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Conserved domains on  [gi|17540694|ref|NP_502481|]
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CUB-like domain-containing protein [Caenorhabditis elegans]

Protein Classification

CUB domain-containing protein( domain architecture ID 10493345)

CUB (complement C1r/C1s, Uegf, Bmp1) domain-containing protein similar to Caenorhabditis elegans CUB-like domain-containing protein

CATH:  2.60.120.290
Gene Ontology:  GO:0005576
PubMed:  8510165|9334740
SCOP:  4002562

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CUB_2 pfam02408
CUB-like domain; This is a family of hypothetical C. elegans proteins. The aligned region has ...
 17-135 9.84e-36

CUB-like domain; This is a family of hypothetical C. elegans proteins. The aligned region has no known function nor do any of the proteins which possess it. However, this domain is related to the CUB domain.


:

Pssm-ID: 280554  Cd Length: 120  Bit Score: 125.95  E-value: 9.84e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17540694    17 ATGNGCKLGN-AINKPVIDGQPFYWPASWNETQPAPQLEKEQSCSWIVTIPRGYYAKLIISGKTTDkDSRFQTVDSAGNL 95
Cdd:pfam02408   1 AAGFTCPSGTiTINKPVNGSIPVYYPNTWNGSMEPPKIPANQNCSWNINVPKGYYAKVIISAKTND-DSSITVTDSLGNS 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 17540694    96 IQTTHEKMEPYYFPASKFTLAVS-NEGFATLGFKVVWFPLP 135
Cdd:pfam02408  80 EYVTDSDNEPYFFVSPSFTINLStGSGSVSFGFKVQWSPYP 120
 
Name Accession Description Interval E-value
CUB_2 pfam02408
CUB-like domain; This is a family of hypothetical C. elegans proteins. The aligned region has ...
 17-135 9.84e-36

CUB-like domain; This is a family of hypothetical C. elegans proteins. The aligned region has no known function nor do any of the proteins which possess it. However, this domain is related to the CUB domain.


Pssm-ID: 280554  Cd Length: 120  Bit Score: 125.95  E-value: 9.84e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17540694    17 ATGNGCKLGN-AINKPVIDGQPFYWPASWNETQPAPQLEKEQSCSWIVTIPRGYYAKLIISGKTTDkDSRFQTVDSAGNL 95
Cdd:pfam02408   1 AAGFTCPSGTiTINKPVNGSIPVYYPNTWNGSMEPPKIPANQNCSWNINVPKGYYAKVIISAKTND-DSSITVTDSLGNS 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 17540694    96 IQTTHEKMEPYYFPASKFTLAVS-NEGFATLGFKVVWFPLP 135
Cdd:pfam02408  80 EYVTDSDNEPYFFVSPSFTINLStGSGSVSFGFKVQWSPYP 120
 
Name Accession Description Interval E-value
CUB_2 pfam02408
CUB-like domain; This is a family of hypothetical C. elegans proteins. The aligned region has ...
 17-135 9.84e-36

CUB-like domain; This is a family of hypothetical C. elegans proteins. The aligned region has no known function nor do any of the proteins which possess it. However, this domain is related to the CUB domain.


Pssm-ID: 280554  Cd Length: 120  Bit Score: 125.95  E-value: 9.84e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17540694    17 ATGNGCKLGN-AINKPVIDGQPFYWPASWNETQPAPQLEKEQSCSWIVTIPRGYYAKLIISGKTTDkDSRFQTVDSAGNL 95
Cdd:pfam02408   1 AAGFTCPSGTiTINKPVNGSIPVYYPNTWNGSMEPPKIPANQNCSWNINVPKGYYAKVIISAKTND-DSSITVTDSLGNS 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 17540694    96 IQTTHEKMEPYYFPASKFTLAVS-NEGFATLGFKVVWFPLP 135
Cdd:pfam02408  80 EYVTDSDNEPYFFVSPSFTINLStGSGSVSFGFKVQWSPYP 120
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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