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Conserved domains on  [gi|240256134|ref|NP_195039|]
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rho GTPase-activating protein [Arabidopsis thaliana]

Protein Classification

Lzipper-MIP1 domain-containing protein( domain architecture ID 10627533)

Lzipper-MIP1 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Lzipper-MIP1 pfam14389
Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus ...
 90-166 2.22e-23

Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,


:

Pssm-ID: 464163 [Multi-domain]  Cd Length: 82  Bit Score: 89.15  E-value: 2.22e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 240256134   90 WYKCELEQDIKRLQQQLQEEINLRLALTSAVEHSS-SPFMDSPCELPDKAQELLDSLAILEITVSKLEQESVSLRYLL 166
Cdd:pfam14389   4 EKRSSLEQEVEQLQEQLQDEEDLRRALEKALSNSPdGSLPSLSSLLPPKAKELLAEIAVLEAEVARLEQKLLSLYRKL 81
 
Name Accession Description Interval E-value
Lzipper-MIP1 pfam14389
Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus ...
 90-166 2.22e-23

Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,


Pssm-ID: 464163 [Multi-domain]  Cd Length: 82  Bit Score: 89.15  E-value: 2.22e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 240256134   90 WYKCELEQDIKRLQQQLQEEINLRLALTSAVEHSS-SPFMDSPCELPDKAQELLDSLAILEITVSKLEQESVSLRYLL 166
Cdd:pfam14389   4 EKRSSLEQEVEQLQEQLQDEEDLRRALEKALSNSPdGSLPSLSSLLPPKAKELLAEIAVLEAEVARLEQKLLSLYRKL 81
 
Name Accession Description Interval E-value
Lzipper-MIP1 pfam14389
Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus ...
 90-166 2.22e-23

Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,


Pssm-ID: 464163 [Multi-domain]  Cd Length: 82  Bit Score: 89.15  E-value: 2.22e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 240256134   90 WYKCELEQDIKRLQQQLQEEINLRLALTSAVEHSS-SPFMDSPCELPDKAQELLDSLAILEITVSKLEQESVSLRYLL 166
Cdd:pfam14389   4 EKRSSLEQEVEQLQEQLQDEEDLRRALEKALSNSPdGSLPSLSSLLPPKAKELLAEIAVLEAEVARLEQKLLSLYRKL 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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