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Conserved domains on  [gi|15241719|ref|NP_198753|]
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Curculin-like (mannose-binding) lectin family protein [Arabidopsis thaliana]

Protein Classification

lectin domain-containing protein( domain architecture ID 11118299)

lectin domain-containing protein binds carbohydrates; may be a partial G-type lectin S-receptor-like serine/threonine-protein kinase lacking the protein kinase domain

Gene Ontology:  GO:0030246
PubMed:  11522393

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
B_lectin pfam01453
D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well ...
 10-115 1.76e-37

D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.


:

Pssm-ID: 460217  Cd Length: 105  Bit Score: 122.98  E-value: 1.76e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241719    10 VVWVANRDTPVSKPIGTLKILNN-NLHLIDHTSNSVWSTQVTSQSLKSeLTAELLDNGNLVLRYSNNNETsgFLWQSFGF 88
Cdd:pfam01453   2 VVWVANRDNPINDSSGVLTISNDgNLVLLNGSNSVVWSTNNSSSSANN-TVAQLLDSGNLVLSDDSNSGN--VLWQSFDH 78

                          90       100
                  ....*....|....*....|....*..
gi 15241719    89 PTDTLLHDMKVGWDKKSGLNRILQSWK 115
Cdd:pfam01453  79 PTDTLLPGMKLGWNKRTGLNRRLTSWK 105
 
Name Accession Description Interval E-value
B_lectin pfam01453
D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well ...
 10-115 1.76e-37

D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.


Pssm-ID: 460217  Cd Length: 105  Bit Score: 122.98  E-value: 1.76e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241719    10 VVWVANRDTPVSKPIGTLKILNN-NLHLIDHTSNSVWSTQVTSQSLKSeLTAELLDNGNLVLRYSNNNETsgFLWQSFGF 88
Cdd:pfam01453   2 VVWVANRDNPINDSSGVLTISNDgNLVLLNGSNSVVWSTNNSSSSANN-TVAQLLDSGNLVLSDDSNSGN--VLWQSFDH 78

                          90       100
                  ....*....|....*....|....*..
gi 15241719    89 PTDTLLHDMKVGWDKKSGLNRILQSWK 115
Cdd:pfam01453  79 PTDTLLPGMKLGWNKRTGLNRRLTSWK 105
B_lectin cd00028
Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat ...
 1-89 1.54e-17

Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.


Pssm-ID: 237995  Cd Length: 116  Bit Score: 72.34  E-value: 1.54e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241719   1 MWYRKLPNEVVWVANRDTPVSkPIGTLKILNN-NLHLIDHTSNSVWSTQVTSQslKSELTAELLDNGNLVLRYSNNNets 79
Cdd:cd00028  34 ILYKGSSRTVVWVANRDNPSG-SSCTLTLQSDgNLVIYDGSGTVVWSSNTTRV--NGNYVLVLLDDGNLVLYDSDGN--- 107

                        90
                ....*....|
gi 15241719  80 gFLWQSFGFP 89
Cdd:cd00028 108 -FLWQSFDYP 116
B_lectin smart00108
Bulb-type mannose-specific lectin;
1-86 1.20e-16

Bulb-type mannose-specific lectin;


Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 70.03  E-value: 1.20e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241719      1 MWYRKLPNEVVWVANRDTPVSKPiGTLKILNN-NLHLIDHTSNSVWSTQVTSQslKSELTAELLDNGNLVLRYSNNNets 79
Cdd:smart00108  33 ILYKSSSRTVVWVANRDNPVSDS-CTLTLQSDgNLVLYDGDGRVVWSSNTTGA--NGNYVLVLLDDGNLVIYDSDGN--- 106


                   ....*..
gi 15241719     80 gFLWQSF 86
Cdd:smart00108 107 -FLWQSF 112
 
Name Accession Description Interval E-value
B_lectin pfam01453
D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well ...
 10-115 1.76e-37

D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.


Pssm-ID: 460217  Cd Length: 105  Bit Score: 122.98  E-value: 1.76e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241719    10 VVWVANRDTPVSKPIGTLKILNN-NLHLIDHTSNSVWSTQVTSQSLKSeLTAELLDNGNLVLRYSNNNETsgFLWQSFGF 88
Cdd:pfam01453   2 VVWVANRDNPINDSSGVLTISNDgNLVLLNGSNSVVWSTNNSSSSANN-TVAQLLDSGNLVLSDDSNSGN--VLWQSFDH 78

                          90       100
                  ....*....|....*....|....*..
gi 15241719    89 PTDTLLHDMKVGWDKKSGLNRILQSWK 115
Cdd:pfam01453  79 PTDTLLPGMKLGWNKRTGLNRRLTSWK 105
B_lectin cd00028
Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat ...
 1-89 1.54e-17

Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.


Pssm-ID: 237995  Cd Length: 116  Bit Score: 72.34  E-value: 1.54e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241719   1 MWYRKLPNEVVWVANRDTPVSkPIGTLKILNN-NLHLIDHTSNSVWSTQVTSQslKSELTAELLDNGNLVLRYSNNNets 79
Cdd:cd00028  34 ILYKGSSRTVVWVANRDNPSG-SSCTLTLQSDgNLVIYDGSGTVVWSSNTTRV--NGNYVLVLLDDGNLVLYDSDGN--- 107

                        90
                ....*....|
gi 15241719  80 gFLWQSFGFP 89
Cdd:cd00028 108 -FLWQSFDYP 116
B_lectin smart00108
Bulb-type mannose-specific lectin;
1-86 1.20e-16

Bulb-type mannose-specific lectin;


Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 70.03  E-value: 1.20e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15241719      1 MWYRKLPNEVVWVANRDTPVSKPiGTLKILNN-NLHLIDHTSNSVWSTQVTSQslKSELTAELLDNGNLVLRYSNNNets 79
Cdd:smart00108  33 ILYKSSSRTVVWVANRDNPVSDS-CTLTLQSDgNLVLYDGDGRVVWSSNTTGA--NGNYVLVLLDDGNLVIYDSDGN--- 106


                   ....*..
gi 15241719     80 gFLWQSF 86
Cdd:smart00108 107 -FLWQSF 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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