|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
1-414 |
3.19e-166 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 527.14 E-value: 3.19e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1 MAASFCGSRR--YDVFPSFSKVDVRRSFLAHLLKELDRRLINTFTDHGMERNLPIDAELLSAIAESRISIVIFSKNYASS 78
Cdd:PLN03210 1 MASSSSSSRNwvYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 79 TWCLDELVEIHTCYKELAQIVVPVFFNVHPSQVKKQTGEFGKVFGKTCKGKPENRKLRWMQALAAVANIAGYDLQNWPDE 158
Cdd:PLN03210 81 SWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 159 AVMIEMVADDVSKKL-FKSSNDFSDIVGIEAHLEAMSSILRLKSEKARMVGISGPSGIGKTTIAKALFSKLSPQFHL--- 234
Cdd:PLN03210 161 AKMIEEIANDVLGKLnLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSsvf 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 235 --RAFVT-----YKRTNQDDYDMKLCWIEKFLSEILGQKDLKVLDLGAVEQSLMHKKVLIILDDVDDLELLKTLVGQTGW 307
Cdd:PLN03210 241 idRAFISksmeiYSSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQW 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 308 FGFGSRIVVITQDRQLLKAHDINLIYEVAFPSAHLALEIFCQSAFGKIYPPSDFRELSVEFAYLAGNLPLDLRVLGLAMK 387
Cdd:PLN03210 321 FGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLR 400
|
410 420
....*....|....*....|....*..
gi 240256009 388 GKHREEWIEMLPRLRNDLDGKFKKTLR 414
Cdd:PLN03210 401 GRDKEDWMDMLPRLRNGLDGKIEKTLR 427
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
581-1291 |
1.64e-96 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 336.08 E-value: 1.64e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 581 VFSCHDNLDVDETsFIEAISKELHKQGFIPLTYNLLGR-ENLDEEMLYG---SRVGIMILSSSYVSSRQSLDHLVAVMEH 656
Cdd:PLN03210 15 VFPSFSGEDVRIT-FLSHFLKELDRKLIIAFKDNEIERsQSLDPELKQAirdSRIAVVVFSKNYASSSWCLNELLEIVRC 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 657 WKTTDLVIIPIYFKVRLSDICGLKGRFEAAFLQLHMSLQEDRVQKWKAAMSEIVSI-GGHEWTKGSQFILAEEVVRNASL 735
Cdd:PLN03210 94 KEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANIlGYHSQNWPNEAKMIEEIANDVLG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 736 RLYLKSSKN---LLGI------LALLNHSQSTDVEIMGIWGIAGIGKTSIAREIFELHAPHYDFCYFLQDFHLMCQMKRP 806
Cdd:PLN03210 174 KLNLTPSNDfedFVGIedhiakMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAFISKSMEIY 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 807 RQ-----------LREDFISKLFGEE----KGLGAsdvkpsfMRDWFHKKTILLVLDDVSNARDAEAVIGGFGWFSHGHR 871
Cdd:PLN03210 254 SSanpddynmklhLQRAFLSEILDKKdikiYHLGA-------MEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSR 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 872 IILTSRSKQVLVQCKVKKPYEIQKLSDFESFR-LCKQYL------DGENPVISELISCSSGIPLALKLLVSSVSKQYITN 944
Cdd:PLN03210 327 IIVITKDKHFLRAHGIDHIYEVCLPSNELALEmFCRSAFkknsppDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKED 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 945 MKDHLQSLRKDPPTQIQEAFRRSFDGL-DENEKNIFLDLACFFRGQSKDYAVLLLDACGFFTYMGICELIDESLISLVDN 1023
Cdd:PLN03210 407 WMDMLPRLRNGLDGKIEKTLRVSYDGLnNKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRED 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1024 KIEMPIPFQDMGRIIVHEEDEDPCERSRLWDSKDIVDVLTNNSGTEAIEGIFLDAsDLTCEL--SPTVFGKMYNLRLLKF 1101
Cdd:PLN03210 487 IVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDI-DEIDELhiHENAFKGMRNLLFLKF 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1102 YCSTSGNQCKLT--LPHGLDTLPDELSLLHWENYPLVYLPQKFNPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSR 1179
Cdd:PLN03210 566 YTKKWDQKKEVRwhLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSK 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1180 ELTDILMLSEALNLEHIDLEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAP 1259
Cdd:PLN03210 646 NLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDIST 725
|
730 740 750
....*....|....*....|....*....|....
gi 240256009 1260 NLEEIYLAGTSIRELP--LSIRNLTELVTLDLEN 1291
Cdd:PLN03210 726 NISWLDLDETAIEEFPsnLRLENLDELILCEMKS 759
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
11-173 |
9.83e-55 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 187.96 E-value: 9.83e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 11 YDVFPSFSKVDVRRSFLAHLLKELDRRLINTFTDhgmERNL----PIDAELLSAIAESRISIVIFSKNYASSTWCLDELV 86
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFID---DRDLepgeAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 87 EIHTCYKELAQIVVPVFFNVHPSQVKKQTGEFGKVFGKTCKGKPENRKLRWMQALAAVANIagYDLQNWPDEAVMIEMVA 166
Cdd:pfam01582 78 KILECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIA 155
|
....*..
gi 240256009 167 DDVSKKL 173
Cdd:pfam01582 156 YDISNKL 162
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
10-147 |
6.58e-37 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 135.91 E-value: 6.58e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 10 RYDVFPSFS-KVDVRRSFLAHLLKELDRRLINTFTDHGMERNLPIDaELLSAIAESRISIVIFSKNYASSTWCLDELVEI 88
Cdd:smart00255 1 EYDVFISYSgKEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLE-EIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 240256009 89 HTCYKE-LAQIVVPVFFNVHPSQVKKQTGEFGKVFGKTCKGKPENRKLR-WMQALAAVANI 147
Cdd:smart00255 80 LENALEeGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKEQfWKKALYAVPSK 140
|
|
| ALOG_dom |
pfam04852 |
ALOG domain; The 125-residue ALOG (Arabidopsis LSH1 and oryza G1) domain is rich in basic ... |
496-571 |
1.83e-14 |
|
ALOG domain; The 125-residue ALOG (Arabidopsis LSH1 and oryza G1) domain is rich in basic amino acids, especially arginine, and is highly conserved among land plants. Members of the ALOG family of proteins function as key developmental regulators. It has been proposed that the ALOG domain originated from the N-terminal DNA-binding domains of integrases belonging to the tyrosine recombinase superfamily encoded by a distinct type of DIRS1-like LTR retrotransposon found in several eukaryotes. Secondary structure predictions revealed an all-alpha helical domain with four conserved helices. Some proteins known to contain an ALOG domain are Arabidopsis thaliana LIGHT_DEPENDENT SHORT HYPOCOTYLS1 (LSH1),involved in phytochrome- dependent light signalling; Oryza G1, involved in the specification of sterile lemma identity and Plant defence proteins.
Pssm-ID: 398493 Cd Length: 126 Bit Score: 71.27 E-value: 1.83e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 496 DWCSFCEFLRNRIPPLNPFKCSANDVIDFLR------------------------------TRQVLGSTEALVDRLIFSS 545
Cdd:pfam04852 21 DWNTFCQYLRNHRPPLNLSRCSGAHVLEFLRyldqfgktkvhipgcpffgqpnppapctcpLRQAWGSLDALIGRLRAAF 100
|
90 100
....*....|....*....|....*.
gi 240256009 546 EAFGIKPEENPFRSQAVTSYLKAARD 571
Cdd:pfam04852 101 EENGGLPESNPFAARAVRIYLREVRD 126
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1117-1301 |
6.27e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 75.36 E-value: 6.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1117 GLDTLPDELSLLHWENYPLVYLPQKFNPVNLVELNMpySNMEKLWegkkNLEKLKNIKLSHSReLTDI-LMLSEALNLEH 1195
Cdd:COG4886 68 LLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDL--SGNEELS----NLTNLESLDLSGNQ-LTDLpEELANLTNLKE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1196 IDLEGcTSLIDVSMSIPCCGKLVSLNMKDCsRLRSLP-SMVDLTTLKLLNLSGCsefeDIQDFA------PNLEEIYLAG 1268
Cdd:COG4886 141 LDLSN-NQLTDLPEPLGNLTNLKSLDLSNN-QLTDLPeELGNLTNLKELDLSNN----QITDLPeplgnlTNLEELDLSG 214
|
170 180 190
....*....|....*....|....*....|...
gi 240256009 1269 TSIRELPLSIRNLTELVTLDLENCeRLQEMPSL 1301
Cdd:COG4886 215 NQLTDLPEPLANLTNLETLDLSNN-QLTDLPEL 246
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
750-955 |
1.02e-12 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 69.33 E-value: 1.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 750 ALLNH-SQSTDVEIMGIWGIAGIGKTSIAREIFElHAPHYDFCYflqDFHLMCQMKRP---RQLREDFISKLFGEEKGL- 824
Cdd:pfam00931 7 KVIGKlSEKDEPGIVGIHGMGGVGKTTLAAQIFN-DFDEVEGHF---DSVAWVVVSKTftiSTLQQTILQNLGLSEDDWd 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 825 -GASDVKPSFMRDWFHKKTILLVLDDVSNARDAEAVIGGFGWFSHGHRIILTSRSKQVL--VQCKvKKPYEIQKLSDFES 901
Cdd:pfam00931 83 nKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAgrVGGP-SDPHEVELLEPDEA 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 902 FRLCKQYL----DGENPVISEL----ISCSSGIPLALKLLVSSVS--------KQYITNMKDHLQSLRKD 955
Cdd:pfam00931 162 WELFENKVfpktLGECELLEDVakeiVEKCRGLPLALKVLGGLLSckktveewKHVYDVLQSELKSNSYS 231
|
|
| CDC6 |
COG1474 |
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]; |
164-229 |
1.12e-04 |
|
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair];
Pssm-ID: 441083 [Multi-domain] Cd Length: 389 Bit Score: 45.99 E-value: 1.12e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 240256009 164 MVADDVSKK--LFKS----SNDF--SDIVGIEAHLEAMSSILR--LKSEKARMVGISGPSGIGKTTIAKALFSKLS 229
Cdd:COG1474 1 MIFEDLLWDesIFRDrevlSPDYvpDRLPHREEEIEELASALRpaLRGERPSNVLIYGPTGTGKTAVAKYVLEELE 76
|
|
| GMPK |
cd00071 |
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), ... |
209-234 |
1.17e-04 |
|
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and guanosine diphosphate (GDP). It plays an essential role in the biosynthesis of guanosine triphosphate (GTP). This enzyme is also important for the activation of some antiviral and anticancer agents, such as acyclovir, ganciclovir, carbovir, and thiopurines.
Pssm-ID: 238026 Cd Length: 137 Bit Score: 43.29 E-value: 1.17e-04
10 20
....*....|....*....|....*.
gi 240256009 209 ISGPSGIGKTTIAKALFSKLSPQFHL 234
Cdd:cd00071 4 LSGPSGVGKSTLLKRLLEEFDPNFGF 29
|
|
| AMN1 |
cd09293 |
Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in ... |
1166-1295 |
8.27e-03 |
|
Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in Saccharomyces cerevisiae as a component of the Antagonist of MEN pathway (AMEN). The AMEN network is activated by MEN (mitotic exit network) via an active Cdc14, and in turn switches off MEN. Amn1 constitutes one of the alternative mechanisms by which MEN may be disrupted. Specifically, Amn1 binds Tem1 (Termination of M-phase, a GTPase that belongs to the RAS superfamily), and disrupts its association with Cdc15, the primary downstream target. Amn1 is a leucine-rich repeat (LRR) protein, with 12 repeats in the S. cerevisiae ortholog. As a negative regulator of the signal transduction pathway MEN, overexpression of AMN1 slows the growth of wild type cells. The function of the vertebrate members of this family has not been determined experimentally, they have fewer LRRs that determine the extent of this model.
Pssm-ID: 187754 [Multi-domain] Cd Length: 226 Bit Score: 39.23 E-value: 8.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1166 NLEKLKNIKLSHSRELTDILMLSEAL---NLEHIDLEGCTSLID---VSMSIPcCGKLVSLNmkdCSRLRSLPSMVDLTT 1239
Cdd:cd09293 50 NCNKLKKLILPGSKLIDDEGLIALAQscpNLQVLDLRACENITDsgiVALATN-CPKLQTIN---LGRHRNGHLITDVSL 125
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 240256009 1240 LKLLNLSgcsefediqdfaPNLEEIYLAGT-----SIRElpLSIRNLTELVTLDLENCERL 1295
Cdd:cd09293 126 SALGKNC------------TFLQTVGFAGCdvtdkGVWE--LASGCSKSLERLSLNNCRNL 172
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
1-414 |
3.19e-166 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 527.14 E-value: 3.19e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1 MAASFCGSRR--YDVFPSFSKVDVRRSFLAHLLKELDRRLINTFTDHGMERNLPIDAELLSAIAESRISIVIFSKNYASS 78
Cdd:PLN03210 1 MASSSSSSRNwvYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 79 TWCLDELVEIHTCYKELAQIVVPVFFNVHPSQVKKQTGEFGKVFGKTCKGKPENRKLRWMQALAAVANIAGYDLQNWPDE 158
Cdd:PLN03210 81 SWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 159 AVMIEMVADDVSKKL-FKSSNDFSDIVGIEAHLEAMSSILRLKSEKARMVGISGPSGIGKTTIAKALFSKLSPQFHL--- 234
Cdd:PLN03210 161 AKMIEEIANDVLGKLnLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSsvf 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 235 --RAFVT-----YKRTNQDDYDMKLCWIEKFLSEILGQKDLKVLDLGAVEQSLMHKKVLIILDDVDDLELLKTLVGQTGW 307
Cdd:PLN03210 241 idRAFISksmeiYSSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQW 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 308 FGFGSRIVVITQDRQLLKAHDINLIYEVAFPSAHLALEIFCQSAFGKIYPPSDFRELSVEFAYLAGNLPLDLRVLGLAMK 387
Cdd:PLN03210 321 FGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLR 400
|
410 420
....*....|....*....|....*..
gi 240256009 388 GKHREEWIEMLPRLRNDLDGKFKKTLR 414
Cdd:PLN03210 401 GRDKEDWMDMLPRLRNGLDGKIEKTLR 427
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
581-1291 |
1.64e-96 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 336.08 E-value: 1.64e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 581 VFSCHDNLDVDETsFIEAISKELHKQGFIPLTYNLLGR-ENLDEEMLYG---SRVGIMILSSSYVSSRQSLDHLVAVMEH 656
Cdd:PLN03210 15 VFPSFSGEDVRIT-FLSHFLKELDRKLIIAFKDNEIERsQSLDPELKQAirdSRIAVVVFSKNYASSSWCLNELLEIVRC 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 657 WKTTDLVIIPIYFKVRLSDICGLKGRFEAAFLQLHMSLQEDRVQKWKAAMSEIVSI-GGHEWTKGSQFILAEEVVRNASL 735
Cdd:PLN03210 94 KEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANIlGYHSQNWPNEAKMIEEIANDVLG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 736 RLYLKSSKN---LLGI------LALLNHSQSTDVEIMGIWGIAGIGKTSIAREIFELHAPHYDFCYFLQDFHLMCQMKRP 806
Cdd:PLN03210 174 KLNLTPSNDfedFVGIedhiakMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAFISKSMEIY 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 807 RQ-----------LREDFISKLFGEE----KGLGAsdvkpsfMRDWFHKKTILLVLDDVSNARDAEAVIGGFGWFSHGHR 871
Cdd:PLN03210 254 SSanpddynmklhLQRAFLSEILDKKdikiYHLGA-------MEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSR 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 872 IILTSRSKQVLVQCKVKKPYEIQKLSDFESFR-LCKQYL------DGENPVISELISCSSGIPLALKLLVSSVSKQYITN 944
Cdd:PLN03210 327 IIVITKDKHFLRAHGIDHIYEVCLPSNELALEmFCRSAFkknsppDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKED 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 945 MKDHLQSLRKDPPTQIQEAFRRSFDGL-DENEKNIFLDLACFFRGQSKDYAVLLLDACGFFTYMGICELIDESLISLVDN 1023
Cdd:PLN03210 407 WMDMLPRLRNGLDGKIEKTLRVSYDGLnNKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRED 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1024 KIEMPIPFQDMGRIIVHEEDEDPCERSRLWDSKDIVDVLTNNSGTEAIEGIFLDAsDLTCEL--SPTVFGKMYNLRLLKF 1101
Cdd:PLN03210 487 IVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDI-DEIDELhiHENAFKGMRNLLFLKF 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1102 YCSTSGNQCKLT--LPHGLDTLPDELSLLHWENYPLVYLPQKFNPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSR 1179
Cdd:PLN03210 566 YTKKWDQKKEVRwhLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSK 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1180 ELTDILMLSEALNLEHIDLEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAP 1259
Cdd:PLN03210 646 NLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDIST 725
|
730 740 750
....*....|....*....|....*....|....
gi 240256009 1260 NLEEIYLAGTSIRELP--LSIRNLTELVTLDLEN 1291
Cdd:PLN03210 726 NISWLDLDETAIEEFPsnLRLENLDELILCEMKS 759
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
11-173 |
9.83e-55 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 187.96 E-value: 9.83e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 11 YDVFPSFSKVDVRRSFLAHLLKELDRRLINTFTDhgmERNL----PIDAELLSAIAESRISIVIFSKNYASSTWCLDELV 86
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFID---DRDLepgeAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 87 EIHTCYKELAQIVVPVFFNVHPSQVKKQTGEFGKVFGKTCKGKPENRKLRWMQALAAVANIagYDLQNWPDEAVMIEMVA 166
Cdd:pfam01582 78 KILECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIA 155
|
....*..
gi 240256009 167 DDVSKKL 173
Cdd:pfam01582 156 YDISNKL 162
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
10-147 |
6.58e-37 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 135.91 E-value: 6.58e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 10 RYDVFPSFS-KVDVRRSFLAHLLKELDRRLINTFTDHGMERNLPIDaELLSAIAESRISIVIFSKNYASSTWCLDELVEI 88
Cdd:smart00255 1 EYDVFISYSgKEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLE-EIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 240256009 89 HTCYKE-LAQIVVPVFFNVHPSQVKKQTGEFGKVFGKTCKGKPENRKLR-WMQALAAVANI 147
Cdd:smart00255 80 LENALEeGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKEQfWKKALYAVPSK 140
|
|
| ALOG_dom |
pfam04852 |
ALOG domain; The 125-residue ALOG (Arabidopsis LSH1 and oryza G1) domain is rich in basic ... |
496-571 |
1.83e-14 |
|
ALOG domain; The 125-residue ALOG (Arabidopsis LSH1 and oryza G1) domain is rich in basic amino acids, especially arginine, and is highly conserved among land plants. Members of the ALOG family of proteins function as key developmental regulators. It has been proposed that the ALOG domain originated from the N-terminal DNA-binding domains of integrases belonging to the tyrosine recombinase superfamily encoded by a distinct type of DIRS1-like LTR retrotransposon found in several eukaryotes. Secondary structure predictions revealed an all-alpha helical domain with four conserved helices. Some proteins known to contain an ALOG domain are Arabidopsis thaliana LIGHT_DEPENDENT SHORT HYPOCOTYLS1 (LSH1),involved in phytochrome- dependent light signalling; Oryza G1, involved in the specification of sterile lemma identity and Plant defence proteins.
Pssm-ID: 398493 Cd Length: 126 Bit Score: 71.27 E-value: 1.83e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 496 DWCSFCEFLRNRIPPLNPFKCSANDVIDFLR------------------------------TRQVLGSTEALVDRLIFSS 545
Cdd:pfam04852 21 DWNTFCQYLRNHRPPLNLSRCSGAHVLEFLRyldqfgktkvhipgcpffgqpnppapctcpLRQAWGSLDALIGRLRAAF 100
|
90 100
....*....|....*....|....*.
gi 240256009 546 EAFGIKPEENPFRSQAVTSYLKAARD 571
Cdd:pfam04852 101 EENGGLPESNPFAARAVRIYLREVRD 126
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1117-1301 |
6.27e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 75.36 E-value: 6.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1117 GLDTLPDELSLLHWENYPLVYLPQKFNPVNLVELNMpySNMEKLWegkkNLEKLKNIKLSHSReLTDI-LMLSEALNLEH 1195
Cdd:COG4886 68 LLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDL--SGNEELS----NLTNLESLDLSGNQ-LTDLpEELANLTNLKE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1196 IDLEGcTSLIDVSMSIPCCGKLVSLNMKDCsRLRSLP-SMVDLTTLKLLNLSGCsefeDIQDFA------PNLEEIYLAG 1268
Cdd:COG4886 141 LDLSN-NQLTDLPEPLGNLTNLKSLDLSNN-QLTDLPeELGNLTNLKELDLSNN----QITDLPeplgnlTNLEELDLSG 214
|
170 180 190
....*....|....*....|....*....|...
gi 240256009 1269 TSIRELPLSIRNLTELVTLDLENCeRLQEMPSL 1301
Cdd:COG4886 215 NQLTDLPEPLANLTNLETLDLSNN-QLTDLPEL 246
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1135-1301 |
5.04e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 72.66 E-value: 5.04e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1135 LVYLPQKFNPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSReLTDI-LMLSEALNLEHIDLEGCtSLIDVSMSIPC 1213
Cdd:COG4886 103 LSGNEELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQ-LTDLpEPLGNLTNLKSLDLSNN-QLTDLPEELGN 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1214 CGKLVSLNMKDCsRLRSLPSMV-DLTTLKLLNLSGCsEFEDI-QDFA--PNLEEIYLAGTSIRELPlSIRNLTELVTLDL 1289
Cdd:COG4886 181 LTNLKELDLSNN-QITDLPEPLgNLTNLEELDLSGN-QLTDLpEPLAnlTNLETLDLSNNQLTDLP-ELGNLTNLEELDL 257
|
170
....*....|..
gi 240256009 1290 ENCeRLQEMPSL 1301
Cdd:COG4886 258 SNN-QLTDLPPL 268
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
750-955 |
1.02e-12 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 69.33 E-value: 1.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 750 ALLNH-SQSTDVEIMGIWGIAGIGKTSIAREIFElHAPHYDFCYflqDFHLMCQMKRP---RQLREDFISKLFGEEKGL- 824
Cdd:pfam00931 7 KVIGKlSEKDEPGIVGIHGMGGVGKTTLAAQIFN-DFDEVEGHF---DSVAWVVVSKTftiSTLQQTILQNLGLSEDDWd 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 825 -GASDVKPSFMRDWFHKKTILLVLDDVSNARDAEAVIGGFGWFSHGHRIILTSRSKQVL--VQCKvKKPYEIQKLSDFES 901
Cdd:pfam00931 83 nKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAgrVGGP-SDPHEVELLEPDEA 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 902 FRLCKQYL----DGENPVISEL----ISCSSGIPLALKLLVSSVS--------KQYITNMKDHLQSLRKD 955
Cdd:pfam00931 162 WELFENKVfpktLGECELLEDVakeiVEKCRGLPLALKVLGGLLSckktveewKHVYDVLQSELKSNSYS 231
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
1041-1276 |
4.14e-10 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 63.41 E-value: 4.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1041 EEDEDPCERSRLWDSKDIVDVLTNNSGTEAIEGIFLDASDLTCELSPTVFGKMYNLRLLKFYCSTSGNQCK----LTLPH 1116
Cdd:COG4886 43 LSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTnlesLDLSG 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1117 -GLDTLPDELSLLH-------WENyPLVYLPQKF-NPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSReLTDI-LM 1186
Cdd:COG4886 123 nQLTDLPEELANLTnlkeldlSNN-QLTDLPEPLgNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQ-ITDLpEP 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1187 LSEALNLEHIDLEGCTsLIDVSMSIPCCGKLVSLNMKDCsRLRSLPSMVDLTTLKLLNLSGCsEFEDIQDFA--PNLEEI 1264
Cdd:COG4886 201 LGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLDLSNN-QLTDLPELGNLTNLEELDLSNN-QLTDLPPLAnlTNLKTL 277
|
250
....*....|..
gi 240256009 1265 YLAGTSIRELPL 1276
Cdd:COG4886 278 DLSNNQLTDLKL 289
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
581-712 |
7.32e-09 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 56.22 E-value: 7.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 581 VFSCHDNLDVdETSFIEAISKELHKQGFIP--LTYNLLGRENLDEEML---YGSRVGIMILSSSYVSSRQSLDHLVAVME 655
Cdd:pfam01582 3 VFLSFRGSDT-REWFVSHLLKELKQKGIKLfiDDRDLEPGEAIAPELLsaiEKSRRSVVVLSPNYASSGWCLDELVKILE 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 240256009 656 HWKTTDLVIIPIYFKVRLSDICGLKGRFEAAFLQLHMSLQEDRVQKWKAAMSEIVSI 712
Cdd:pfam01582 82 CALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI 138
|
|
| LRR_3 |
pfam07725 |
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ... |
1146-1165 |
1.36e-07 |
|
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.
Pssm-ID: 429621 [Multi-domain] Cd Length: 20 Bit Score: 48.49 E-value: 1.36e-07
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
186-395 |
1.85e-07 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 53.92 E-value: 1.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 186 IEAHLEAMSSILrLKSEKARMVGISGPSGIGKTTIAKALFSKLSP---QFHLRAFVTYKRTNQDDYDMKLCWIEKFLSEI 262
Cdd:pfam00931 1 REDMVEKVIGKL-SEKDEPGIVGIHGMGGVGKTTLAAQIFNDFDEvegHFDSVAWVVVSKTFTISTLQQTILQNLGLSED 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 263 LGQKDLKVLDLGAVEQSLMHKKVLIILDDVDDLELLKTLVGQTGWFGFGSRIVVITQDRQLLKAH-DINLIYEVAFPSAH 341
Cdd:pfam00931 80 DWDNKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVgGPSDPHEVELLEPD 159
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 240256009 342 LALEIFCQSAF-GKIYPPSDFRELSVEFAYLAGNLPLDLRVLGLAMKGKHR-EEWI 395
Cdd:pfam00931 160 EAWELFENKVFpKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCKKTvEEWK 215
|
|
| PLN03194 |
PLN03194 |
putative disease resistance protein; Provisional |
12-112 |
7.45e-06 |
|
putative disease resistance protein; Provisional
Pssm-ID: 215626 [Multi-domain] Cd Length: 187 Bit Score: 47.89 E-value: 7.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 12 DVFPSFSKVDVRRSFLAHLLKELDRRLINTFTDH-GMERNLPIDAELLSAIAESRISIVIFSKNYASSTWCLDELVEIHT 90
Cdd:PLN03194 28 DVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDNkNMKPGDKLFDKINSAIRNCKVGVAVFSPRYCESYFCLHELALIME 107
|
90 100
....*....|....*....|..
gi 240256009 91 CYKElaqiVVPVFFNVHPSQVK 112
Cdd:PLN03194 108 SKKR----VIPIFCDVKPSQLR 125
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
13-104 |
1.48e-05 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 45.38 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 13 VFPSFSKVDvrRSFLAHLLKELDRRLINTFTDhgmERNLP----IDAELLSAIAESRISIVIFSKNYASSTWCLDELVEI 88
Cdd:pfam13676 1 VFISYAGED--RAWAEWLADALEAAGYRVWLD---RWDIRpgddWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAA 75
|
90
....*....|....*.
gi 240256009 89 HtCYKELAQIVVPVFF 104
Cdd:pfam13676 76 L-ADPEGRKRLIPVRL 90
|
|
| CDC6 |
COG1474 |
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]; |
164-229 |
1.12e-04 |
|
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair];
Pssm-ID: 441083 [Multi-domain] Cd Length: 389 Bit Score: 45.99 E-value: 1.12e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 240256009 164 MVADDVSKK--LFKS----SNDF--SDIVGIEAHLEAMSSILR--LKSEKARMVGISGPSGIGKTTIAKALFSKLS 229
Cdd:COG1474 1 MIFEDLLWDesIFRDrevlSPDYvpDRLPHREEEIEELASALRpaLRGERPSNVLIYGPTGTGKTAVAKYVLEELE 76
|
|
| GMPK |
cd00071 |
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), ... |
209-234 |
1.17e-04 |
|
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and guanosine diphosphate (GDP). It plays an essential role in the biosynthesis of guanosine triphosphate (GTP). This enzyme is also important for the activation of some antiviral and anticancer agents, such as acyclovir, ganciclovir, carbovir, and thiopurines.
Pssm-ID: 238026 Cd Length: 137 Bit Score: 43.29 E-value: 1.17e-04
10 20
....*....|....*....|....*.
gi 240256009 209 ISGPSGIGKTTIAKALFSKLSPQFHL 234
Cdd:cd00071 4 LSGPSGVGKSTLLKRLLEEFDPNFGF 29
|
|
| RNA_helicase |
pfam00910 |
RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding ... |
209-281 |
1.90e-04 |
|
RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Pssm-ID: 459992 Cd Length: 102 Bit Score: 41.82 E-value: 1.90e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 240256009 209 ISGPSGIGKTTIAKALFSKLSPQFHLRAFVTYKRTNQDDYdmklcWiekflSEILGQKDLKVLDLGAVEQSLM 281
Cdd:pfam00910 3 LYGPPGCGKSTLAKYLARALLKKLGLPKDSVYSRNPDDDF-----W-----DGYTGQPVVIIDDFGQNPDGPD 65
|
|
| Udk |
COG0572 |
Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway ... |
198-248 |
3.91e-04 |
|
Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway/BioSystem: Pyrimidine salvage
Pssm-ID: 440337 [Multi-domain] Cd Length: 206 Bit Score: 43.29 E-value: 3.91e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 240256009 198 RLKSEKARMVGISGPSGIGKTTIAKALFSKLSPQfhlRAFVtykrTNQDDY 248
Cdd:COG0572 1 AARSGKPRIIGIAGPSGSGKTTFARRLAEQLGAD---KVVV----ISLDDY 44
|
|
| ExeA |
COG3267 |
Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, ... |
187-234 |
4.53e-04 |
|
Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 442498 [Multi-domain] Cd Length: 261 Bit Score: 43.62 E-value: 4.53e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 240256009 187 EAHLEAMSSILRLKSEKARMVGISGPSGIGKTTIAKALFSKLSPQFHL 234
Cdd:COG3267 26 PSHREALARLEYALAQGGGFVVLTGEVGTGKTTLLRRLLERLPDDVKV 73
|
|
| NACHT |
COG5635 |
Predicted NTPase, NACHT family domain [Signal transduction mechanisms]; |
765-935 |
2.03e-03 |
|
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
Pssm-ID: 444362 [Multi-domain] Cd Length: 935 Bit Score: 42.48 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 765 IWGIAGIGKTSIAREIFELHAPHYDFC------YF-LQDFhlmcqmKRPRQLrEDFISKLFGEEKGLGASDVkpsfmRDW 837
Cdd:COG5635 185 ILGEPGSGKTTLLRYLALELAERYLDAedpipiLIeLRDL------AEEASL-EDLLAEALEKRGGEPEDAL-----ERL 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 838 FHKKTILLVLDD---VSNARDAEAVIGGFGWFS---HGHRIILTSRS----KQVLVQCKVkkpYEIQKLSDFESFRLCKQ 907
Cdd:COG5635 253 LRNGRLLLLLDGldeVPDEADRDEVLNQLRRFLeryPKARVIITSRPegydSSELEGFEV---LELAPLSDEQIEEFLKK 329
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 240256009 908 YLDG-------------ENPVISELIScssgIPLALKLLVS 935
Cdd:COG5635 330 WFEAterkaerllealeENPELRELAR----NPLLLTLLAL 366
|
|
| Gmk |
COG0194 |
Guanylate kinase [Nucleotide transport and metabolism]; |
203-234 |
2.33e-03 |
|
Guanylate kinase [Nucleotide transport and metabolism];
Pssm-ID: 439964 Cd Length: 190 Bit Score: 40.44 E-value: 2.33e-03
10 20 30
....*....|....*....|....*....|..
gi 240256009 203 KARMVGISGPSGIGKTTIAKALFSKLsPQFHL 234
Cdd:COG0194 1 RGKLIVLSGPSGAGKTTLVKALLERD-PDLRF 31
|
|
| PRK13409 |
PRK13409 |
ribosome biogenesis/translation initiation ATPase RLI; |
172-262 |
6.26e-03 |
|
ribosome biogenesis/translation initiation ATPase RLI;
Pssm-ID: 184037 [Multi-domain] Cd Length: 590 Bit Score: 40.95 E-value: 6.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 172 KLFKSSNDFSdivgieahLEAMSSILRlKSEkarMVGISGPSGIGKTTIAKALFSKLSP-----QFHLRafVTYKrtNQ- 245
Cdd:PRK13409 345 DLTKKLGDFS--------LEVEGGEIY-EGE---VIGIVGPNGIGKTTFAKLLAGVLKPdegevDPELK--ISYK--PQy 408
|
90
....*....|....*....
gi 240256009 246 --DDYDMKlcwIEKFLSEI 262
Cdd:PRK13409 409 ikPDYDGT---VEDLLRSI 424
|
|
| AMN1 |
cd09293 |
Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in ... |
1166-1295 |
8.27e-03 |
|
Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in Saccharomyces cerevisiae as a component of the Antagonist of MEN pathway (AMEN). The AMEN network is activated by MEN (mitotic exit network) via an active Cdc14, and in turn switches off MEN. Amn1 constitutes one of the alternative mechanisms by which MEN may be disrupted. Specifically, Amn1 binds Tem1 (Termination of M-phase, a GTPase that belongs to the RAS superfamily), and disrupts its association with Cdc15, the primary downstream target. Amn1 is a leucine-rich repeat (LRR) protein, with 12 repeats in the S. cerevisiae ortholog. As a negative regulator of the signal transduction pathway MEN, overexpression of AMN1 slows the growth of wild type cells. The function of the vertebrate members of this family has not been determined experimentally, they have fewer LRRs that determine the extent of this model.
Pssm-ID: 187754 [Multi-domain] Cd Length: 226 Bit Score: 39.23 E-value: 8.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256009 1166 NLEKLKNIKLSHSRELTDILMLSEAL---NLEHIDLEGCTSLID---VSMSIPcCGKLVSLNmkdCSRLRSLPSMVDLTT 1239
Cdd:cd09293 50 NCNKLKKLILPGSKLIDDEGLIALAQscpNLQVLDLRACENITDsgiVALATN-CPKLQTIN---LGRHRNGHLITDVSL 125
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 240256009 1240 LKLLNLSgcsefediqdfaPNLEEIYLAGT-----SIRElpLSIRNLTELVTLDLENCERL 1295
Cdd:cd09293 126 SALGKNC------------TFLQTVGFAGCdvtdkGVWE--LASGCSKSLERLSLNNCRNL 172
|
|
| |
