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Conserved domains on  [gi|15237370|ref|NP_199417|]
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peptide transporter 3 [Arabidopsis thaliana]

Protein Classification

NRT1/PTR family MFS transporter( domain architecture ID 13024499)

NRT1/PTR (nitrate transporter/peptide transporter) family major facilitator superfamily (MFS) transporter is a proton-coupled transporter that facilitates the transport of one or more from a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA)

CATH:  1.20.1250.20
Gene Ontology:  GO:0016020|GO:0055085|GO:0022857
SCOP:  3000310
TCDB:  2.A.17

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_NPF5 cd17417
NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The ...
31-563 0e+00

NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF5 includes Arabidopsis thaliana PTR3 (AtPTR3, now named AtNPF5.2), which is a wound-induced peptide transporter that is necessary for defense against virulent bacterial pathogens. NPF5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340975 [Multi-domain]  Cd Length: 452  Bit Score: 669.36  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  31 WKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYF 110
Cdd:cd17417   1 WKACSFIIGIEVAERFAYYGIASNLVTYLTTPLHQSTARAAKNVNNWSGTATLLPLLGAFVADAYLGRYRTILISSLIYL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 111 SGMMVLTLSVTIPGIKPPECSttnvENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFF 190
Cdd:cd17417  81 LGLVLLTLSASLPSLKPPECN----GTCSKASTLQVAFFFFSLYLVAIGQGGHKPCVQAFGADQFDEDDPKEKKQKSSFF 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 191 NWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKlptgspftkmarvivasfrkanapm 270
Cdd:cd17417 157 NWWYFSICAGSLTAVTVLVYIQDNVGWALGFGIPTIVMALALFVFLLGTPLYRYK------------------------- 211
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 271 thditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteVEETKQMLRMLPVLFITFVPSMMLAQIN 350
Cdd:cd17417 212 ----------------------------------------------------VEEVKLVLRLIPIWFTTLVFTVVFAQSP 239
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 351 TLFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASV 430
Cdd:cd17417 240 TFFTKQGVTMDRTIGPNFKIPPASLQSFITLSILISIPIYDRVFVPIARKITGNPRGITLLQRIGIGMFLSILAMVIAAL 319
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 431 TERYRLKVAADHGLIhQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSF 510
Cdd:cd17417 320 VEMKRLKVAKEHGLI-SPKATVPMSIFWLLPQYILLGIADVFTMVGMQEFFYDQVPDEMRSLGTALYLSVFGVGSFLSSF 398
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....
gi 15237370 511 LLSTVSEITKKRGR-GWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFYVY 563
Cdd:cd17417 399 LISIVDKITSSSGGqSWFNNNLNRAHLDYFYWLLAVLSAVNFVLFLFVAKSYVY 452
 
Name Accession Description Interval E-value
MFS_NPF5 cd17417
NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The ...
31-563 0e+00

NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF5 includes Arabidopsis thaliana PTR3 (AtPTR3, now named AtNPF5.2), which is a wound-induced peptide transporter that is necessary for defense against virulent bacterial pathogens. NPF5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340975 [Multi-domain]  Cd Length: 452  Bit Score: 669.36  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  31 WKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYF 110
Cdd:cd17417   1 WKACSFIIGIEVAERFAYYGIASNLVTYLTTPLHQSTARAAKNVNNWSGTATLLPLLGAFVADAYLGRYRTILISSLIYL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 111 SGMMVLTLSVTIPGIKPPECSttnvENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFF 190
Cdd:cd17417  81 LGLVLLTLSASLPSLKPPECN----GTCSKASTLQVAFFFFSLYLVAIGQGGHKPCVQAFGADQFDEDDPKEKKQKSSFF 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 191 NWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKlptgspftkmarvivasfrkanapm 270
Cdd:cd17417 157 NWWYFSICAGSLTAVTVLVYIQDNVGWALGFGIPTIVMALALFVFLLGTPLYRYK------------------------- 211
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 271 thditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteVEETKQMLRMLPVLFITFVPSMMLAQIN 350
Cdd:cd17417 212 ----------------------------------------------------VEEVKLVLRLIPIWFTTLVFTVVFAQSP 239
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 351 TLFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASV 430
Cdd:cd17417 240 TFFTKQGVTMDRTIGPNFKIPPASLQSFITLSILISIPIYDRVFVPIARKITGNPRGITLLQRIGIGMFLSILAMVIAAL 319
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 431 TERYRLKVAADHGLIhQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSF 510
Cdd:cd17417 320 VEMKRLKVAKEHGLI-SPKATVPMSIFWLLPQYILLGIADVFTMVGMQEFFYDQVPDEMRSLGTALYLSVFGVGSFLSSF 398
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....
gi 15237370 511 LLSTVSEITKKRGR-GWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFYVY 563
Cdd:cd17417 399 LISIVDKITSSSGGqSWFNNNLNRAHLDYFYWLLAVLSAVNFVLFLFVAKSYVY 452
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
99-527 3.78e-94

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 293.84  E-value: 3.78e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370    99 YITFVISCAIYFSGMMVLTLSvTIPGIKPPecsttnvencekasvLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVF 178
Cdd:pfam00854   1 FRTIFLGSIIYAIGHILLALS-AIPSLRPP---------------VHVALFFIGLALIALGTGGIKPNVSSFGGDQFEET 64
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   179 DPKEKTQklsFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKLPTGSPFTKMARV 258
Cdd:pfam00854  65 DPRRRSR---FFSIFYFSINAGSLISTIITPYLQQNYGYPLGFGLPAVGMIIALLVFLLGSRMYKKKPPKGNVLTKVFKV 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   259 I-VASFRKANAPMThdITSFHELPSLEYERkgafpihptpSLRFLDRASLKTGTNHKWNLCTTTEVEETKQMLRMLPVLF 337
Cdd:pfam00854 142 LpVAAWNKVKLNGS--SAGIKKLHWLDWAR----------ELDALIILGIVVPGIFFNIWCTKTKVEEVKRLLRVLPLFL 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   338 ITFVPSMMLAQINTLFVKQGTTLDRKVtGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPrgiTLLQRMGIG 417
Cdd:pfam00854 210 PLIMFWALYDQMGTSWVLQARTMNRKI-GSFEIPPAQFQAFNAILVLIFIPIFDRLVYPLGRKCTGGL---TPLQKMAVG 285
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   418 LIFHILIMIVASVTERYRLKVAADHGLIHQtgvkLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYS 497
Cdd:pfam00854 286 LFLASLAFAIAAIVQLKRNDTGPEFPIAQE----VPISVLWLIPQYLLIGFGELFISIGGLEFFYKLAPKSMTSLITGLF 361
                         410       420       430
                  ....*....|....*....|....*....|.
gi 15237370   498 TTSLAIGNFMSSFLLSTVSEITKKRGR-GWI 527
Cdd:pfam00854 362 LLTNALGNFLSGVIATLTAKPTNVLGAyGWL 392
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
41-511 2.57e-27

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 115.30  E-value: 2.57e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  41 EVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTN-----WVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMV 115
Cdd:COG3104  23 EMWERFSFYGMRAILVLYLTASLADGGLGLSEADAAaiygaYTALVYLTPLLGGWLADRLLGQRRAILLGGILMALGHFL 102
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 116 LTLSVTIPGikppecsttnvencekasvlqlavFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKtqklSFFNWWMF 195
Cdd:COG3104 103 LALPGGVTL------------------------FYLGLALIAVGNGLFKPNISSLVGQLYDPGDPRRD----AGFTIFYM 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 196 SIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHK-LPTGSPFTKMARVI-VASFRKANAPMTHD 273
Cdd:COG3104 155 GINIGAFLAPLLCGYLGEKYGWHYGFGAAAIGMLIGLIIFLLGRKYLGDIgLEPDNPLSKKERLIaVALGALLLVLVLAG 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 274 ITSFHELPSLEYERKGAFPIhptpsLRFLDRASLKTGtnhkwnlctttevEETKQMLRMLPVLFITFVPSMMLAQINT-- 351
Cdd:COG3104 235 LLSNANIANYLLYVIAIIAY-----FIFILRSKKLTK-------------EERKRLLAILILFLFSIVFWALYEQAGTsl 296
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 352 -LFVKQGTtlDRKVTGsFSIPPASlsgFVTLSMLISIVLyDRVFVKITRKFTGNPRGITLLQRMGIGLIF---HILIMIV 427
Cdd:COG3104 297 nLFADRNV--DRSLFG-FEIPPSW---FQSLNPLFIIIL-APVFAALWTKLGKRGKEPSTPTKFALGLLLlglGFLVMAL 369
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 428 ASvteryrlKVAADHGLIHqtgvklpltIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFM 507
Cdd:COG3104 370 AA-------LLAGAGGKVS---------PLWLVLAYLLLTIGELCLSPVGLSMITKLAPARFAGQMMGLWFLATALGNLL 433

                ....
gi 15237370 508 SSFL 511
Cdd:COG3104 434 AGLL 437
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
48-432 3.04e-22

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 100.99  E-value: 3.04e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370    48 YYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMVLTLSVTIPGIKP 127
Cdd:TIGR00926   3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   128 PECSTTnvencekasvlqlavffgaLYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFANTV 207
Cdd:TIGR00926  83 LHDLLD-------------------LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTII 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   208 LVYVQDNVG-------WTLGYGLPTLGLAISITIFLLGTPFYRHKLPTGSPFTKMARVIVASFRKANApmthditsfhel 280
Cdd:TIGR00926 144 TPILRGDVGcfgcqdcYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFS------------ 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   281 psleyERKGAFPIHptpslrFLDRASLKTGTNhkwnlctttEVEETKQMLRMLpVLFITFVpsMMLA---QINTLFVKQG 357
Cdd:TIGR00926 212 -----TRSEHWPLH------WLDYAKDKHDIR---------MIRSTKRLLRVL-VLFIPLP--MFWAlfdQQGSRWTLQA 268
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15237370   358 TTLDRKVtGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNprgITLLQRMGIGLIFHILIMIVASVTE 432
Cdd:TIGR00926 269 TRMDGDV-GGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQ 339
PRK15462 PRK15462
dipeptide permease;
32-244 7.08e-13

dipeptide permease;


Pssm-ID: 237971 [Multi-domain]  Cd Length: 493  Bit Score: 71.13  E-value: 7.08e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   32 KACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFS 111
Cdd:PRK15462   9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  112 GMMVLTLSVTIPgikppecsttnvencekasvlqlAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQklsffn 191
Cdd:PRK15462  89 GHVVLGASEIHP-----------------------SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGG------ 139
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 15237370  192 wwmFSIFF-----GTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRH 244
Cdd:PRK15462 140 ---FSLMYaagnvGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTH 194
 
Name Accession Description Interval E-value
MFS_NPF5 cd17417
NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The ...
31-563 0e+00

NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF5 includes Arabidopsis thaliana PTR3 (AtPTR3, now named AtNPF5.2), which is a wound-induced peptide transporter that is necessary for defense against virulent bacterial pathogens. NPF5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340975 [Multi-domain]  Cd Length: 452  Bit Score: 669.36  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  31 WKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYF 110
Cdd:cd17417   1 WKACSFIIGIEVAERFAYYGIASNLVTYLTTPLHQSTARAAKNVNNWSGTATLLPLLGAFVADAYLGRYRTILISSLIYL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 111 SGMMVLTLSVTIPGIKPPECSttnvENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFF 190
Cdd:cd17417  81 LGLVLLTLSASLPSLKPPECN----GTCSKASTLQVAFFFFSLYLVAIGQGGHKPCVQAFGADQFDEDDPKEKKQKSSFF 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 191 NWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKlptgspftkmarvivasfrkanapm 270
Cdd:cd17417 157 NWWYFSICAGSLTAVTVLVYIQDNVGWALGFGIPTIVMALALFVFLLGTPLYRYK------------------------- 211
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 271 thditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteVEETKQMLRMLPVLFITFVPSMMLAQIN 350
Cdd:cd17417 212 ----------------------------------------------------VEEVKLVLRLIPIWFTTLVFTVVFAQSP 239
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 351 TLFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASV 430
Cdd:cd17417 240 TFFTKQGVTMDRTIGPNFKIPPASLQSFITLSILISIPIYDRVFVPIARKITGNPRGITLLQRIGIGMFLSILAMVIAAL 319
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 431 TERYRLKVAADHGLIhQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSF 510
Cdd:cd17417 320 VEMKRLKVAKEHGLI-SPKATVPMSIFWLLPQYILLGIADVFTMVGMQEFFYDQVPDEMRSLGTALYLSVFGVGSFLSSF 398
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....
gi 15237370 511 LLSTVSEITKKRGR-GWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFYVY 563
Cdd:cd17417 399 LISIVDKITSSSGGqSWFNNNLNRAHLDYFYWLLAVLSAVNFVLFLFVAKSYVY 452
MFS_NPF cd17351
Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant ...
34-544 0e+00

Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340909 [Multi-domain]  Cd Length: 445  Bit Score: 535.66  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  34 CSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGM 113
Cdd:cd17351   1 APFILGNEFAERLAFYGIAVNLVTYLTKVMHLSNAKAANTVTNFSGTSYLTPLLGAFLADAYLGRYWTIAIFSVIYLVGL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 114 MVLTLSVTIPGIKPPECSTTNVenCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWW 193
Cdd:cd17351  81 ILLTLSASVPSLRPPPCNPDSP--CEPASSTQLTVLYVGLYLIALGTGGIKPCVSAFGADQFDETDPKEKKQKPSFFNWF 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 194 MFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRhklptgspftkmarvivasfrkanapmthd 273
Cdd:cd17351 159 YFSINLGSLLAVTLVVYIQDNVSWGWGFGIPAAAMALAVIVFVAGTPFYR------------------------------ 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 274 itsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteveETKQMLRMLPVLFITFVPSMMLAQINTLF 353
Cdd:cd17351 209 ---------------------------------------------------EVKCLLRLLPIWATTILLSTVYAQMQTFF 237
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 354 VKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASVTER 433
Cdd:cd17351 238 VQQGLTMDRRLGGSFEIPAASLSVFSTLFVLLFIPLYDRVFVPFARRYTGNPRGITPLQRIGIGLVLSILAMAVAALVEV 317
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 434 YRLKVAADHGLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLLS 513
Cdd:cd17351 318 KRLRVARAHGLLDSPTGVVPMSVFWLLPQYFLLGLAEVFTYIGQLEFFYDEAPDGMRSLGTALFLLTIALGNFLSSALVT 397
                       490       500       510
                ....*....|....*....|....*....|..
gi 15237370 514 TVSEITKKRGR-GWILNNLNESRLDYYYLFFA 544
Cdd:cd17351 398 IVNKITGKGGGpGWLPNNLNKGRLDYFYWLLA 429
MFS_NPF8 cd17418
NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The ...
31-544 7.04e-156

NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF8 contains the Arabidopsis dipeptide transporters AtNPF8.1 (PTR1), AtNPF8.2 (PTR5), and AtNPF8.3 (PTR2), as well as tonoplast-localized transporters AtNPF8.4 (PTR4) and AtNPF8.5 (PTR6). Oryza sativa NRT1 (now called OsNPF8.9) is a low-affinity nitrate transporter. NPF8 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340976 [Multi-domain]  Cd Length: 447  Bit Score: 454.24  E-value: 7.04e-156
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  31 WKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYF 110
Cdd:cd17418   1 WKACPFILGNECCERLAYYGIATNLITYLTKELHQGNVSAANNVTNWSGTCYITPLIGAFIADAYWGRYWTIASFSAIYF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 111 SGMMVLTLSVTIPGIKPPECsttNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFF 190
Cdd:cd17418  81 IGMVLLTLSASVPGLKPASC---IGSLCPPATSVQYAVFFLGLYLIALGTGGIKPCVSSFGADQFDDTDPKEKVRKSSFF 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 191 NWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRhklptgspftkmarvivasfrkanapm 270
Cdd:cd17418 158 NWFYFSINIGALISSSVLVWIQENVGWGWGFGIPTVFMGIAIVSFFFGTPLYR--------------------------- 210
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 271 thditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteveETKQMLRMLPVLFITFVPSMMLAQIN 350
Cdd:cd17418 211 ------------------------------------------------------EVKILIRLLPIWASGIVFATVYSQMS 236
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 351 TLFVKQGTTLDRKVtGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASV 430
Cdd:cd17418 237 TMFVQQGRTMDRMG-GNFEIPPASLSLFDTLSVLIWVPIYDRFIVPLVRKFTGHERGFTQLQRMGIGLFISVLSMVAAAI 315
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 431 TERYRLKVAADHGLIhQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSF 510
Cdd:cd17418 316 VEIVRLQLARTHNLV-ESGPPVPMSIFWQIPQYFLIGAAEVFTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSL 394
                       490       500       510
                ....*....|....*....|....*....|....*
gi 15237370 511 LLSTVSEITKKRGR-GWILNNLNESRLDYYYLFFA 544
Cdd:cd17418 395 IVTLVTYVTTKGGKpGWIPDNLNNGHLDYFFWLLA 429
MFS_NPF7 cd17419
NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The ...
31-544 5.04e-153

NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF7 includes the nitrate transporters AtNPF7.2 and AtNPF7.3, as well as the dipeptide transporter OsNPF7.3. AtNPF7.3 is a bidirectional transporter involved in nitrate influx and efflux. NPF7 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340977 [Multi-domain]  Cd Length: 447  Bit Score: 446.82  E-value: 5.04e-153
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  31 WKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYF 110
Cdd:cd17419   1 WKSAIFILVNQGLATLAYFGVGVNLVLYLTRVMHQSNASAANNVSNWTGTVYITPLIGAFLSDSYWGRYWTSTLFQAIFV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 111 SGMMVLTLSVTIPGIKPPECSTTNVEnCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFF 190
Cdd:cd17419  81 IGLLLLTLSSALPSLRPPQCGDGDLK-CPPASAAQTTFLYFSLYLIALGYGGYQPCIATLGADQFDDEDPIEKASKSAFF 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 191 NWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRhklptgspftkmarvivasfrkanapm 270
Cdd:cd17419 160 SYFYQALNLGSLFSNTILVYFEDNGSWGLGFGISAGAAFIGLVLFLAGTPFYR--------------------------- 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 271 thditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteveETKQMLRMLPVLFITFVPSMMLAQIN 350
Cdd:cd17419 213 ------------------------------------------------------EVKCILRLLPIWLSTIIYSVVYTQMA 238
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 351 TLFVKQGTTLDRKVtGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASV 430
Cdd:cd17419 239 TLFVEQGAAMDTSF-GNFKIPPASMSVFEILSVAVGTVLYRKFLVPLLRKVTGHPKGITELQRMGIGLVIGILAMVVAAL 317
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 431 TERYRLKVAADHGLIHQTGVkLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSF 510
Cdd:cd17419 318 VEIQRLKVARPSNLDDPTSP-SPLSIFWQIPQYVLVGASEVFTYVGQLEFFYDQAPDGLRSLGSALCMASVALGNYLSSL 396
                       490       500       510
                ....*....|....*....|....*....|....*
gi 15237370 511 LLSTVSEITKKRGR-GWILNNLNESRLDYYYLFFA 544
Cdd:cd17419 397 LVTIVNKVTTKDGSpGWIPDNLNKGHLDRFYWLLA 431
MFS_NPF3 cd17415
NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The ...
31-544 1.27e-141

NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF3 is the smallest NPF subfamily and it includes Cucumis sativus nitrite transporter (CsNitr1), now named CsNPF3.2. It functions as a chloroplast nitrite uptake transporter to remove toxic nitrite from the cytosol. NPF3 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340973 [Multi-domain]  Cd Length: 448  Bit Score: 417.62  E-value: 1.27e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  31 WKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYF 110
Cdd:cd17415   1 WKTMPFIFGNEICERLASVGFHTNLITYLTLQLHMPLVKAANILTNFNGTASLTPLLGAFIADSFAGRFWTITIGSIIYQ 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 111 SGMMVLTLSVTIPGIKPPECSTtNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFF 190
Cdd:cd17415  81 LGMVLLTISAILPSLRPPPCNG-HEVCACQASSAQLSILYLSLLLTALGSGGIRPCVVAFGADQFDESDPKQAKQTWNFF 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 191 NWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRhklptgspftkmarvivasfrkanapm 270
Cdd:cd17415 160 NWYYFCMGIAILLAVTVIVYIQDNVGWGWGFGIPTIAMAISVIAFVVGSPLYR--------------------------- 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 271 thditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteveETKQMLRMLPVLFITFVPSMMLAQIN 350
Cdd:cd17415 213 ------------------------------------------------------ELKSIIRMLPIWAAGILLVTASSQQH 238
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 351 TLFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASV 430
Cdd:cd17415 239 TFSIQQARTMNRHLTPSFQIPPASMSVFGILSLLTTVPLYDRVLMPVARKFTGNERGITFLQRMGIGLFISILATVVAAF 318
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 431 TERYRLKVAADHGLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSF 510
Cdd:cd17415 319 VEVKRKSVAANHGLLDRPHATVPISVFWLVPQYILHGIAEAFMSIGHLEFFYDQSPESMRSTATALFWSTISLGSYLSTL 398
                       490       500       510
                ....*....|....*....|....*....|....
gi 15237370 511 LLSTVSEITKKRGRGWILNNLNESRLDYYYLFFA 544
Cdd:cd17415 399 LVTLVHKETSRGGRWWLPNNLNRGRLDYFYWLVA 432
MFS_NPF6 cd17413
NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The ...
31-540 8.69e-141

NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter 1/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF6 includes the first identified member of the NRT1/PTR family: Arabidopsis thaliana NRT1.1, now called AtNPF6.3. It is a dual affinity nitrate influx transporter and a nitrate sensor. It also transports auxin and has nitrate efflux activity. NPF6 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340971 [Multi-domain]  Cd Length: 457  Bit Score: 416.08  E-value: 8.69e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  31 WKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYF 110
Cdd:cd17413   1 WKSAALILGIEMCERLTTLGIGVNLVTYLTGTMHLPSATSANIVTNFLGTSFLLCLLGGFIADTFLGRYLTIAIFASIQA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 111 SGMMVLTLSVTIPGIKPPECSTTNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFF 190
Cdd:cd17413  81 LGVLVLTLSTTLPSLRPPPCNHTTSHHCEPASGIQLTVLYLALYLIALGTGGIKSSVSGFGSDQFDENDPKERKLMSYFF 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 191 NWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKLPTGSpftkmarvivasfrkanapm 270
Cdd:cd17413 161 NRFFFCISVGSLLAVTVLVYIQDNVGRGWGYGICAAAMVLAIVVFLAGTKRYRFKKSIGS-------------------- 220
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 271 thditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttTEVEETKQMLRMLPVLFITFVPSMMLAQIN 350
Cdd:cd17413 221 --------------------------------------------------TQVEEVKMVVRMLPIWATTILFWTVYAQMT 250
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 351 TLFVKQGTTLDRKVtGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASV 430
Cdd:cd17413 251 TFSVEQAETMDRNI-GSFEIPPASMAVFLVATILLTTAVYDRVIVPLCRKLTGHPQGLTTLQRIGVGLVFSCLAMAVAAL 329
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 431 TERYRLKVAADHGlihQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSF 510
Cdd:cd17413 330 VELKRLRIAHAHG---KPVKTVPMSVFWLVPQYFLVGAGEAFIYTGQLDFFIRESPKGMKSMSTGLFLSTLSLGFFVSSF 406
                       490       500       510
                ....*....|....*....|....*....|.
gi 15237370 511 LLSTVSEITKKRGR-GWILNNLNESRLDYYY 540
Cdd:cd17413 407 LVSIVNRVTGKSHPhGWLADNLNKGRLDYFY 437
MFS_NPF4 cd17414
NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The ...
32-544 4.00e-131

NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. Members of the NPF4 subfamily have been shown to transport ABA. NPF4 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340972 [Multi-domain]  Cd Length: 456  Bit Score: 391.00  E-value: 4.00e-131
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  32 KACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFS 111
Cdd:cd17414   2 RAAFFVLVVEALENMAYLANANNLVTYLINNMHYSLAKSANIVTNFVGTAFLLALLGGFLSDSFLSSFKTIIIFGSIELL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 112 GMMVLTLSVTIPGIKPPECSTTNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFN 191
Cdd:cd17414  82 GLILLTVQAHIPSLQPPSCNSLGDLTCKEPSGSQAAILFVGLYLVALGVGCIKPNLPSHGADQFDENDPKGRRQLSSFFN 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 192 WWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKlptgspftkmarvivasfrkanapmt 271
Cdd:cd17414 162 WYYFSFSLGALIAVTLVVWVEENKGWDWGFGVSAAVIAVGILVFVAGTPFYRNK-------------------------- 215
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 272 hditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttTEVEETKQMLRMLPVLFITFVPSMMLAQINT 351
Cdd:cd17414 216 -------------------------------------------------TQVEEVKIVLKMLPIFACTIILNCILAQLQT 246
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 352 LFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASVT 431
Cdd:cd17414 247 FSVQQGSTMNRTKIGSFNIPPASLQAIPVIFMLILVPLYDHLLVPFARKITGHESGITHLQRIGIGLVLSTLSMVVAALV 326
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 432 ERYRLKVAADHGLIHQTGVkLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFL 511
Cdd:cd17414 327 ETKRKKVAVENGLLNSKEN-LPISIFWIALQFLILGISDMFTAVGLLEFFYTESPSSMRSLGTALTWCSYSFGFYLSSVL 405
                       490       500       510
                ....*....|....*....|....*....|....*
gi 15237370 512 LSTVSEITKKRGR-GWIL-NNLNESRLDYYYLFFA 544
Cdd:cd17414 406 VSVVNKVTGSGGHgGWLLgENLNRDRLDLFYWLLC 440
MFS_NPF1_2 cd17416
NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; ...
35-544 1.15e-125

NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF1 includes Medicago truncatula LATD/NIP, now named MtNPF1.7, which is a high-affinity nitrate transporter and is involved in nodulation and root architecture. NPF2 members are well-established nitrate and glucosinolate transporters, including Arabidopsis nitrate influx and efflux transporters with varied tissue and developmental specificity. Examples are AtNPF2.7, which is expressed in the cortex of mature roots, and AtNPF2.9, which is expressed in root companion cells where it is involved in phloem loading. NPF1/2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340974 [Multi-domain]  Cd Length: 444  Bit Score: 376.61  E-value: 1.15e-125
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  35 SFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMM 114
Cdd:cd17416   2 PFIIGNETGEKLASYGLLANLIVYLIEEYNMKSIAAANIINIWSGTTNFLPVVGAFLSDSYFGRFPTISVGSFASLLGMV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 115 VLTLSVTIPGIKPPECSTTNvENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWWM 194
Cdd:cd17416  82 LLTLTAAIPSLRPPPCETAS-SLCQSPSKLQLAVLYSALALLSIGAGGIRPCSLAFGADQFDKKTESGKRGLESFFNWYY 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 195 FSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRhklptgspftkmarvivasfrkanapmthdi 274
Cdd:cd17416 161 FTFTVAQIISLTAIVYIQDNVSWKIGFGIPAALMLLSFILFLAGSRLYV------------------------------- 209
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 275 tsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteVEETKQMLRMLPVLFITFVPSMMLAQINTLFV 354
Cdd:cd17416 210 ------------------------------------------------VEDLKSLIRVIPIWSTGIILSLAMAQQMSLTV 241
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 355 KQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASVTERY 434
Cdd:cd17416 242 LQALVMDRHLGPSFQIPAGSITVFLLITLTIFIPLYDRVLVPLLRKITGRGRGLTLLQRVGIGIVFSILSMAVAAIVERK 321
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 435 RLKVAADHGlihqtGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLLST 514
Cdd:cd17416 322 RRKTALTQG-----NGTSPMSVLWLVPQLVLMGIAEAFHFIGQIEFFYQEFPESMRSTATSLFSLGMGVASYLSSALISA 396
                       490       500       510
                ....*....|....*....|....*....|.
gi 15237370 515 VSEITKKRGRG-WILNNLNESRLDYYYLFFA 544
Cdd:cd17416 397 VHRTTGRGGGGsWLPDDINKGRLDYVYWLLA 427
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
99-527 3.78e-94

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 293.84  E-value: 3.78e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370    99 YITFVISCAIYFSGMMVLTLSvTIPGIKPPecsttnvencekasvLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVF 178
Cdd:pfam00854   1 FRTIFLGSIIYAIGHILLALS-AIPSLRPP---------------VHVALFFIGLALIALGTGGIKPNVSSFGGDQFEET 64
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   179 DPKEKTQklsFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKLPTGSPFTKMARV 258
Cdd:pfam00854  65 DPRRRSR---FFSIFYFSINAGSLISTIITPYLQQNYGYPLGFGLPAVGMIIALLVFLLGSRMYKKKPPKGNVLTKVFKV 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   259 I-VASFRKANAPMThdITSFHELPSLEYERkgafpihptpSLRFLDRASLKTGTNHKWNLCTTTEVEETKQMLRMLPVLF 337
Cdd:pfam00854 142 LpVAAWNKVKLNGS--SAGIKKLHWLDWAR----------ELDALIILGIVVPGIFFNIWCTKTKVEEVKRLLRVLPLFL 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   338 ITFVPSMMLAQINTLFVKQGTTLDRKVtGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPrgiTLLQRMGIG 417
Cdd:pfam00854 210 PLIMFWALYDQMGTSWVLQARTMNRKI-GSFEIPPAQFQAFNAILVLIFIPIFDRLVYPLGRKCTGGL---TPLQKMAVG 285
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   418 LIFHILIMIVASVTERYRLKVAADHGLIHQtgvkLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYS 497
Cdd:pfam00854 286 LFLASLAFAIAAIVQLKRNDTGPEFPIAQE----VPISVLWLIPQYLLIGFGELFISIGGLEFFYKLAPKSMTSLITGLF 361
                         410       420       430
                  ....*....|....*....|....*....|.
gi 15237370   498 TTSLAIGNFMSSFLLSTVSEITKKRGR-GWI 527
Cdd:pfam00854 362 LLTNALGNFLSGVIATLTAKPTNVLGAyGWL 392
MFS_POT cd06175
Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of ...
34-544 1.78e-73

Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of transporters; The Proton-coupled oligopeptide transporter (POT) family is present across all major kingdoms of life and is known by a variety of names. It is referred to as the Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) in plants, and in addition to POT, it is also known as the Peptide transporter (PepT/PTR) or Solute Carrier 15 (SLC15) family in animals. Members of this family are proton-driven symporters involved in nitrogen acquisition in the form of di- and tripeptides. Plant members transport other nitrogenous ligands including nitrate, the plant hormone auxin, and glucosinolate compounds that are important for seed defense. POT proteins exhibit substrate multispecificity, with one transporter able to recognize as many as 8,400 types of di/tripeptides and certain peptide-like drugs. The POT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340865 [Multi-domain]  Cd Length: 422  Bit Score: 240.80  E-value: 1.78e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  34 CSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGM 113
Cdd:cd06175   1 CAMILLIELCERFTFYGIGANLVPFLTGALGLGNAQAANVVLNFLGTSYVTPLFGGWIADTFLGRYRTILIGAAIYAVGV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 114 MVLTLSVTIPGIKPPECsttNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPkEKTQklSFFNWW 193
Cdd:cd06175  81 AILTVSTIPPGLRPLRC---NPSHCEQASGIQLTGFYAALYLIALGTGGVKANVSPLGADQFDERGP-SKTQ--SFFNWF 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 194 MFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFllgtpfyrhklptgspftkmarvivasfrkanapmthd 273
Cdd:cd06175 155 YFCINVGSLLAMLGTPYIQDNVGWAAAYGIPFVAILLALVVF-------------------------------------- 196
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 274 itsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteveETKQMLRMLPvLFITFVPSMML-AQINTL 352
Cdd:cd06175 197 ---------------------------------------------------EVKQLLRALP-LFAFCILFWTVyAQMTTS 224
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 353 FVKQGTTLDRKvTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKftgNPRGITLLQRMGIGLIFHILIMIVASVTE 432
Cdd:cd06175 225 YVLQALTLVRS-TGLFTIPPASMQAFNPILLLLLIPVLDKVVYPLIRR---YGVGLSPLTKIGLGFFFGSLSMFVAGFLE 300
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 433 RYRLKVAADHGLIHQTGvklPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLL 512
Cdd:cd06175 301 LKRLNTAHAHGPVVTTS---PLSFWWQIPQYLLLGIGEILVSITGLEFAYREAPKSMKGFIMGLLLLTSGFGSFFGSVLV 377
                       490       500       510
                ....*....|....*....|....*....|..
gi 15237370 513 STVSEITkkrGRGWILNNLNESRLDYYYLFFA 544
Cdd:cd06175 378 TLVSKPT---DGAHIADDLNKGVLTNFFFLLA 406
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
33-544 6.78e-42

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 156.49  E-value: 6.78e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  33 ACSFVVVYEVFERMAYYGISSNLFIYMT-TKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFS 111
Cdd:cd17348   3 ACAAVLLVELLERAAFYGITSNLVLFLNgSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLYLL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 112 GMMVLtlsvtiPGIKPPecsttnvencekasvlqlaVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPkEKTQKlsFFN 191
Cdd:cd17348  83 GMLLF------PATAAP-------------------ALYAGLLLVGLGVGSVKANITPFGADQVKDRGP-EATRR--FFN 134
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 192 WWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFyrhklptgspftkmarvivasfrkanapmt 271
Cdd:cd17348 135 WFYWSINLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFLCGQPV------------------------------ 184
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 272 hditsfhelpsleyerkgafpihptpslrFLDraslktgtnhkwnlcttteveeTKQMLRMLPVlFITFVPSMMLA-QIN 350
Cdd:cd17348 185 -----------------------------FID----------------------VKALVKILPV-FLALIPYWTVYfQMQ 212
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 351 TLFVKQGTTLD----------RKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKftgnpRGI--TLLQRMGIGL 418
Cdd:cd17348 213 TTYVLQSLHLKipnifisniaGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKR-----RGLlpSSLKRIAVGM 287
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 419 IFHILIMIVASVTERYRLKVAADHGLIHQ-----TGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLG 493
Cdd:cd17348 288 FFVMCSAIAAGILESKRLEIVKHNTTIQQqignvTYYAADLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAI 367
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 15237370 494 TSYSTTSLAIGNFMSSFLLSTVSeitkKRGRGWILN-----NLNESRLDYYYLFFA 544
Cdd:cd17348 368 MGLFFFFSGVGSFVGSGLLALVS----IKEIGWMSShkdfgNINGCRLNYYFFLLA 419
MFS_SLC15A1_2_like cd17347
Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily ...
36-506 6.11e-40

Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily transporters; Solute carrier family 15 member 1 (SLC15A1) and SLC15A2 are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1, or peptide transporter 1 (PepT1), is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. SLC15A2, or peptide transporter 2 (PepT2), is abundantly expressed in the apical membrane of kidney proximal tubules and is also referred to as the renal isoform. Both proteins transport di/tripeptides, but not tetrapeptides or free amino acids, using the energy generated by an inwardly directed transmembrane proton gradient. The SLC15A1/SLC15A2-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340905 [Multi-domain]  Cd Length: 427  Bit Score: 150.85  E-value: 6.11e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  36 FVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMV 115
Cdd:cd17347   6 FIVGNEFCERFSYYGMRAILVLYLTDFLGFSEAEATAIYHSFVMLCYFFPLLGAIIADSYLGKYRTILYLSLVYCLGHIV 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 116 LTLSvTIPGIKPPecsttnvencekasvlQLAVFFGALYTLAIGTGGTKPNISTIGADQfdvFDPKEKTQKLSFFNWWMF 195
Cdd:cd17347  86 LAVT-AIPPLGPP----------------HVWGLLIGLLLIAIGTGGIKPCVSAFGGDQ---FGADQQHLLARFFSWFYF 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 196 SIFFGTLFANTVLVYVQDNV------GWTLGYGLPTLGLAISITIFLLGTPFYRhklptgspftkmarvivasfrkanap 269
Cdd:cd17347 146 AINAGSLLSTFLTPILRADVqfgghdCYPLAFGVPGVLMAVATLVFWLGRKHYK-------------------------- 199
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 270 mthditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteveETKQMLRMLpVLFItFVPS--MMLA 347
Cdd:cd17347 200 -------------------------------------------------------DVKALLRVL-VLFI-PLPVfwALFD 222
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 348 QINTLFVKQGTTLDRKVtGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNprgITLLQRMGIGLIFHILIMIV 427
Cdd:cd17347 223 QQGSRWTLQAEQMDGLV-GGFTILPDQMQALNPILILILIPLFDYVIYPLLERCGIP---LTPLRKMGVGMILAALAFVI 298
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 428 ASVteryrLKVAADHGLIHQTGVKLPLT----------IFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYS 497
Cdd:cd17347 299 AGF-----LQLRIDGGLPGQPDPGEVTTfediepnsvsILWQLPQYVVLTAGEVLFSITGLEFAYTQAPKSMKSVVQAAW 373

                ....*....
gi 15237370 498 TTSLAIGNF 506
Cdd:cd17347 374 LLTVALGNL 382
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
41-511 2.57e-27

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 115.30  E-value: 2.57e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  41 EVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTN-----WVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMV 115
Cdd:COG3104  23 EMWERFSFYGMRAILVLYLTASLADGGLGLSEADAAaiygaYTALVYLTPLLGGWLADRLLGQRRAILLGGILMALGHFL 102
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 116 LTLSVTIPGikppecsttnvencekasvlqlavFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKtqklSFFNWWMF 195
Cdd:COG3104 103 LALPGGVTL------------------------FYLGLALIAVGNGLFKPNISSLVGQLYDPGDPRRD----AGFTIFYM 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 196 SIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHK-LPTGSPFTKMARVI-VASFRKANAPMTHD 273
Cdd:COG3104 155 GINIGAFLAPLLCGYLGEKYGWHYGFGAAAIGMLIGLIIFLLGRKYLGDIgLEPDNPLSKKERLIaVALGALLLVLVLAG 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 274 ITSFHELPSLEYERKGAFPIhptpsLRFLDRASLKTGtnhkwnlctttevEETKQMLRMLPVLFITFVPSMMLAQINT-- 351
Cdd:COG3104 235 LLSNANIANYLLYVIAIIAY-----FIFILRSKKLTK-------------EERKRLLAILILFLFSIVFWALYEQAGTsl 296
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 352 -LFVKQGTtlDRKVTGsFSIPPASlsgFVTLSMLISIVLyDRVFVKITRKFTGNPRGITLLQRMGIGLIF---HILIMIV 427
Cdd:COG3104 297 nLFADRNV--DRSLFG-FEIPPSW---FQSLNPLFIIIL-APVFAALWTKLGKRGKEPSTPTKFALGLLLlglGFLVMAL 369
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 428 ASvteryrlKVAADHGLIHqtgvklpltIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFM 507
Cdd:COG3104 370 AA-------LLAGAGGKVS---------PLWLVLAYLLLTIGELCLSPVGLSMITKLAPARFAGQMMGLWFLATALGNLL 433

                ....
gi 15237370 508 SSFL 511
Cdd:COG3104 434 AGLL 437
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
48-432 3.04e-22

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 100.99  E-value: 3.04e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370    48 YYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMVLTLSVTIPGIKP 127
Cdd:TIGR00926   3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   128 PECSTTnvencekasvlqlavffgaLYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFANTV 207
Cdd:TIGR00926  83 LHDLLD-------------------LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTII 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   208 LVYVQDNVG-------WTLGYGLPTLGLAISITIFLLGTPFYRHKLPTGSPFTKMARVIVASFRKANApmthditsfhel 280
Cdd:TIGR00926 144 TPILRGDVGcfgcqdcYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFS------------ 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   281 psleyERKGAFPIHptpslrFLDRASLKTGTNhkwnlctttEVEETKQMLRMLpVLFITFVpsMMLA---QINTLFVKQG 357
Cdd:TIGR00926 212 -----TRSEHWPLH------WLDYAKDKHDIR---------MIRSTKRLLRVL-VLFIPLP--MFWAlfdQQGSRWTLQA 268
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15237370   358 TTLDRKVtGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNprgITLLQRMGIGLIFHILIMIVASVTE 432
Cdd:TIGR00926 269 TRMDGDV-GGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQ 339
MFS_SLC15A1 cd17412
Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute ...
36-507 1.61e-21

Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 1 (SLC15A1), also called peptide transporter 1 (PepT1), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A1, as well as SLC15A2, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1 is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. It is a high-capacity/low-affinity transporter that drives the transport of di-and tripeptides for metabolic purposes. It's expression is upregulated in the colon during chronic inflammation associated with inflammatory bowel disease. SLC15A1/PepT1 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340970 [Multi-domain]  Cd Length: 415  Bit Score: 97.22  E-value: 1.61e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  36 FVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMV 115
Cdd:cd17412   6 FIVVNEFCERFSYYGMRAVLVLYFKYFLRWDDDLSTAIYHTFVALCYLTPILGAIIADSWLGKFKTIVYLSIVYTIGQAV 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 116 LTLSVTipgikpPECSTTNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDvfDPKEKtQKLSFFNWWMF 195
Cdd:cd17412  86 MAVSAI------HDLTDANRDGTPDNLTLHVALSMIGLLLIALGTGGIKPCVAAFGGDQFE--EHQEK-QRSRFFSIFYL 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 196 SIFFGTLFAN--TVLVYVQDNVGWT------LGYGLPTLGLAISITIFLLGTPFYrhklptgspftkmarvivasfrkan 267
Cdd:cd17412 157 SINAGSLLSTiiTPILRSQECGIHSkqkcypLAFGVPAALMVVALIVFILGSKMY------------------------- 211
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 268 apmthditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteveetKQMLRMLPVLFITFVPSMMLA 347
Cdd:cd17412 212 -----------------------------------------------------------KQIKMVLKVLFLYIPLPMFWA 232
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 348 ---QINTLFVKQGTTLDRKVtGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNprgITLLQRMGIGLIFHILI 424
Cdd:cd17412 233 lfdQQGSRWTLQATTMDGNF-GAIQIQPDQMQTVNPILIIIMVPIFDAVIYPLIKKCKIN---FTPLRKMTVGMFLAALA 308
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 425 MIVASVTEryrlkvaadhglihqtgVKLPLTIfallPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIG 504
Cdd:cd17412 309 FVAAALLQ-----------------IQMAWQI----PQYFLLTCGEVVFSVTGLEFSYSQAPSNMKSVLQAGWLLTVAVG 367

                ...
gi 15237370 505 NFM 507
Cdd:cd17412 368 NII 370
MFS_PTR2 cd17350
Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide ...
30-495 1.79e-19

Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide transporter or permease PTR2 is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. It is a 12-transmembrane domain (TMD) integral membrane protein that translocates di-/tripeptides. As with other POT family proteins, it displays characteristic substrate multispecificity. PTR2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340908 [Multi-domain]  Cd Length: 438  Bit Score: 91.38  E-value: 1.79e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  30 RWKaCSFVVVYEVFERMAYYGISSNLFIYMTTKL-----------HQGTVKSSNNVTNWvgtSWLTPILGAYVGDALLGR 98
Cdd:cd17350   1 PWS-AFLIAIVELCERFSYYGLTGPFQNYMQFGPddstpgalglgEQGATGLSNFFTFW---CYVTPVIGAYVADQFLGR 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  99 YITFVISCAIYFSGMMVLTLSvTIPgikppecsttNVENCEKAsvlqLAVFFGALYTLAIGTGGTKPNISTIGADQFD-- 176
Cdd:cd17350  77 YNTIVCGAVIYFVGILILTCT-SIP----------SVIDAGAG----LGGFVVAIIIIGLGTGGIKSNVSPLIADQLPki 141
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 177 -------------VFDPKEKTQKLSFFNWWMFSIFFGTLFANTvlvYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYR 243
Cdd:cd17350 142 kpyvktlkngervIVDPVVTLSRIYMIFYWAINVGSLSLLATT---YLERTKGFWYAYLLPLCVFVIPLIILAFGKKFYK 218
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 244 HKlptgspftkmarvivasfrkanapmthditsfhelpsleyerkgafPIHptpslrFLDraslktgtnhkwnlctttev 323
Cdd:cd17350 219 IR----------------------------------------------PDL------FID-------------------- 226
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 324 eETKQMLRMLPVLFITFVPSMMLAQINTLFVKQGTTLDrkvtgSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTG 403
Cdd:cd17350 227 -ELKRALRACKVFLFYPIYWVCYGQMTSNFISQAGQMQ-----LHGVPNDLFQAFDSIALIIFIPILENIIYPLLRKYNI 300
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 404 NPRGITllqRMGIGLIFHILIMIVASVTER--YRLKVAADHGLIHQTGVklPLTIFALLPQFVLMGMADSFLEVAKLEFF 481
Cdd:cd17350 301 PFKPIT---RITLGFMFASFSMIYAAVLQAkiYQAGPCYANPTGTCSPN--DIHVWIQIPAYVLIAFSEIFASITGLEYA 375
                       490
                ....*....|....
gi 15237370 482 YDQAPESMKSLGTS 495
Cdd:cd17350 376 YTKAPPSMKSFITA 389
MFS_SLC15A2 cd17411
Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute ...
35-505 2.48e-18

Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 2 (SLC15A2), also called peptide transporter 2 (PepT2), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A2, as well as SLC15A1, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A2 is a high-affinity transporter and is abundantly expressed in the apical membrane of kidney proximal tubules and choroid plexus epithelial cells. It is the major transporter involved in the reclamation of peptide-bound amino acids and peptide-like drugs in the kidney, and is also called the renal isoform. In choroid plexus and the brain, it acts as an efflux transporter and plays a role in regulating peptide/neuropeptide homeostasis. SLC15A2/PepT2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340969 [Multi-domain]  Cd Length: 403  Bit Score: 87.19  E-value: 2.48e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  35 SFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMM 114
Cdd:cd17411   5 AFIVVNEFCERFSYYGMKAVLTLYFLSFLHWDENLSTAIYHAFSGLCYFTPVLGALIADSWLGKFKTIIYLSIVYVVGHV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 115 VLTLSvTIPGIKppecsttnvencekASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQklsFFNWWM 194
Cdd:cd17411  85 IKSVG-AIPTVG--------------DQQVHVVLSMIGLFLIALGTGGIKPCVAAFGGDQFEEEHARERSK---FFSIFY 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 195 FSIFFGTLFANTVLVYVQDNVG------WTLGYGLPTLGLAISITIFLLGTPFYRhklptgspftkmarvivasfrkana 268
Cdd:cd17411 147 LSINAGSLISTFVTPILRGDVQcfggdcYALAFGVPAALMVVALVVFIAGSGMYK------------------------- 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 269 pmthditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteveETKQMLRmlpVLFItFVPSMMLAq 348
Cdd:cd17411 202 --------------------------------------------------------EVKMVTR---VLFL-YIPLPMFW- 220
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 349 inTLFVKQGTTLDRKVT------GSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNprgITLLQRMGIGLIFHI 422
Cdd:cd17411 221 --ALFDQQGSRWTLQATrmndfgGGFVLQPDQMQTLNPLLILVFIPIFDLGIYPLVSKCKIN---FTSLRKMATGMILAA 295
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 423 LIMIVASVTEryrLKVAADhglihqtgvklpltifalLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLA 502
Cdd:cd17411 296 LAFAVAAAVE---IKIAWQ------------------LPQYVLLSAGEVMFSITGLEFSYSQAPASMKSVLQAGWLLTVA 354

                ...
gi 15237370 503 IGN 505
Cdd:cd17411 355 FGN 357
MFS_DtpA_like cd17346
Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily ...
41-260 3.43e-17

Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters; The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340904 [Multi-domain]  Cd Length: 399  Bit Score: 83.78  E-value: 3.43e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  41 EVFERMAYYGISSNLFIYMTTKLHQGTVKSSNN--VTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMVLTL 118
Cdd:cd17346  11 EMWERFSYYGMRAILILYLTAQLGDGFSEADAAsiYGAYTALVYLTPIIGGWLADKVLGARRTVFIGGILMALGYLLLAL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 119 SVTIPGIkppecsttnvencekasvlqlavFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQklsffnwwmFSIF 198
Cdd:cd17346  91 SPFSVSM-----------------------LYLGLALIIVGNGLFKPNISSLVGKLYDENDPRRDSG---------FSIF 138
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15237370 199 F-----GTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKLptgspftKMARVIV 260
Cdd:cd17346 139 YmginlGAFLAPLLCGTLGDNYGYHYGFGLAAVGMLLGLLIFLLGRKKLLERK-------KMLAIII 198
MFS_SLC15A5 cd17349
Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute ...
37-544 2.42e-14

Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 5 (SLC15A5) is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. The specific function of SLC15A5 is unknown. SLC15A5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340907 [Multi-domain]  Cd Length: 437  Bit Score: 75.17  E-value: 2.42e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  37 VVVYEVFERMAYYGISSNLFIYMTTKL----HQGTVKSsnnvTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSG 112
Cdd:cd17349   7 LLLVELCERFTFFGIVCNMILFCTIKLgyrnHQAAIVN----LCFVGTSTLTPVFVGWLAEECMGRNKLVYICLFLHFLG 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 113 MMVLTLsVTIP------GIKPPECSTTNVEncekasvlQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEktqK 186
Cdd:cd17349  83 TALLPV-VAFPfedfyiDTHHIIHTLAKRE--------QTLLFYVALLTASLGTGGIRAIVCPLSAYGLQDYGSRK---L 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 187 LSFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAIS-ITIFLlgtpfyrhklptgspftKMARVIvasfrk 265
Cdd:cd17349 151 MSFFNWFYWLVNLNSAVVFVGISYIQQSVAKNLGFLIPFMSVLMAlITLHM-----------------VRNDLI------ 207
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 266 anapmthditsfhelpsleyerkgafpihptpslrfldraslktgtnhkwnlcttteveETKQMLRMLPVLFITFVPSMM 345
Cdd:cd17349 208 -----------------------------------------------------------NTKNLVRLFPLFAFQILYRTC 228
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 346 LAQINTLFVKQGTTLDRKVTGsFSIPPASLSGFVTLSMLISIVLYDRVFvkiTRKFTGNPRGITLLQRMGIGLIFHILIM 425
Cdd:cd17349 229 IMQIPSGYYLQTMNSNLNLGG-FLLPIAAMNVISIIPLLILAPFLEYFS---SCLFSSKRYGPFLSACIIAGHLCAALSV 304
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370 426 IVASVTERYR-LKVAADHGLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIG 504
Cdd:cd17349 305 MVAGFSEIHRkRFPLVEQTLSGKVLLVSSMPCFQLAPQYVLLGVAEALVTPACSLITFRLVPSSIRGISMHFLTLFNGAG 384
                       490       500       510       520
                ....*....|....*....|....*....|....*....|
gi 15237370 505 NFMSSFLLSTVSEITkkrGRGWILNNLNESRLDYYYLFFA 544
Cdd:cd17349 385 CFMGALLIQLVYLIS---EGNWFPNTLNKGNLERFFFFLA 421
PRK15462 PRK15462
dipeptide permease;
32-244 7.08e-13

dipeptide permease;


Pssm-ID: 237971 [Multi-domain]  Cd Length: 493  Bit Score: 71.13  E-value: 7.08e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   32 KACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFS 111
Cdd:PRK15462   9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  112 GMMVLTLSVTIPgikppecsttnvencekasvlqlAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQklsffn 191
Cdd:PRK15462  89 GHVVLGASEIHP-----------------------SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGG------ 139
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 15237370  192 wwmFSIFF-----GTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRH 244
Cdd:PRK15462 140 ---FSLMYaagnvGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTH 194
yjdL_sub1_fam TIGR00924
amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes ...
41-244 4.87e-12

amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273342 [Multi-domain]  Cd Length: 475  Bit Score: 68.32  E-value: 4.87e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370    41 EVFERMAYYGISSNLFIYM--TTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMVLTL 118
Cdd:TIGR00924  19 ELWERFSYYGMQGILAVYLvqQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   119 SVtipgikppecsttnvencekasvlQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFnwwMFSIF 198
Cdd:TIGR00924  99 SI------------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLF---YMSIN 151
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 15237370   199 FGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRH 244
Cdd:TIGR00924 152 IGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRD 197
PRK10207 PRK10207
dipeptide/tripeptide permease DtpB;
41-237 1.24e-05

dipeptide/tripeptide permease DtpB;


Pssm-ID: 182306  Cd Length: 489  Bit Score: 47.89  E-value: 1.24e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370   41 EVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVIscaiyfsGMMVLTLSV 120
Cdd:PRK10207  23 ELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL-------GAIVLAIGY 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237370  121 TIPGIkppecsttnvencekaSVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQklsfFNWWMFSIFFG 200
Cdd:PRK10207  96 FMTGM----------------SLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGA----FTLFYMSINIG 155
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 15237370  201 TLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLL 237
Cdd:PRK10207 156 SLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFA 192
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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