|
Name |
Accession |
Description |
Interval |
E-value |
| flgK |
PRK05683 |
flagellar hook-associated protein FlgK; Validated |
2-682 |
0e+00 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235558 [Multi-domain] Cd Length: 676 Bit Score: 923.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 2 SDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQ 81
Cdd:PRK05683 1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTVQTTKASQQSGAGYIGTGTTLADVRRIYNSFLDTQLRTATSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 82 NSELNAFLGQIDQLNSLLADNTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQQ 161
Cdd:PRK05683 81 NSDASAYLGQISQLDKLLSDSTTGISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQQNSNINSQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 162 LGALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNsVSLFIGSGQPLVVGNTVST 241
Cdd:PRK05683 161 LSAMTDQVNNLTTSIASYNKQIAQASASGATPNDLLDARDEAVRQLNELVGVTVVERDGN-YDVYIGSGQPLVVGNTANT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 242 LSVVPGLDDPTRYQVQLTLGDSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLAGKAGA 321
Cdd:PRK05683 240 LSVVPGPSDPSRYNVQLNRGSSTQDVTSVVSGGEIGGLLRYRSDVLDPAMNELGRLALVVADQINSQLGQGIDLNGNFGS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 322 NLFGDINDPDITALRVLAKNGNT-GNVHANLNITDTSKLNSSDFRLDFDG-TNFTARRLGDDASMqvtvsgtGPYTLSFK 399
Cdd:PRK05683 320 SLFGDINSADAISQRSLAKNGNSaGSGNLNVTIKDTSKLTTSDYEVTFTSaTNYTVRRLSDGTDM-------GSFDLSDN 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 400 DANGVDqGFSVTLD-QLPAAGDRFTLQPTRRGASDIETTLKNASQLAFAGSARAEATTNNRGSGAIGQPNL---VDGPSP 475
Cdd:PRK05683 393 PAPVID-GFSLSLNgGTLAAGDSFKVTPTRNAASDIETVLTDPKKLAFAAPLTAEAGSGNSGTGSITQPTLtskLDIYDP 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 476 IDPAVLQNAFgANGLPLSATVSADgktytmtSPLPAGWSYVDKDGNALpGSPTLNSGTSNSVRMAYTD------PGSGQT 549
Cdd:PRK05683 472 AQTADLQNAI-KNSTPVKLVFGAD-------SSGPQSYTLVDAKGNAI-GSGTIVPGQSNTLTLAVPMpdasgnPINDAT 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 550 YTYEFNLSNVPQTGDSFTLSFNKDGIADNRNALNLNALQTKPTVG-GTDSTGSTYNDAYGGLVERVGTLTAQARASADAS 628
Cdd:PRK05683 543 FTFEMTISGSPQAGDSFTVSFNGAGSSDNRNALALLGLQTKSTVGvGSGGKGTSLTDAYGKLVERVGTLASQARADATAT 622
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 15596283 629 QTVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLIGAF 682
Cdd:PRK05683 623 AAVLKQAKDSRDSLSGVSLDEEAANLIKFQQYYTASSQIIKAAQETFSTLINAL 676
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
1-683 |
1.80e-120 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 368.05 E-value: 1.80e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 1 MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATS 80
Cdd:COG1256 2 LFSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTGVRVTGIRRIRDEFLDAQLRSANS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 81 QNSELNAFLGQIDQLNSLLAD-NTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLIN 159
Cdd:COG1256 82 DLGYAEARADALSQLEALLGEpSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADAD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 160 QQLGALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGSGQPLVVGNTV 239
Cdd:COG1256 162 SQIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQDDGTVNVSTGNGQTLVDGDTA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 240 STLSVVPGLDDPTR-YQVQLTLGDSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLAGK 318
Cdd:COG1256 242 SELSFTPSAGDPGGlSTVTLDDSGVPSDATSSITGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNGN 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 319 AGANLFGDinDPDITALRVLAkngntgnvhanlnitdtsklnssdfrldfdgtnftarrlgddasmqvtvsgtgpytlsf 398
Cdd:COG1256 322 PGGDLFDI--DPSITGGTLTP----------------------------------------------------------- 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 399 kdangvdqgfsvtldqlpaagdrftlqPTRRGASDIettlknasqlafagsaraeattnnrgsgaigqpnlvdgpspidp 478
Cdd:COG1256 341 ---------------------------FDTVGAGNI-------------------------------------------- 349
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 479 avlqnafganglplsaTVSADgktytmtsplpagwsyVDKDGNALPGSPTLNSGTSnsvrmaytdpgsgqtytyefnlsn 558
Cdd:COG1256 350 ----------------SVNPA----------------VIGDPSLLAAANSDGGGAG------------------------ 373
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 559 vpqtgdsftlsfnkdgiaDNRNALNLNALQTKPTVGGTDSTGsTYNDAYGGLVERVGTLTAQARASADASQTVLKQAQDS 638
Cdd:COG1256 374 ------------------DNTNALALAALQDAKLVFDSGGSG-TLSDYYASLVSDLGVDAQQAKTEAEAQEALLDQLENQ 434
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 15596283 639 RDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLIGAFR 683
Cdd:COG1256 435 RQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLNIVG 479
|
|
| flgK_ends |
TIGR02492 |
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ... |
3-319 |
1.49e-72 |
|
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274162 [Multi-domain] Cd Length: 323 Bit Score: 237.63 E-value: 1.49e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 3 DLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQN 82
Cdd:TIGR02492 1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAGGQGGKQIGTGVKVTSIRRIQDQFLDNQYRRANSSA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 83 SELNAFLGQIDQL-NSLLADNTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQQ 161
Cdd:TIGR02492 81 GYADSRASGLSKIeQIFNDLDGSGLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGINAE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 162 LGALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGSGQPLVVGNTVST 241
Cdd:TIGR02492 161 IKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVDGATVTG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 242 LSVVPGLDDPTR-----YQVQLTLGDSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLA 316
Cdd:TIGR02492 241 SSTSPLTADTTGgkvggDGVYLPSGSSKVTISSDLQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGADLT 320
|
...
gi 15596283 317 GKA 319
Cdd:TIGR02492 321 GSA 323
|
|
| Flg_bbr_C |
pfam06429 |
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ... |
618-679 |
3.14e-06 |
|
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.
Pssm-ID: 428939 [Multi-domain] Cd Length: 74 Bit Score: 45.33 E-value: 3.14e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15596283 618 TAQARASADASQTVLKQAQDSrdslSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLI 679
Cdd:pfam06429 15 DGAPILGAGADGRVQQGYLEG----SNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTAN 72
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| flgK |
PRK05683 |
flagellar hook-associated protein FlgK; Validated |
2-682 |
0e+00 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235558 [Multi-domain] Cd Length: 676 Bit Score: 923.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 2 SDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQ 81
Cdd:PRK05683 1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTVQTTKASQQSGAGYIGTGTTLADVRRIYNSFLDTQLRTATSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 82 NSELNAFLGQIDQLNSLLADNTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQQ 161
Cdd:PRK05683 81 NSDASAYLGQISQLDKLLSDSTTGISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQQNSNINSQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 162 LGALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNsVSLFIGSGQPLVVGNTVST 241
Cdd:PRK05683 161 LSAMTDQVNNLTTSIASYNKQIAQASASGATPNDLLDARDEAVRQLNELVGVTVVERDGN-YDVYIGSGQPLVVGNTANT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 242 LSVVPGLDDPTRYQVQLTLGDSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLAGKAGA 321
Cdd:PRK05683 240 LSVVPGPSDPSRYNVQLNRGSSTQDVTSVVSGGEIGGLLRYRSDVLDPAMNELGRLALVVADQINSQLGQGIDLNGNFGS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 322 NLFGDINDPDITALRVLAKNGNT-GNVHANLNITDTSKLNSSDFRLDFDG-TNFTARRLGDDASMqvtvsgtGPYTLSFK 399
Cdd:PRK05683 320 SLFGDINSADAISQRSLAKNGNSaGSGNLNVTIKDTSKLTTSDYEVTFTSaTNYTVRRLSDGTDM-------GSFDLSDN 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 400 DANGVDqGFSVTLD-QLPAAGDRFTLQPTRRGASDIETTLKNASQLAFAGSARAEATTNNRGSGAIGQPNL---VDGPSP 475
Cdd:PRK05683 393 PAPVID-GFSLSLNgGTLAAGDSFKVTPTRNAASDIETVLTDPKKLAFAAPLTAEAGSGNSGTGSITQPTLtskLDIYDP 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 476 IDPAVLQNAFgANGLPLSATVSADgktytmtSPLPAGWSYVDKDGNALpGSPTLNSGTSNSVRMAYTD------PGSGQT 549
Cdd:PRK05683 472 AQTADLQNAI-KNSTPVKLVFGAD-------SSGPQSYTLVDAKGNAI-GSGTIVPGQSNTLTLAVPMpdasgnPINDAT 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 550 YTYEFNLSNVPQTGDSFTLSFNKDGIADNRNALNLNALQTKPTVG-GTDSTGSTYNDAYGGLVERVGTLTAQARASADAS 628
Cdd:PRK05683 543 FTFEMTISGSPQAGDSFTVSFNGAGSSDNRNALALLGLQTKSTVGvGSGGKGTSLTDAYGKLVERVGTLASQARADATAT 622
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 15596283 629 QTVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLIGAF 682
Cdd:PRK05683 623 AAVLKQAKDSRDSLSGVSLDEEAANLIKFQQYYTASSQIIKAAQETFSTLINAL 676
|
|
| flgK |
PRK06945 |
flagellar hook-associated protein FlgK; Validated |
1-682 |
4.27e-173 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235895 [Multi-domain] Cd Length: 651 Bit Score: 509.17 E-value: 4.27e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 1 MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATS 80
Cdd:PRK06945 1 SSSLLNIGLSGLNAAQWGLTTTGHNISNAATPGYSRQRVVQAEAGGQYTGSGYLGQGVNVVTVKRQYSQYLSAQLNNAQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 81 QNSELNAFLGQIDQLNSLLADNTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQ 160
Cdd:PRK06945 81 ASSSLSTYYSQISQLNNYLADPTAGLSPAITSFFTGLQNVANNPSDPSARQTMLSNAQTLASQFNAAGQQLDQLRQSVNT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 161 QLGALTSQVNNLSQSVAEYNDAIAKAKSA-GAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGSGQPLVVGNTV 239
Cdd:PRK06945 161 QLTSSVTQINSYTKQIAQLNDQIAKAESSqGQPPNDLLDQRDQLVSELSKLVGVTVVQQDDGGYNVFVGNGQPLVVGNQS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 240 STLSVVPGLDDPTRYQVQLTL--GDSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLAG 317
Cdd:PRK06945 241 YQLTTVPSPSDPSRLTVAGYKppGTTQELPDSSLTGGTLGGLLAFRSQTLDPAQNQLGRLAASLAAQFNAQNALGIDLNG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 318 KAGANLFgdindpDITALRVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRLGDDASMQVTVSGTGPYTLS 397
Cdd:PRK06945 321 NLGGDLF------SVAGPTVYANANNTGSATLTASITNASALTTSDYTLSYDGTNYTLTRLSDGSVVGTATSLPTPPPTT 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 398 FkdangvdQGFSVTLDQLPAAGDRFTLQPTRRGASDIETTLKNASQLAFAGSARAEATTNNRGSGAIGQPNlVDGPSPID 477
Cdd:PRK06945 395 I-------DGLSLSLSGTMNAGDSFLVQPTRNAANGFSVATTDGSAIAAASPVRASAGSTNTGTGAISQGS-VSSGYPLP 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 478 PAVLQNAFGA-----NGLPLSATVSADGKTYTMTSPLPAGwsyvdkdgnalpGSPTLNSGTSNSVRMAytdpgsgqtyTY 552
Cdd:PRK06945 467 SGTTTLTYDAatgtlSGFPAGTTVTVAGTPPTSVTITPAT------------TPVPYTSGAGISLVFN----------GV 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 553 EFNLSNVPQTGDSFTLSFNKDGIADNRNALNLNALQTKPTVGGtdsTGSTYNDAYGGLVERVGTLTAQARASADASQTVL 632
Cdd:PRK06945 525 SVTLSGTPADGDTFTIGPNTGGTNDGRNALALAKLQNAKTLDG---GTATYTGAYAQLVNQVGNKASQLKVSSAAQTALL 601
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 15596283 633 KQAQDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLIGAF 682
Cdd:PRK06945 602 GQITAAQQSVSGVNLDEEAANLLRYQQAYQANAKVIQTASTLFDTLLGIF 651
|
|
| flgK |
PRK08147 |
flagellar hook-associated protein FlgK; Validated |
1-681 |
2.31e-124 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236165 [Multi-domain] Cd Length: 547 Bit Score: 380.18 E-value: 2.31e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 1 MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATS 80
Cdd:PRK08147 1 MSSLINTAMSGLNAAQAALNTVSNNISNYNVAGYTRQTTILAQAGSTLTAGGWIGNGVYVSGVQREYDAFITNQLRAAQT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 81 QNSELNAFLGQIDQLNSLLADNTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQ 160
Cdd:PRK08147 81 QSSGLTTRYEQMSKIDNLLSDSTNSLSTTMQDFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKGVNT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 161 QLGALTSQVNNLSQSVAEYNDAIAKA--KSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGSGQPLVVGNT 238
Cdd:PRK08147 161 AIGSSVDQINNYAKQIASLNDQITRLtgVGAGASPNDLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 239 VSTLSVVPGLDDPTRyqvqLTLG---DSTQNVT---RLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQG 312
Cdd:PRK08147 241 AYQLAAVPSSADPTR----TTVAyvdGTAGNIEipeKLLTTGSLGGLLTFRSQDLDQTRNQLGQLALAFADAFNTQHKAG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 313 LDLAGKAGANLFGdINDPDitalrVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRLGDDASMQVTVSGTG 392
Cdd:PRK08147 317 FDANGDAGEDFFS-IGKPA-----VLSNSKNTGTASLTAEYTDASAVKATDYKISFDGTNWQVTRLSDNTTFTVTPDANG 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 393 PyTLSFkdangvdQGFSVTLDQLPAAGDRFTLQPTRRGASDIETTLKNASQLAFAGSARAeattnnrgsgaigqpnlvdg 472
Cdd:PRK08147 391 K-TLEF-------DGLKVTVTGTPAANDSFTLKPVSDAIVNMDVLITDESKIAMASEADG-------------------- 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 473 pspidpavlqnafganglplsatvsadgktytmtsplpagwsyvdkdgnalpgsptlnsgtsnsvrmaytdpgsgqtyty 552
Cdd:PRK08147 --------------------------------------------------------------------------------
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 553 efnlsnvpqtgdsftlsfnkdGIADNRNALNLNALQTKPTVGGTdstgSTYNDAYGGLVERVGTLTAQARASADASQTVL 632
Cdd:PRK08147 443 ---------------------GDSDNRNGQALLDLQNKKLVGGK----KSFNDAYASLVSDVGNQTATLKTSSTTQANVV 497
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 15596283 633 KQAQDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLIGA 681
Cdd:PRK08147 498 TQLTNQQQSVSGVNLDEEYGNLQRFQQYYLANAQVLQTASTLFDALLNI 546
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
1-683 |
1.80e-120 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 368.05 E-value: 1.80e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 1 MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATS 80
Cdd:COG1256 2 LFSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTGVRVTGIRRIRDEFLDAQLRSANS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 81 QNSELNAFLGQIDQLNSLLAD-NTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLIN 159
Cdd:COG1256 82 DLGYAEARADALSQLEALLGEpSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADAD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 160 QQLGALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGSGQPLVVGNTV 239
Cdd:COG1256 162 SQIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQDDGTVNVSTGNGQTLVDGDTA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 240 STLSVVPGLDDPTR-YQVQLTLGDSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLAGK 318
Cdd:COG1256 242 SELSFTPSAGDPGGlSTVTLDDSGVPSDATSSITGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNGN 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 319 AGANLFGDinDPDITALRVLAkngntgnvhanlnitdtsklnssdfrldfdgtnftarrlgddasmqvtvsgtgpytlsf 398
Cdd:COG1256 322 PGGDLFDI--DPSITGGTLTP----------------------------------------------------------- 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 399 kdangvdqgfsvtldqlpaagdrftlqPTRRGASDIettlknasqlafagsaraeattnnrgsgaigqpnlvdgpspidp 478
Cdd:COG1256 341 ---------------------------FDTVGAGNI-------------------------------------------- 349
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 479 avlqnafganglplsaTVSADgktytmtsplpagwsyVDKDGNALPGSPTLNSGTSnsvrmaytdpgsgqtytyefnlsn 558
Cdd:COG1256 350 ----------------SVNPA----------------VIGDPSLLAAANSDGGGAG------------------------ 373
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 559 vpqtgdsftlsfnkdgiaDNRNALNLNALQTKPTVGGTDSTGsTYNDAYGGLVERVGTLTAQARASADASQTVLKQAQDS 638
Cdd:COG1256 374 ------------------DNTNALALAALQDAKLVFDSGGSG-TLSDYYASLVSDLGVDAQQAKTEAEAQEALLDQLENQ 434
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 15596283 639 RDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLIGAFR 683
Cdd:COG1256 435 RQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLNIVG 479
|
|
| flgK |
PRK12714 |
flagellar hook-associated protein FlgK; Provisional |
2-683 |
1.27e-99 |
|
flagellar hook-associated protein FlgK; Provisional
Pssm-ID: 183697 [Multi-domain] Cd Length: 624 Bit Score: 318.43 E-value: 1.27e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 2 SDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQ 81
Cdd:PRK12714 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKITDVGRVADQLAISRLLDSGGE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 82 NSELNAFLGQIDQLNSLLADNTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQQ 161
Cdd:PRK12714 81 LSRLQQLSSLSNRVDALYSNTATNVAGLWSNFFDSTSALSSNASSTAERQSMLDSGNSLATRFKQLNGQMDSLSNEVNSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 162 LGALTSQVNNLSQSVAEYNDAIAkAKSAGAVPnDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGSGQPLVVGNTVST 241
Cdd:PRK12714 161 LTSSVDEVNRLTQQIAKINGTIG-SSAQNAAP-DLLDQRDALVSKLVGYTGGTAVIQDGGFMNVFTAGGQALVVGTTASK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 242 LSVVPGLDDPTRYQVQLTLGDSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLAGKAGA 321
Cdd:PRK12714 239 LTTVADPYQPTKLQVAMQTQGQNVSLSPSSLGGQIGGLLEFRSSVLEPTQAELGRLAVGMASSFNAGHSQGMDLYGAMGG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 322 NLFgdindpDITALRVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRLGDDASMQVTVSGTGPYTLsfkda 401
Cdd:PRK12714 319 NFF------NIGSPTVAANPSNTGTASLSASFSNLSAVDGQNVTLSFDGTNWKATRADTGSAVPMTGTGTAADPL----- 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 402 ngVDQGFSVTLDQLPAAGDRFTLQPTRRGASDIETTLKNASQLAFAGSARAEATTNNRGSGAIGQPNLVDGPSPidpavl 481
Cdd:PRK12714 388 --VLNGVSMVVGGTPASGDKFLLQPTAGLAGSLSVAITDPSRIAAATPVKATATLANQGTGKISDVKVTNAQNP------ 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 482 qnafgaNGLPLSATVSADGKTYTMTSPLPagwsyvdkdgnalpgsptlnsgtsnsvrMAYTdpgSGQTYT---YEFNLSN 558
Cdd:PRK12714 460 ------ALLTPSSIEFIDANQYTIDGAGP----------------------------FAYT---AGQTISangWSFALDG 502
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 559 VPQTGDSFTLSFNKDGIADNRNALNLNALQ-TKPTVGGTdstgSTYNDAYGGLVERVGTLTAQARASADASQTVLKQAQD 637
Cdd:PRK12714 503 APKAGDTFGVGPTGAGSSDNGNAKLLAKVDdAKALNGGT----VTLNGALSGLTTSVGSAARAANYSADAQKVINDQAQA 578
|
650 660 670 680
....*....|....*....|....*....|....*....|....*.
gi 15596283 638 SRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLIGAFR 683
Cdd:PRK12714 579 SRDSISGVNLDEEAANMLKLQQAYQAAAQMISTADTMFQAILGAVR 624
|
|
| flgK |
PRK08871 |
flagellar hook-associated protein FlgK; Validated |
2-679 |
2.29e-86 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 181572 [Multi-domain] Cd Length: 626 Bit Score: 283.66 E-value: 2.29e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 2 SDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIP-QFSGAGYmGSGSQIVDVRRLASDFLTGQLRNATS 80
Cdd:PRK08871 3 SDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNDPrQFGGSTY-GMGVHVENVRRSWDQFAVNELNLSTT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 81 QNSELNAFLGQIDQLNSLLADNTTGVSPA-MQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLIN 159
Cdd:PRK08871 82 NLANKTDTEANLDMLSSMLSSVASKKIPEnLNEWFDAVKTLADSPNDLGARKVVLEKAKLISQTLNDFHETVRQQKDVTN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 160 QQLGALTSQVNNLSQSVAEYNDAIAKAKSAGavpNDLLDARDEAVRKLSEMVGVTaVTQDDN--SVSLFIGSGQPLVVGN 237
Cdd:PRK08871 162 KKLDLGVERINQIALEIRDIHRLMMRTPGPH---NDLMDQHEKLVKELSQYTKVT-VTPRKNaeGFNVHIGNGHTLVSGT 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 238 TVSTLSVVPGLDDPTRYQVQLTLGDSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLAG 317
Cdd:PRK08871 238 EASQLKMIDGYPDPHQRRLAMVEGKGLKAIKADDIGGKLGALLDMRDEHIPYLMDELGRLATGFSSEVNTLQSQGLDLRG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 318 KAGANLFGDINDPDITALRVLAKNGNTGNVhaNLNITDTSKLNSSDFRLDFDGTNFTARRlgDDASMQVTVSGTGPYTLS 397
Cdd:PRK08871 318 NVGGNLFTDVNSEVIARSRVVTAPNSKADV--AVFIDDISQLKGGEYALRYDGSQYTVTK--PSGEQQSLDPDGNPSAFY 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 398 fkdangVDqGFSVTLDQLPAAGDRFTLQPTRRGASDIETTLKNASQLAfAGSARAEATTnnrgsgAIGQPNLvdgpspid 477
Cdd:PRK08871 394 ------LD-GMRVEVRNPPQAGERILLRPTRNGAAQIKLETNDAKKIA-AQSYEASTTF------AQGKAKF-------- 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 478 pavlqNAFGANGL-PLSATVSADGKTYTMTsplpagwsyvDKDGNAL-------PGSPTLNSGTSnsvrmaytdpgsgqt 549
Cdd:PRK08871 452 -----KILQAGDLrEFEVIVSPTGDQFAVT----------DTKGNILlqpqpypPKGPVTVGGTT--------------- 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 550 ytyeFNLSNVPQTGDSFTLSFN-KDGiaDNRNALNLNALQTKPTVggtDSTGSTYNDAYGGLVERVGTLTAQARASADAS 628
Cdd:PRK08871 502 ----FELTEGALANDKFTANLVpSEG--DNGNLRKMQNLQTDKVM---DDGESTIIDLYHNLNTEVGLKKATATRLADVA 572
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 15596283 629 QTVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLI 679
Cdd:PRK08871 573 RLEKEAAQSRVASISGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 623
|
|
| flgK |
PRK12715 |
flagellar hook-associated protein FlgK; Provisional |
4-683 |
1.11e-79 |
|
flagellar hook-associated protein FlgK; Provisional
Pssm-ID: 183698 [Multi-domain] Cd Length: 649 Bit Score: 266.60 E-value: 1.11e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 4 LLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQdAIQQTRIPQFSGAG-YMGSGSQIVDVRRLASDFLTGQLRNATSQN 82
Cdd:PRK12715 3 ILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQ-SIQFTPIASNRYAGsYIGAGVSVSSIYRNVDQFANAQVRSTLSYR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 83 SELNAFLGQIDQLNSLLADNTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQQL 162
Cdd:PRK12715 82 TQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQLNSTPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNSTLQV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 163 GALTSQVNNLSQSVAEYNdaiAKAKSAGAVPnDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGSGQPLVVGNTVSTL 242
Cdd:PRK12715 162 TESVKIINRITKELAEVN---GKLLGNNNIP-ELLDHRDELLKQLSGYTDLSIFDQGDGTISVGIASGDMLVAGTQQRDL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 243 SVVPGLDDPTRYQVQLTLGDSTQ-NVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLAGKAGA 321
Cdd:PRK12715 238 VVGTGKDSIFGTKIFLSSGGNNQvDITDRLTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQTFNAQHKLGMDMNSQIGK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 322 NLFGDINDPDITALRVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRL---GDDASMQVTVSGTGPYTLSf 398
Cdd:PRK12715 318 DFFTDFNSPGQMLKRSTASADNSGTAVLSVNISDISQVKLSDYDLIISDTGANELRLirkSDGTSTTLTWSSSPPAPPA- 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 399 kdANGVDQGFSVTLDQLP--AAGDRFTLQPTRRGASDIETTLKNASQLAFAGSARAEATTNNRGSGAIgqpnlVDGPspi 476
Cdd:PRK12715 397 --GQVVIDGMTITVNDLSqlANNDHYTLTPTRGAARDFALEIKDAYEIALASPVKTTASLNNTGQGQI-----ILGP--- 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 477 dpaVLQNAfganglplsatvsADGKTYTMTSPLPAGWSYVDKDGNALPGSPTLNSGTSNSVRMAytdpgSGQTYTYEFNL 556
Cdd:PRK12715 467 ---VLNTA-------------SVNKQFRIDFISDTQYNLVNVTDSTTAGPFAFVPNTNNVIQIP-----DGITPSYSVVL 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 557 SNVPQTGDSFTLSFNKDGIADNRNALNLNALQTKPTVggtdSTGS-TYNDAYGGLVERVGTLTAQARASADASQTVLKQA 635
Cdd:PRK12715 526 SGIPKSGDQFTTDYNTGGFGDNRNGLILGNIQQNKIF----SNGSeTLFDRYGSLLAEVGGRTNQAKTSFESADILHKQA 601
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 15596283 636 QDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLIGAFR 683
Cdd:PRK12715 602 LDFQDSKSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFDIMR 649
|
|
| flgK_ends |
TIGR02492 |
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ... |
3-319 |
1.49e-72 |
|
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274162 [Multi-domain] Cd Length: 323 Bit Score: 237.63 E-value: 1.49e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 3 DLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQN 82
Cdd:TIGR02492 1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAGGQGGKQIGTGVKVTSIRRIQDQFLDNQYRRANSSA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 83 SELNAFLGQIDQL-NSLLADNTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQQ 161
Cdd:TIGR02492 81 GYADSRASGLSKIeQIFNDLDGSGLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGINAE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 162 LGALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGSGQPLVVGNTVST 241
Cdd:TIGR02492 161 IKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVDGATVTG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 242 LSVVPGLDDPTR-----YQVQLTLGDSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLA 316
Cdd:TIGR02492 241 SSTSPLTADTTGgkvggDGVYLPSGSSKVTISSDLQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGADLT 320
|
...
gi 15596283 317 GKA 319
Cdd:TIGR02492 321 GSA 323
|
|
| flgK |
PRK06665 |
flagellar hook-associated protein FlgK; Validated |
5-679 |
1.58e-62 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180650 [Multi-domain] Cd Length: 627 Bit Score: 219.54 E-value: 1.58e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 5 LSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIP----QFSGA---GYMGSGSQIVDVRRLASDFLTGQLRN 77
Cdd:PRK06665 8 IEIGKRSLFAHKQALQTTGHNISNASTKGYSRQRVTMKTFDPlyapSLNRAekpGQIGQGVEIQSIERIRDELLDSRIIE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 78 ATSQN---SELNAFLGQIDQLNSLLADntTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQ 154
Cdd:PRK06665 88 ESGRLgywKTKDKYLSQLEQVYNEPED--QSLRTRLDDFWDSWQDLSNYPEGLAERQVVLERAQSLGERIHDRYRSLERI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 155 NSLINQQLGALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGsGQPLV 234
Cdd:PRK06665 166 RDMANDEIEITVEEINNILRNIADLNEQIVKSQAMGDNPNDLLDRRDLLVDKLSSLIDVSIERSDPDEFMIHIG-GRHLV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 235 VGNTVSTLSVVPGLDDPTRYQVQLtlgdSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLD 314
Cdd:PRK06665 245 QGNIANELDLEANPPNEGYWDILW----SANGDPALLRTGKLGALIELRDTDIRDEINELDTLAINIVDLVNEIHRSGFG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 315 LAGKAGANLFgdindpditalrvlakngntgnvhanlniTDTSKLNSSDFRLDF--DGTNftarrlgdDASMQVTVSGTg 392
Cdd:PRK06665 321 LNGKTGRDFF-----------------------------TQEYKLTNTRGNYDSngDGQF--------DSTHIFRVNGT- 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 393 pytlsfkdaNGVDQ----GFSVTLdqlpaagdrfTLQPTRRGAS---DIETTLKNASQLAFAGSARAEATT--NNRGSGA 463
Cdd:PRK06665 363 ---------NSIDPdekiGISGTL----------RFQASNKNGTveiPYNATDTVNDVIKRINNSNAQVTAylNHNNKLV 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 464 IGQPNLVDGPSPI-------DP-------AVLQNAFGANG------LPLSATVSADGKTYTMTsPL--PAGWSYVDKDGN 521
Cdd:PRK06665 424 LKATKADDDENPDfvirhieDSgdflvgyTGILNASGPEGaydyqrIDTINKLQGNGADYTVS-PLkhPASWIKVNDIIR 502
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 522 ALPgsptlnsgtsNSVRMAYTDPGsgqtytyefnlsnvpqtgdsftlsfNKDGIADNRNALNLNALQTKPTVGGTDstgS 601
Cdd:PRK06665 503 NDP----------SNIAAGIGDPT-------------------------NPNGIGDGRAALAIASLRNSPVMVGKS---K 544
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15596283 602 TYNDAYGGLVERVGTLTAQARASADASQTVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLI 679
Cdd:PRK06665 545 TFDDFFANTISNIGIKGETAEIEKESQNQIMKELEDLRQSVSGVNLDEELANMIEFQHGYNASARFISVSNELLDTII 622
|
|
| flgK |
PRK07191 |
flagellar hook-associated protein FlgK; Validated |
4-324 |
1.67e-57 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180871 [Multi-domain] Cd Length: 456 Bit Score: 201.59 E-value: 1.67e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 4 LLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQNS 83
Cdd:PRK07191 3 FIRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWQANSQQG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 84 ELNAFLGQIDQLNSLLADNTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQQLG 163
Cdd:PRK07191 83 YYDAGEQYFNALELVVGNKSTSLATGLNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQKKSIGQQRD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 164 ALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGSGQPLVVGNTVSTLS 243
Cdd:PRK07191 163 ATVKQINSLTRSIADYNQKILKNRSDGNNISDLLDQRDLQIKKLSGLIEVRVVQQEDGTYRVSVKNGQPLVNGAVAAELA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 244 VvpGLDDPTRYQVQLTLGDSTQNVtRLVSGGQMGGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLAGKAGANL 323
Cdd:PRK07191 243 V--DTSSVGTQKLTLHFSGATQGM-NMSCGGQLGGLNDYELTTLKPLQDSTQEMAKTVADKFNDQLTKGFDMNGAPGKPL 319
|
.
gi 15596283 324 F 324
Cdd:PRK07191 320 F 320
|
|
| flgK |
PRK07739 |
flagellar hook-associated protein FlgK; Validated |
5-334 |
2.19e-45 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236084 [Multi-domain] Cd Length: 507 Bit Score: 169.43 E-value: 2.19e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 5 LSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQdAIQQTRIPQFS--------GAGYMGSGSQIVDVRRLASDFLTGQLR 76
Cdd:PRK07739 8 LETARRGLFAQQAALYVTGHNIANANTPGYTRQ-RVNLAATPPYPtpgmnrpkIPGQMGTGVEAGSVERIRDQFLDIQYR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 77 NATSQNSELNA---FLGQI-DQLNSLladNTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLD 152
Cdd:PRK07739 87 RENNKLGYWETkadALSQMeDIMNEP---SDTGLNKVLDQFWNSLQELSKNPENLGARSVVRQRAQALAETFNYLSQSLT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 153 KQNSLINQQLGALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTaVTQD----------DNS 222
Cdd:PRK07739 164 DIQNDLKSEIDVTVKEINSLASQISDLNKQIAKVEPNGYLPNDLYDQRDLLLDELSKIVNIT-VEYNksggnaledaEGT 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 223 VSLFIGSG---QPLVVGN--TVSTLSV----VPGLDDPTRYQVQlTLGDSTQNVTRLVSGGQMGGLLAYRDTVLDSSYNK 293
Cdd:PRK07739 243 FRIDILGGngkGTLVDGKdsTVNELSVnkddVTGLVTDLSLGGT-TVSWDDTGQPVNPSSGKLKGLLEMYGYMSGNGEEK 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 15596283 294 ---------LGQLALTFADTVNKQLGQGLDLAGKAGANLFGDINDPDITA 334
Cdd:PRK07739 322 glypemlndLDKLAYTFATAFNEVHKQGYGLNGSTGIDFFDGTGDSTKGA 371
|
|
| flgK |
PRK07521 |
flagellar hook-associated protein FlgK; Validated |
5-286 |
7.57e-33 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236038 [Multi-domain] Cd Length: 483 Bit Score: 132.75 E-value: 7.57e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 5 LSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRipqfsgagymGSGSQIVDVRRLASDFLTGQLRNATSQNSE 84
Cdd:PRK07521 7 LNTAQSGLTATSRQTSVVSRNIANAGTPGYSRREASLVSG----------PAGGQVVGISRAQDPALLAQRLLATSAAAA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 85 LNAFLGQIDQLNSLLADNTTGVSPA--MQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQQL 162
Cdd:PRK07521 77 QDTLADGLERLASTVGDNDYEGSPSarLSDFQAALQTAASSPDNTTLAQAAVDAAQDLANSLNDASDAVQSARADADAEI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 163 GALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLFIGSGQPLVVGNT---- 238
Cdd:PRK07521 157 ADSVDTLNDLLAQFEDANNAVVSGTATGRDASDALDQRDKLLKQISQIVGVTTVTRDNNDMALYTDGGVTLFETTPrtvt 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 15596283 239 -VSTLSVVPGLDDPTRY--QVQLTLGDSTQnvtrLVSGGQMGGLLAYRDTV 286
Cdd:PRK07521 237 fTPTATYTAGTTGNAVYidGVPLTGGSGVM----PLAGGSLAALLQLRDEI 283
|
|
| flgK |
PRK08471 |
flagellar hook-associated protein FlgK; Validated |
5-680 |
2.01e-25 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236270 [Multi-domain] Cd Length: 613 Bit Score: 111.29 E-value: 2.01e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 5 LSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQNsE 84
Cdd:PRK08471 8 LNTGYTGLQAAQVMVDTTGNNISNASSEFYTRQRVVQSAQAALNTGGGNVGTGTDIETIVRIHDEFVYSRYKKASTEL-E 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 85 LNAFLGQIDQ-LNSLLAD-NTTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQQL 162
Cdd:PRK08471 87 YTDYEFSTLQeASQYFPDlDDTGILKDLQDYFNAWNDFASNPKDSAQKQALAQKTETLTNNIKDTRERLDTLQKKVNEEL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 163 GALTSQVNNLSQSVAEYNDAI--AKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQDDNSVSLF-------------- 226
Cdd:PRK08471 167 KVTVDEINSLGKQIAEINKQIkeVEAGKTLKHANELRDKRDELELTLSKLVGANVFKSSIKSDSRLdttsadfgesynln 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 227 IGsGQPLVVGNTVSTLSVVPGLDDPTRYQVQLTLGDSTQ-NVTRLVSGGQMGGLLAYRDTVLDSSYNK------------ 293
Cdd:PRK08471 247 IG-GFNIVDGSNFHPLVLDEDENKGGFNQIYYESDDFKRiDITDKISGGKVGALLDLRGRNYDGGSGGtldgkiqdyidn 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 294 LGQLALTFADTVNKQLGQGLDLAgkaganlfgdINDPDITAlrvlakNGNTGNVHANLNITDTSklnssdFRL---DFDG 370
Cdd:PRK08471 326 LDTFAKTLIESTNNIYAQSATES----------IESDPLSL------KSDEALVDTNYNIQNGS------FDLvvyDTDG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 371 tNFTARRlgddaSMQVTVSGTGPYTLSFKDANGVDQGFSVTLDQLpaaGDRFTlqptrrgasdiettlknasqlafagsa 450
Cdd:PRK08471 384 -KEVARK-----TINIDVITTMNDIVQQINANTDDNNDNNANNDV---DDYFT--------------------------- 427
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 451 raeATTNNRGSGAIGQpnlvdgpspidpavlqnafgangLPLSATVSADGktYTMtsplpagwSYVDKdGNALPGSPTLN 530
Cdd:PRK08471 428 ---ASFNNDTKTGDGL-----------------------FQIQPKNASQG--YTV--------SIEDK-GTNFPGALGLN 470
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 531 ---SGTSNS---VRMAYTDpgsgqtytyefnlsnvpqtgDSFTLSFNKDGI-ADNRNALNLNALQTKPT---VGGTDSTG 600
Cdd:PRK08471 471 rffDGDDASnisLNSSYKK--------------------DPTTIRAWLAPVdGNNDVANKMQQLQYDKVnfyNNKGTIKN 530
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 601 STYNDAYGGLVERVGTLTAQARASADASQTVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLIG 680
Cdd:PRK08471 531 MTIEEYYRFLTTKIASDTEKNNRINDTNKALLNSVKKEYQSISGVSTDEELVNLIKFQSSYGAAAKIITTIDQMLDTLLG 610
|
|
| flgK |
PRK06799 |
flagellar hook-associated protein FlgK; Validated |
9-221 |
1.34e-19 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180699 [Multi-domain] Cd Length: 431 Bit Score: 91.87 E-value: 1.34e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 9 LSGLGTSQTWLTVTGHNITNVKTPGYSRQdAIQQTRIPQ---FSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQNSEL 85
Cdd:PRK06799 10 LSGMLAAQMGLQTTQQNLSNIHTPGYVRQ-MVNYGSVGAsggLLPEQQIGYGVQTLGVDRITDEVKTKQYNDQLSQLSYY 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 86 NAFLGQIDQLNSLLAdnTTG---VSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQQL 162
Cdd:PRK06799 89 NYMNSALSRVESMVG--TTGknsLSSLMDGFFNAFREVAKNPEQANYYDTLISETGKFTSQLNRLAKGLDELEAQTTEDI 166
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 15596283 163 GALTSQVNNLSQSVAEYNDAIAKAKSagAVPNDLLDARDEAVRKLSEMVGVTAVTQDDN 221
Cdd:PRK06799 167 EAHVNEFNRLAKSLAEANKKIGQAGT--QVPNQLLDERDRILTEMSKYANIEVSYESMN 223
|
|
| flgK |
PRK06799 |
flagellar hook-associated protein FlgK; Validated |
600-679 |
1.90e-07 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180699 [Multi-domain] Cd Length: 431 Bit Score: 54.12 E-value: 1.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 600 GSTYNDAYGGLVERVGTLTAQARASADASQTVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLI 679
Cdd:PRK06799 349 GLSYKQALDQFIVGVASDKSAVNAYQKIHTDLLEGIQQEKMSLEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLF 428
|
|
| Flg_bbr_C |
pfam06429 |
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ... |
618-679 |
3.14e-06 |
|
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.
Pssm-ID: 428939 [Multi-domain] Cd Length: 74 Bit Score: 45.33 E-value: 3.14e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15596283 618 TAQARASADASQTVLKQAQDSrdslSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLI 679
Cdd:pfam06429 15 DGAPILGAGADGRVQQGYLEG----SNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTAN 72
|
|
| FlgG |
COG4786 |
Flagellar basal body rod protein FlgG [Cell motility]; |
5-77 |
2.39e-04 |
|
Flagellar basal body rod protein FlgG [Cell motility];
Pssm-ID: 443816 [Multi-domain] Cd Length: 260 Bit Score: 43.26 E-value: 2.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 5 LSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDA---------IQQTRIPQFSGAGY-----MGSGSQIVDVRRlasDF 70
Cdd:COG4786 1 LYTAASGMLAQQTRLDVISNNLANVNTTGFKRDRAvfedllyqlIRRPGAPSSQGTQTpvglqLGTGVRVAATQT---DF 77
|
....*..
gi 15596283 71 LTGQLRN 77
Cdd:COG4786 78 TQGSLQQ 84
|
|
| FlgEFG_subfam |
TIGR03506 |
flagellar hook-basal body protein; This model encompasses three closely related flagellar ... |
3-65 |
3.39e-04 |
|
flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.
Pssm-ID: 274616 [Multi-domain] Cd Length: 231 Bit Score: 42.62 E-value: 3.39e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15596283 3 DLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRI-PQFSGAGYMGSGSQIVDVRR 65
Cdd:TIGR03506 1 MALYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQDLLsQSVSGSGQVGGGVRTSGVAT 64
|
|
| FlgE |
COG1749 |
Flagellar hook protein FlgE [Cell motility]; |
5-64 |
9.70e-04 |
|
Flagellar hook protein FlgE [Cell motility];
Pssm-ID: 441355 [Multi-domain] Cd Length: 414 Bit Score: 42.08 E-value: 9.70e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15596283 5 LSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQ---FSGAGYMGSGSQIVDVR 64
Cdd:COG1749 5 FNTGVSGLNAASTALDVIGNNIANSNTVGFKSSRAEFADLVAQslsGANPTQVGGGVRVASVA 67
|
|
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
76-441 |
2.02e-03 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 41.05 E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 76 RNATSQ--NSELNAFLGQIDQLNSLLADNTTGVSpamqrffsaLQTAAQNPSSTeareavlAQAQGLSKTfNTLYDQLDK 153
Cdd:PRK08870 2 RISTAQmyQQSVNSMLDQQSQLSQLQQQLSSGKK---------LLTPSDDPVAA-------AQAVNLSQQ-SALLDQYTK 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 154 QNSLINQQLGALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVtAVTQDdnsvslfiGSGQPL 233
Cdd:PRK08870 65 NINLARNRLQQEESTLGSVEDLLQRARELVVQAGNGSLSDSDRQAIATELQGLRDQLLNL-ANSKD--------GSGNYL 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 234 VVGNTVSTLSVVPGLDDPTRYQvqltlGDSTQNVTRLVSGGQMGgllayrdtvldssynklgqlaltfadtvnkqlgqgl 313
Cdd:PRK08870 136 FAGTQSGTQPFAFDASGNVVYS-----GDQGQRQVQVADSVQVA------------------------------------ 174
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 314 dlAGKAGANLFGDINDPDITA-LRVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRLGDDASMQVTVSGTG 392
Cdd:PRK08870 175 --TNDPGDEVFMSVPNGGGDYvPNANASNTGTGLLGSASITDPSDPVNGDTYTITFTDNGAGGTNTYVTDSSTGTVVTAQ 252
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 15596283 393 PYTlsfkDANGVD-QGFSVTLDQLPAAGDRFTLQPtrRGASDIETTLKNA 441
Cdd:PRK08870 253 AYD----AGQPINfNGVEVQISGAPAAGDSFTLTP--APQASIFDTLDDA 296
|
|
| flgC |
PRK12632 |
flagellar basal body rod protein FlgC; Provisional |
1-67 |
8.74e-03 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183637 [Multi-domain] Cd Length: 130 Bit Score: 37.09 E-value: 8.74e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596283 1 MSDL---LSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQIVDVRRLA 67
Cdd:PRK12632 1 MTDFsksLSVSASGMRAQALRLRHVSENIANADTPGYRRKTVSFQEARDFDPGSGLVSTGPVRLDRSELP 70
|
|
| |
