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Conserved domains on  [gi|79536755|ref|NP_200127|]
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DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3444 pfam11926
Domain of unknown function (DUF3444); This presumed domain is functionally uncharacterized. ...
 444-653 1.43e-105

Domain of unknown function (DUF3444); This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 210 amino acids in length. This domain is found associated with pfam00226. This domain has two conserved sequence motifs: FSH and FSH.


:

Pssm-ID: 463398  Cd Length: 210  Bit Score: 320.69  E-value: 1.43e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755   444 EVKEIVVPDSDFHNFDLDRSESAFKDDQIWAAYDDADGMPRFYARIQKVISVNPFKLKISWLNSKTtSEFGPIDWMGAGF 523
Cdd:pfam11926   1 EPESMEVPDPDFHDFDKDRSEECFAVGQIWALYDDDDGMPRYYARIRKVILSPEFKLRISWLEPDP-DEEEEINWVESGL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755   524 AKSCGDFRCGRYESTDTLNAFSHSVDFTKGARGLLHILPKKGQVWALYRNWSPEWDkNTPDEV-KHKYEMVEVLDDYTEd 602
Cdd:pfam11926  80 PVSCGRFRVGKSETTDDVNIFSHQVSCEKGRRGEYEIYPRKGEVWALYKNWSIDWS-STPDKHrKYEYEIVEVLSDYSE- 157

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 79536755   603 DQSLTVALLLKAEGFRVVFRRCTEKLG--VRKIAKEEMLRFSHQVPHYILTGK 653
Cdd:pfam11926 158 EAGVSVAYLVKVKGFKSVFKRHLDEGGesIFTIPKEEMLRFSHQVPSFRLTGE 210
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 66-127 2.12e-22

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 91.00  E-value: 2.12e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79536755    66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKN-KCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
zinc_YnfU_fam super family cl45814
YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding ...
 208-239 3.49e-03

YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding proteins is YnfU, from the Qin prophage region of E. coli K-12.


The actual alignment was detected with superfamily member NF038384:

Pssm-ID: 439677  Cd Length: 52  Bit Score: 36.06  E-value: 3.49e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 79536755  208 CNKC--DTQYEYQRVYLNQTLLCPHCHHGFVAEE 239
Cdd:NF038384  19 CPKCakVSEQSASKVQKNATLICPKCGALFLPKE 52
 
Name Accession Description Interval E-value
DUF3444 pfam11926
Domain of unknown function (DUF3444); This presumed domain is functionally uncharacterized. ...
 444-653 1.43e-105

Domain of unknown function (DUF3444); This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 210 amino acids in length. This domain is found associated with pfam00226. This domain has two conserved sequence motifs: FSH and FSH.


Pssm-ID: 463398  Cd Length: 210  Bit Score: 320.69  E-value: 1.43e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755   444 EVKEIVVPDSDFHNFDLDRSESAFKDDQIWAAYDDADGMPRFYARIQKVISVNPFKLKISWLNSKTtSEFGPIDWMGAGF 523
Cdd:pfam11926   1 EPESMEVPDPDFHDFDKDRSEECFAVGQIWALYDDDDGMPRYYARIRKVILSPEFKLRISWLEPDP-DEEEEINWVESGL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755   524 AKSCGDFRCGRYESTDTLNAFSHSVDFTKGARGLLHILPKKGQVWALYRNWSPEWDkNTPDEV-KHKYEMVEVLDDYTEd 602
Cdd:pfam11926  80 PVSCGRFRVGKSETTDDVNIFSHQVSCEKGRRGEYEIYPRKGEVWALYKNWSIDWS-STPDKHrKYEYEIVEVLSDYSE- 157

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 79536755   603 DQSLTVALLLKAEGFRVVFRRCTEKLG--VRKIAKEEMLRFSHQVPHYILTGK 653
Cdd:pfam11926 158 EAGVSVAYLVKVKGFKSVFKRHLDEGGesIFTIPKEEMLRFSHQVPSFRLTGE 210
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 66-127 2.12e-22

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 91.00  E-value: 2.12e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79536755    66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKN-KCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 66-119 8.95e-18

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 77.59  E-value: 8.95e-18
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 79536755  66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC-KGAEGAFNLVAEAWALLSD 119
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
66-122 8.76e-17

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 74.96  E-value: 8.76e-17
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 79536755     66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC--KGAEGAFNLVAEAWALLSDKDK 122
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGdkEEAEEKFKEINEAYEVLSDPEK 60
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 66-185 9.56e-17

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 77.44  E-value: 9.56e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755  66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNK-CKGAEGAFNLVAEAWALLSDKDKRILYNVKRGKDVKAAQQRFPTT 144
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPgDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAES 80

                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 79536755 145 QREIPSHQPTSNGIPNVREHVVSSARARYKPATRKPAARMD 185
Cdd:COG0484  81 AAAEAAAAEAKEEAAEAGASEYEAIAEEASQLRLASLLLLL 121
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 66-127 2.05e-15

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 78.41  E-value: 2.05e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755    66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYD 62
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 66-127 2.89e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 78.35  E-value: 2.89e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYD 67
zinc_YnfU_fam NF038384
YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding ...
 208-239 3.49e-03

YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding proteins is YnfU, from the Qin prophage region of E. coli K-12.


Pssm-ID: 439677  Cd Length: 52  Bit Score: 36.06  E-value: 3.49e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 79536755  208 CNKC--DTQYEYQRVYLNQTLLCPHCHHGFVAEE 239
Cdd:NF038384  19 CPKCakVSEQSASKVQKNATLICPKCGALFLPKE 52
 
Name Accession Description Interval E-value
DUF3444 pfam11926
Domain of unknown function (DUF3444); This presumed domain is functionally uncharacterized. ...
 444-653 1.43e-105

Domain of unknown function (DUF3444); This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 210 amino acids in length. This domain is found associated with pfam00226. This domain has two conserved sequence motifs: FSH and FSH.


Pssm-ID: 463398  Cd Length: 210  Bit Score: 320.69  E-value: 1.43e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755   444 EVKEIVVPDSDFHNFDLDRSESAFKDDQIWAAYDDADGMPRFYARIQKVISVNPFKLKISWLNSKTtSEFGPIDWMGAGF 523
Cdd:pfam11926   1 EPESMEVPDPDFHDFDKDRSEECFAVGQIWALYDDDDGMPRYYARIRKVILSPEFKLRISWLEPDP-DEEEEINWVESGL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755   524 AKSCGDFRCGRYESTDTLNAFSHSVDFTKGARGLLHILPKKGQVWALYRNWSPEWDkNTPDEV-KHKYEMVEVLDDYTEd 602
Cdd:pfam11926  80 PVSCGRFRVGKSETTDDVNIFSHQVSCEKGRRGEYEIYPRKGEVWALYKNWSIDWS-STPDKHrKYEYEIVEVLSDYSE- 157

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 79536755   603 DQSLTVALLLKAEGFRVVFRRCTEKLG--VRKIAKEEMLRFSHQVPHYILTGK 653
Cdd:pfam11926 158 EAGVSVAYLVKVKGFKSVFKRHLDEGGesIFTIPKEEMLRFSHQVPSFRLTGE 210
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 66-127 2.12e-22

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 91.00  E-value: 2.12e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79536755    66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKN-KCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 66-119 8.95e-18

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 77.59  E-value: 8.95e-18
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 79536755  66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC-KGAEGAFNLVAEAWALLSD 119
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
66-122 8.76e-17

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 74.96  E-value: 8.76e-17
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 79536755     66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC--KGAEGAFNLVAEAWALLSDKDK 122
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGdkEEAEEKFKEINEAYEVLSDPEK 60
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 66-185 9.56e-17

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 77.44  E-value: 9.56e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755  66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNK-CKGAEGAFNLVAEAWALLSDKDKRILYNVKRGKDVKAAQQRFPTT 144
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPgDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAES 80

                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 79536755 145 QREIPSHQPTSNGIPNVREHVVSSARARYKPATRKPAARMD 185
Cdd:COG0484  81 AAAEAAAAEAKEEAAEAGASEYEAIAEEASQLRLASLLLLL 121
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 66-127 2.05e-15

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 78.41  E-value: 2.05e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755    66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYD 62
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 66-127 2.89e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 78.35  E-value: 2.89e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYD 67
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 66-123 4.99e-15

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 70.03  E-value: 4.99e-15
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 79536755  66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC-KGAEGAFNLVAEAWALLSDKDKR 123
Cdd:COG5407   1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGdPKAEERFKEINEAYELLSDAEKR 59
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 66-126 2.19e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 75.57  E-value: 2.19e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNK-CKGAEGAFNLVAEAWALLSDKDKRILY 126
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPgDKEAEEKFKEIKEAYEVLSDPQKRAAY 66
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
64-155 2.32e-14

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 68.98  E-value: 2.32e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755  64 EADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKG--AEGAFNLVAEAWALLSDKDKRILYnvkrgkDVKAAQQRF 141
Cdd:COG2214   4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKalAEELFQRLNEAYEVLSDPERRAEY------DRELGQSGK 77

                        90
                ....*....|....
gi 79536755 142 PTTQREIPSHQPTS 155
Cdd:COG2214  78 GSASQPSAAAQRLA 91
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 64-127 1.30e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 70.12  E-value: 1.30e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 79536755   64 EADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14276   3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYD 66
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 65-127 2.73e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 69.15  E-value: 2.73e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79536755   65 ADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14292   2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYD 64
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 62-127 3.32e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 68.70  E-value: 3.32e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 79536755   62 AGEADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14283   2 AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYD 67
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 62-127 7.26e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 67.48  E-value: 7.26e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 79536755   62 AGEADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC-KGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14294   1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGdKEAEELFKEAAEAYEVLSDPKKRGIYD 67
PRK14289 PRK14289
molecular chaperone DnaJ;
66-127 7.59e-12

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 67.55  E-value: 7.59e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC-KGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14289   6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGdKEAEEKFKEAAEAYDVLSDPDKRSRYD 68
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 66-127 1.35e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 67.10  E-value: 1.35e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14291   4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYD 65
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 62-127 1.42e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 66.75  E-value: 1.42e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 79536755   62 AGEADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC-KGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14277   2 AAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGdKEAEQKFKEINEAYEILSDPQKRAQYD 68
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 62-127 1.79e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 65.73  E-value: 1.79e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 79536755   62 AGEADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14299   1 MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYD 66
PRK14280 PRK14280
molecular chaperone DnaJ;
66-127 2.20e-11

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 66.28  E-value: 2.20e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14280   5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYD 66
PRK14297 PRK14297
molecular chaperone DnaJ;
66-127 2.55e-11

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 65.96  E-value: 2.55e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC-KGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14297   5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGnKEAEEKFKEINEAYQVLSDPQKKAQYD 67
PRK14279 PRK14279
molecular chaperone DnaJ;
64-130 3.13e-11

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 65.91  E-value: 3.13e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 79536755   64 EADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC-KGAEGAFNLVAEAWALLSDKDKRILYNVKR 130
Cdd:PRK14279   8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGdPAAEERFKAVSEAHDVLSDPAKRKEYDETR 75
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 66-127 6.43e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 64.69  E-value: 6.43e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14278   4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVD 65
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 65-133 1.16e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 64.09  E-value: 1.16e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755   65 ADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKG-AEGAFNLVAEAWALLSDKDKRILYNvKRGKD 133
Cdd:PRK14284   1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAeAEKRFKEVSEAYEVLSDAQKRESYD-RYGKD 69
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 66-127 1.93e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 63.29  E-value: 1.93e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKN-KCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14281   4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNpDNKEAEEHFKEVNEAYEVLSNDDKRRRYD 66
PRK10266 PRK10266
curved DNA-binding protein;
66-127 3.16e-10

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 62.15  E-value: 3.16e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK10266   5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYD 66
PRK14295 PRK14295
molecular chaperone DnaJ;
64-130 4.40e-10

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 62.17  E-value: 4.40e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 79536755   64 EADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCK-GAEGAFNLVAEAWALLSDKDKRILYNVKR 130
Cdd:PRK14295   8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDaKAEERFKEISEAYDVLSDEKKRKEYDEAR 75
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 66-127 7.76e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 61.30  E-value: 7.76e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKG-AEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14301   5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPeAEQKFKEAAEAYEVLRDAEKRARYD 67
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 64-127 1.02e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 61.16  E-value: 1.02e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 79536755   64 EADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC-KGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14286   3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGnKESEEKFKEATEAYEILRDPKKRQAYD 67
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 66-127 1.27e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 60.79  E-value: 1.27e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14287   5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYD 66
PRK14293 PRK14293
molecular chaperone DnaJ;
65-127 2.08e-09

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 60.00  E-value: 2.08e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79536755   65 ADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14293   3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYD 65
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 66-127 3.14e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 59.58  E-value: 3.14e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14296   5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYD 66
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 66-141 4.42e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 58.79  E-value: 4.42e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPD---KNKCKgAEGAFNLVAEAWALLSDKDKRILYNVKRGKDVKAAQQRF 141
Cdd:PRK14290   4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDlhpGNKAE-AEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNF 81
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 66-127 1.07e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 57.88  E-value: 1.07e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKN--KCKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14282   5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHpeNRKEAEQKFKEIQEAYEVLSDPQKRAMYD 68
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 66-127 2.30e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 56.54  E-value: 2.30e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNK-CKGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PRK14285   4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKgNKEAESIFKEATEAYEVLIDDNKRAQYD 66
PRK14288 PRK14288
molecular chaperone DnaJ;
64-139 5.52e-08

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 55.47  E-value: 5.52e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 79536755   64 EADWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKC-KGAEGAFNLVAEAWALLSDKDKRILYNV--KRGKDVKAAQQ 139
Cdd:PRK14288   2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGdKEAEEKFKLINEAYGVLSDEKKRALYDRygKKGLNQAGASQ 80
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 66-139 1.96e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 53.86  E-value: 1.96e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 79536755   66 DWYGVLGVDPFASDEALKKQYRKLVLMLHPDKNKCKGAEGAFNLVAEAWALLSDKDKRILYNvKRGKDVKAAQQ 139
Cdd:PRK14300   4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYD-RFGHDAFQNQQ 76
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
63-97 2.43e-07

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 48.64  E-value: 2.43e-07
                        10        20        30
                ....*....|....*....|....*....|....*
gi 79536755  63 GEADWYGVLGVDPFASDEALKKQYRKLVLMLHPDK 97
Cdd:COG1076   2 QLDDAFELLGLPPDADDAELKRAYRKLQREHHPDR 36
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 68-127 1.62e-05

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 47.89  E-value: 1.62e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755   68 YGVLGVDPFASDEALKKQYRKLVLMLHPDKNkckGAEGAFNLVAEAWALLSDKDKRILYN 127
Cdd:PTZ00037  31 YEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG---GDPEKFKEISRAYEVLSDPEKRKIYD 87
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 50-127 4.59e-04

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 43.10  E-value: 4.59e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79536755  50 AINVYISGEKTFAGEADWYGVLGVDPF---ASDEALKKQYRKLVLMLHPDKNKC---KGAEGAFNLVAEAWALLSDKDKR 123
Cdd:COG5269  28 VLNLYTREDFKNWKKVDLYALLGLSKYrtkAIPPQILKAHKKKVYKYHPDKTAAggnKGCDEFFKLIQKAREVLGDRKLR 107


                ....
gi 79536755 124 ILYN 127
Cdd:COG5269 108 LQYD 111
djlA PRK09430
co-chaperone DjlA;
65-97 5.44e-04

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 42.49  E-value: 5.44e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 79536755   65 ADWYGVLGVDPFASDEALKKQYRKLVLMLHPDK 97
Cdd:PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
zinc_YnfU_fam NF038384
YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding ...
 208-239 3.49e-03

YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding proteins is YnfU, from the Qin prophage region of E. coli K-12.


Pssm-ID: 439677  Cd Length: 52  Bit Score: 36.06  E-value: 3.49e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 79536755  208 CNKC--DTQYEYQRVYLNQTLLCPHCHHGFVAEE 239
Cdd:NF038384  19 CPKCakVSEQSASKVQKNATLICPKCGALFLPKE 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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