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Conserved domains on  [gi|15237038|ref|NP_194456|]
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Auxin-responsive GH3 family protein [Arabidopsis thaliana]

Protein Classification

GH3 auxin-responsive promoter family protein( domain architecture ID 10010842)

GH3 auxin-responsive promoter family protein such as Arabidopsis thaliana jasmonic acid-amido synthetase JAR1 and indole-3-acetic acid-amido synthetase GH3.10, which catalyze the synthesis of jasmonates-amino acid conjugates and indole-3-acetic acid (IAA)-amino acid conjugates, respectively

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02620 PLN02620
indole-3-acetic acid-amido synthetase
 1-612 0e+00

indole-3-acetic acid-amido synthetase


:

Pssm-ID: 166261  Cd Length: 612  Bit Score: 1337.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038    1 MPEAPKKESLEVFDLTLDQKNKQKLQLIEELTSNADQVQRQVLEEILTRNADVEYLRRHDLNGRTDRETFKNIMPVITYE 80
Cdd:PLN02620   1 MPEAPKNSLLEVGDYNLAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   81 DIEPEINRIANGDKSPILSSKPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMSQFVPGLENGKGMYFLFIK 160
Cdd:PLN02620  81 DIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  161 SESKTPGGLPARPVLTSYYKSSHFKERPYDPYTNYTSPNETILCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAI 240
Cdd:PLN02620 161 SEAKTPGGLVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  241 KFLEKHWIELVRDIRTGTLSSLITDPSVREAVAKILKPSPKLADFVEFECKKSSWQGIITRLWPNTKYVDVIVTGTMSQY 320
Cdd:PLN02620 241 RFLEKHWTLLCRDIRTGTIDSQITDPSVREAVMKILKPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQY 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  321 IPTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPVHRNNGVTNSINLPKALTEKEQQELVD 400
Cdd:PLN02620 321 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVD 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  401 LVDVKLGQEYELVVTTYAGLCRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDAS 480
Cdd:PLN02620 401 LVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAS 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  481 LSEYTSYADTSSIPGHYVLFWELCLDGNTPIPPSVFEDCCLAVEESFNTVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 560
Cdd:PLN02620 481 LTEYTSYADTSTIPGHYVLFWELCLNGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 560

                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|..
gi 15237038  561 AISLGASINQYKTPRCVKFAPIIELLNSRVVDSYFSPKCPKWVPGHKQWGSN 612
Cdd:PLN02620 561 AISLGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCPKWVPGHKQWCSN 612
 
Name Accession Description Interval E-value
PLN02620 PLN02620
indole-3-acetic acid-amido synthetase
 1-612 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 166261  Cd Length: 612  Bit Score: 1337.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038    1 MPEAPKKESLEVFDLTLDQKNKQKLQLIEELTSNADQVQRQVLEEILTRNADVEYLRRHDLNGRTDRETFKNIMPVITYE 80
Cdd:PLN02620   1 MPEAPKNSLLEVGDYNLAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   81 DIEPEINRIANGDKSPILSSKPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMSQFVPGLENGKGMYFLFIK 160
Cdd:PLN02620  81 DIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  161 SESKTPGGLPARPVLTSYYKSSHFKERPYDPYTNYTSPNETILCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAI 240
Cdd:PLN02620 161 SEAKTPGGLVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  241 KFLEKHWIELVRDIRTGTLSSLITDPSVREAVAKILKPSPKLADFVEFECKKSSWQGIITRLWPNTKYVDVIVTGTMSQY 320
Cdd:PLN02620 241 RFLEKHWTLLCRDIRTGTIDSQITDPSVREAVMKILKPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQY 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  321 IPTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPVHRNNGVTNSINLPKALTEKEQQELVD 400
Cdd:PLN02620 321 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVD 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  401 LVDVKLGQEYELVVTTYAGLCRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDAS 480
Cdd:PLN02620 401 LVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAS 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  481 LSEYTSYADTSSIPGHYVLFWELCLDGNTPIPPSVFEDCCLAVEESFNTVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 560
Cdd:PLN02620 481 LTEYTSYADTSTIPGHYVLFWELCLNGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 560

                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|..
gi 15237038  561 AISLGASINQYKTPRCVKFAPIIELLNSRVVDSYFSPKCPKWVPGHKQWGSN 612
Cdd:PLN02620 561 AISLGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCPKWVPGHKQWCSN 612
GH3 pfam03321
GH3 auxin-responsive promoter;
28-579 0e+00

GH3 auxin-responsive promoter;


Pssm-ID: 460885  Cd Length: 531  Bit Score: 763.29  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038    28 IEELTSNADQVQRQVLEEILTRNADVEYLRRHDLNGRTDRETFKNIMPVITYEDIEPEINRIANGdKSPILSSKPISEFL 107
Cdd:pfam03321   2 FEKLTKNAAEVQEEVLREILKRNANTEYGKRHGFGEIKSAEDFKKRVPIVTYEDLEPYIERIANG-EPNILTSDPITWFA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   108 TSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMSQFVpglENGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKER 187
Cdd:pfam03321  81 LSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMPRYF---YKGKALYFLYVPEEGKTPGGLPAGPASTSYYKSDPFLLK 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   188 PydpytNYTSPNETILCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAIKFLEKHWIELVRDIRTGTLSSLI-TDP 266
Cdd:pfam03321 158 R-----LYTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWEELCEDIRTGTLSNVInTDP 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   267 SVREAVAK-ILKPSPKLADFVEFECKKSsWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYF 345
Cdd:pfam03321 233 SLRLALSKrLLGPNPELADELEEECEKG-WKGIVPRLWPNLKYVFCIGTGSMAPYIPKLRHYFGGLPLVSEGYAASEGFF 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   346 GVNLRPLCKPsEVSYTLIPSMAYFEFLPVHRNNGvtnsinlpkaltEKEQQELVDLVDVKLGQEYELVVTTYAGLCRYRV 425
Cdd:pfam03321 312 GINLDPLCPP-DVSYTLLPNSAYFEFIPVEEDED------------EEENPETLDLVEVEVGKEYELVVTTYAGLYRYRI 378

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   426 GDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLvpFDASLSEYTSYADTS-SIPGHYVLFWELc 504
Cdd:pfam03321 379 GDVVRVTGFYNQAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAAKEL--TGAELVDFTSYADTSeSIPGHYVLFWEL- 455

                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15237038   505 ldgNTPIPPSVFEDCCLAVEESF---NTVYRQGRvSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKF 579
Cdd:pfam03321 456 ---KDEPDLEVLEEFCKVLDESLqedNSDYRAKR-KDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVNS 529
 
Name Accession Description Interval E-value
PLN02620 PLN02620
indole-3-acetic acid-amido synthetase
 1-612 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 166261  Cd Length: 612  Bit Score: 1337.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038    1 MPEAPKKESLEVFDLTLDQKNKQKLQLIEELTSNADQVQRQVLEEILTRNADVEYLRRHDLNGRTDRETFKNIMPVITYE 80
Cdd:PLN02620   1 MPEAPKNSLLEVGDYNLAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   81 DIEPEINRIANGDKSPILSSKPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMSQFVPGLENGKGMYFLFIK 160
Cdd:PLN02620  81 DIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  161 SESKTPGGLPARPVLTSYYKSSHFKERPYDPYTNYTSPNETILCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAI 240
Cdd:PLN02620 161 SEAKTPGGLVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  241 KFLEKHWIELVRDIRTGTLSSLITDPSVREAVAKILKPSPKLADFVEFECKKSSWQGIITRLWPNTKYVDVIVTGTMSQY 320
Cdd:PLN02620 241 RFLEKHWTLLCRDIRTGTIDSQITDPSVREAVMKILKPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQY 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  321 IPTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPVHRNNGVTNSINLPKALTEKEQQELVD 400
Cdd:PLN02620 321 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVD 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  401 LVDVKLGQEYELVVTTYAGLCRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDAS 480
Cdd:PLN02620 401 LVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAS 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  481 LSEYTSYADTSSIPGHYVLFWELCLDGNTPIPPSVFEDCCLAVEESFNTVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 560
Cdd:PLN02620 481 LTEYTSYADTSTIPGHYVLFWELCLNGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 560

                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|..
gi 15237038  561 AISLGASINQYKTPRCVKFAPIIELLNSRVVDSYFSPKCPKWVPGHKQWGSN 612
Cdd:PLN02620 561 AISLGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCPKWVPGHKQWCSN 612
PLN02247 PLN02247
indole-3-acetic acid-amido synthetase
 21-604 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 165890  Cd Length: 606  Bit Score: 857.32  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   21 NKQKLQLIEELTSNADQVQRQVLEEILTRNADVEYLRRHdLNGRTDRETFKNIMPVITYEDIEPEINRIANGDKSPILSS 100
Cdd:PLN02247  10 NEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSF-LDGESDKQSFKNKVPVVNYEDIKPCIERIANGESSSIISA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  101 KPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMSQFVPGLENGKGMYFLFIKSESKTPGGLPARPVLTSYYK 180
Cdd:PLN02247  89 QPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSYYK 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  181 SSHFKERPYDPYTNYTSPNETILCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAIKFLEKHWIELVRDIRTGTLS 260
Cdd:PLN02247 169 SSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGCVS 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  261 SLITDPSVREAVAKIL-KPSPKLADFVEFECKKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYA 339
Cdd:PLN02247 249 DWITDPSCRNAVSSILsKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYA 328

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  340 SSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPVHRNNG-----VTNSINLPKALTEKEQQELVDLVDVKLGQEYELVV 414
Cdd:PLN02247 329 SSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNNGevihfVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVV 408

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  415 TTYAGLCRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDASLSEYTSYADTSSIP 494
Cdd:PLN02247 409 TTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTSSIP 488

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  495 GHYVLFWELCLDGNTPIP---PSVFEDCCLAVEESFNTVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQY 571
Cdd:PLN02247 489 GHYVLFWELKTRGSNDPPeldPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQY 568

                        570       580       590
                 ....*....|....*....|....*....|...
gi 15237038  572 KTPRCVKFAPIIELLNSRVVDSYFSPKCPKWVP 604
Cdd:PLN02247 569 KTPRCIKSEEALKILDSRVIGRFFSKRVPFWEP 601
PLN02249 PLN02249
indole-3-acetic acid-amido synthetase
 16-608 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 177891  Cd Length: 597  Bit Score: 856.27  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   16 TLDQKNKQKLQLIEELTSNADQVQRQVLEEILTRNADVEYLRRHDLNGRTDRETFKNIMPVITYEDIEPEINRIANGDKS 95
Cdd:PLN02249  15 TTSEKDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVTYEDLKTEIQRISNGDRS 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   96 PILSSKPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMSQFVPGLENGKGMYFLFIKSESKTPGGLPARPVL 175
Cdd:PLN02249  95 PILSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMPVMNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPAL 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  176 TSYYKSSHFKERPYDpyTNYTSPNETILCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAIKFLEKHWIELVRDIR 255
Cdd:PLN02249 175 TSYYKSDHFRTSDYD--NVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDIS 252

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  256 TGTLSSLITDPSVREAVAKIL-KPSPKLADFVEFECKKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLV 334
Cdd:PLN02249 253 TGTLSSKIFDPAIKNRMSKILnKPDQELAEFLIGVCSQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMA 332

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  335 CTMYASSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPvHRNNGvtnsinlPKALtekEQQELVDLVDVKLGQEYELVV 414
Cdd:PLN02249 333 STIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLP-HNHDG-------DGAL---DETSLVELADVEVGKEYELVI 401

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  415 TTYAGLCRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDASLSEYTSYADTSSIP 494
Cdd:PLN02249 402 TTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIP 481

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038  495 GHYVLFWELCLDGNTPIPPS--VFEDCCLAVEESFNTVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYK 572
Cdd:PLN02249 482 GHYVIYWELLGRDQSNALPSdeVMAKCCLEMEESLNSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYK 561

                        570       580       590
                 ....*....|....*....|....*....|....*.
gi 15237038  573 TPRCVKFAPIIELLNSRVVDSYFSPKCPKWVPGHKQ 608
Cdd:PLN02249 562 VPRCVSLTPIMELLDSRVVSAHFSPSLPHWSPERRH 597
GH3 pfam03321
GH3 auxin-responsive promoter;
28-579 0e+00

GH3 auxin-responsive promoter;


Pssm-ID: 460885  Cd Length: 531  Bit Score: 763.29  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038    28 IEELTSNADQVQRQVLEEILTRNADVEYLRRHDLNGRTDRETFKNIMPVITYEDIEPEINRIANGdKSPILSSKPISEFL 107
Cdd:pfam03321   2 FEKLTKNAAEVQEEVLREILKRNANTEYGKRHGFGEIKSAEDFKKRVPIVTYEDLEPYIERIANG-EPNILTSDPITWFA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   108 TSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMSQFVpglENGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKER 187
Cdd:pfam03321  81 LSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMPRYF---YKGKALYFLYVPEEGKTPGGLPAGPASTSYYKSDPFLLK 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   188 PydpytNYTSPNETILCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAIKFLEKHWIELVRDIRTGTLSSLI-TDP 266
Cdd:pfam03321 158 R-----LYTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWEELCEDIRTGTLSNVInTDP 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   267 SVREAVAK-ILKPSPKLADFVEFECKKSsWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYF 345
Cdd:pfam03321 233 SLRLALSKrLLGPNPELADELEEECEKG-WKGIVPRLWPNLKYVFCIGTGSMAPYIPKLRHYFGGLPLVSEGYAASEGFF 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   346 GVNLRPLCKPsEVSYTLIPSMAYFEFLPVHRNNGvtnsinlpkaltEKEQQELVDLVDVKLGQEYELVVTTYAGLCRYRV 425
Cdd:pfam03321 312 GINLDPLCPP-DVSYTLLPNSAYFEFIPVEEDED------------EEENPETLDLVEVEVGKEYELVVTTYAGLYRYRI 378

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237038   426 GDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLvpFDASLSEYTSYADTS-SIPGHYVLFWELc 504
Cdd:pfam03321 379 GDVVRVTGFYNQAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAAKEL--TGAELVDFTSYADTSeSIPGHYVLFWEL- 455

                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15237038   505 ldgNTPIPPSVFEDCCLAVEESF---NTVYRQGRvSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKF 579
Cdd:pfam03321 456 ---KDEPDLEVLEEFCKVLDESLqedNSDYRAKR-KDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVNS 529
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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