

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 47.09  E-value: 2.12e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   11 MPDDSRSQKMGLLGAISYIVGNIVGSGIFITPTSIienVNSVGLSLAIWILAAFISMLGSFCYVELGTSIRLSGGDFAYL 90
Cdd:PRK10644   1 MSSDADAHKVGLIPVTLMVAGNIMGSGVFLLPANL---ASTGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYA 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   91 cfMKWYPVAFAFMC-----IGCTINYPAtLAVQAQTFAEYVFrgagvelDETSEFWAKKLLGFSLIILLMFMNFFSLKtF 165
Cdd:PRK10644  78 --RRCFGPFLGYQTnvlywLACWIGNIA-MVVIGVGYLSYFF-------PILKDPLVLTITCVVVLWIFVLLNIVGPK-M 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  166 VQRFSILASLAKIAATLLIIITGFYYL----IFKHWKQNLEEPFkgsnwnpGPFVNALFAGLFSYDGWDILNFGAEEIEN 241
Cdd:PRK10644 147 ITRVQAVATVLALIPIVGIAVFGWFWFrgetYMAAWNVSGLGTF-------GAIQSTLNVTLWSFIGVESASVAAGVVKN 219

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  242 PKRTMPLSIIIGMTCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLG-AAAFVVPVMVAILLIGSLNSTMFSASR 320
Cdd:PRK10644 220 PKRNVPIATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARMALGdTAGAIVSFCAAAGCLGSLGGWTLLAGQ 299

                        330
                 ....*....|...
gi 32566695  321 YLQAVSRQGHIPS 333
Cdd:PRK10644 300 TAKAAADDGLFPP 312
PRK11021 PRK11021
putative transporter; Provisional
 236-362 2.23e-05

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 46.83  E-value: 2.23e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  236 AEEIENPKRTMPLSIIIGMTCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLGAAAFVVPVMVAIL-LIGSLNST 314
Cdd:PRK11021 200 ASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAYGDKQAAAASLPGIFVQLFGGYALWVICVIGYLaCFASVNIY 279

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 32566695  315 MFSASRYLQAVSRQGHIPSAISGIAPNcDSPRVALLVhILIAIAVSFL 362
Cdd:PRK11021 280 TQSFARLVWSQAREGRPPSYLARLSAR-GVPVNALNA-VLGCCAVSIL 325
cadB PRK10435
cadaverine/lysine antiporter;
15-315 4.31e-05

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 45.90  E-value: 4.31e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   15 SRSQKMGLLGAISYIVGNIVGSGIFITPTsiieNVNSVGlSLAI--WILAAFISMLGSFCYVELGTSIRLSGGDFAYLCF 92
Cdd:PRK10435   2 SSAKKIGLFACTGVVAGNMMGSGIALLPA----NLASIG-SIAIwgWIISIIGAMSLAYVYARLATKNPQQGGPIAYAGE 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   93 MKwypVAFAFM--CIGCTINYPATLAVqAQTFAEYVfrgagveldetSEFWA----KKLLGFSLIILLMFMNFFSL--KT 164
Cdd:PRK10435  77 IS---PAFGFQtgVLYYHANWIGNLAI-GITAVSYL-----------STFFPvlndPIPAGIACIAIVWVFTFVNMlgGT 141

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  165 FVQRFSILASLAKIAATLLIIITGFYYLIFKHWKQNLEEPfkgSNWNPGPFVNALFAGLFSYDGWDILNFGAEEIENPKR 244
Cdd:PRK10435 142 WVSRLTTIGLVLVLIPVVGTAIVGWHWFDAATYAANWNTS---DTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKR 218

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 32566695  245 TMPLSIIIGMTCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLGA-AAFVVPVMVAILLIGSLNSTM 315
Cdd:PRK10435 219 TVPLATMLGTGLAGIIYIAATQVISGMFPASVMAASGAPFAISASTILGNwAAPLVSAFTAFACLTSLGSWM 290
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 141-336 6.63e-05

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 45.49  E-value: 6.63e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  141 WAKKLLgfsLIILLMFMNFFSLKTFVQrFSILASLAKIAATLLIIITGFYyLIFKHWKQNLEEPFKGSN-WNPGPF---- 215
Cdd:PRK11049 135 WVASLA---VVLLLLSLNLATVKMFGE-MEFWFAMIKIVAIVALIVVGLV-MVAMHFQSPTGVEASFAHlWNDGGMfpkg 209

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  216 VNALFAG----LFSYDGWDILNFGAEEIENPKRTMPLSIIIGMTCIGVIYVAVNVAYSIVLSPTEMIASNAVAID-FANK 290
Cdd:PRK11049 210 LSGFFAGfqiaVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVElFVLV 289

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 32566695  291 TLGAAAFVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGHIPSAIS 336
Cdd:PRK11049 290 GLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFA 335
potE PRK10655
putrescine transporter; Provisional
 15-351 1.65e-04

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 44.25  E-value: 1.65e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   15 SRSQKMGLLGAISYIVGNIVGSGIFITPTSIIEnvnsVG-LSLAIWILAAFISMLGSFCYVELGTSIRLSGGDFAYL--C 91
Cdd:PRK10655   3 AKSNKMGVVQLTILTAVNMMGSGIIMLPTKLAQ----VGtISILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAeyA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   92 FMKwypvAFAFMCigcTINYPATLAVqaqtfaeyvfrgAGVELDETSEFWAKKLLGFSL---------IILLMFMNF--F 160
Cdd:PRK10655  79 FGK----SGNFMA---NYTYGVSLLI------------ANVAIAISAVGYGTELFGATLspvqiclatIGVLWLCTVanF 139

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  161 SLKTFVQRFSILASLAKIAATLLIIITGFYYLIFKHWkqnleepfkGSNWNPG--PFVNALFAGLfSYDGWDILNF---- 234
Cdd:PRK10655 140 GGARITGQISSVTVWGVIIPVVGLSIIGWFWFSPSLY---------VAAWNPHhlPFFSAVGSSI-AMTLWAFLGLesac 209

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  235 -GAEEIENPKRTMPLSIIIGMTCIGVIY-VAVNVAYSIVLSPtEMIASNA-VAIDFA---NKTLGAAafVVPVMVaILLI 308
Cdd:PRK10655 210 aNSDAVENPERNVPIAVLGGTLGAAVIYiVSTNVIAGIVPNM-ELANSTApFGLAFAqmfNPTVGKI--VMALMV-MSCC 285

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 32566695  309 GSLNSTMFSASRYLQAVSRQGHIPSAISGIAPNcDSPRVALLV 351
Cdd:PRK10655 286 GSLLGWQFTIAQVFKSSADEGYFPKIFSRVTKV-DAPVQGMLI 327
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 59-363 1.10e-03

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 41.66  E-value: 1.10e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695    59 WILAAFISMLGSFCYVELGTSIRLSGGDFAYLCFM---KWYPVAfAFMCigCTINYPATLAVQAQT-FAEYVFRGAGVEL 134
Cdd:TIGR00907  53 WIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLappRQMPFA-SWMT--GWFNLAGQVAGTASTdLSVAQLILGIVSL 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   135 D-ETSEF----WAKKLLGFSLIILLMFMNFFSLK--TFVQRFSILASLAKIAATLLIIitgfyyLIFKHWKQNLEE---- 203
Cdd:TIGR00907 130 TtPGREYiptrWHIFGIMIGIHLIHALINSLPTKwlPRITSSAAYWSLLGFLTICITL------LACKSPKFNDGKfvft 203

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   204 ---PFKGSNWNPG-PFVNALFAGLFSYDGWDILNFGAEEIENPKRTMPlSIIIGMTCIGV----IYVAVnVAYSI----- 270
Cdd:TIGR00907 204 nfnNSTGGWKPGGfAFLLGLLNPAWSMTGYDGTAHMAEEIENPEVVGP-RAIIGAVAIGIvtgfCFNIV-LFFSMgdids 281

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   271 VLSPTEMIASNAVAIDFANKTLGAAAFVVPVMVAILLIGSlnSTMFSASRYLQAVSRQGHIPSA--ISGIAPNCDSPRVA 348
Cdd:TIGR00907 282 LISSTTGQPIAQIFYNALGNKAGAIFLLCLILVTSFFCAI--TCMTANSRMIYAFSRDGGLPFSplWSRVNPRTQVPLNA 359

                         330
                  ....*....|....*
gi 32566695   349 LLVHILIAIAVSFLG 363
Cdd:TIGR00907 360 VWLSAVWIILIGLLG 374
PRK10238 PRK10238
aromatic amino acid transporter AroP;
30-373 2.56e-03

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 40.32  E-value: 2.56e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695   30 VGNIVGSGIFITPTSIIENVN-SVGLSLAIWILAAFISM--LGSFCYVELgtsirlSGGDFAYLCFMKWYpvAFAFMCIG 106
Cdd:PRK10238  24 LGGAIGTGLFLGSASVIQSAGpGIILGYAIAGFIAFLIMrqLGEMVVEEP------VAGSFSHFAYKYWG--SFAGFASG 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  107 CtiNYPATLAVQAqtFAEYVFRGAGVEldetseFWAKKLLGF----SLIILLMFMNFFSLKTFVQrFSILASLAKIAATL 182
Cdd:PRK10238  96 W--NYWVLYVLVA--MAELTAVGKYIQ------FWYPEIPTWvsaaVFFVVINAINLTNVKVFGE-MEFWFAIIKVIAVV 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  183 LIIITGFYYLIFKHWK-----QNLeepfkgsnWNPGPFVNALFAGL--------FSYDGWDILNFGAEEIENPKRTMPLS 249
Cdd:PRK10238 165 AMIIFGGWLLFSGNGGpqatvSNL--------WDQGGFLPHGFTGLvmmmaiimFSFGGLELVGITAAEADNPEQSIPKA 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  250 IIIGMTCIGVIYVAvNVAYSIVLSPTEMIASNAVAIDFANKTLGaAAFVVPVMVAILLIGSL---NSTMFSASRYLQAVS 326
Cdd:PRK10238 237 TNQVIYRILIFYIG-SLAVLLSLMPWTRVTADTSPFVLIFHELG-DTFVANALNIVVLTAALsvyNSCVYCNSRMLFGLA 314

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 32566695  327 RQGHIPSAISGIapncdSPRVALLVHILIAIAVSFLGdpdKLINYVA 373
Cdd:PRK10238 315 QQGNAPKALASV-----DKRGVPVNTILVSALVTALC---VLINYLA 353
proY PRK10580
putative proline-specific permease; Provisional
 149-339 9.82e-03

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 38.65  E-value: 9.82e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  149 SLIILLMFMNFFSLKTFVQrFSILASLAKIAATLLIIITGFYYLIFKhwKQNLEEPFKGSN-WNPGPFVNALFAG----- 222
Cdd:PRK10580 129 SVVLIICAVNLMSVKVFGE-LEFWFSFFKVATIIIMIVAGIGIIIWG--IGNGGQPTGIHNlWSNGGFFSNGWLGmvmsl 205

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32566695  223 ---LFSYDGWDILNFGAEEIENPKRTMPLSIIIGMTCIGVIYVA-VNVAYSIVlsPTEMIASNA--VAIDFANKTLGAAA 296
Cdd:PRK10580 206 qmvMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGtLFVIMSIY--PWNQVGTNGspFVLTFQHMGITFAA 283

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 32566695  297 FVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGHIPSAISGIA 339
Cdd:PRK10580 284 SILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTS 326
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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