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Conserved domains on  [gi|40254129|ref|NP_258435|]
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splicing regulator ARVCF isoform 1 [Mus musculus]

Protein Classification

armadillo/beta-catenin-like repeat-containing protein( domain architecture ID 12192474)

armadillo/beta-catenin-like repeat-containing protein similar to catenin delta, plakophilin and armadillo repeat-containing protein

CATH:  1.25.10.10
Gene Ontology:  GO:0098609|GO:0005515
PubMed:  12946625|9770300|9298899|20688255
SCOP:  3000116

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 434-475 5.11e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.74  E-value: 5.11e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 40254129    434 DTDNKAAIRDCGGVPALVRLLRaARDNEVRELVTGTLWNLSS 475
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLK-SEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 391-431 2.24e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.81  E-value: 2.24e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 40254129    391 NEGIKRRVRQLRGLPLLVALLDHPRAEVRRRACGALRNLSY 431
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 703-738 7.87e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 46.27  E-value: 7.87e-07
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 40254129    703 RATVRKERGLPVLVELLQSETDKVVRAVAIALRNLS 738
Cdd:smart00185   5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 657-693 5.99e-03

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


:

Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 35.51  E-value: 5.99e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 40254129   657 ELLYQPEVVRLYLSLLTeSRNFNTLEAAAGALQNLSA 693
Cdd:pfam00514   6 QAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
 
Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 434-475 5.11e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.74  E-value: 5.11e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 40254129    434 DTDNKAAIRDCGGVPALVRLLRaARDNEVRELVTGTLWNLSS 475
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLK-SEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 434-475 7.88e-08

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 49.38  E-value: 7.88e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 40254129   434 DTDNKAAIRDCGGVPALVRLLRAArDNEVRELVTGTLWNLSS 475
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSP-DEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 391-431 2.24e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.81  E-value: 2.24e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 40254129    391 NEGIKRRVRQLRGLPLLVALLDHPRAEVRRRACGALRNLSY 431
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 391-430 2.90e-07

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 47.45  E-value: 2.90e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 40254129   391 NEGIKRRVRQLRGLPLLVALLDHPRAEVRRRACGALRNLS 430
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 703-738 7.87e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 46.27  E-value: 7.87e-07
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 40254129    703 RATVRKERGLPVLVELLQSETDKVVRAVAIALRNLS 738
Cdd:smart00185   5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 362-475 2.22e-05

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 48.56  E-value: 2.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254129   362 LPEVLAMLRHPVDPVKANAAAYLQHLCFENEgikRRVRQLRG--LPLLVALLDHPRAEVRRRACGALRNLSYGRDTDN-- 437
Cdd:PLN03200   60 MPLLVSLLRSGTLGAKVNAAAVLGVLCKEED---LRVKVLLGgcIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDHvg 136

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 40254129   438 -KAAIRDcGGVPALVRLLRA--ARDNEVRELVTGTLWNLSS 475
Cdd:PLN03200  137 sKIFSTE-GVVPSLWDQLQPgnKQDKVVEGLLTGALRNLCG 176
HEAT COG1413
HEAT repeat [General function prediction only];
356-473 5.04e-05

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 44.23  E-value: 5.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254129 356 RWRDPE-LPEVLAMLRHPVDPVKANAAAYLqhlcfenegikRRVRQLRGLPLLVALLDHPRAEVRRRACGALRNLsygrd 434
Cdd:COG1413  42 RLGDPRaVPALLEALKDPDPEVRAAAAEAL-----------GRIGDPEAVPALIAALKDEDPEVRRAAAEALGRL----- 105

                        90       100       110
                ....*....|....*....|....*....|....*....
gi 40254129 435 tDNKAAirdcggVPALVRLLRAArDNEVRELVTGTLWNL 473
Cdd:COG1413 106 -GDPAA------VPALLEALKDP-DWEVRRAAARALGRL 136
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 703-738 1.63e-04

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 39.75  E-value: 1.63e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 40254129   703 RATVRKERGLPVLVELLQSETDKVVRAVAIALRNLS 738
Cdd:pfam00514   5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 657-693 5.99e-03

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 35.51  E-value: 5.99e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 40254129   657 ELLYQPEVVRLYLSLLTeSRNFNTLEAAAGALQNLSA 693
Cdd:pfam00514   6 QAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
 
Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 434-475 5.11e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.74  E-value: 5.11e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 40254129    434 DTDNKAAIRDCGGVPALVRLLRaARDNEVRELVTGTLWNLSS 475
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLK-SEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 434-475 7.88e-08

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 49.38  E-value: 7.88e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 40254129   434 DTDNKAAIRDCGGVPALVRLLRAArDNEVRELVTGTLWNLSS 475
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSP-DEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 391-431 2.24e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.81  E-value: 2.24e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 40254129    391 NEGIKRRVRQLRGLPLLVALLDHPRAEVRRRACGALRNLSY 431
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 391-430 2.90e-07

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 47.45  E-value: 2.90e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 40254129   391 NEGIKRRVRQLRGLPLLVALLDHPRAEVRRRACGALRNLS 430
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 703-738 7.87e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 46.27  E-value: 7.87e-07
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 40254129    703 RATVRKERGLPVLVELLQSETDKVVRAVAIALRNLS 738
Cdd:smart00185   5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 362-475 2.22e-05

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 48.56  E-value: 2.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254129   362 LPEVLAMLRHPVDPVKANAAAYLQHLCFENEgikRRVRQLRG--LPLLVALLDHPRAEVRRRACGALRNLSYGRDTDN-- 437
Cdd:PLN03200   60 MPLLVSLLRSGTLGAKVNAAAVLGVLCKEED---LRVKVLLGgcIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDHvg 136

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 40254129   438 -KAAIRDcGGVPALVRLLRA--ARDNEVRELVTGTLWNLSS 475
Cdd:PLN03200  137 sKIFSTE-GVVPSLWDQLQPgnKQDKVVEGLLTGALRNLCG 176
HEAT COG1413
HEAT repeat [General function prediction only];
356-473 5.04e-05

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 44.23  E-value: 5.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254129 356 RWRDPE-LPEVLAMLRHPVDPVKANAAAYLqhlcfenegikRRVRQLRGLPLLVALLDHPRAEVRRRACGALRNLsygrd 434
Cdd:COG1413  42 RLGDPRaVPALLEALKDPDPEVRAAAAEAL-----------GRIGDPEAVPALIAALKDEDPEVRRAAAEALGRL----- 105

                        90       100       110
                ....*....|....*....|....*....|....*....
gi 40254129 435 tDNKAAirdcggVPALVRLLRAArDNEVRELVTGTLWNL 473
Cdd:COG1413 106 -GDPAA------VPALLEALKDP-DWEVRRAAARALGRL 136
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 703-738 1.63e-04

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 39.75  E-value: 1.63e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 40254129   703 RATVRKERGLPVLVELLQSETDKVVRAVAIALRNLS 738
Cdd:pfam00514   5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
HEAT_2 pfam13646
HEAT repeats; This family includes multiple HEAT repeats.
 362-464 2.82e-03

HEAT repeats; This family includes multiple HEAT repeats.


Pssm-ID: 433376 [Multi-domain]  Cd Length: 88  Bit Score: 37.70  E-value: 2.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254129   362 LPEVLAMLRHPVDP-VKANAAAYLQHLCFEnegikrrvrqlRGLPLLVALLDHPRAEVRRRACGALrnlsygrdtdnkAA 440
Cdd:pfam13646   1 LPALLQALLRDPDPeVRAAAIRALGRIGDP-----------EAVPALLELLKDEDPAVRRAAAEAL------------GK 57

                          90       100
                  ....*....|....*....|....
gi 40254129   441 IRDCGGVPALVRLLRAARDNEVRE 464
Cdd:pfam13646  58 IGDPEALPALLELLRDDDDDVVRA 81
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 657-693 5.99e-03

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 35.51  E-value: 5.99e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 40254129   657 ELLYQPEVVRLYLSLLTeSRNFNTLEAAAGALQNLSA 693
Cdd:pfam00514   6 QAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
HEAT_EZ pfam13513
HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats ...
 375-429 7.42e-03

HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). These EZ repeats are found in subunits of cyanobacterial phycocyanin lyase and other proteins and probably carry out a scaffolding role.


Pssm-ID: 463906 [Multi-domain]  Cd Length: 55  Bit Score: 35.81  E-value: 7.42e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 40254129   375 PVKANAAAYLQHLCFEN-EGIKRRVRQLrgLPLLVALLDHPRAEVRRRACGALRNL 429
Cdd:pfam13513   2 RVREAAALALGSLAEGGpDLLAPAVPEL--LPALLPLLNDDSDLVREAAAWALGRL 55
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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