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Conserved domains on  [gi|15242817|ref|NP_200572|]
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GCK domain-containing protein [Arabidopsis thaliana]

Protein Classification

GCK domain-containing protein( domain architecture ID 10544655)

GCK domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GCK pfam07802
GCK domain; This domain is found in proteins carrying other domains known to be involved in ...
 82-155 1.37e-30

GCK domain; This domain is found in proteins carrying other domains known to be involved in intracellular signalling pathways (such as pfam00071) indicating that it might also be involved in these pathways. It has 4 highly conserved cysteine residues, suggesting that it can bind zinc ions. Moreover, it is found repeated in some members of this family; this may indicate that these domains are able to interact with one another, raising the possibility that this domain mediates heterodimerization.


:

Pssm-ID: 429666  Cd Length: 74  Bit Score: 107.80  E-value: 1.37e-30
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15242817    82 GECPLCQFIKGGECKEAFTELENCCDEAKKNNEDHVSKCKEARLIFKTCMYDNPVYYEPLLAGEARAMAKMLSE 155
Cdd:pfam07802   1 GECGFCLFMKGGGCKEAFIAWEDCVEEAEKNKEDIVTKCAEVTATLKKCMDAHSDYYEPILAAEKAAEEEMEKE 74
 
Name Accession Description Interval E-value
GCK pfam07802
GCK domain; This domain is found in proteins carrying other domains known to be involved in ...
 82-155 1.37e-30

GCK domain; This domain is found in proteins carrying other domains known to be involved in intracellular signalling pathways (such as pfam00071) indicating that it might also be involved in these pathways. It has 4 highly conserved cysteine residues, suggesting that it can bind zinc ions. Moreover, it is found repeated in some members of this family; this may indicate that these domains are able to interact with one another, raising the possibility that this domain mediates heterodimerization.


Pssm-ID: 429666  Cd Length: 74  Bit Score: 107.80  E-value: 1.37e-30
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15242817    82 GECPLCQFIKGGECKEAFTELENCCDEAKKNNEDHVSKCKEARLIFKTCMYDNPVYYEPLLAGEARAMAKMLSE 155
Cdd:pfam07802   1 GECGFCLFMKGGGCKEAFIAWEDCVEEAEKNKEDIVTKCAEVTATLKKCMDAHSDYYEPILAAEKAAEEEMEKE 74
 
Name Accession Description Interval E-value
GCK pfam07802
GCK domain; This domain is found in proteins carrying other domains known to be involved in ...
 82-155 1.37e-30

GCK domain; This domain is found in proteins carrying other domains known to be involved in intracellular signalling pathways (such as pfam00071) indicating that it might also be involved in these pathways. It has 4 highly conserved cysteine residues, suggesting that it can bind zinc ions. Moreover, it is found repeated in some members of this family; this may indicate that these domains are able to interact with one another, raising the possibility that this domain mediates heterodimerization.


Pssm-ID: 429666  Cd Length: 74  Bit Score: 107.80  E-value: 1.37e-30
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15242817    82 GECPLCQFIKGGECKEAFTELENCCDEAKKNNEDHVSKCKEARLIFKTCMYDNPVYYEPLLAGEARAMAKMLSE 155
Cdd:pfam07802   1 GECGFCLFMKGGGCKEAFIAWEDCVEEAEKNKEDIVTKCAEVTATLKKCMDAHSDYYEPILAAEKAAEEEMEKE 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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