|
Name |
Accession |
Description |
Interval |
E-value |
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
1-615 |
0e+00 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 934.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 1 MNRVFLTPAA---VALCGASSLSLAEPvsLADQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLA 77
Cdd:TIGR01779 1 MQKSALAPALaslLTLCSALHANEAQP--LDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 78 NNGGFGKNTTLFLRGTESDHVLVLIDGIKVGSASAGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRGDG 157
Cdd:TIGR01779 79 QNGGRGQNTSLFLRGTESDHVLVLIDGIRFGSAAAGAADFQQLPVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 158 qGAKPFFSAGYGTHQTLEGSAGVSGGA-GNGWYSLGVSSFDTAGINTKRAGTAGYEPDRDGYRNLSGNLRGGYRFDNGLE 236
Cdd:TIGR01779 159 -GQGTTLSAGLGSLDYQEYSIASGVAIgENGWYSVALGTESTKGINVRPGGPGVYDPDRDGFRSDSLLLGGGHRFDESWS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 237 LDGTLLRAKSHNDYD-QVFGNSGFNANADGEQNLVGGRARFTPFDPWLVTLQAGRSEDKADAYQDGRFYSRFDTR-RDSL 314
Cdd:TIGR01779 238 LFVNALRYENRNDYDnYSFGTRLYKEAEKGDQSFTGGRQRQSERDVSELTLSTGKSKDWDYAYSKGRYSSTSDTReQRNI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 315 SWQNDLTLAEGHVLTLGYDWQKDEISSSEAFSVDSRLNKGWFAQYLGQYGRQDWQLSLRRDDNQQFGVHDTGSAAWGYAL 394
Cdd:TIGR01779 318 QWQNDLLVGDGWVLAGGVDWQKDSIISSTADKEDDRSNTAAFAQVLQQWGQQLLEASLRRDDNQQFGSHTTGSIAWGYQF 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 395 SDALRFTVSYGTAFKAPTFNELYYPDYGNPDLDAETSRSLEVGLSGTHGWGHWAVNAFRTNVDDLIGNDPrpapgRPWGQ 474
Cdd:TIGR01779 398 IEELRFTASYGTAFKAPNLNQLYYPSYGNPNLQPETSKSAELGFYGLFSGGKWSISGYRTKINDLIDYDS-----HPKGY 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 475 PNNIDEARIRGVELVLGSQWLGWDWNANATFLDPQNrsggVNDGNELPRRARRMFNLELDRRFERLSLGASVHAEGRRYD 554
Cdd:TIGR01779 473 PNNIGEARIKGVEATAEFATGGWTHQLSVDLLDAQN----VNTGNTLPRRARQMYKWNADRAFEQFDWGASYQYVGKRYD 548
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15596468 555 DPANK-----VRLGGYATLDLRSEYRLNDEWRLQGRIANLFGADHETAYGYNQPGQAVYLSVRYQA 615
Cdd:TIGR01779 549 DDYNTyptqnVRLGGYSLLDLRVSYYVTDSWTVQGRIANLFDKDYETAYGYPQAGRAYYLSIRYQF 614
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
29-613 |
4.33e-108 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 338.12 E-value: 4.33e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 29 DQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGKNTTLFLRGTESDHVLVLIDGIKVg 108
Cdd:PRK10641 27 TLVVTANRFQQPVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGQLSSLFIRGTNSSHVLVLIDGVRL- 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 109 sASAGLTAFQDL---PVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRgDGQGAKpfFSAGYGTH--QTLEGSAGVSGG 183
Cdd:PRK10641 106 -NQAGISGSADLsqiPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTR-DKPGTT--LSAGWGSNgyQNYDGSTQQQLG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 184 AgNGWYSLGVSSFDTAGINTKRAGTAGY--EPDRDGYRN--------------LSGNLRGgYRFDNGLELDGTLLRAKSH 247
Cdd:PRK10641 182 D-NTRVTLAGDYTYTKGFDVVAYGNTGTqaQPDRDGFMSktlwgglehqfndqWSGFVRG-YGYDNRTDYDAYYSPGSPL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 248 NDYDQVFGNS---GFNANADGEQN-LVGG--RARFTPFDPwlvtlQAGRsedkadaYQDGrfYSRFDTRRDSLSWQNDLT 321
Cdd:PRK10641 260 IDTRQLYSQSwdaGLRYNGGIYSSqLIASysHSKDYNYDP-----HYGR-------YDSS--ATLDDMKQYNVQWGNTVQ 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 322 LAEGHVLTlGYDWQKDEISSSEAFSVD--SRLNKGWFAQYLGQYGRQDWQLSLRRDDNQQFGVHDTGSAAWGYALSDALR 399
Cdd:PRK10641 326 VGHGNISA-GVDWQKQTTTPGTGYVPDgyDQRNTGIYLTGQQQIGDVTLEGAARSDDNSQFGWHGTWQTSAGWEFIDGYR 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 400 FTVSYGTAFKAPTFNELYyPDYGNPDLDAETSRSLEVGLSGTHGWGHWAVNAFRTNVDDLIGNDPRPapgrpwGQPNNID 479
Cdd:PRK10641 405 FIASYGTAFKAPNLGQLY-GFYGNPNLKPEESKQWEGGFEGLTGPVNWRLSGYRNDIDNLIDYDDHT------LKYYNVG 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 480 EARIRGVElvlgsqwlgwdWNANAT-----------FLDPQNrsggvNDGNE-LPRRARRMFNLELDRRFERLSLGASVH 547
Cdd:PRK10641 478 KATIKGVE-----------WTGNFDtgplthqvtldYVDPRN-----AITDEpLARRAKQQVKYQLDWQLYDFDWGVTYQ 541
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15596468 548 AEGRRYD-----DPANKVRLGGYATLDLRSEYRLNDEWRLQGRIANLFGADHETAYGYNQPGQAVYLSVRY 613
Cdd:PRK10641 542 YLGTRYDkdystYPYQTVKLGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYETVYGYQTAGREYTLSGSY 612
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
5-583 |
2.26e-98 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 312.95 E-value: 2.26e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 5 FLTPAAVALCGASSLSlAEPVSLADQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGK 84
Cdd:COG4771 6 LLLLLALAAQAADALA-EDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRGG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 85 NTTLFLRGTESDHVLVLIDGIKV-GSASAGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRG-DGQGAKP 162
Cdd:COG4771 85 SSGISIRGLGGDRVLVLIDGVPVnNPALGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPtDELEGSV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 163 FFSAGYGTHQTLEGSAGVSGGAGNGWYSLGVSSFDTAGINTKRagtAGYEPDRDGYRNLSGNLRGGYRFDNGLELDGTLL 242
Cdd:COG4771 165 SLGYGSNGNGTYSGSLSLGGPGDKLSFLLSGSYRDRDGYLDYR---NGGFVGNSGYERYNLNAKLGYRLSDNHRLSLSGG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 243 RAKSHNDYDQ-------VFGNSGFNANADGEQNLVGGRARFTPFDPWLVTLQAGRSEDKADAYQDGRFYSRFDTRRD--- 312
Cdd:COG4771 242 YSRQDRDGGPptlgdteISSDNAGDRDTTTDRGNYSLRYNGDLGDNLDLSLYYSRTDRDSTNGSLGGSTGSFSDSDDtty 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 313 SLSWQNDLTLAEGHVLTLGYDWQKDEISSSEAFSVD--SRLNKGWFAQYLGQYGRQ-DWQLSLRRDDNQQFGVHD----T 385
Cdd:COG4771 322 GLELDLTYPLGGNHTLTLGAEYRYDDLDSSSFLGGAdaSRDTYGLFAQDEWKLTDKlTLTAGLRYDYYSTFGASNytafS 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 386 GSAAWGYALSDALRFTVSYGTAFKAPTFNELYYPD--------YGNPDLDAETSRSLEVGLSGTHGWGHW--AVNAFRTN 455
Cdd:COG4771 402 PRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGtgtpgryvLGNPDLKPETSDNYELGLEYRLGNGGLslSLTGFYTD 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 456 VDDLIGNDPRPAPGRPWGQPNNIDEARIRGVELVLGSQWL-GWDWNANATFLDPQNRSGgvNDGNELPRRARRMFNLELD 534
Cdd:COG4771 482 IKDLIVLVPVGPGPGDVLQYENVGKARTYGLELELKYRLGkGLTLTASYTYLDSKIDDG--DTGEPLPNVPPHKANLGLD 559
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 15596468 535 RRF-ERLSLGASVHAEGRRYDDP---ANKVRLGGYATLDLRSEYRLNDEWRLQ 583
Cdd:COG4771 560 YRLpKWWLLLLLTRYYGGRYVTPpsgRLEGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
31-609 |
5.02e-86 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 281.33 E-value: 5.02e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 31 VVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFgkNTTLFLRGTESDH--VLVLIDGIKVG 108
Cdd:COG1629 5 VVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGG--AGQISIRGFGGGGnrVLVLVDGVPLN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 109 SASAGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRG-DGQGAKpfFSAGYGTHQTLEGSAGVSGGAGNG 187
Cdd:COG1629 83 DPSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPkDGKGGE--VSASYGSYGTYRASLSLSGGNGKL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 188 WYSLGVSSFDTAGIntkragtagyePDRDGYRNLSGNLRGGYRFDNGLELDGTLLRAKSHNDYDQVF------------- 254
Cdd:COG1629 161 AYRLSASYRDSDGY-----------RDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLtlaalrprgamdd 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 255 -GNSGFNANADGEQNLVGGRARFTPFDPWL-VTLQAGRSEDKADAYQD-------GRFYSRFDTRRDSLSWQNDLT---- 321
Cdd:COG1629 230 gTNPYSNDTDDNTRDRYSLSLEYEHLGDGLkLSASAYYRYDDTDLDSDftptpadGGTLEQTDFDNRTYGLELRLTydlg 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 322 LAEGHVLTLGYDWQKDEISSSEAFSVDSRLNKGWFAQY---------LGQYGRQDWQLS--------LRRDDNQQFGVHD 384
Cdd:COG1629 310 FGGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGadddgtttsLALYAQDTYKLTdkltltagLRYDYVSYDVDDT 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 385 ----------------TGSAAWGYALSDALRFTVSYGTAFKAPTFNELYYPD-----YGNPDLDAETSRSLEVGLSGTHG 443
Cdd:COG1629 390 vtgtdsasgsrsysafSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGtdpysVGNPDLKPETSTNYELGLRYRLL 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 444 WGHWAVNA--FRTNVDDLIGNDPRPAPGRPWGQPNNIDEARIRGVELVLGSQWL-GWDWNANATFLDPQNRSGGVN---- 516
Cdd:COG1629 470 DGRLSLSLalFYSDVDNEILSVPLPNDSGFSTYYTNAGKARSYGVELELSYQLTpGLSLNASYSYTDAKFDDDTDGsadl 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 517 DGNELPRRARRMFNLELDRRF-ERLSLGASVHAEGRRYDDPANKVRL-GGYATLDLRSEYRLNDEWRLQGRIANLFGADH 594
Cdd:COG1629 550 DGNRLPGVPPLTANLGLTYEFpGGWSLGLGVRYVGDRYLDDANTQGApGGYTLVDLGAGYRFGDNLTLSLGVDNLFDKKY 629
|
650
....*....|....*
gi 15596468 595 ETAYGYNQPGQAVYL 609
Cdd:COG1629 630 ATSLSVRASNVRGFL 644
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
48-614 |
1.12e-77 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 258.92 E-value: 1.12e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 48 VSVIDREDIERSQARSVPELLRQVPGVSLANNGGfGKNTTLFLRGTESDHVLVLIDGIKVGSASAGLTA-FQDLPVELIE 126
Cdd:cd01347 2 VSVITAEDIEKQPATSLADLLRRIPGVSVTRGGG-GGGSTISIRGFGPDRTLVLVDGLPLASSNYGRGVdLNTIPPELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 127 RIEVVRGPRSSLYGSEAIGGVIQIFTRRGDGQGAKpFFSAGYGThqtlegSAGVSGGAGNGWYSLGVSSFDTAGI----- 201
Cdd:cd01347 81 RVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGG-SVTAGYGS------DNSGSSGGGGFDVSGALADDGAFGArlyga 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 202 --NTKRAGTAGYEPDRDGYRNLSGNLRGGYRFDNGLELDGTLLRAKSHNDYD---------------------------- 251
Cdd:cd01347 154 yrDGDGTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPggtlpangtgsslgggpssntngdrdwd 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 252 ----------QVFGNSGFNANADGEQNLVGGRARFTPFDPWLVtlqaGRSEDKADAYQDGRFYSRFDTRRDSLSWQNDLT 321
Cdd:cd01347 234 yrdryrkrasLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILN----GGNNAAGGDLGRSGYSSERDTTQLGFDAGLNAP 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 322 LAEG---HVLTLGYDWQKDEISSSeafsvdsrlNKGWFAQYLGQYGRQ-DWQLSLRRDD--------------NQQFGVH 383
Cdd:cd01347 310 FGTGpvaHTLTLGVEYRREELDEK---------QTALYAQDTIELTDDlTLTLGLRYDHydqdskdtiaggttAKKSYSH 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 384 DTGSAAWGYALSDALRFTVSYGTAFKAPTFNELYYP-------DYGNPDLDAETSRSLEVGLSGTHG-WGHWAVNAFRTN 455
Cdd:cd01347 381 WSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGgshggtaAVGNPNLKPEKSKQYELGLKYDPGdGLTLSAALFRID 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 456 VDDLIGNDPRPAPGRPWGQPNNIDEARIRGVELVLGSQWL-GWDWNANATFLDP-QNRSGGVNDGNELPRRARRMFNLEL 533
Cdd:cd01347 461 IKNEIVSTPTNTGLGLVTVYVNGGKARIRGVELEASYDLTdGLGLTGSYTYTDTeVKRTDGATTGNRLPGIPKHTANLGL 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 534 D--RRFERLSLGASVHAEGRRYDDPA---NKVRLGGYATLDLRSEYRLNDEWRLQGRIANLFGADHET--------AYGY 600
Cdd:cd01347 541 DyeLPDEGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTslsvrgsgLYGY 620
|
650
....*....|....
gi 15596468 601 NQPGQAVYLSVRYQ 614
Cdd:cd01347 621 YGPGRTYYLSVSYK 634
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
31-316 |
3.82e-69 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 225.52 E-value: 3.82e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 31 VVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGKNTTLFLRGTESDHVLVLIDGIKVGSA 110
Cdd:COG4206 2 VVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAASISIRGLGSNQTLVLIDGVPLNDP 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 111 SAGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRGDGqGAKPFFSAGYGTHQTLEGSAGVSGGAGNGWYS 190
Cdd:COG4206 82 SLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKK-GFKGSVSASYGSFGTRRLSASLSGGAGKFSYS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 191 LGVSSFDTAGINTkragTAGYEPDRDGYRNLSGNLRGGYRFDNGLELDGTLLRAKSHNDYDqvfgnsgfNANADGEQNLV 270
Cdd:COG4206 161 LSASYRRSDGYRY----NDPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYP--------GAVGSDRNLRL 228
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 15596468 271 GGRARFTPFDPWLVTLQAGRSEDKA--DAYQDGRFYSRFDTRRDSLSW 316
Cdd:COG4206 229 SLSLEYKLSDGWSLLLLAYYYYDRDyeDGGGDSAGTSNTDGARAGLSY 276
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
10-614 |
3.89e-62 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 217.87 E-value: 3.89e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 10 AVALCGASSLSLAEPVSLADQVVTATRTAQTASQSLA-AVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGKNTTL 88
Cdd:COG4772 6 AAALLLAAAAAAEAATTLETVVVTGSRAAEARLKDVPgSVSVVDREELENQAATSLREVLRRVPGVNVQEEDGFGLRPNI 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 89 FLRGTESDH---VLVLIDGIKVGSASAGLTAFQ-DLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRGDgQGAKPFF 164
Cdd:COG4772 86 GIRGLGPRRsrgITLLEDGIPIAPAPYGDPAAYyFPDLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIP-TAFGGEL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 165 SAGYGThqtlegsagvsggagNGWYSLGVSSFDTAG-------INTKRAgtagyepdrDGYRNLSG------NLRGGYRF 231
Cdd:COG4772 165 RVTGGS---------------FGYRRTHASVGGTVGnfgylveYSRKRG---------DGFRDNSGfdindfNAKLGYRL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 232 DNGLELDGTLlrakSHNDYDQvfGNSG------FNANA----------DGEQNLVGGRARFTPFDPWLVTLQAGRSE--- 292
Cdd:COG4772 221 SDRQELTLKF----QYYDEDA--NTPGgltdaqFDADPrqsyrpadqfDTRRTQLSLRYEHQLSDNTTLTTTAYYNDfsr 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 293 ------DKADAYQDGRFYSRFDTRRDS----LSWQNDLTLAEG-HVLTLGYDWQKDEISSSEAFSVDSRLNKGWF----- 356
Cdd:COG4772 295 nwyirqNTADPNTPGLGLRGNPRGYRSygiePRLTHRFELGGVpHTLEVGLRYHREEEDRKQYVNTYGQGRSGAGlrrdr 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 357 ---AQYLGQYGRQDWQLS--------LR----RDDNQQFGVHDTGSAAWG--------------YALSDALRFTVSYGTA 407
Cdd:COG4772 375 rfsADALAAYAQNRFELTgrltltpgLRyehiRRDRTDRYSTRTGGDDSGsnsyseflpglgllYQLTDNLQLYANVSRG 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 408 FKAPTFNELYYPDYGNPDLDAETSRSLEVGLSGTHG-WGHWAVNAFRTNVDDLIGNDpRPAPGRPWGQPnNIDEARIRGV 486
Cdd:COG4772 455 FEPPTFGDLAYGNGGNPDLKPEKSWNYELGTRGRIGnGLSAEVALFYIDYDNELGSC-SAAGGDRSTFT-NAGETRHQGL 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 487 ELVLGSQWL-----GWDWNANATFLDP--QNRSGGVNDGNELPRRARRMFNLELDRRFERLSLGASVHAEGRRYDDPANK 559
Cdd:COG4772 533 ELALDYDLLkggglGLPLFAAYTYTDAefTSDFGPVFAGNRLPYVPRHQLTAGLGYEHGGWTANLNGRYVSEQFTDAANT 612
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15596468 560 VRLG------GYATLDLRSEYRLNDEWRLQGRIANLFG----ADHETAYGYN-QPGQ--AVYLSVRYQ 614
Cdd:COG4772 613 VADGsfgkipSYTVLDLSASYDFGKNLSLFAGVNNLFDkryiASRAPNYAAGiRPGPprTVYAGLRLK 680
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
11-614 |
6.93e-57 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 203.19 E-value: 6.93e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 11 VALCgASSLSLAEPVSLADQ-----VVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGKn 85
Cdd:PRK10064 10 VGLC-ASAISCAWPVLAVDDdgetmVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRK- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 86 tTLFLRGTESDHVLVLIDGIKVGSASAgltAFQ----DL---PVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRgDGQ 158
Cdd:PRK10064 88 -GVSIRGLDSSYTLILIDGKRVNSRNA---VFRhndfDLnwiPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKK-IGQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 159 GAKPFFSAgygtHQTLEGSAGVSGGAGNGWY--------SLGVSSFDTAGINTK-----RAGTAGYEPDR-DGYRNLSGN 224
Cdd:PRK10064 163 KWHGTVTV----DTTIQEHRDRGDTYNGQFFtsgplidgVLGMKAYGSLAKREKddpqnSTTTDTGETPRiEGFTSRDGN 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 225 LR------------GGYRFD-----------NGLELDGTLLRAKSHNDY---------DQVFGNSGFNANA-DGEQNLVG 271
Cdd:PRK10064 239 VEfawtpnqnhdftAGYGFDrqdrdsdsldkNRLERQNYSLSHNGRWDYgnselkyygEKVENKNPGNSSPiTSESNSID 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 272 GRARFtPFDPWLVTLQAGrSEDKADAYQD-----GRFYSRFDTRRDSLSWQNDLTLAEGHVLTLGydwqkdeissseafs 346
Cdd:PRK10064 319 GKYTL-PLTAINQFLTFG-GEWRHDKLSDavnltGGTSSKTSASQYALFVEDEWRIFEPLALTTG--------------- 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 347 vdsrlnkgwfaqylgqygrqdwqlsLRRDDNQQFGVHDTGSAAWGYALSDALRFTVSYGTAFKAPTFNELyYPDY----- 421
Cdd:PRK10064 382 -------------------------VRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQL-SPDWtsnsc 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 422 -------GNPDLDAETSRSLEVGL--SGTHGWGHW---AVNAFRTNVDDLIG----NDPRPAP-----------GRPWGQ 474
Cdd:PRK10064 436 rgackivGSPDLKPETSESWELGLyyMGEEGWLEGvesSVTVFRNDVDDRISisrtSDVNAAPgyqnfvgfetnGRGRRV 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 475 P----NNIDEARIRGVELVLGSQWL-GWDWNANATFLDPQNRSGGVNdgNELPRRARRMFNLELD---RRFERLSLGASV 546
Cdd:PRK10064 516 PvfryYNVNKARIQGVETELKIPFNdEWKLSLNYTYNDGRDVSNGEN--KPLSDLPFHTANGTLDwkpLALEDWSFYVSG 593
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15596468 547 HAEGRRYDDPANKVRLGGYATLDLRSEYRLNDEWRLQGRIANLFGAD-HETAYGYNQPGQAVYLSVRYQ 614
Cdd:PRK10064 594 NYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDlSRDDYSYNEDGRRYFMAVDYR 662
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
28-614 |
4.95e-54 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 195.88 E-value: 4.95e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 28 ADQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGkNTTLFLRGTESDHVLvlIDGIKV 107
Cdd:COG4773 49 AKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDGGG-RDSFSIRGFSIDNYL--RDGLPL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 108 GSASAGltafqDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRGDgqgAKPFFSAGYGThqtlegsagvsggagnG 187
Cdd:COG4773 126 GGFGGG-----QPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPT---AEPQGEVSLSA----------------G 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 188 WYSLGVSSFDTAG-IN-TKRAG---TAGYEpDRDGYRNLSGNLRGG------YRFDNG--LELDGTLLRAKSHNDYDQVF 254
Cdd:COG4773 182 SWDTYRATADVGGpLNeDGTLRyrlNAAYE-DGDSFRDGVDNRRTLiapsldWDLTDDttLTLGAEYQDDDSTGDRGFLP 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 255 GNSG-------FNANA-----DGEQNLVGGRARFTPFDPWLVTLQAGRSEDKADAYQ----------DG---RFYSRFDT 309
Cdd:COG4773 261 LDGTlldlprsTNLGEpwdyyDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSayaygapdaaTGtltRYASARDG 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 310 RRDSLSWQNDL-----TLAEGHVLTLGYDWQKDEISSSEAFSVDsrLNkgWFAQYLGQYGRQDWQLSLRRDDNQQFGV-- 382
Cdd:COG4773 341 DSRSDSLDANLngkfeTGGLEHTLLVGADYSRYDSDSDSATAGT--IN--IYNPVYGNLPEPDFDASDTDTTTRQTGLya 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 383 -----------------HD----------------------TGSAAWGYALSDALRFTVSYGTAFKAPTfnelYYPDYGN 423
Cdd:COG4773 417 qdqisltdrlslllggrYDwyetdstnrlggsttsyddsafTPRAGLVYDLTPGLSLYASYSESFEPQS----GADNNGN 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 424 PdLDAETSRSLEVGLSGTHGWGHWAVNA--FRTNVDDLIGNDPrpapgrpwGQPNN---IDEARIRGVELVLGSQWL-GW 497
Cdd:COG4773 493 P-LDPETGKQYEAGVKGELFDGRLNATLavFDITQKNVATTDP--------DNPNFyvqVGEVRSRGVELELSGELTpGL 563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 498 DWNANATFLDPQN-RSGGVNDGNELPRRARRMFNLELDRRF-----ERLSLGASVHAEGRRYDDPANKVRLGGYATLDLR 571
Cdd:COG4773 564 NLIAGYTYTDAKItKDADALEGKRLTNVPRHTASLWTTYRFpsgalKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAG 643
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 15596468 572 SEYRLNDEWRLQGRIANLFGADHETA---YGYNQPGQ--AVYLSVRYQ 614
Cdd:COG4773 644 ARYDLGKNWTLQLNVNNLFDKKYYASsgsRGYVYYGAprNVRLSLSYK 691
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
31-614 |
9.52e-54 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 194.53 E-value: 9.52e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 31 VVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSlANNGGFGKNTTLFLRGTESDHVLVLIDGIKVGSA 110
Cdd:TIGR01785 5 TVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVD-VTGGGRPPGQSINIRGLQDNRVLVVVDGARQNYQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 111 SAGLTAFQD-LPVELIERIEVVRGPRSSLYGSEAIGGVIQIFT-------RRGDGQGAKPFFSAGYGTHQTLEGSAGVSG 182
Cdd:TIGR01785 84 RGGAHNGSLfVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTkdaadllRPGQLFGGLAKLSYGSNNNSFGGSVAVAGR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 183 GAGNgWYSLGvsSFDTAGINTKRAGTaGYEPDRDGYRNLSGNLRGGYRFDNGLELDGTLLraksHNDYDQVFGNSGF--N 260
Cdd:TIGR01785 164 LDDN-LDALV--AATYRDGGNYRNGN-KEEATNSAYVQKNLLAKLGWQLDDAQRLEFSYF----TTEGSLDEAQNSGpgT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 261 ANADGEQNLVGGRAR----------FTPFDPWLVTLQA----GRSEDKADAYQDGRFYS---RFDTRRDSLSWQNDLTLA 323
Cdd:TIGR01785 236 EYVLGSSSTLLASSTrdrsatltynWTPEDNPWLDATAslyyNRTENDNDRSARGVGREegyQYTTYGATLQNTSRFDVA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 324 EGHVLTLGYDWQKDEI---SSSEAFSVDSRLNK--------GWFAQ-----YLGQYG-----RQDWQlSLRRDDNQQFGV 382
Cdd:TIGR01785 316 SWSTLTYGVDWMKDKRrteSFDPNSVTTIVPNPpsakeyffGLFLQdniplLDDRLTlsaglRYDHY-KLSPKTTADTEA 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 383 HDTGSAAW------GYALSDALRFTVSYGTAFKAPTFNELY-----------YPDYGNPDLDAETSRSLEVGlSGTHGWG 445
Cdd:TIGR01785 395 VDRSYSRWspslglSYKPVDWLTLYASYSQGFRAPSIDELYgtgdhpgtpggYTFAPNPNLKPETSKTWELG-ANLSFDN 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 446 HWA--------VNAFRTNVDDLI-----GNDPRPAPGRPWGQPNNIDEARIRGVELVLGSQWLGWDWNANATFLDPQNRS 512
Cdd:TIGR01785 474 LLLdndqlqfkVAYFYNDVKDFIdltigVTDNVTAGMNNITQYVNIDGARIRGIEASASYDAGLWATGLSYGYTIGKDQN 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 513 GGVNDGNELPRRARRMFNLELDRRfeRLSLGASV-HAEGRRYDDPANKV------RLGGYATLDLRSEYRLNDEWRLQGR 585
Cdd:TIGR01785 554 TNQWLSNIPPLKLVVTVGYRFPDR--RLDLGAKAaYYERQSESPTTEDVaangllTTPGYTVVDLYATYQPNAVKGLTVR 631
|
650 660 670
....*....|....*....|....*....|...
gi 15596468 586 IA--NLFGADHETAYGYNQ--PGQAVYLSVRYQ 614
Cdd:TIGR01785 632 FGvnNLTDRKYTPAQSVPGagPGRNFKGSVKYQ 664
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
31-614 |
6.37e-51 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 187.23 E-value: 6.37e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 31 VVTATRTAQ----TASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLaNNGGFGKNTTLFLRGTESDHVLVLIDGIK 106
Cdd:TIGR01786 4 TVTATRTADpqrrDLSVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSV-VEGGRGGSQGINIRGLDKNRVAVLVDGIR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 107 ----VGSASAGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFT-------RRGDGQGAKpfFSAGYGTHQTLE 175
Cdd:TIGR01786 83 qntsYGGQGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTkdaadllKPGKDLGGL--SKLGYSSANNRF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 176 GSAGVSGGAGNGWYSLgVSSFDTAGINTKRAGTAGY-------EPDRDGYRNLSGNLRGGYRFDNGLELDGTLLRAKshN 248
Cdd:TIGR01786 161 TQSVAAAGRNDDVDAL-VQATYRRGHELKNGNKANIgneskrsKPNPSDYKSQSFLAKLGWQLNDAHRLGLSLEYTQ--T 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 249 DYDQVFGNSGFNANADGEQNLVGGRARF----------------TPFDPWLVTLQAGRSEDKADAYQ-----DGRFYSRF 307
Cdd:TIGR01786 238 DYDEPEMTNTSYLTKPLGAPLLSSTVVLgdsktrdrrtgldyelNPDNSWLDTVKLALDKQYIQLYNylnatSASDYPGV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 308 DTRRDSLSWQNDLTL-----------AEGHVLTLGYDWQKDEISSSEAFSVDSRLN-----------KGWfAQYLGQYGR 365
Cdd:TIGR01786 318 DKNGRYKDKYDYYTLgfdtnnkiefsVHSLSLTYGLDRFKDKVSTGDSRRNLPTAAynlygyegenrPVK-GSNFGLFLQ 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 366 QDWQLS--------LRRD---------DNQQFGVHDTGSAAWGYALS------DALRFTVSYGTAFKAPTFNELY----- 417
Cdd:TIGR01786 397 DNIKLGdwlslsagLRYDhyktdpkadESKDYGAISKTYSRWSPSLGltykptPWLTLYYSYSQGFRAPSFDELYgtgah 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 418 -----YPDYGNPDLDAETSRSLEVGLSGTHGWGHWAVNAFRTNVDDLI----GNDPR--PAPGRPWGQPN--NIDEARIR 484
Cdd:TIGR01786 477 pgggpYTFLPNPNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDFIdlgiGVTAKgnMAQVGSNTITNyvNIDNARIR 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 485 GVELVlgsqwLGWDWNANATFLDPQNRSGGVN-------DGNEL-----PRRArrMFNLELDRRFERLSLGASVHAEGRR 552
Cdd:TIGR01786 557 GIELS-----GRYDLGSFFSGPDGWTTTLKYGytkgkdsDTNPWlnaitPLKV--VLGLGYDHPDEKWGVGLTLTFSGAK 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 553 -------------YDDPANKVRLGGYATLDLRSEYRLNDEWRLQGRIANLF----------GADHETAYGYNQPGQAVYL 609
Cdd:TIGR01786 630 davdayatyyengEAAKAGPLRTPSYTVVDLYGYYKPNKNLTLRFGVYNLLdrkyttwesaRQAGPLATGYTAPGRNYKA 709
|
....*
gi 15596468 610 SVRYQ 614
Cdd:TIGR01786 710 SVEYK 714
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
46-614 |
1.26e-48 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 179.69 E-value: 1.26e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 46 AAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGfGKNTTLFLRG--TESDhvlVLIDGIKVGSAsagltafQDLPVE 123
Cdd:COG4774 11 QSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEG-GNGDSFSIRGfsASGD---IYVDGLRDPGQ-------YRRDTF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 124 LIERIEVVRGPRSSLYGSEAIGGVIQIFTRRGdgqGAKPF--FSAGYGTHQTLEGsagvsggagngwyslgvssfdTAGI 201
Cdd:COG4774 80 NLERVEVLKGPASVLYGRGSPGGVINLVTKRP---TDEPFteVTLTYGSDGQRRA---------------------TLDV 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 202 NTKRAGTAGY---------EPDRDGYRNLSGNLRGGYRFDNG----LELDGTLLRAKSHNDY---------------DQV 253
Cdd:COG4774 136 NGPLGDDLAYrlngmyrdsDSYRDGVDNDRWGIAPSLTWRLGdrtrLTLDYEYQDDDRTPDYgvpavangrpvdvdrSTF 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 254 FGNSgfNANADGEQNLVGGRARFTPFDPWLVTLQAGRSEDKADAYQ-------DGRFYSR----FDTRRDSLSWQNDL-- 320
Cdd:COG4774 216 YGQP--DDYSDSETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNtyptggnATGTVTRsayrRDQDNDTLSNQTDLtg 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 321 ---TLAEGHVLTLGYDWQKDEISSSEAF---------------------------SVDSRLN-KGWFAQYLGQYGRQdWQ 369
Cdd:COG4774 294 kfdTGGVKHTLLAGVEYSREDSDNARYSgggtaptvnlynpvygapvtgptlggaDNDSRTDtTGLYLQDTISLTDR-WS 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 370 LS--LRRDD-----------NQQFGVHD---TGSAAWGYALSDALRFTVSYGTAFKAPTfnELYYPDYGNPDLDAETSRS 433
Cdd:COG4774 373 LLagLRYDRfdtdytdrttgATTSSYDDsafSPRAGLVYKPTPNLSLYASYSTSFNPGG--GAPSLSNAGQALDPEKSRQ 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 434 LEVGLSGTHGWGHWAVNA--FRTNVDDLIGNDPRPApgrpwGQPNNIDEARIRGVELVLGSQWL-GWDWNANATFLDPQ- 509
Cdd:COG4774 451 YEVGVKWDLLDGRLSLTAalFRIEKTNVRTTDPANP-----GVYVQTGEQRSRGVELEATGELTpGWSVLAGYTYLDAEi 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 510 -NRSGGVNDGNELPRRARRMFNLELDRRF--ERLSLGASVHAEGRRYDDPANKVRLGGYATLDLRSEYRLNDEWRLQGRI 586
Cdd:COG4774 526 tKSANAANVGNRLPNVPRHSASLWTTYDLplPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLTLRLNV 605
|
650 660 670
....*....|....*....|....*....|...
gi 15596468 587 ANLFGADH-ETAYGYNQ----PGQAVYLSVRYQ 614
Cdd:COG4774 606 NNLTDKRYyASAYGSGYvtpgAPRTVLLSASYR 638
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
1-614 |
1.16e-47 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 177.27 E-value: 1.16e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 1 MNRVFLTPAAVALCGASSLSLAEP-VSLADQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLAnn 79
Cdd:PRK13483 6 AQVISALCLLPAVFVTHALAQAAPdKTMETVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGVVVT-- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 80 gGFGKNTTLFLRGTESDHVLVLIDG-------IKVGSASAGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFT 152
Cdd:PRK13483 84 -GGGDRTDISLRGMGSQYTLILVDGkrqssreTRPNSDGPGVEQAWTPPLAAIERIEVIRGPMSSLYGSDAIGGVINIIT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 153 RRGDGQgakpfFSAGYGTHQTLEGSAGVSGGAGNGWYSLGVSSFDTAGIN-----TKRAG---TAGYEpDRDGyRNLSG- 223
Cdd:PRK13483 163 RKVPNE-----WQGEVRLDTTLQENSDSGNVYQANFFVNGPLIKDLLGLQlygqyTQREEddiEGGYR-DKDA-RSLTAk 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 224 -NLRGGYRFDNGLE-------LDGTLLRAKSHNDYDQVFGNSGFNANADG--EQNLVG----GRARFTPFDPWlvtLQAG 289
Cdd:PRK13483 236 lALTPNEDHDIMLEvgtsnqeRDSTVGKTVAPLAPGESCGRRGCPESSTTeyERSTVSlshtGRWDFGTSDTY---IQHE 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 290 RSEDKAdayqdgRFYSRFDTRRDSlSWQndLTLAEGHVLTLGYDWQKDEI---SSSEAFSVDSRLNKGW--FAQylgqyg 364
Cdd:PRK13483 313 EFDNKS------REMKIKNTDFQS-SLV--APLGQEHTLTFGAAYNHQDLtdeTSNQISDLTDISRTQWavFSE------ 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 365 rQDWQLS--------LRRDDNQQFGVHDTGSAAWGYALSDalRFTVSYG--TAFKAPTFNELyYPD----------YGNP 424
Cdd:PRK13483 378 -DEWRIAddfaltggLRLDHDENFGGHVSPRVYGVWNLAP--SWTVKGGvsTGFRAPSLRQT-TPDwgqvsrggniYGNP 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 425 DLDAETSRSLEVGLSGTHGWGHWA-VNAFRTNVDDLIGNDPRPAPGRPWGqPN----------NIDEARIRGVELVLGSQ 493
Cdd:PRK13483 454 DLKPETSLNKELGLYYDLGSGLTAsLTVFYNEFKDKITRVACPATQCTDG-PNqfgadpttyvNIDEAVTQGVEASLSYP 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 494 WL-GWDWNANATFLDPQNRSGGVNdGNELPRRARRMFNLELD-RRFERLSLGASVHAEGRRyDDP-----ANKVRLGGYA 566
Cdd:PRK13483 533 ITsTLSLSGNYTYTDSEQKSGAYK-GSPLNQLPKHLFQASLNwEPTDRLNSWARVNYRGEE-SQPttgpsSSSFIAPSYT 610
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 15596468 567 TLDLRSEYRLNDEWRLQGRIANLFGAD-HETAYGYNQPGQAVYLSVRYQ 614
Cdd:PRK13483 611 FLDLGANYQLTDNLKLSAGIYNLFDKEiNYEEYGYVEDGRRYWLGMTYS 659
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
152-614 |
6.17e-42 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 158.01 E-value: 6.17e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 152 TRRGDGQGAKPFFSAGYGTHQTLEGSAGVSGGAGNGWYSLGVSSFDTAGINTKRAGTAGYEPDRDGYRNLSGNLRGGYRF 231
Cdd:pfam00593 8 LLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRY 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 232 D--------NGLELDGTLLRAKSHNDYDQVFGNSGFNANADGEQNLVGGRARFTPFDPWlVTLQAGRSEDKADAYQDGRF 303
Cdd:pfam00593 88 SsldgdytsNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDY-RRLDDDAYDPYDPANPSSSS 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 304 YSRFDTRRDSLSWQNDLTLAEGHVLTLG--YDWqkdeissseaFSVDSRLNKGWFAQYLGQYGRQDWQLSLRrddnqqfg 381
Cdd:pfam00593 167 YSDTTTDSYGLYLQDNIKLTDRLTLTLGlrYDH----------YSTDGDDGNGGGDNFSRSYSAFSPRLGLV-------- 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 382 vhdtgsaawgYALSDALRFTVSYGTAFKAPTFNELYYP---------DYGNPDLDAETSRSLEVGLSGTHGWGHWAVNAF 452
Cdd:pfam00593 229 ----------YKPTDNLSLYASYSRGFRAPSLGELYGSgsgggggavAGGNPDLKPETSDNYELGLKYDDGRLSLSLALF 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 453 RTNVDDLIGNDPRPAPGRPWG-QPNNIDEARIRGVELVLGSQ-WLGWDWNANATFLDPQNRSGGVNDGNELPRRARRMFN 530
Cdd:pfam00593 299 YIDIKNLITSDPDGPGLGGTVyTYTNVGKARIRGVELELSGRlWGLGLSGGGYTYTDADDDADADDTGNPLPNVPRHTAN 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 531 LELDRRFERLSLGASVHAE-----GRRYDDPANKVRLGGYATLDLRSEYRLNDEWRLQGRIANLFGADHET--------A 597
Cdd:pfam00593 379 LGLTYDFPLGGWGARLGARyvgsgERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRyyssgggnL 458
|
490
....*....|....*..
gi 15596468 598 YGYNQPGQAVYLSVRYQ 614
Cdd:pfam00593 459 GGYPGPGRTFYLGLSYK 475
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
1-590 |
9.37e-38 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 148.76 E-value: 9.37e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 1 MNRVFLTPAAVALCGASSLS-----LAEPVSLADQ---VVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVP 72
Cdd:PRK13513 1 VNQRFRKTHKAALVIAAAISsqayaAEKTNTATPTdtmVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 73 GVSLAnnGGfGKNTTLFLRGTESDHVLVLIDGIKVGSAS-------AGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIG 145
Cdd:PRK13513 81 GVVVT--GG-GSTSDISIRGMAAKYTLILVDGKRVDTRStrpnsdgSGIEQGWLPPLAAIERIEVVRGPMSSLYGSDAMG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 146 GVIQIFTRRgdgqgakpffsAGYGTHQTLEGSAGVSGGAGNGwySLGVSSFDTAGintkragtagyePDRDGYRnlsgnl 225
Cdd:PRK13513 158 GVINIITRK-----------VQKEWHGSLRADATLQEDSKSG--DIFQTNAYASG------------PLIDGLL------ 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 226 rggyrfdnGLELDGTLlrakSHNDYDQVFGnsGFNanadgEQNLVGGRARF--TPFDPWLVTLQAGRSEDKADA------ 297
Cdd:PRK13513 207 --------GLKVSGLL----SHRSEDKIID--GYN-----EQRMRNGTATFslTPDDNNEFDFEIGRYVQDRNStpgrtl 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 298 -----------------------YQDGR---FYSRFDTRRDSLSWQNDLTLA--------EGHVLTLG--YDWQK----- 336
Cdd:PRK13513 268 alngtnsdtqydrnnyaithngyYDFGNstsYIQRDETRNPSRQMKSVDTIFntqtsfllDDHTLSLGgqYRYEElydkg 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 337 DEISSSEAFSVDSRLNKGWFAQylgqygrQDWQLS--------LRRDDNQQFGVHDT----------------GSAAWGY 392
Cdd:PRK13513 348 NQLPSASDLNKLTRWSWALFAE-------DEWQMTndfaltggIRMDQDQNYGTHWTprlygvwhladqwtlkGGVSTGY 420
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 393 ALSDALRFTVSYGTAFKAPTFNELYypdYGNPDLDAETSRSLEVGLSGTHGWGHWA-VNAFRTNVDDLI----------G 461
Cdd:PRK13513 421 RSPDLRQATDNWGQLTGGGGLPALI---LGNSDLKPEKSISQEIGILWDNQENLNAsVTLFNTDFKDKItevrncdttnT 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 462 NDPRPAPGRPW---GQPNNIDEARIRGVELVLGsqWL---GWDWNANATFLDPQNRSGGVNdGNELPRRARRMFNLELD- 534
Cdd:PRK13513 498 DGQCVFNGINYdfiSDRINVDKANMRGVEATFN--WDinqAWSLATNYTFTQSEQKSGAFA-GQPLNQMPKHMANATLNw 574
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 535 RRFERLSLGASVHAEGRRyDDPANKVRLG----GYATLDLRSEYRLNDEWRLQGRIANLF 590
Cdd:PRK13513 575 QTTEDFATWIRINYRGKT-SEYLNRTSMGsgtpSYTFVDLGASYQLTKELRLMGGVYNLL 633
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
47-614 |
3.22e-36 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 144.09 E-value: 3.22e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 47 AVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGKNTTLFLRG--TESDHVLVLIDGIKVGSAsaglTAFQDLPVEL 124
Cdd:TIGR01783 5 SVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGfgLEVDIDNVYLDGVPLLSR----GNLAIVDPAM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 125 IERIEVVRGPRSSLYGSEAIGGVIQIFTRRGDGQGAKPF-----FSAGYGTHQTLEG---SAGVSGGAGNGWYSLGVSSF 196
Cdd:TIGR01783 81 VERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVtfgagTRSGYRTAFDLGGplgADGTFRGRLNGARQDGDSFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 197 DTAGINTkRAGTAGYEPDRDGYRNLSGNLRGGYRFDNGLELDGTLLRAKSHNDYDQVF--GNSGFNANADGEQNLVGGRA 274
Cdd:TIGR01783 161 DGAGEET-RLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRylGTSSNRNYDDREYLSYGLSL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 275 RFTPFDPWLVTLQAGRSEDKADAYQ------------DGRFYSRFDTRRDSLSWQNDL-----TLAEGHVLTLGYDWQK- 336
Cdd:TIGR01783 240 EYQFNDVWTGKQNLRYSYFDTDSNQvqasgyssdgglFGRSLTVVNVKQDRVQIDAGLdgefeTGPIEHDLLLGVSYGQr 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 337 ------------DEISSSEAFSVDSRLNkGWFAQYLGQYGRQD---------------WQLSL--------RRDDNQQFG 381
Cdd:TIGR01783 320 ttnrfnntgypsDNIYSLTATSSARTDI-GDSPKDRALSSTTKalngvalqrilladkWTLTLggrydsvdVKSNNGVAG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 382 VHDTGSAAW-------GYALSDALRFTVSYGTAFKAPTFNELYYpDYGNPDLDAETSRSLEVGLSGTHGwGHWAVNA--F 452
Cdd:TIGR01783 399 STGKRDDSQftpslgvAYKPTDDWSLYASYAESFKPGGYYPKGA-GNSGDILEPEKGKNYELGVRYDLG-DSLLATAalF 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 453 RTNVDDLIGNDPRPAPgrpwgQPNNIDEARIRGVElvLGSQW---LGWDWNANATFLDPQNRSG--GVNDGNELPRRARR 527
Cdd:TIGR01783 477 RITKDNQLVQDPVNGT-----FSVNAGKTRNRGVE--LEARGyltPGLSLSAGYTYTDAEFTEDtnGDTQGNTVPFVPKH 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 528 MFNLELDRRFE----RLSLGASVHAEGRRYDDPANKVRLGGYATLDLRSEYRL--NDEWRLQGRIANLFGADHETAYG-- 599
Cdd:TIGR01783 550 TASLWASYAPPvgdnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLtkKKNLTLALNVNNLFDRDYYTSGYrw 629
|
650 660
....*....|....*....|.
gi 15596468 600 ------YNQPGQAVYLSVRYQ 614
Cdd:TIGR01783 630 gpsayiYPGAPRTVGLSVSYD 650
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
1-614 |
8.99e-35 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 140.16 E-value: 8.99e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 1 MNRVFLTPAAVALCGASSLSLAE-----------PVSLADQVVTAtrtAQTASQSLAaVSVIDREDIE-RSQARSVPELL 68
Cdd:PRK13524 1 MNKKIHSLALLVNLGIYGVAQAAeaedaktddtpASHEDTIVVTA---AEQNLQAPG-VSTITAEDIRkRPPANDVSEII 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 69 RQVPGVSLANN---GGFGKNTTLFLRGTESDHVLVLIDGIKVGSASA---GLTAFQD-------LPVELIERIEVVRGPR 135
Cdd:PRK13524 77 RTMPGVNLTGNstsGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNSvryGWRGERDtrgdtnwVPPEMIERIEVLRGPA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 136 SSLYGSEAIGGVIQIFTRRGDGQgakpffsagygTHQTLEGSAGVSGGAGNGW---YSLGVS-------SF--------- 196
Cdd:PRK13524 157 AARYGNGAAGGVVNIITKKPTGE-----------WHGSWNTYFNAPEHKAEGAtkrTNFSLSgplgdelSFrlygnlnkt 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 197 --DTAGIN----TKRAGT-AGYEP-DRDGYRN--LSGNLRggYRFD--NGLELDGTLLRAKSH--NDYDQVFGNSGFNAN 262
Cdd:PRK13524 226 qaDAWDINqghqSARTGSyAGTLPaGREGVINkdINGLLR--WDFAplQSLELEAGYSRQGNLyaGDTQNTNSDALVKSL 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 263 ADGEQNL-------VGGRARFTPFDPWLVTLQ-------------AGRSEDKADAYQDGRFYSRFDTRRDSLSWQNDLTL 322
Cdd:PRK13524 304 YGKETNRmyrqnyaLTHRGGWDNGVSTSNYAQyehtrnsrlpeglAGGTEGIFNEKATQFSTIDLDDVMLHSEVNLPFDL 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 323 AEGHVLTLGYDWQ----KDEISSSEAFSV------------DSRLNKGWFAQYL--GQYGRQDWQLS--LRRDDNQQFGV 382
Cdd:PRK13524 384 LVNQTLTLGTEWNqqrmKDPSSNTQALTSggaipgvsatgrSPYSKAEIFSLFAedNMELTDSTMLTpgLRFDHHSIVGN 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 383 HDTGSAAWGYALSDAlrFTVSYGT--AFKAPTfneLYY--PDY--------------------GNPDLDAETSRSLEVGL 438
Cdd:PRK13524 464 NWSPSLNLSQGLGDD--FTLKMGIarAYKAPN---LYQtnPNYilyskgqgcyasagngcylqGNDDLKAETSVNKEIGL 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 439 SGTHGWGHWAVNAFRTNVDDLI--GNDP--RPAPGRP----WGqpnNIDEARIRGVELVLGSQWLG-WDWNANATF-LDP 508
Cdd:PRK13524 539 EFKRDGWLAGLTWFRNDYRNKIeaGYVPvgTNSVGKTdiyqWE---NVPKAVVEGLEGTLNVPVSEtVNWTNNLTYmLQS 615
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 509 QNRSggvnDGNELPRRARRMFNLELDRRF-ERLSLGASVHAEGR----RYDDPANKVR------LGGYATLDLRSEYRLN 577
Cdd:PRK13524 616 KNKT----TGDPLSIIPEYTLNSTLSWQAtEDLSLQSTFTWYGKqkpkKYNYKGQPVTgsatkeVSPYSIVGLSATYDVT 691
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 15596468 578 DEWRLQGRIANLFGADH---------------ETAYGYNQPGQAVYLSVRYQ 614
Cdd:PRK13524 692 KNVSLTGGVDNLFDKRLwregnaqttgdliagAGAYTYNEPGRTYYMSLNTH 743
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
2-577 |
4.33e-33 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 134.75 E-value: 4.33e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 2 NRVFLTPAAVALCGA--SSLSLAEPVSLADQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLanN 79
Cdd:PRK13484 3 NKYIIAPGIAVMCSAviSSGYASSDKKEDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISI--T 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 80 GGFGKNTtLFLRGTESDHVLVLIDGIKVGS------ASAGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTR 153
Cdd:PRK13484 81 GGNEKPD-ISIRGLSGDYTLILVDGRRQSGresrpnGSGGFEAGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 154 RGDGQGAKPFFSAGygthQTLEGSAGVSGGAGNGWY--------SLGVSSFdtAGINTKRAGTAGYEPDRDGYRNLSGNL 225
Cdd:PRK13484 160 PVNNQTWDGVLGLG----GIIQEHGKFGNSTTNDFYlsgplikdKLGLQLY--GGMNYRKEDSISQGTPAKDNKNITATL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 226 R------GGYRFDNGL-ELDGTLLRAKSHNDYDQVFG----NSGFNANADGEQNLVGGRARFTPFDPWLVTLQAG----R 290
Cdd:PRK13484 234 QftptesQKFVFEYGKnNQVHTLTPGESLDAWTMRGNlkqpNSKRETHNSRSHWVAAWNAQGEILHPEIAVYQEKvireV 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 291 SEDKADAYQDGRFysRFDTRRDSLSwqNDLTLAE------GHVLTLGYDWQ----KDEISSSEAFSVDSRLNKGWFAQYL 360
Cdd:PRK13484 314 KSGKKDKYNHWDL--NYESRKPEIT--NTIIDAKvtaflpENVLTIGGQFQhaelRDDSATGKKTTETQSVSIKQKAVFI 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 361 -GQYGRQDwQLSL----RRDDNQQFGVHDTGSAAWGYALSDALRFTVSYGTAFKAPTFNELyYPD------------YGN 423
Cdd:PRK13484 390 eNEYAATD-SLALtgglRLDNHEIYGSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREV-SPGfgtltqggasimYGN 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 424 PDLDAETSRSLEVGLSGTHGWGHWA-VNAFRTNVDDLIGN----DPRPAPGRPWGQPNNIDEARIRGVELVLG-SQWLGW 497
Cdd:PRK13484 468 RDLKPETSVTEEIGIIYSNDSGFSAsATLFNTDFKNKLTSydigTKDPVTGLNTFIYDNVGEANIRGVELATQiPVYDKW 547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 498 DWNANATFLDPQNRS------GGVNDGNELPRRARRMFNLELDRRF-ERLSLGASVHAEGR------RYDDPANKVRlGG 564
Cdd:PRK13484 548 HVSANYTFTDSRRKSddeslnGKSLKGEPLERTPRHAANAKLEWDYtQDITFYSSLNYTGKqiwaaqRNGAKVPRVR-NG 626
|
650
....*....|...
gi 15596468 565 YATLDLRSEYRLN 577
Cdd:PRK13484 627 FTSMDIGLNYQIL 639
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
40-147 |
1.13e-31 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 118.53 E-value: 1.13e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 40 TASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGfGKNTTLFLRGTESDHVLVLIDGIKVGSASAGLTAFQD 119
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGG-GGGSSISIRGFGSNRVLVLVDGVPLNSGGGGSVDLNS 79
|
90 100
....*....|....*....|....*...
gi 15596468 120 LPVELIERIEVVRGPRSSLYGSEAIGGV 147
Cdd:pfam07715 80 IDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
5-611 |
8.95e-31 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 127.95 E-value: 8.95e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 5 FLTPAAVALCGASSLSLAEPVSLADQVVTATRTAqTASQSLA---AVSVIDREDIE-RSQARSVPELLRQVPGVSLANN- 79
Cdd:PRK13528 8 ILWLLTVLLVGLNSPVSAAESSDDDNGETMVVEA-TAEQELKqqpGVSIITAEDIKkRPPVNDLSDIIRKMPGVNLTGNs 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 80 --GGFGKNTTLFLRGTESDHVLVLIDGIKVGSASA---GLTAFQD-------LPVELIERIEVVRGPRSSLYGSEAIGGV 147
Cdd:PRK13528 87 asGTRGNNRQIDIRGMGPENTLILIDGVPVTSRNSvrySWRGERDtrgdtnwVPPEMVERIEVIRGPAAARYGSGAAGGV 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 148 IQIFTRRgdgQGAKPFFSAGYGTHQ---TLEGSAGVSGGAGNGWYSLGVSSF-----------DTAGINTKRAG--TAGy 211
Cdd:PRK13528 167 VNIITKR---PTNDWHGSLSLYTNQpesSKEGATRRANFSLSGPLAGDALTMrlygnlnktdaDSWDINSSAGTknAAG- 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 212 epdRDGYRN--LSGNLRGGYRFDNGLELDGTLLRakSHNDYDQVFGNSGFNANADG------EQNLV------------- 270
Cdd:PRK13528 243 ---REGVRNkdINGVLSWKMTPQQILDFEAGYSR--QGNIYAGDTQNSNSSAVTESlaksgkETNRLyrqnyglthngiw 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 271 -GGRARFT-PFDPWLVTLQ----AGRSEDKADAyqDGRF-YSRFDTRRDSLSWQNDLTLAEGHVLTLGYDWQKDEIS--S 341
Cdd:PRK13528 318 dWGQSRLGfYYEKTNNTRMneglAGGGEGRITA--DQTFtTSRLESYRTSGELNVPLNWLFEQTLTVGAEWNRDELNdpS 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 342 SEAFSVDSRLNKGWFAQYLGQYGRQDWQLS-------------------LRRDDNQQFGVHDTGSAAWGYALSDALRFTV 402
Cdd:PRK13528 396 STSLTVKDGDIGGISGSAADRSSKNKSEISalyvedniepvpgtnlipgLRFDYHSEFGSNWSPSLNLSQELGDYFKVKA 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 403 SYGTAFKAPTF-----NELYYP-------DY--------GNPDLDAETSRSLEVGLSGTHGWGHWAVNAFRTNVDDLI-- 460
Cdd:PRK13528 476 GIARAFKAPNLyqsseGYLLYSrgngcpkDItsggcylvGNKNLDPEISVNKEIGLEFTVDDYHASVTYFRNDYQNKIva 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 461 GNDP--RPAPGRPWGQPNNIDEARIRGVE----LVLGSQWLgwDWNANATF-LDPQNRSggvnDGNELPRRARRMFNLEL 533
Cdd:PRK13528 556 GDDVigRTASGAYILQWQNGGKAVVEGLEgnllVPLMKDRL--NWNTNATYmITSEQKD----TGNPLSVIPKYTINSTL 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 534 DRRF-ERLSLGASV----------HAEGRRYDDPANKVR-LGGYATLDLRSEYRLNDEWRLQGRIANLFGA----DHETA 597
Cdd:PRK13528 630 DWQItQALSANVNWtlygkqkprtHAESRSEETGGLSGKeLGAYSLVGVNVNYDINKNLRLNVGVSNLFDKqiyrEGEGA 709
|
730
....*....|....
gi 15596468 598 YGYNQPGQAVYLSV 611
Cdd:PRK13528 710 NTYNEPGRAYYAGV 723
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
16-614 |
2.35e-30 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 126.67 E-value: 2.35e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 16 ASSLSLAEPVsladQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGKNTTLFLRGTES 95
Cdd:PRK13486 18 ASSIAAAEDV----MIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGLEISIRGMPA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 96 DHVLVLIDGIKVGSAS--------AGLTAFQDlPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRgdgQGAKPFFSAG 167
Cdd:PRK13486 94 SYTLILIDGVRQGGSSdvtpngfsAMNTGFMP-PLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRK---NADKWLSSVN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 168 YGTHQTlEGSAGVSGGAGNGWYS----LGVSSFDTAGINTKRAGT-----AGYEPDRDGYRNLSGNLRGGYRFD------ 232
Cdd:PRK13486 170 AGLNLQ-ESNKWGNSSQFNFWSSgplvDDSVSLQVRGSTQQRQGSsvtslSDTAATRIPYPTESQNYNLGARLDwkaseq 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 233 NGLELDGTLLRAKSHNDYDQVFG-NSGFNANADGEQNLV--GGRARFTpFDPWLVTLQAGRSEDKA-----DAYQDGRFY 304
Cdd:PRK13486 249 DVLWFDMDTTRQRYDNRDGQLGSlTGGYDRTLRYERNKIsaGYDHTFT-FGTWKSYLNWNETENKGrelvrSVLKRDKWG 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 305 SRFDTR--RDSLSWQNDLTLA---EGHVLTLGYDWQ----KDEI---SSSEAFSvdsrlNKGWFAqylgqYGRQDWQLS- 371
Cdd:PRK13486 328 LAGQPRelKESNLILNSLLLTplgESHLVTVGGEFQsssmKDGVvlaSTGETFR-----QKSWSV-----FAEDEWHLTd 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 372 -------LRRDDNQQFGVHDTGSAAWGYALSDALRFTVSYGTAFKAPTFNELY-----------YPDYGNPDLDAETSRS 433
Cdd:PRK13486 398 alaltagSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHkgisgvsgqgkTNLLGNPDLKPEESVS 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 434 LEVGLSGTHGWGHWA-VNAFRTNVDDLIGNDPRPAPGRPWgqpNNIDEARIRGVELVLGSQWLGWD--WNANATFLDPQN 510
Cdd:PRK13486 478 YEAGVYYDNPAGLNAnVTGFMTDFSNKIVSYSINDNTNSY---VNSGKARLHGVEFAGTLPLWSEDvtLSLNYTWTRSEQ 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 511 RSGGvNDGNELPRRARRMFNLELDRRF-ERLS--LGASVHAEGRR---------------YDDPANKVRlgGYATLDLRS 572
Cdd:PRK13486 555 RDGD-NKGAPLSYTPEHMVNAKLNWQItEEVAswLGARYRGKTPRftqnysslsavqkkvYDEKGEYLK--AWTVVDAGL 631
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15596468 573 EYRLNDEWRLQGRIANLFGADHE----------TAY------------GYNQPGQAVYLSVRYQ 614
Cdd:PRK13486 632 SWKMTDALTLNAAVNNLLNKDYSdvslysagksTLYagdyfqtgssttGYVIPERNYWMSLNYQ 695
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
31-503 |
4.64e-13 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 72.37 E-value: 4.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 31 VVTATRTAQTASQSL--AAVSVID---REDIERSQARSVPELLRQVPGVSLANNGGFGKNTTlfLRGTESDHVLVLIDGI 105
Cdd:TIGR01782 5 QVTGQRASLEKAIDAkrDADSVVDvisAEDIGKLPDVNVAEALQRVPGVSIERDQGEGRYVS--VRGLGPSYNRTTLNGR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 106 KVGSASAGLTAFQ--DLPVELIERIEVVRGPRSSLYGSeAIGGVIQIFTRRG-DGQGAKPFFSAGYG------------- 169
Cdd:TIGR01782 83 TIASTDSGGRAFSldLLPSELVSGVEVYKTPTADMDEG-GIGGTVDLRTRSPfDYDGRTLSGSAQGGyndlagkdkpgpr 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 170 --------------------THQTLEGSAGVSGGAGNGWYSLGVSSFDTAGINTkRAGTAGYEPDRdgyRNLSGNLRGGY 229
Cdd:TIGR01782 162 gaasyswtfgdgqfgvllsaSYQKRDFAEDNVETENWGTYTSADGGAQGLYFPR-GVRYRSYRNDR---ERKGVNGSLQW 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 230 RFDNGLELDGTLLRAKSHNDYDQV--FGNSGFNANADGEQNLVGGRARFTPFDPWLVTLQA-GRSEDKADAYQDGRFysR 306
Cdd:TIGR01782 238 RPSDALELYLDTLYSKYDDDETRQqiEFRTLNGGSTVITSNQTATSGALVQGTVANLQILVeARYNEEKETTTSLTL--G 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 307 FDTRRDSLSWQNDLTLAEGhvlTLGYDWQKDEISSSEAFSVD------SRLNKGWFAQY---LGQYGRQDWQLSlRRDDN 377
Cdd:TIGR01782 316 GEWTGDRWTLDGDLGYSKA---TRDRPDRVTRFFTAPTPGYDfdyrggPTLTLGTPADGddaSNYTNPANGELR-RTQIS 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 378 QQFGVHDTGSAAWGYA---LSDALRFTVSYGTAFKAPTFNELYYPDYGNPDLDAETSRSLEVGLSGTHGWGHWAVNAFRT 454
Cdd:TIGR01782 392 YQKAEDSEDAAQLDATfdgPFTSLKFGVRYRRRDKTNRGSRYRRSIIGATGASGLAGVPSDLAGAGLDGGLGGPLTGWDP 471
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 15596468 455 NVDDLIGNDPRPAPGRPWGQPNNIDEARIRGVELVLGSQWL------GWDWNANA 503
Cdd:TIGR01782 472 ADLDAFLNAARGDAAGGGTYTYASTAPNTYTVTEDTTAAYAmanfdtGLRLRGNV 526
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
31-155 |
2.07e-11 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 67.23 E-value: 2.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 31 VVTATRTAQTASQSlAAVSVIDREDIERSQARSVPELLR-QVPGVSLANN-GGFGKNTTLFLRG----TESDHVLVLIDG 104
Cdd:TIGR04056 82 VVVGYGTQKKKSLT-GAVSTVKAKELKKVPVSNLSNALQgKVAGVIITQSsGEPGGDAEIWIRGissfGGNNSPLYVIDG 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 15596468 105 IkvgsasAGLTAFQDLPVELIERIEVVRGPRS-SLYGSEAIGGVIQIFTRRG 155
Cdd:TIGR04056 161 V------PRDNGLSDLNPEDIESISVLKDASAtAIYGSRGANGVILITTKRG 206
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
2-154 |
1.86e-10 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 64.05 E-value: 1.86e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 2 NRVFLTPAAVALCGASSLSLAEPVS--LADQVVTATRTAQTASQSLAAVSVIDREDIE-RSQARSVPELLRQVPGVSLAN 78
Cdd:PRK14050 35 NTTQLETIVVEGGNAASATATGPVDgyVAKATATGSKTDTPITEIPQSVSVVGRQEMDdRGVTNKVDEALRYTPGVLSQP 114
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15596468 79 NGGFGKNTTLFLRGTESDHVLVLIDGIKVgsASAGLTAFQDLPVeLIERIEVVRGPRSSLYGSEAIGGVIQIFTRR 154
Cdd:PRK14050 115 FGTDGDTDWFYIRGFDATQTGVFLDGLNL--FSYGFGGFQIDPF-MLERVEVLKGPASVLYGGSNPGGIVNMVSKR 187
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
28-154 |
1.68e-09 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 60.93 E-value: 1.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 28 ADQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGKNTTLFLRGTESDHVLV--LIDGI 105
Cdd:PRK10044 63 AKRSATGTKTDTPIEKTPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQSQnnYLDGL 142
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 15596468 106 KVGSASagLTAFQDLPVELiERIEVVRGPRSSLYGSEAIGGVIQIFTRR 154
Cdd:PRK10044 143 KLQGNF--YNDAVIDPYML-ERAELMRGPVSVLYGKSNPGGLLNMVSKR 188
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
6-170 |
2.34e-06 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 50.58 E-value: 2.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 6 LTPAAVALCGASSLSLAEPVSLADQVVTATRTAQTAS----QSLA----AVSVIDREDIERSQARSVPELLRQVPGVS-- 75
Cdd:PRK09840 25 ITPVAQALAAEGQTNADDTLVVEASTPSLYAPDQSADpkfsQPLAdttqTITVISEQVIKDQGATNLTEALRNVPGVGtf 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 76 -LANNGGFGKNTTLFLRGTESDHVlVLIDGIK-VGSASAGLtaFQdlpvelIERIEVVRGPRSSLYGSEAIGGVIQIFTR 153
Cdd:PRK09840 105 fAGENGNTTTGDAIYMRGFDTSNS-IYVDGIRdIGSISRDT--FN------TEQVEVIKGPSGTDYGRSAPTGSINMISK 175
|
170 180
....*....|....*....|
gi 15596468 154 RG---DGQGAkpffSAGYGT 170
Cdd:PRK09840 176 QPrndSGIDA----SASIGS 191
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
27-154 |
6.07e-05 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 46.05 E-value: 6.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 27 LADQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGvslANNGGFG---KNTTLFLRGTESDHVLVLID 103
Cdd:PRK14049 62 VATSSATGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPG---ARVGAFGfdpRFDAFFVRGFDVTYTGVFRD 138
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 15596468 104 GIKVGSASAGLtaFQDLPVELiERIEVVRGPRSSLYGSEAIGGVIQIFTRR 154
Cdd:PRK14049 139 NLRQPGASSSI--FKTEPYGL-EGVSILRGPSSALYGASGAGGLFNLITKR 186
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
7-608 |
2.74e-04 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 44.09 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 7 TPAAVALCGASSL----SLAEPVSLADQVVTATRTAQTASQSL---------------------AAVSVIDREDIERSQA 61
Cdd:PRK10003 16 KPSLLAGCIALALlpsaAFAAPATEDTVIVEGSATAPVDDGEQdysvkttsagtkmqmtqrdipQSVSIVSQQRMEDQQL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 62 RSVPELLRQVPGVSLANNGGfgKNTTLFLRGTESDHVLVliDGI--------KVGSAsAGLTAfqdlpveLIERIEVVRG 133
Cdd:PRK10003 96 QTLGEVMENTLGISKSQADS--DRALYYSRGFQIDNYMV--DGIptyfesrwNLGDA-LSDTA-------LFERVEVVRG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 134 PRSSLYGSEAIGGVIQIFTRRGDGQGAKPFFSAGYGThqtlegsagvsggagngW----YSLGVSSFDTAGINTKRAGTA 209
Cdd:PRK10003 164 ATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGS-----------------WnkqrYVADLQSPLTEDGKVRARIVA 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 210 GYEP-----DRDGYRN--LSG----------NLRGGY---RFDNGLELDGTLLR---AKSHNDYDQVFGNSGFNANADGE 266
Cdd:PRK10003 227 GYQNndswlDRYNSEKtfFSGivdadlgdltTLSAGYeyqRIDVNSPTWGGLPRwntDGSSNSYDRARSTAPDWAYNDKE 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 267 QNLVGG--RARFTpfDPWLVTLQAGRSEDK-------ADAYQD---------------------GRFYSRFDTRRDSLSw 316
Cdd:PRK10003 307 INKVFMtlKQRFA--DTWQATLNATHSEVEfdskmmyVDAYVDkatgmlvgpysnygpgfdyvgGTGWNSGKRKVDALD- 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 317 qndlTLAEG--------HVLTLG--YDWQKDEISSSEAFSVDSRLnkGWFAQYLGQYGRQDW--QLSLRRDDNQQFGVHd 384
Cdd:PRK10003 384 ----LFADGsyelfgrqHNLMFGgsYSKQNNRYFSSWANIFPDEI--GSFYNFNGNFPQTDWspQSLAQDDTTHMKSLY- 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 385 tgsAAWGYALSDAL------RFT------VSYGTAFKAPT------------------FNELYYP----DYGNPDLDAET 430
Cdd:PRK10003 457 ---AATRVSLADPLhlilgaRYTnwrvdtLTYSMEKNHTTpyaglvydindnwstyasYTSIFQPqndrDSSGKYLAPIT 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 431 SRSLEVGLSGthGWGHWAVNA----FRTNVDDLIGNDPRPAPGRPwGQP--NNIDEARIRGVELVL-GSQWLGWDWNANA 503
Cdd:PRK10003 534 GNNYELGLKS--DWMNSRLTTtlaiFRIEQDNVAQSTGTPIPGSN-GETayKAVDGTVSKGVEFELnGAITDNWQLTFGA 610
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596468 504 T-FLDPQNRSGGVNDgnELPRRARRMFNLELDRRFERLSLGASVHAEGRRYDD---PANKVRL--GGYATLDLRSEYRLN 577
Cdd:PRK10003 611 TrYIAEDNEGNAVNP--NLPRTTVKLFTRYRLPVMPELTVGGGVNWQNRVYTDtvtPYGTFRAeqGSYALVDLFTRYQVT 688
|
730 740 750
....*....|....*....|....*....|.
gi 15596468 578 DEWRLQGRIANLFGADHETaygyNQPGQAVY 608
Cdd:PRK10003 689 KNFSVQGNVNNLFDKTYDT----NVEGSIVY 715
|
|
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