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Conserved domains on  [gi|15241762|ref|NP_201031|]
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microtubule-associated protein 65-9 [Arabidopsis thaliana]

Protein Classification

coiled-coil domain-containing protein( domain architecture ID 706733)

coiled-coil domain-containing protein contains a region with alpha-helical coiled-coil sequence signatures that is being annotated by a variety of protein family models, not necessarily indicating family membership

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MAP65_ASE1 super family cl27203
Microtubule associated protein (MAP65/ASE1 family);
13-469 3.12e-69

Microtubule associated protein (MAP65/ASE1 family);


The actual alignment was detected with superfamily member pfam03999:

Pssm-ID: 427641 [Multi-domain]  Cd Length: 477  Bit Score: 230.27  E-value: 3.12e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762    13 LLQELEIIWKEVGETETEREKILIEIEEECREVYNRKIEKVKEEKIRIKQEIADSEARVIDICSVMEEPPILGRHHQSDQ 92
Cdd:pfam03999   3 LLDHLHVIWQEIGFSEDKRLQILSRLKDHIKEFYTDALSEENDKEQRILQSIADLRAEAAILCLYMRNRLLHEERDPFEP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762    93 QsgNGRSLKDELVKILQKLEEMEKRKSERKIQFIQVIDDIRCVREEINGESDDEtcssdfsADESDLSLRKLEELHRELY 172
Cdd:pfam03999  83 K--KGMSLLQKEKKLDTQLEHLRKEKAPRLAEIKELLEQLQQLCEELGEEPLPL-------LIDPLPSLEELESFRKHLE 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762   173 TLQEQKRNRVKQIQDNIRT----LESLCSVLGLNFRETVtkihpsLVDTEGSRSISNETLDKLASSVQQWHETKIQRMQE 248
Cdd:pfam03999 154 NLRNEKERRLEEVNELKKQikllMEELDLVPGTDFEEDL------LCESEDNFCLSRENIDKLRKLIKQLEEQKAEREEK 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762   249 LQDLVTTMLEFWNLMDTPAEEQQKFMdvscniaatvseiTKPNSLSIDLLEEVKAELCRLEELKWSKMKELVLKKRSELE 328
Cdd:pfam03999 228 IDDLREKILELWNRLQVPQEEQESFV-------------RENNSLSQDTIDALREELQRLEELKKKNIKKLIEDLRVEIE 294

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762   329 EICRRTHIVlEEEDIAVENVIKaiesgDVNPENILEQIEYRAGKVKEEALSRKEILEKADKWlnaceEENW-----LEEY 403
Cdd:pfam03999 295 ELWDKLFYS-TEQRKRFIPFFE-----ELYTEDLLELHELELKRLKEEYESNKEILELVEKW-----EELWedmeeLEAK 363

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15241762   404 NQDENRYNaGKGSHLILKRAEKARALVNKLPAMVEALASKITIWESEKEYEFLFDGNRLLS-MLEEY 469
Cdd:pfam03999 364 ANDPSRFN-NRGGKLLLKEEKERKRLTRKLPKIEQELTEKVEAWESEFGRPFLVNGEKLLEiIAEQW 429
 
Name Accession Description Interval E-value
MAP65_ASE1 pfam03999
Microtubule associated protein (MAP65/ASE1 family);
13-469 3.12e-69

Microtubule associated protein (MAP65/ASE1 family);


Pssm-ID: 427641 [Multi-domain]  Cd Length: 477  Bit Score: 230.27  E-value: 3.12e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762    13 LLQELEIIWKEVGETETEREKILIEIEEECREVYNRKIEKVKEEKIRIKQEIADSEARVIDICSVMEEPPILGRHHQSDQ 92
Cdd:pfam03999   3 LLDHLHVIWQEIGFSEDKRLQILSRLKDHIKEFYTDALSEENDKEQRILQSIADLRAEAAILCLYMRNRLLHEERDPFEP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762    93 QsgNGRSLKDELVKILQKLEEMEKRKSERKIQFIQVIDDIRCVREEINGESDDEtcssdfsADESDLSLRKLEELHRELY 172
Cdd:pfam03999  83 K--KGMSLLQKEKKLDTQLEHLRKEKAPRLAEIKELLEQLQQLCEELGEEPLPL-------LIDPLPSLEELESFRKHLE 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762   173 TLQEQKRNRVKQIQDNIRT----LESLCSVLGLNFRETVtkihpsLVDTEGSRSISNETLDKLASSVQQWHETKIQRMQE 248
Cdd:pfam03999 154 NLRNEKERRLEEVNELKKQikllMEELDLVPGTDFEEDL------LCESEDNFCLSRENIDKLRKLIKQLEEQKAEREEK 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762   249 LQDLVTTMLEFWNLMDTPAEEQQKFMdvscniaatvseiTKPNSLSIDLLEEVKAELCRLEELKWSKMKELVLKKRSELE 328
Cdd:pfam03999 228 IDDLREKILELWNRLQVPQEEQESFV-------------RENNSLSQDTIDALREELQRLEELKKKNIKKLIEDLRVEIE 294

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762   329 EICRRTHIVlEEEDIAVENVIKaiesgDVNPENILEQIEYRAGKVKEEALSRKEILEKADKWlnaceEENW-----LEEY 403
Cdd:pfam03999 295 ELWDKLFYS-TEQRKRFIPFFE-----ELYTEDLLELHELELKRLKEEYESNKEILELVEKW-----EELWedmeeLEAK 363

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15241762   404 NQDENRYNaGKGSHLILKRAEKARALVNKLPAMVEALASKITIWESEKEYEFLFDGNRLLS-MLEEY 469
Cdd:pfam03999 364 ANDPSRFN-NRGGKLLLKEEKERKRLTRKLPKIEQELTEKVEAWESEFGRPFLVNGEKLLEiIAEQW 429
 
Name Accession Description Interval E-value
MAP65_ASE1 pfam03999
Microtubule associated protein (MAP65/ASE1 family);
13-469 3.12e-69

Microtubule associated protein (MAP65/ASE1 family);


Pssm-ID: 427641 [Multi-domain]  Cd Length: 477  Bit Score: 230.27  E-value: 3.12e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762    13 LLQELEIIWKEVGETETEREKILIEIEEECREVYNRKIEKVKEEKIRIKQEIADSEARVIDICSVMEEPPILGRHHQSDQ 92
Cdd:pfam03999   3 LLDHLHVIWQEIGFSEDKRLQILSRLKDHIKEFYTDALSEENDKEQRILQSIADLRAEAAILCLYMRNRLLHEERDPFEP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762    93 QsgNGRSLKDELVKILQKLEEMEKRKSERKIQFIQVIDDIRCVREEINGESDDEtcssdfsADESDLSLRKLEELHRELY 172
Cdd:pfam03999  83 K--KGMSLLQKEKKLDTQLEHLRKEKAPRLAEIKELLEQLQQLCEELGEEPLPL-------LIDPLPSLEELESFRKHLE 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762   173 TLQEQKRNRVKQIQDNIRT----LESLCSVLGLNFRETVtkihpsLVDTEGSRSISNETLDKLASSVQQWHETKIQRMQE 248
Cdd:pfam03999 154 NLRNEKERRLEEVNELKKQikllMEELDLVPGTDFEEDL------LCESEDNFCLSRENIDKLRKLIKQLEEQKAEREEK 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762   249 LQDLVTTMLEFWNLMDTPAEEQQKFMdvscniaatvseiTKPNSLSIDLLEEVKAELCRLEELKWSKMKELVLKKRSELE 328
Cdd:pfam03999 228 IDDLREKILELWNRLQVPQEEQESFV-------------RENNSLSQDTIDALREELQRLEELKKKNIKKLIEDLRVEIE 294

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241762   329 EICRRTHIVlEEEDIAVENVIKaiesgDVNPENILEQIEYRAGKVKEEALSRKEILEKADKWlnaceEENW-----LEEY 403
Cdd:pfam03999 295 ELWDKLFYS-TEQRKRFIPFFE-----ELYTEDLLELHELELKRLKEEYESNKEILELVEKW-----EELWedmeeLEAK 363

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15241762   404 NQDENRYNaGKGSHLILKRAEKARALVNKLPAMVEALASKITIWESEKEYEFLFDGNRLLS-MLEEY 469
Cdd:pfam03999 364 ANDPSRFN-NRGGKLLLKEEKERKRLTRKLPKIEQELTEKVEAWESEFGRPFLVNGEKLLEiIAEQW 429
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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