|
Name |
Accession |
Description |
Interval |
E-value |
| HycE2 |
COG3261 |
Ni,Fe-hydrogenase III large subunit [Energy production and conversion]; |
55-537 |
0e+00 |
|
Ni,Fe-hydrogenase III large subunit [Energy production and conversion];
Pssm-ID: 442492 [Multi-domain] Cd Length: 479 Bit Score: 588.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 55 GWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERR 134
Cdd:COG3261 1 LALAALALLLALDLAAGGALFGLRLEAEDELLLLLLLAAGVLLLLPTPPPSSSAPAAAAARRERARERLGGEEGGGPPRR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 135 LVLPDDWPDELYPLRKDSMDYRQRPAPTTDAetYEFINELGDKKNnVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLF 214
Cdd:COG3261 81 RLLLPDGWPPLPPPPLRPPPPPRGPPPPPPE--EPEMKVEGEGVH-EIPVGPVHAGLIEPGHFRFSVEGERILDLEIRLG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 215 YVHRGMEKLAETRmGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHF 294
Cdd:COG3261 158 YVHRGIEKLAEGR-DYEQALYLAERICGICSVAHALAYCQAVEKAAGIEVPPRAQYLRVILLELERIHSHLLDLGALAND 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 295 TGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTV 374
Cdd:COG3261 237 VGFETLFMQCWRLRERVLDLNEALTGNRVLRGINVPGGVRRDLDPEQLKAILERLDELEEEVKELVDLFLNDPSVLDRLV 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 375 GIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPG 454
Cdd:COG3261 317 GTGVLSKEDARDLGAVGPVARASGVDRDVRRDHPYAAYDELDFKVVTETEGDVYARALVRLEEIFESLDLIRQALEKLPE 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 455 GPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSC 534
Cdd:COG3261 397 GPIRVPVPGLPPDGEGLGRVEAPRGELVHYVRTDGDGRLERVKIRTPSFANWPALELALRGNIVADFPLINKSFDPCYSC 476
|
...
gi 15832831 535 TDR 537
Cdd:COG3261 477 TDR 479
|
|
| HycE1 |
COG3262 |
Ni,Fe-hydrogenase III component G [Energy production and conversion]; |
11-534 |
1.37e-149 |
|
Ni,Fe-hydrogenase III component G [Energy production and conversion];
Pssm-ID: 442493 [Multi-domain] Cd Length: 523 Bit Score: 440.54 E-value: 1.37e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 11 LAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEkGTKCWVTV 90
Cdd:COG3262 4 PEELRARFGGSILERRWVRPNEVWVEVDREDLPELAEFLAEGGGGRLAALWGNDERELGGGFAVYYVFALE-GEGALVTL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 91 RVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRqRPAPTTDAETYEF 170
Cdd:COG3262 83 KVSVPKDDPVFPSITDLFPAASWYEREIRDLFGIVPEGHPDPRRLVLHDDWPEGIYPLRKDFKGGP-RPAPAPAEEYFRP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 171 INELGDKknNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGFAHST 250
Cdd:COG3262 162 VEGEGIE--VVVVGPVHAGIIEPGHFFFSVGGEIVIRLEELLYYVHKGEEKLEEGEEGRAGLVLAEAAGGDSGAAAAAAA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 251 AYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLI 330
Cdd:COG3262 240 AAAAEAAAAAAIPPRAALLRLLRLLLERLELHLGLLGLGGLDAGGAGAAGAAALLRRRLERLLEALLLRRGRRGGGGGGG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 331 GGIRRDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFV 410
Cdd:COG3262 320 GGRDDDDLLADLILELLLDLEEEEEELEELADLLSRLIDRLDTTGGLALKAAAAGGVGGAAGRASGGRGDRRRRAPYAAY 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 411 GYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDN 490
Cdd:COG3262 400 DDVDLRVVVLTVGDVDVRRARVREELEEISRLIIILLDLLLLGPGGLLVGGEPAPAEGGGGGGGLRGGGGEGVRGGGGDA 479
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 15832831 491 QKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSC 534
Cdd:COG3262 480 IRRRRWRRPSAANWPNPPALILPNINDDFPLNNSINSLSYGSSD 523
|
|
| NuoD |
COG0649 |
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; ... |
181-537 |
9.01e-84 |
|
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440414 [Multi-domain] Cd Length: 390 Bit Score: 266.17 E-value: 9.01e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 181 VVPIGPLHvtsdeP---GHFRLFV--DGENIIDADYRLFYVHRGMEKLAETRMgYNEVTFLSDRVCGICGFAHSTAYTTS 255
Cdd:COG0649 8 VLNMGPQH-----PsthGVLRLVLelDGETVVDADPHIGYLHRGFEKLAENRT-YTQIIPYTDRLDYLSPMNNELAYVLA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 256 VENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRR 335
Cdd:COG0649 82 VEKLLGIEVPERAQYIRVILAELNRIASHLLWLGTYALDLGAMTPFLYAFREREKILDLFEEVTGARMTHNYFRIGGVRR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 336 DLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLL 415
Cdd:COG0649 162 DLPDGFLEKVREFLDYFPKRLDEYEDLLTGNRIFKARTKGVGVLSAEDAIALGVTGPVLRASGVDYDLRKDEPYSGYDEL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 416 PMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTYIP--------------HRFAL---GF----- 473
Cdd:COG0649 242 DFDVPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPEGPVMAKDPKIAPppkeemktsmealiHHFKLvteGFkvpag 321
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15832831 474 -----AEAPRG--------DdihwsmtGDNqKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:COG0649 322 evyaaVESPRGelgfylvsD-------GGT-KPYRVKIRSPSFANLQALPEMLKGHMLADVVAILGSLDIVLGEVDR 390
|
|
| PRK06075 |
PRK06075 |
NADH-quinone oxidoreductase subunit D; |
175-537 |
9.37e-72 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 180385 [Multi-domain] Cd Length: 392 Bit Score: 235.05 E-value: 9.37e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 175 GDKKNNVVPIGPLHVTSDepGHFRLFV--DGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLsDRVCGICGFAHSTAY 252
Cdd:PRK06075 2 AEIRNYTLNFGPQHPAAH--GVLRLILelDGEVVVRADPHIGYLHRGTEKLAEYRTYLQAIPYF-DRLDYVSPMNNEHAY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 253 TTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGG 332
Cdd:PRK06075 79 CLAVEKLLGIEVPERAQYIRVLFLELNRILSHLLWLGTHALDLGAMTVFLWGFREREKLLDLYEAVTGARMHHAYIRPGG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 333 IRRDlLKDDMIQ-TRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVG 411
Cdd:PRK06075 159 VRRD-LPDGLLEdIRDFLDYFPKRLDDYETLLTDNRIWKQRLVGVGVVSKERALALGFTGPMLRASGVAWDLRKSQPYEV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 412 YGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNL--PGGPLMVEGFTYIP--------------HRFAL---G 472
Cdd:PRK06075 238 YDELDFDVPVGKNGDCYDRYLVRVEEMRQSLRIIEQCLDRLrpPPGPVMVDDPKIAPparlemktsmealiHHFKLvteG 317
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15832831 473 F----------AEAPRGD-DIHWSMTGDNqKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:PRK06075 318 FrvpagevyaaVESPKGEfGVYLVSDGGN-KPYRVKIRAPSFAHLQALDEMCRGHMLADVVAIIGSLDIVFGEVDR 392
|
|
| NuoD |
TIGR01962 |
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH ... |
178-537 |
9.75e-66 |
|
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH dehydrogenase I complex. It excludes the related chain of NAD(P)H-quinone oxidoreductases from chloroplast and Synechocystis, where the quinone may be plastoquinone rather than ubiquinone. This subunit often appears as a C/D fusion. [Energy metabolism, Electron transport]
Pssm-ID: 273898 Cd Length: 386 Bit Score: 219.13 E-value: 9.75e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 178 KNNVVPIGPLHVTSDepGHFRLFV--DGENIIDADYRLFYVHRGMEKLAEtRMGYNEVTFLSDRVCGICGFAHSTAYTTS 255
Cdd:TIGR01962 1 EFMILNLGPQHPSTH--GVLRLILelDGEYVVRADPHIGYLHRGTEKLAE-NRTYQQYIPYTDRLDYLSPFSNELAYCLA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 256 VENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRR 335
Cdd:TIGR01962 78 VEKLLGIEVPRRAQVIRVMLSELNRISSHLLFIGTHALDLGAMTPFLYAFREREKILDLFEAITGARMHSAYFRIGGVAL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 336 DLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLL 415
Cdd:TIGR01962 158 DLPENWLEEIREFLEQFPKRLRDYETLLNENRIWKQRTQGVGVVSAKDALDWGLTGPMLRGSGIDWDIRKSEPYEGYDEY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 416 PMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTYIP--------------HRFAL---GF----- 473
Cdd:TIGR01962 238 DFDVPVGGNGDCYDRYLLRVLEMRESIKIIEQCLEKMPPGPIKADNPKLAPppkermltsmealiHHFKLvteGFrvpag 317
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15832831 474 -----AEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:TIGR01962 318 evyvpIESPKGELGFYIISDGGTKPYRLKIRAPSFAHLQALEAMCVGHYLADLIAILGSIDPVMGEVDR 386
|
|
| PRK13292 |
PRK13292 |
NADH-quinone oxidoreductase subunit B/C/D; |
11-537 |
1.25e-64 |
|
NADH-quinone oxidoreductase subunit B/C/D;
Pssm-ID: 183955 [Multi-domain] Cd Length: 788 Bit Score: 225.43 E-value: 1.25e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 11 LAALNEAFPG-VVLDHAwqTKDQLTVTVKVNYLPEVVEFLYYKQGG---WLSVLFGNDE--RKLNGHY----AVYYVLSM 80
Cdd:PRK13292 225 AGELEGAFGDdVRLDEG--ATDMLTYRCPPELVPEVLRHLKKRASSpfrRLEDLAAVDEscRRDREKFpdftVNYHLLSF 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 81 EKGTKcwVTVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWpdELYPLRKDSmDYR--QR 158
Cdd:PRK13292 303 DTPGH--VRIKTELRGRTPELPSATGVFPAANWYEREAFDMFGIRFAGHPNLRRILMPPDW--EGHPLRKEH-PFRatEM 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 159 PAPTTD-------AETYEFINELgDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAEtRMGYN 231
Cdd:PRK13292 378 PPYTRDdarrlqpLPAGDFFDRV-DEETLILNLGPQHPGTHGIIRFVLKLDGEEIVDMDSDIGYHHRGAEKIGE-RQHWN 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 232 EVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETS 311
Cdd:PRK13292 456 QFIPYTDRIDYLAGVQNNLAYVNSVETLCGIEVPDRAIYIRVMLSELFRIANHLVWLGTFAADVGAMTPVFYTFTDREKI 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 312 MKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVG 391
Cdd:PRK13292 536 FDIVEMITGGRMHPAWFRIGGVAEDLPEGWKEAVEAFLRWFPGRLKEYEDLLTGNPIFKARLKGVGVITRDEAVEWGISG 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 392 PMVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTY-IP---- 466
Cdd:PRK13292 616 PNLRACGLAWDLRKKMPYGGYDRFDFEVPTAEGGDCYARYLVRMEEMRQSLRIVRQAAAGMPGGRWISDDYRYvLPqkrd 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 467 ---------HRF-------------ALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLI 524
Cdd:PRK13292 696 tlkdiesliHHFvnvtrgpappkgeCYAAIEAPKGENGYFVVSDGLNIAYRMRIRTPSFPHIQALPLLSRGWLVADFLAI 775
|
570
....*....|...
gi 15832831 525 IGSLDPCYSCTDR 537
Cdd:PRK13292 776 IGSIDFVLADLDR 788
|
|
| PRK11742 |
PRK11742 |
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional |
33-537 |
6.89e-54 |
|
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional
Pssm-ID: 236965 [Multi-domain] Cd Length: 575 Bit Score: 192.06 E-value: 6.89e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 33 LTVTVKVNYLPEVVEFLYYKQGGW--LSVLFGNDERkLNGHYA---------VYYVLSMEKGTKcwVTVRVEVDANKPEY 101
Cdd:PRK11742 24 PVVWVKREQLLEVLRFLRKLPKPYvmLFDLHGIDER-LRTHREglpaadftvFYHLISIERNRD--IMLKVALSENDLHV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 102 PSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWpdELYPLRKDsmdyrqRPAPTTDAETYEFIN--------- 172
Cdd:PRK11742 101 PTITKIFPNANWYERETWDMFGITFDGHPHLRRILMPPTW--EGHPLRKD------YPARATEFDPFELTKakqdlemea 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 173 ------ELGDKKNN------VVPIGPLHVTSDepGHFR--LFVDGENIIDADYRLFYVHRGMEKLAEtRMGYNEVTFLSD 238
Cdd:PRK11742 173 lrfkpeEWGMKRGTdnedfmFLNLGPNHPSAH--GAFRivLQLDGEEIVDCVPDIGYHHRGAEKMGE-RQSWHSYIPYTD 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 239 RVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEIL 318
Cdd:PRK11742 250 RIDYLGGCMNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIGTFIQDVGAMTPVFFAFTDRQKIYDVIEAI 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 319 TGARKTYGLNLIGGIRRDLLK--DDMIqtRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRA 396
Cdd:PRK11742 330 TGFRMHPAWFRIGGVAHDLPRgwDRLL--REFLDWMPKRLDEYEKAALRNSILKGRTQGVAAYNAKEALEWGVTGAGLRA 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 397 SGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGP-------------------- 456
Cdd:PRK11742 408 TGIDFDVRKARPYSGYENFDFEVPVGGNGDCYDRVMVKVEEMRQSLRIIEQCLDNMPEGPfkadhplttpppkertlqhi 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 457 -------LMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLD 529
Cdd:PRK11742 488 etlithfLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSFAHLQQIPSVIRGSLVSDLIVYLGSID 567
|
....*...
gi 15832831 530 PCYSCTDR 537
Cdd:PRK11742 568 FVMSDVDR 575
|
|
| PRK12322 |
PRK12322 |
NADH-quinone oxidoreductase subunit D; |
184-530 |
8.83e-53 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 183437 [Multi-domain] Cd Length: 366 Bit Score: 184.14 E-value: 8.83e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 184 IGPLHVTSDepGHFRLFV--DGENIIDADYRLFYVHRGMEKLAETRMgYNEVTFLSDRVCGICGFAHSTAYTTSVENAMG 261
Cdd:PRK12322 11 VGPQHPSTH--GVFRLVLkiDGEIIVEATPVIGYLHRGTEKLAESLQ-YTQIIPYTDRMDYLSAMTNNYVYCHAVETMMG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 262 IQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDD 341
Cdd:PRK12322 88 LEVPERAEYLRVIAMELGRIASHLVWWGTYLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRIGGVKWDAPDGW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 342 MIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVHS 421
Cdd:PRK12322 168 IEKVKEFVPYMREQLAGYHDLVTGNEIFLNRVKGVGIYSAEEAISYSLSGVNLRCTGVNWDLRKDEPYSIYDRFDFDIPV 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 422 EQGCDVISRLKVRINEVYTALNMIDYGLDNLP-GGPLMVE---------GFTYipHRFalgfaEAPRGDDIHWSMTGDNQ 491
Cdd:PRK12322 248 GSVGDCWDRYVCRMQEIEQSLKIIEQAVEQFPkEGPVLAKvpkiikapkGEAY--VRI-----ESPRGEIGCYIASDGKK 320
|
330 340 350
....*....|....*....|....*....|....*....
gi 15832831 492 KLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDP 530
Cdd:PRK12322 321 KPYRLKFRRPSFYNLQILPKLLKGENIANLIAILGSIDI 359
|
|
| Complex1_49kDa |
pfam00346 |
Respiratory-chain NADH dehydrogenase, 49 Kd subunit; |
295-537 |
2.03e-46 |
|
Respiratory-chain NADH dehydrogenase, 49 Kd subunit;
Pssm-ID: 459772 Cd Length: 270 Bit Score: 164.10 E-value: 2.03e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 295 TGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTV 374
Cdd:pfam00346 1 LGAMTPFLYAFREREKILDLFERITGARMTHSYFRPGGVARDLPEGFLEKIREFLDYFPKRLDEYEDLLTRNRIFKDRTK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 375 GIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPG 454
Cdd:pfam00346 81 GVGVLSAEDALALGVTGPMLRASGVPWDLRKDEPYSGYDELDFDVPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 455 GPLMVEGFTYIP--------------HRFAL---GF----------AEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWP 507
Cdd:pfam00346 161 GPVMADDPKIALppkeemktsmealiHHFKLvteGFrvpagevyvaVEAPKGELGFYLVSDGGTKPYRVKIRAPSFANLQ 240
|
250 260 270
....*....|....*....|....*....|
gi 15832831 508 TLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:pfam00346 241 ALPEMCKGHMLADVVAIIGSIDIVMGEVDR 270
|
|
| PRK07415 |
PRK07415 |
NAD(P)H-quinone oxidoreductase subunit H; Validated |
181-537 |
7.37e-40 |
|
NAD(P)H-quinone oxidoreductase subunit H; Validated
Pssm-ID: 180969 [Multi-domain] Cd Length: 394 Bit Score: 149.50 E-value: 7.37e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 181 VVPIGPLHVTSDepGHFRLFV--DGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSdRVCGICGFAHSTAYTTSVEN 258
Cdd:PRK07415 12 VLNFGPHHPSMH--GVLRLIVtlDGEDVVDCEPVIGYLHRGMEKIAENRTNVMYVPYVS-RWDYAAGMFNEAITVNAPEK 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 259 AMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARkTYGLNL--IGGIRRD 336
Cdd:PRK07415 89 LANIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREMIYDLWEAATGQR-LINNNYfrIGGVAAD 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 337 LLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTR-ADHpFVGYGLL 415
Cdd:PRK07415 168 LPYGWLEKCLDFCDYFGPKIDEYEKLITNNPIFRRRIEGLGTISREEAINWGLSGPMLRASGVKWDLRkVDH-YECYDDF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 416 PMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPL-------MVEG---------FTYIPHRFALGF------ 473
Cdd:PRK07415 247 DWDVAWETEGDCLARYRVRIEEMRESVKIIRQACKGIPGGPYenleakrMAEGkksewngfdYQYVAKKVAPTFkipnge 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15832831 474 ----AEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:PRK07415 327 lyvrLESGKGELGIFIQGNNDVTPWRWKIRAADFNNLQILPHLLKGAKVADIMAILGSIDVIMGSVDR 394
|
|
| Complex1_30kDa |
pfam00329 |
Respiratory-chain NADH dehydrogenase, 30 Kd subunit; |
35-151 |
4.54e-33 |
|
Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
Pssm-ID: 459763 [Multi-domain] Cd Length: 121 Bit Score: 122.59 E-value: 4.54e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 35 VTVKVNYLPEVVEFLYYKQGG--WLSVLFGNDERKlNGHYAVYYVLSMekgTKCWVTVRVEV-DANKPEYPSVTPRVPAA 111
Cdd:pfam00329 1 VTVDPEDLLEVARFLRDDELGfdHLSDLTGVDYPE-EGRFEVVYHLLS---ITHNVRVRVKVpLEDDPVVPSVTDIWPGA 76
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 15832831 112 VWGEREVRDMYGLIPVGLPDERRLVLPDDWpdELYPLRKD 151
Cdd:pfam00329 77 NWYEREVYDMFGIVFEGHPDLRRILLPEDW--EGHPLRKD 114
|
|
| ndhH |
CHL00017 |
NADH dehydrogenase subunit 7 |
181-529 |
3.46e-32 |
|
NADH dehydrogenase subunit 7
Pssm-ID: 176960 Cd Length: 393 Bit Score: 127.89 E-value: 3.46e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 181 VVPIGPLHVTSDepGHFRLFV--DGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLS--DRVcgicgfahSTAYTTSV 256
Cdd:CHL00017 12 IVNMGPHHPSMH--GVLRLIVtlDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTrwDYL--------ATMFTEAI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 257 -----ENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIG 331
Cdd:CHL00017 82 tvnapEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 332 GIRRDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVG 411
Cdd:CHL00017 162 GVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIQWDLRKVDHYEC 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 412 YGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPL------------MVE--GFTY------------I 465
Cdd:CHL00017 242 YDEFDWEVQWQKEGDSLARYLVRIGEMTESIKIIQQALEGIPGGPYenlearrfdrekDSEwnDFEYrfiskkpsptfeL 321
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15832831 466 PHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLD 529
Cdd:CHL00017 322 SKQELYVRVEAPKGELGIFLIGDDSVFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSID 385
|
|
| NuoC |
COG0852 |
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; ... |
1-151 |
4.74e-29 |
|
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440613 [Multi-domain] Cd Length: 164 Bit Score: 113.00 E-value: 4.74e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 1 MSEEklgQHYLAALNEAFPGVVLDhAWQTKDQLTVTVKVNYLPEVVEFLYYKQG-GWLSVLFGNDERKLNGHYAVYYVL- 78
Cdd:COG0852 1 MSEL---EELLEALEEKFGDAVLE-VEEARGELTLTVPPEDLVDVARFLRDDLGfDHLSDLTGVDYPERGDRFEVVYHLl 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15832831 79 SMEKGTKcwVTVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWpdELYPLRKD 151
Cdd:COG0852 77 SLTHNRR--LRLKVFVPRDDPVVPSVTDVWPGANWHEREAYDMFGIVFEGHPDLRRILLPEDW--EGHPLRKD 145
|
|
| PRK06074 |
PRK06074 |
NADH dehydrogenase subunit C; Provisional |
1-151 |
1.75e-21 |
|
NADH dehydrogenase subunit C; Provisional
Pssm-ID: 235691 [Multi-domain] Cd Length: 189 Bit Score: 92.28 E-value: 1.75e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 1 MSEEKLGQHylaaLNEAFPGVVLDHAwQTKDQLTVTVKVNYLPEVVEFLyyKQGGW-----LSVLFGNDERKLNGHYA-V 74
Cdd:PRK06074 2 EKLEELVAK----LLEKLPDAIGKVT-VAFGELTLKVPAEKILEVLTFL--RDDPElrfeqLIDLTGVDYPERGKRFEvV 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15832831 75 YYVLSMEKGTKcwVTVRVEVDaNKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWpdELYPLRKD 151
Cdd:PRK06074 75 YHLLSYKHNVR--LRVKVRAP-EDPVVPSVVDIWPSANWYEREAYDLYGIVFEGHPDLRRILTDYGF--EGHPLRKD 146
|
|
| NuoC_fam |
TIGR01961 |
NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH ... |
33-151 |
3.31e-18 |
|
NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH dehydrogenase complex I in bacteria, as well as many instances of the corresponding mitochondrial subunit (NADH dehydrogenase subunit 9) and of the F420H2 dehydrogenase in Methanosarcina. Complex I contains subunits designated A-N. This C subunit often occurs as a fusion protein with the D subunit. This model excludes the NAD(P)H and plastoquinone-dependent form of chloroplasts and [Energy metabolism, Electron transport]
Pssm-ID: 273897 [Multi-domain] Cd Length: 121 Bit Score: 80.74 E-value: 3.31e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 33 LTVTVKVNYLPEVVEFLYYKQGGW--LSVLFGNDERKLNGHYAVYYVLSMEKGTKcwVTVRVEVDANKPeYPSVTPRVPA 110
Cdd:TIGR01961 1 LVVWIKKEQLLEVLTFLKDPALGFelLTDVSGVDYPKEKRFEVVYHLLSIKKNRR--IRLKVRLSEDDP-VPSLTSVFPT 77
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 15832831 111 AVWGEREVRDMYGLIPVGLPDERRLVLPDDWpdELYPLRKD 151
Cdd:TIGR01961 78 ANWYERETYDMYGIVFDGHPDLRRILMPDDF--EGHPLRKD 116
|
|
| PRK07735 |
PRK07735 |
NADH-quinone oxidoreductase subunit C; |
8-155 |
9.10e-16 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 236081 [Multi-domain] Cd Length: 430 Bit Score: 79.64 E-value: 9.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 8 QHYLAALNEAFPGVVLDHAW---QTKDQLTVTVKVNYLPEVVEFLYYKQG---GWLSVLFGNDerkLNGHYAVYYVLsME 81
Cdd:PRK07735 279 NKYVEVIKEKLGEDVLEDSYinkLSKDVPTLVVEPEKYYEVAELLRFHEQlafDYLSELHGTD---FVTHMEVYVHL-YS 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15832831 82 KGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDelYPLRKDSMDY 155
Cdd:PRK07735 355 YGKRQSVAVKVKLDREAPQVESVTPLWKGANWPEREAYDLLGIVFKGHPNLSRILLPDDWVG--HPLRKDYEPY 426
|
|
| FrhA |
COG3259 |
Coenzyme F420-reducing hydrogenase, alpha subunit [Energy production and conversion]; |
195-375 |
5.67e-14 |
|
Coenzyme F420-reducing hydrogenase, alpha subunit [Energy production and conversion];
Pssm-ID: 442490 Cd Length: 458 Bit Score: 74.42 E-value: 5.67e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 195 GHFRLFV---DGENIIDAdyrlfYVH----RGMEKLAETRMgYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPER 267
Cdd:COG3259 15 GHGKITIfldDDGKVKDA-----RLHivepRGFEKFLEGRP-YEEVPDITARICGICPVAHHLASAKALEAAFGVEPPPT 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 268 AQMIRAILLEVERLHSHLLNLGL--ACHFTGFDSGF----------MQFFRVRETSMKMAEILTGaRKTYGLNLI-GGIR 334
Cdd:COG3259 89 ARKLRRLLYCGEWIQSHALHFFFlaAPDFLGYRNVLglakkhpelvKRGLRLRKLGNEIIELLGG-RAIHPVNAVpGGFS 167
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 15832831 335 RDLLKDDMIQTRQLAQQMRREVQELVDVL--LSTPNMEQRTVG 375
Cdd:COG3259 168 KAPSEEERDELLERLEEALEFAEEAVDLFkdLFLKNKDEVDFP 210
|
|
| PRK07785 |
PRK07785 |
NADH dehydrogenase subunit C; Provisional |
11-151 |
1.00e-11 |
|
NADH dehydrogenase subunit C; Provisional
Pssm-ID: 181115 [Multi-domain] Cd Length: 235 Bit Score: 65.01 E-value: 1.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 11 LAALNEAFPGVVLDHawqtkDQLTVTVKVNYLPEVVEFLYYKQG-------GWLSVLFGNDE-RKLnghYAVYYVLSMEK 82
Cdd:PRK07785 74 LPEFADAIERVVVDR-----GELTLHVRREHLVEVAQTLRDDPAlrfelclGVSGVHYPHDTgREL---HAVYHLTSITH 145
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15832831 83 GTKcwvtVRVEV---DANkPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDelYPLRKD 151
Cdd:PRK07785 146 NRR----IRLEVavpDAD-PHIPSLVSVYPTNDWHERETYDFFGIVFDGHPALTRIEMPDDWVG--HPQRKD 210
|
|
| HyaB |
COG0374 |
Ni,Fe-hydrogenase I large subunit [Energy production and conversion]; |
239-294 |
2.70e-11 |
|
Ni,Fe-hydrogenase I large subunit [Energy production and conversion];
Pssm-ID: 440143 Cd Length: 539 Bit Score: 66.01 E-value: 2.70e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 15832831 239 RVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLnlglacHF 294
Cdd:COG0374 55 RICGVCTTSHALASVRALEDALGIEPPPNARLIRNLILAAENLHDHLV------HF 104
|
|
| PRK08491 |
PRK08491 |
NADH-quinone oxidoreductase subunit C; |
70-150 |
1.21e-10 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 181449 Cd Length: 263 Bit Score: 62.38 E-value: 1.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 70 GHYAVYY-VLSMEKGTKCWVTVRVEVdanKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDelYPL 148
Cdd:PRK08491 96 GGFEVFYqLLSMSKRKRVRVKCFLKE---KEALQSVSFLFKSANWSEREMYDMFGIVINNHPYLKRILMPDDWVG--HPL 170
|
..
gi 15832831 149 RK 150
Cdd:PRK08491 171 LK 172
|
|
| PRK12494 |
PRK12494 |
NAD(P)H-quinone oxidoreductase subunit J; |
35-151 |
1.75e-10 |
|
NAD(P)H-quinone oxidoreductase subunit J;
Pssm-ID: 183557 [Multi-domain] Cd Length: 172 Bit Score: 59.97 E-value: 1.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 35 VTVKVNYLPEVVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEV--DANKPEYPSVTPRVPAAV 112
Cdd:PRK12494 43 IKVEPDFLLPIATALYAYGFNYLQCQGGYDEGPGKELVSFYHLIKVSDNADKPREVRLKVflPRDDPRVPSVYWIWKGAD 122
|
90 100 110
....*....|....*....|....*....|....*....
gi 15832831 113 WGEREVRDMYGLIPVGLPDERRLVLPDDWPDelYPLRKD 151
Cdd:PRK12494 123 WQERETYDMYGINFEGHPNLKRILMPEDWVG--WPLRKD 159
|
|
| NiFeSe_Hases |
pfam00374 |
Nickel-dependent hydrogenase; |
239-294 |
4.83e-10 |
|
Nickel-dependent hydrogenase;
Pssm-ID: 459789 Cd Length: 495 Bit Score: 62.12 E-value: 4.83e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 15832831 239 RVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLnlglacHF 294
Cdd:pfam00374 21 RICGVCTTVHALASVRAVEDALGIKIPLNAQLIRNLIQGALFVHDHIV------HF 70
|
|
| PRK10170 |
PRK10170 |
Ni/Fe-hydrogenase large subunit; |
195-288 |
1.53e-09 |
|
Ni/Fe-hydrogenase large subunit;
Pssm-ID: 182281 Cd Length: 597 Bit Score: 60.81 E-value: 1.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832831 195 GHFR--LFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLsDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIR 272
Cdd:PRK10170 29 GHMRceVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDAWAFV-ERICGVCTGVHALASVYAIEDAIGIKVPDNANIIR 107
|
90
....*....|....*.
gi 15832831 273 AILLEVERLHSHLLNL 288
Cdd:PRK10170 108 NIMLATLWCHDHLVHF 123
|
|
| PRK10467 |
PRK10467 |
hydrogenase 2 large subunit; Provisional |
218-286 |
6.30e-07 |
|
hydrogenase 2 large subunit; Provisional
Pssm-ID: 182482 Cd Length: 567 Bit Score: 52.09 E-value: 6.30e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15832831 218 RGMEKLAETRmGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLL 286
Cdd:PRK10467 39 RGMEEIVKNR-DPRDAWMIVQRICGVCTTTHAISSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIV 106
|
|
| ndhJ |
CHL00012 |
NADH dehydrogenase subunit J |
91-151 |
2.01e-05 |
|
NADH dehydrogenase subunit J
Pssm-ID: 176955 [Multi-domain] Cd Length: 158 Bit Score: 45.07 E-value: 2.01e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15832831 91 RVEVDANKPE-------YPSVTPRVPAAVW-------GEREVRDMYGLIPVGLPDERRLVLPDDWPDelYPLRKD 151
Cdd:CHL00012 73 RIQYGVDQPEevcikvfVPRKNPRIPSVFWvwksadfQERESYDMLGISYDNHPRLKRILMPESWIG--WPLRKD 145
|
|
| |
