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Conserved domains on  [gi|392901762|ref|NP_502715|]
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Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase [Caenorhabditis elegans]

Protein Classification

DUF1647 domain-containing protein( domain architecture ID 10544652)

DUF1647 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1647 pfam07801
Protein of unknown function (DUF1647); The sequences making up this family are all derived ...
 40-178 4.87e-64

Protein of unknown function (DUF1647); The sequences making up this family are all derived from hypothetical proteins expressed by C. elegans. The region in question is approximately 160 amino acids long. The GO annotation for this protein indicates the protein to be involved in nematode larval development and to have a positive regulation on growth rate.


:

Pssm-ID: 369527  Cd Length: 141  Bit Score: 199.75  E-value: 4.87e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392901762   40 CMCKSNRSSISYDFCYTDPQNTSIIGKKFDCSLLDTLENLNLLGETKEVFSLSNLIQNENDLIFASATSDDHFNFSMDSF 119
Cdd:pfam07801   1 CCCKSRKTGKSYDFCYKDPQNSSSIGKKFDCSLLTTLEDLKLLETPEPFVDLSEIIKNEDDVVFVSATSDDHFFNADSSI 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 392901762  120 HSIRKYYPNHTYILYGLGLSEYYINSLPD--NLEFRQFNTSGYPSFVNTWMHYNFKPLILA 178
Cdd:pfam07801  81 SSIRKYYPHHKYILYGLNLSYYYISLLPKdpNFEFRVFNTSKYPKYVTNWMEYRFKPLILA 141
 
Name Accession Description Interval E-value
DUF1647 pfam07801
Protein of unknown function (DUF1647); The sequences making up this family are all derived ...
 40-178 4.87e-64

Protein of unknown function (DUF1647); The sequences making up this family are all derived from hypothetical proteins expressed by C. elegans. The region in question is approximately 160 amino acids long. The GO annotation for this protein indicates the protein to be involved in nematode larval development and to have a positive regulation on growth rate.


Pssm-ID: 369527  Cd Length: 141  Bit Score: 199.75  E-value: 4.87e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392901762   40 CMCKSNRSSISYDFCYTDPQNTSIIGKKFDCSLLDTLENLNLLGETKEVFSLSNLIQNENDLIFASATSDDHFNFSMDSF 119
Cdd:pfam07801   1 CCCKSRKTGKSYDFCYKDPQNSSSIGKKFDCSLLTTLEDLKLLETPEPFVDLSEIIKNEDDVVFVSATSDDHFFNADSSI 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 392901762  120 HSIRKYYPNHTYILYGLGLSEYYINSLPD--NLEFRQFNTSGYPSFVNTWMHYNFKPLILA 178
Cdd:pfam07801  81 SSIRKYYPHHKYILYGLNLSYYYISLLPKdpNFEFRVFNTSKYPKYVTNWMEYRFKPLILA 141
 
Name Accession Description Interval E-value
DUF1647 pfam07801
Protein of unknown function (DUF1647); The sequences making up this family are all derived ...
 40-178 4.87e-64

Protein of unknown function (DUF1647); The sequences making up this family are all derived from hypothetical proteins expressed by C. elegans. The region in question is approximately 160 amino acids long. The GO annotation for this protein indicates the protein to be involved in nematode larval development and to have a positive regulation on growth rate.


Pssm-ID: 369527  Cd Length: 141  Bit Score: 199.75  E-value: 4.87e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392901762   40 CMCKSNRSSISYDFCYTDPQNTSIIGKKFDCSLLDTLENLNLLGETKEVFSLSNLIQNENDLIFASATSDDHFNFSMDSF 119
Cdd:pfam07801   1 CCCKSRKTGKSYDFCYKDPQNSSSIGKKFDCSLLTTLEDLKLLETPEPFVDLSEIIKNEDDVVFVSATSDDHFFNADSSI 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 392901762  120 HSIRKYYPNHTYILYGLGLSEYYINSLPD--NLEFRQFNTSGYPSFVNTWMHYNFKPLILA 178
Cdd:pfam07801  81 SSIRKYYPHHKYILYGLNLSYYYISLLPKdpNFEFRVFNTSKYPKYVTNWMEYRFKPLILA 141
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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