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Conserved domains on  [gi|15238107|ref|NP_198970|]
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Disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]

Protein Classification

disease resistance family protein( domain architecture ID 1000118)

disease resistance family protein similar to Nicotiana glutinosa TMV resistance protein N; resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein

Gene Ontology:  GO:0006952

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
 1-900 0e+00

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 864.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107     1 MALSSSSSNIRRYHVFPSFHGPDVRKGFLSHLHYHFASKGITTFKDQEIEKGNTIGPELVNAIRESRVSIVLLSKKYASS 80
Cdd:PLN03210    1 MASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107    81 SWCLDELVEILKCKEDQGQIVMTIFYDVDPSSVRKQKGDFGSTFMKTCEGKSEEVKQRWTKALTHVANIKGEHSLNWANE 160
Cdd:PLN03210   81 SWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   161 ADMIQKIATDVSTKLSVTPSRDFEGMVGLEAHLTKLNSLLCFEGDDVKMIGIWGPAGIGKSTIARALYNQLSSSFQLKCF 240
Cdd:PLN03210  161 AKMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVF 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   241 MGNL----KGSLKSIVGVDHYEFQKSLQKLLLAKILNQGDMRVHNLAAIKEWLQDQRVLIILDDVDDLEQLEVLAKELSW 316
Cdd:PLN03210  241 IDRAfiskSMEIYSSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQW 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   317 FGSGSRIIVATEDKKILKEHGINDIYHVDFPSMEEALEILCLSAFKQSSVPDGFEELAKKVVHLCGNLPLGLSIVGSSLR 396
Cdd:PLN03210  321 FGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLR 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   397 GESKHEWELQLPRIEASLDGKIESILKVGYERLS-KKNQSLFLHIACFFNYRSVDYVTVMLADSNLDVRNGLKTLADKCF 475
Cdd:PLN03210  401 GRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSL 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   476 VHISINgwIVMHHHLLQQLGRQIVLEQSDEPGKRQFLIEAEEIRAVLTDETGTGSVIGISYNTSNIGEVSVSKGAFEGMR 555
Cdd:PLN03210  481 IHVRED--IVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMR 558

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   556 NLRFLRIFNYLFSGK--CTLQIPEDMEYLPP-LRLLHWDRYPRKSLPTKFQPERLLELHMPHSNLEKLWGGIQPLPNIKS 632
Cdd:PLN03210  559 NLLFLKFYTKKWDQKkeVRWHLPEGFDYLPPkLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRN 638

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   633 IDLSFSIRLKEIPNLSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGCEKLRVIPTNINLASLEVVRMNYCSRLR 712
Cdd:PLN03210  639 IDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLK 718

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   713 RFPDISSNIKTLSVGNTKIENFPPSVagswsRLARL------EIGSRSL--------KILTHAPQSIISLNLSN-SDIRR 777
Cdd:PLN03210  719 SFPDISTNISWLDLDETAIEEFPSNL-----RLENLdelilcEMKSEKLwervqpltPLMTMLSPSLTRLFLSDiPSLVE 793

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   778 IPDCVISLPYLVELIVENCRKLVTIPA----------------------------------------LPPWLES------ 811
Cdd:PLN03210  794 LPSSIQNLHKLEHLEIENCINLETLPTginleslesldlsgcsrlrtfpdistnisdlnlsrtgieeVPWWIEKfsnlsf 873

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   812 LNANKCASLKRV-----------------CCSF------GNPTILT-----------------FYNCLKLDEEArrgIIM 851
Cdd:PLN03210  874 LDMNGCNNLQRVslnisklkhletvdfsdCGALteaswnGSPSEVAmatdnihsklpstvcinFINCFNLDQEA---LLQ 950

                         970       980       990      1000      1010
                  ....*....|....*....|....*....|....*....|....*....|.
gi 15238107   852 QQPVDEYICLPGKEIPAEFSHKAVGNSIT-IPLAPGTFLAS-SRYKACFVI 900
Cdd:PLN03210  951 QQSIFKQLILSGEEVPSYFTHRTTGASLTnIPLLHISPCQPfFRFRACAVV 1001
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1-900 0e+00

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 864.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107     1 MALSSSSSNIRRYHVFPSFHGPDVRKGFLSHLHYHFASKGITTFKDQEIEKGNTIGPELVNAIRESRVSIVLLSKKYASS 80
Cdd:PLN03210    1 MASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107    81 SWCLDELVEILKCKEDQGQIVMTIFYDVDPSSVRKQKGDFGSTFMKTCEGKSEEVKQRWTKALTHVANIKGEHSLNWANE 160
Cdd:PLN03210   81 SWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   161 ADMIQKIATDVSTKLSVTPSRDFEGMVGLEAHLTKLNSLLCFEGDDVKMIGIWGPAGIGKSTIARALYNQLSSSFQLKCF 240
Cdd:PLN03210  161 AKMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVF 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   241 MGNL----KGSLKSIVGVDHYEFQKSLQKLLLAKILNQGDMRVHNLAAIKEWLQDQRVLIILDDVDDLEQLEVLAKELSW 316
Cdd:PLN03210  241 IDRAfiskSMEIYSSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQW 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   317 FGSGSRIIVATEDKKILKEHGINDIYHVDFPSMEEALEILCLSAFKQSSVPDGFEELAKKVVHLCGNLPLGLSIVGSSLR 396
Cdd:PLN03210  321 FGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLR 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   397 GESKHEWELQLPRIEASLDGKIESILKVGYERLS-KKNQSLFLHIACFFNYRSVDYVTVMLADSNLDVRNGLKTLADKCF 475
Cdd:PLN03210  401 GRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSL 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   476 VHISINgwIVMHHHLLQQLGRQIVLEQSDEPGKRQFLIEAEEIRAVLTDETGTGSVIGISYNTSNIGEVSVSKGAFEGMR 555
Cdd:PLN03210  481 IHVRED--IVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMR 558

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   556 NLRFLRIFNYLFSGK--CTLQIPEDMEYLPP-LRLLHWDRYPRKSLPTKFQPERLLELHMPHSNLEKLWGGIQPLPNIKS 632
Cdd:PLN03210  559 NLLFLKFYTKKWDQKkeVRWHLPEGFDYLPPkLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRN 638

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   633 IDLSFSIRLKEIPNLSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGCEKLRVIPTNINLASLEVVRMNYCSRLR 712
Cdd:PLN03210  639 IDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLK 718

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   713 RFPDISSNIKTLSVGNTKIENFPPSVagswsRLARL------EIGSRSL--------KILTHAPQSIISLNLSN-SDIRR 777
Cdd:PLN03210  719 SFPDISTNISWLDLDETAIEEFPSNL-----RLENLdelilcEMKSEKLwervqpltPLMTMLSPSLTRLFLSDiPSLVE 793

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   778 IPDCVISLPYLVELIVENCRKLVTIPA----------------------------------------LPPWLES------ 811
Cdd:PLN03210  794 LPSSIQNLHKLEHLEIENCINLETLPTginleslesldlsgcsrlrtfpdistnisdlnlsrtgieeVPWWIEKfsnlsf 873

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   812 LNANKCASLKRV-----------------CCSF------GNPTILT-----------------FYNCLKLDEEArrgIIM 851
Cdd:PLN03210  874 LDMNGCNNLQRVslnisklkhletvdfsdCGALteaswnGSPSEVAmatdnihsklpstvcinFINCFNLDQEA---LLQ 950

                         970       980       990      1000      1010
                  ....*....|....*....|....*....|....*....|....*....|.
gi 15238107   852 QQPVDEYICLPGKEIPAEFSHKAVGNSIT-IPLAPGTFLAS-SRYKACFVI 900
Cdd:PLN03210  951 QQSIFKQLILSGEEVPSYFTHRTTGASLTnIPLLHISPCQPfFRFRACAVV 1001
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 13-178 1.05e-62

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 210.30  E-value: 1.05e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107     13 YHVFPSFHGPDVRKGFLSHLHYHFASKGITTFKD-QEIEKGNTIGPELVNAIRESRVSIVLLSKKYASSSWCLDELVEIL 91
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDdRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107     92 KCKEDQGQIVMTIFYDVDPSSVRKQKGDFGSTFMKTCEGKSEEVKQRWTKALTHVANIkgEHSLNWANEADMIQKIATDV 171
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158


                   ....*..
gi 15238107    172 STKLSVT 178
Cdd:pfam01582  159 SNKLNGT 165
TIR smart00255
Toll - interleukin 1 - resistance;
12-149 9.83e-39

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 140.92  E-value: 9.83e-39
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107      12 RYHVFPSFHG-PDVRKGFLSHLHYHFASKGITTFKDQEIEKGNtIGPELVNAIRESRVSIVLLSKKYASSSWCLDELVEI 90
Cdd:smart00255    1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGG-DLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15238107      91 LKCKEDQGQI-VMTIFYDVDPSSVRKQKGDFGSTFMKTCEGKSEEVK-QRWTKALTHVANI 149
Cdd:smart00255   80 LENALEEGGLrVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKeQFWKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
624-813 1.52e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 80.36  E-value: 1.52e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  624 IQPLPNIKSIDLSfsirlkEIPNLSNATNLETLNLTHCKtLVELPSSISNLHKLKKLKMSGCeKLRVIPTNI-NLASLEV 702
Cdd:COG4886   92 LGDLTNLTELDLS------GNEELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNN-QLTDLPEPLgNLTNLKS 163

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  703 VRMNYCsRLRRFPD-IS--SNIKTLSVGNTKIENFPPSVagswSRLARLEigsrslkilthapqsiiSLNLSNSDIRRIP 779
Cdd:COG4886  164 LDLSNN-QLTDLPEeLGnlTNLKELDLSNNQITDLPEPL----GNLTNLE-----------------ELDLSGNQLTDLP 221

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 15238107  780 DCVISLPYLVELIVENCrKLVTIPALP--PWLESLN 813
Cdd:COG4886  222 EPLANLTNLETLDLSNN-QLTDLPELGnlTNLEELD 256
AAA cd00009
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ...
 212-327 2.20e-03

The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.


Pssm-ID: 99707 [Multi-domain]  Cd Length: 151  Bit Score: 39.82  E-value: 2.20e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  212 IWGPAGIGKSTIARALYNQLSSSFqlkcfmgnlkgslKSIVGVDHYEFqksLQKLLLAKIlnQGDMRVHNLAAIKEwlQD 291
Cdd:cd00009   24 LYGPPGTGKTTLARAIANELFRPG-------------APFLYLNASDL---LEGLVVAEL--FGHFLVRLLFELAE--KA 83

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 15238107  292 QRVLIILDDVDDL------EQLEVLAKELSW--FGSGSRIIVAT 327
Cdd:cd00009   84 KPGVLFIDEIDSLsrgaqnALLRVLETLNDLriDRENVRVIGAT 127
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1-900 0e+00

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 864.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107     1 MALSSSSSNIRRYHVFPSFHGPDVRKGFLSHLHYHFASKGITTFKDQEIEKGNTIGPELVNAIRESRVSIVLLSKKYASS 80
Cdd:PLN03210    1 MASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107    81 SWCLDELVEILKCKEDQGQIVMTIFYDVDPSSVRKQKGDFGSTFMKTCEGKSEEVKQRWTKALTHVANIKGEHSLNWANE 160
Cdd:PLN03210   81 SWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   161 ADMIQKIATDVSTKLSVTPSRDFEGMVGLEAHLTKLNSLLCFEGDDVKMIGIWGPAGIGKSTIARALYNQLSSSFQLKCF 240
Cdd:PLN03210  161 AKMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVF 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   241 MGNL----KGSLKSIVGVDHYEFQKSLQKLLLAKILNQGDMRVHNLAAIKEWLQDQRVLIILDDVDDLEQLEVLAKELSW 316
Cdd:PLN03210  241 IDRAfiskSMEIYSSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQW 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   317 FGSGSRIIVATEDKKILKEHGINDIYHVDFPSMEEALEILCLSAFKQSSVPDGFEELAKKVVHLCGNLPLGLSIVGSSLR 396
Cdd:PLN03210  321 FGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLR 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   397 GESKHEWELQLPRIEASLDGKIESILKVGYERLS-KKNQSLFLHIACFFNYRSVDYVTVMLADSNLDVRNGLKTLADKCF 475
Cdd:PLN03210  401 GRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSL 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   476 VHISINgwIVMHHHLLQQLGRQIVLEQSDEPGKRQFLIEAEEIRAVLTDETGTGSVIGISYNTSNIGEVSVSKGAFEGMR 555
Cdd:PLN03210  481 IHVRED--IVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMR 558

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   556 NLRFLRIFNYLFSGK--CTLQIPEDMEYLPP-LRLLHWDRYPRKSLPTKFQPERLLELHMPHSNLEKLWGGIQPLPNIKS 632
Cdd:PLN03210  559 NLLFLKFYTKKWDQKkeVRWHLPEGFDYLPPkLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRN 638

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   633 IDLSFSIRLKEIPNLSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGCEKLRVIPTNINLASLEVVRMNYCSRLR 712
Cdd:PLN03210  639 IDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLK 718

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   713 RFPDISSNIKTLSVGNTKIENFPPSVagswsRLARL------EIGSRSL--------KILTHAPQSIISLNLSN-SDIRR 777
Cdd:PLN03210  719 SFPDISTNISWLDLDETAIEEFPSNL-----RLENLdelilcEMKSEKLwervqpltPLMTMLSPSLTRLFLSDiPSLVE 793

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   778 IPDCVISLPYLVELIVENCRKLVTIPA----------------------------------------LPPWLES------ 811
Cdd:PLN03210  794 LPSSIQNLHKLEHLEIENCINLETLPTginleslesldlsgcsrlrtfpdistnisdlnlsrtgieeVPWWIEKfsnlsf 873

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107   812 LNANKCASLKRV-----------------CCSF------GNPTILT-----------------FYNCLKLDEEArrgIIM 851
Cdd:PLN03210  874 LDMNGCNNLQRVslnisklkhletvdfsdCGALteaswnGSPSEVAmatdnihsklpstvcinFINCFNLDQEA---LLQ 950

                         970       980       990      1000      1010
                  ....*....|....*....|....*....|....*....|....*....|.
gi 15238107   852 QQPVDEYICLPGKEIPAEFSHKAVGNSIT-IPLAPGTFLAS-SRYKACFVI 900
Cdd:PLN03210  951 QQSIFKQLILSGEEVPSYFTHRTTGASLTnIPLLHISPCQPfFRFRACAVV 1001
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 13-178 1.05e-62

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 210.30  E-value: 1.05e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107     13 YHVFPSFHGPDVRKGFLSHLHYHFASKGITTFKD-QEIEKGNTIGPELVNAIRESRVSIVLLSKKYASSSWCLDELVEIL 91
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDdRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107     92 KCKEDQGQIVMTIFYDVDPSSVRKQKGDFGSTFMKTCEGKSEEVKQRWTKALTHVANIkgEHSLNWANEADMIQKIATDV 171
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158


                   ....*..
gi 15238107    172 STKLSVT 178
Cdd:pfam01582  159 SNKLNGT 165
TIR smart00255
Toll - interleukin 1 - resistance;
12-149 9.83e-39

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 140.92  E-value: 9.83e-39
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107      12 RYHVFPSFHG-PDVRKGFLSHLHYHFASKGITTFKDQEIEKGNtIGPELVNAIRESRVSIVLLSKKYASSSWCLDELVEI 90
Cdd:smart00255    1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGG-DLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15238107      91 LKCKEDQGQI-VMTIFYDVDPSSVRKQKGDFGSTFMKTCEGKSEEVK-QRWTKALTHVANI 149
Cdd:smart00255   80 LENALEEGGLrVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKeQFWKKALYAVPSK 140
NB-ARC pfam00931
NB-ARC domain;
189-404 8.95e-23

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 98.61  E-value: 8.95e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107    189 LEAHLTKLNSLLcFEGDDVKMIGIWGPAGIGKSTIARALYNQLSSsfqlkcfmgnLKGSLKSIVGV-DHYEFQKS-LQKL 266
Cdd:pfam00931    1 REDMVEKVIGKL-SEKDEPGIVGIHGMGGVGKTTLAAQIFNDFDE----------VEGHFDSVAWVvVSKTFTIStLQQT 69

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107    267 LLAKILNQGD----MRVHNLAA-IKEWLQDQRVLIILDDVDDLEQLEVLAKELSWFGSGSRIIVATEDKKILKEHG-IND 340
Cdd:pfam00931   70 ILQNLGLSEDdwdnKEEGELARkIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVGgPSD 149

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15238107    341 IYHVDFPSMEEALEILCLSAF-KQSSVPDGFEELAKKVVHLCGNLPLGLSIVGSSLRGES-KHEWE 404
Cdd:pfam00931  150 PHEVELLEPDEAWELFENKVFpKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCKKtVEEWK 215
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
624-813 1.52e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 80.36  E-value: 1.52e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  624 IQPLPNIKSIDLSfsirlkEIPNLSNATNLETLNLTHCKtLVELPSSISNLHKLKKLKMSGCeKLRVIPTNI-NLASLEV 702
Cdd:COG4886   92 LGDLTNLTELDLS------GNEELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNN-QLTDLPEPLgNLTNLKS 163

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  703 VRMNYCsRLRRFPD-IS--SNIKTLSVGNTKIENFPPSVagswSRLARLEigsrslkilthapqsiiSLNLSNSDIRRIP 779
Cdd:COG4886  164 LDLSNN-QLTDLPEeLGnlTNLKELDLSNNQITDLPEPL----GNLTNLE-----------------ELDLSGNQLTDLP 221

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 15238107  780 DCVISLPYLVELIVENCrKLVTIPALP--PWLESLN 813
Cdd:COG4886  222 EPLANLTNLETLDLSNN-QLTDLPELGnlTNLEELD 256
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
602-797 2.01e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 79.98  E-value: 2.01e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  602 FQPERLLELHMPHSNLEKLWGGIQPLPNIKSIDLSFSiRLKEIPN-LSNATNLETLNLTHCKtLVELPSSISNLHKLKKL 680
Cdd:COG4886  110 SNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNN-QLTDLPEpLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKEL 187

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  681 KMSGCeKLRVIPTNI-NLASLEVVRMNYCsRLRRFPD-IS--SNIKTLSVGNTKIENFPpsvagSWSRLARLEigsrslk 756
Cdd:COG4886  188 DLSNN-QITDLPEPLgNLTNLEELDLSGN-QLTDLPEpLAnlTNLETLDLSNNQLTDLP-----ELGNLTNLE------- 253

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 15238107  757 ilthapqsiiSLNLSNSDIRRIPDCvISLPYLVELIVENCR 797
Cdd:COG4886  254 ----------ELDLSNNQLTDLPPL-ANLTNLKTLDLSNNQ 283
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
 15-101 1.64e-09

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 56.55  E-value: 1.64e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107     15 VFPSFHGPDvrKGFLSHLHYHFASKGITTFKDQ-EIEKGNTIGPELVNAIRESRVSIVLLSKKYASSSWCLDELVEILKC 93
Cdd:pfam13676    1 VFISYAGED--RAWAEWLADALEAAGYRVWLDRwDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALAD 78


                   ....*...
gi 15238107     94 KEDQGQIV 101
Cdd:pfam13676   79 PEGRKRLI 86
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
550-684 5.31e-08

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 56.48  E-value: 5.31e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  550 AFEGMRNLRFLRIFNYLFSGkctlqIPEDMEYLPPLRLLHWDRYPRKSLPTKF-QPERLLELHMPHSNLEKLWGGIQPLP 628
Cdd:COG4886  154 PLGNLTNLKSLDLSNNQLTD-----LPEELGNLTNLKELDLSNNQITDLPEPLgNLTNLEELDLSGNQLTDLPEPLANLT 228

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 15238107  629 NIKSIDLSFSiRLKEIPNLSNATNLETLNLTHCKtLVELPSSiSNLHKLKKLKMSG 684
Cdd:COG4886  229 NLETLDLSNN-QLTDLPELGNLTNLEELDLSNNQ-LTDLPPL-ANLTNLKTLDLSN 281
PLN03194 PLN03194
putative disease resistance protein; Provisional
 5-114 1.54e-06

putative disease resistance protein; Provisional


Pssm-ID: 215626 [Multi-domain]  Cd Length: 187  Bit Score: 49.82  E-value: 1.54e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107     5 SSSSNIRRYHVFPSFHGPDVRKGFLSHLHYHFASKGITTFKDQEIEK-GNTIGPELVNAIRESRVSIVLLSKKYASSSWC 83
Cdd:PLN03194   19 SSSSSAKPCDVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDNKNMKpGDKLFDKINSAIRNCKVGVAVFSPRYCESYFC 98

                          90       100       110
                  ....*....|....*....|....*....|.
gi 15238107    84 LDELVEILKCKEDqgqiVMTIFYDVDPSSVR 114
Cdd:PLN03194   99 LHELALIMESKKR----VIPIFCDVKPSQLR 125
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
615-812 1.58e-06

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 51.86  E-value: 1.58e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  615 SNLEKLWGGIQPLPNIKSIDLSFSIRLKEIPNLSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGCEKLRviptn 694
Cdd:COG4886   36 ALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELS----- 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  695 iNLASLEVVRMNYCsRLRRFPD-ISS--NIKTLSVGNTKIENFPPSVAGswsrLARLEigsrslkilthapqsiiSLNLS 771
Cdd:COG4886  111 -NLTNLESLDLSGN-QLTDLPEeLANltNLKELDLSNNQLTDLPEPLGN----LTNLK-----------------SLDLS 167

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 15238107  772 NSDIRRIPDCVISLPYLVELIVENCRklvtIPALPPWLESL 812
Cdd:COG4886  168 NNQLTDLPEELGNLTNLKELDLSNNQ----ITDLPEPLGNL 204
AAA smart00382
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ...
 208-338 7.46e-06

ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.


Pssm-ID: 214640 [Multi-domain]  Cd Length: 148  Bit Score: 46.98  E-value: 7.46e-06
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107     208 KMIGIWGPAGIGKSTIARALYNQLSSSfqlkcfmgnlKGSLKSIVGVDHYEFQKSLQKLLLAKILNQGDMRVHNLAAIKE 287
Cdd:smart00382    3 EVILIVGPPGSGKTTLARALARELGPP----------GGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLALA 72

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15238107     288 WLQDQRV-LIILDDVDDL----------EQLEVLAKELSWFGSGSRIIVATEDKKILKEHGI 338
Cdd:smart00382   73 LARKLKPdVLILDEITSLldaeqealllLLEELRLLLLLKSEKNLTVILTTNDEKDLGPALL 134
LRR_3 pfam07725
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ...
 607-625 6.53e-05

Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.


Pssm-ID: 429621 [Multi-domain]  Cd Length: 20  Bit Score: 40.78  E-value: 6.53e-05
                           10
                   ....*....|....*....
gi 15238107    607 LLELHMPHSNLEKLWGGIQ 625
Cdd:pfam07725    2 LVELNMPYSKLEKLWEGVK 20
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
212-327 1.88e-04

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 45.57  E-value: 1.88e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  212 IWGPAGIGKSTIARALYNQLSSSFQLKC-----FMgnlkgSLKSIVGvdhyefQKSLQKLLLAKILNQGDmrvHNLAAIK 286
Cdd:COG5635  185 ILGEPGSGKTTLLRYLALELAERYLDAEdpipiLI-----ELRDLAE------EASLEDLLAEALEKRGG---EPEDALE 250

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 15238107  287 EWLQDQRVLIILDDVD---DLEQLEVLAKELSWFGS---GSRIIVAT 327
Cdd:COG5635  251 RLLRNGRLLLLLDGLDevpDEADRDEVLNQLRRFLErypKARVIITS 297
AAA cd00009
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ...
 212-327 2.20e-03

The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.


Pssm-ID: 99707 [Multi-domain]  Cd Length: 151  Bit Score: 39.82  E-value: 2.20e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107  212 IWGPAGIGKSTIARALYNQLSSSFqlkcfmgnlkgslKSIVGVDHYEFqksLQKLLLAKIlnQGDMRVHNLAAIKEwlQD 291
Cdd:cd00009   24 LYGPPGTGKTTLARAIANELFRPG-------------APFLYLNASDL---LEGLVVAEL--FGHFLVRLLFELAE--KA 83

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 15238107  292 QRVLIILDDVDDL------EQLEVLAKELSW--FGSGSRIIVAT 327
Cdd:cd00009   84 KPGVLFIDEIDSLsrgaqnALLRVLETLNDLriDRENVRVIGAT 127
AAA_16 pfam13191
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ...
 187-315 2.81e-03

AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.


Pssm-ID: 433025 [Multi-domain]  Cd Length: 167  Bit Score: 39.79  E-value: 2.81e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107    187 VGLEAHLTKLNSLLC--FEGDdVKMIGIWGPAGIGKSTIARALYNQLSSS----FQLKCfmgnlkgslksivgVDHYEFQ 260
Cdd:pfam13191    3 VGREEELEQLLDALDrvRSGR-PPSVLLTGEAGTGKTTLLRELLRALERDggyfLRGKC--------------DENLPYS 67

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238107    261 KSLQKL----LLAKILNQGDMRVHNL--AAIKEWLQ---------------------------DQRVLIILDDVD----- 302
Cdd:pfam13191   68 PLLEALtregLLRQLLDELESSLLEAwrAALLEALApvpelpgdlaerlldlllrlldllargERPLVLVLDDLQwadea 147

                          170
                   ....*....|...
gi 15238107    303 DLEQLEVLAKELS 315
Cdd:pfam13191  148 SLQLLAALLRLLE 160
PRK13342 PRK13342
recombination factor protein RarA; Reviewed
 181-235 6.09e-03

recombination factor protein RarA; Reviewed


Pssm-ID: 237355 [Multi-domain]  Cd Length: 413  Bit Score: 40.45  E-value: 6.09e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 15238107   181 RDFEGMVGLEaHLTKLNSLL--CFEGDDV-KMIgIWGPAGIGKSTIARALYNQLSSSF 235
Cdd:PRK13342    9 KTLDEVVGQE-HLLGPGKPLrrMIEAGRLsSMI-LWGPPGTGKTTLARIIAGATDAPF 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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