NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|334186022|ref|NP_191223|]
View 

exocyst complex component sec15A [Arabidopsis thaliana]

Protein Classification

SEC15 family protein( domain architecture ID 10513678)

SEC15 family protein similar to human exocyst complex component 6A/B, which are components of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Sec15 pfam04091
Exocyst complex subunit Sec15-like;
443-754 4.13e-105

Exocyst complex subunit Sec15-like;


:

Pssm-ID: 461169  Cd Length: 308  Bit Score: 324.87  E-value: 4.13e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186022  443 YENNVLSFNLQTSDIMPA-----FTYIAPFSSMVPDVCRIIRSYIKGSVDYLS--YGVNTNFFSVLRKYLDKILIDVLNE 515
Cdd:pfam04091   1 YDKVLKVCWLKPDELEEApseptFPVTLPFSQMYPLCCIDIRNFINKFYKFSEdfYQHHREIDDILRKSLDLLLIRVVSE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186022  516 VILETISNNSiGVSQAMQIAANISFLEKASDYFLRHAAQLcGIPSRSVERpqASLAAKVVLKTSRDAAYLALLNVVNTKL 595
Cdd:pfam04091  81 SLLSRLNSTS-NLSQIAQILINLEYFEIACDELEKLLAQL-RSSQNRGGT--IRLTATKVFKDTRKAAEKRIFELVNSKI 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186022  596 DEFMKLTENvNWTTEEMPQGPHEYINEVVIYLETVMSTAQQILPMDALYKVGVGAIEHISNSIVSTFLSDSIKRFNANAV 675
Cdd:pfam04091 157 DDFLELAEY-DWTPTEVETEPSSYLQDLIAFLETIFSSTLTNLPESVKTLVYFRALDHIAESLLDLLLSPDVKRINENAV 235

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 334186022  676 SAINHDLRVIENFAderyhsSGLNEIYKEGSFRSYLVEARQLINLLSSSQPENFMNPVIRERNYNTLDYKKVATICEKF 754
Cdd:pfam04091 236 SNFDLDVKYLESFA------ASLPVPGKEESLESTFIELRQLIDLLLSDNVEEYLDPSIRMRKYSRVKPKKAAILLEKL 308
 
Name Accession Description Interval E-value
Sec15 pfam04091
Exocyst complex subunit Sec15-like;
443-754 4.13e-105

Exocyst complex subunit Sec15-like;


Pssm-ID: 461169  Cd Length: 308  Bit Score: 324.87  E-value: 4.13e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186022  443 YENNVLSFNLQTSDIMPA-----FTYIAPFSSMVPDVCRIIRSYIKGSVDYLS--YGVNTNFFSVLRKYLDKILIDVLNE 515
Cdd:pfam04091   1 YDKVLKVCWLKPDELEEApseptFPVTLPFSQMYPLCCIDIRNFINKFYKFSEdfYQHHREIDDILRKSLDLLLIRVVSE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186022  516 VILETISNNSiGVSQAMQIAANISFLEKASDYFLRHAAQLcGIPSRSVERpqASLAAKVVLKTSRDAAYLALLNVVNTKL 595
Cdd:pfam04091  81 SLLSRLNSTS-NLSQIAQILINLEYFEIACDELEKLLAQL-RSSQNRGGT--IRLTATKVFKDTRKAAEKRIFELVNSKI 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186022  596 DEFMKLTENvNWTTEEMPQGPHEYINEVVIYLETVMSTAQQILPMDALYKVGVGAIEHISNSIVSTFLSDSIKRFNANAV 675
Cdd:pfam04091 157 DDFLELAEY-DWTPTEVETEPSSYLQDLIAFLETIFSSTLTNLPESVKTLVYFRALDHIAESLLDLLLSPDVKRINENAV 235

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 334186022  676 SAINHDLRVIENFAderyhsSGLNEIYKEGSFRSYLVEARQLINLLSSSQPENFMNPVIRERNYNTLDYKKVATICEKF 754
Cdd:pfam04091 236 SNFDLDVKYLESFA------ASLPVPGKEESLESTFIELRQLIDLLLSDNVEEYLDPSIRMRKYSRVKPKKAAILLEKL 308
 
Name Accession Description Interval E-value
Sec15 pfam04091
Exocyst complex subunit Sec15-like;
443-754 4.13e-105

Exocyst complex subunit Sec15-like;


Pssm-ID: 461169  Cd Length: 308  Bit Score: 324.87  E-value: 4.13e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186022  443 YENNVLSFNLQTSDIMPA-----FTYIAPFSSMVPDVCRIIRSYIKGSVDYLS--YGVNTNFFSVLRKYLDKILIDVLNE 515
Cdd:pfam04091   1 YDKVLKVCWLKPDELEEApseptFPVTLPFSQMYPLCCIDIRNFINKFYKFSEdfYQHHREIDDILRKSLDLLLIRVVSE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186022  516 VILETISNNSiGVSQAMQIAANISFLEKASDYFLRHAAQLcGIPSRSVERpqASLAAKVVLKTSRDAAYLALLNVVNTKL 595
Cdd:pfam04091  81 SLLSRLNSTS-NLSQIAQILINLEYFEIACDELEKLLAQL-RSSQNRGGT--IRLTATKVFKDTRKAAEKRIFELVNSKI 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186022  596 DEFMKLTENvNWTTEEMPQGPHEYINEVVIYLETVMSTAQQILPMDALYKVGVGAIEHISNSIVSTFLSDSIKRFNANAV 675
Cdd:pfam04091 157 DDFLELAEY-DWTPTEVETEPSSYLQDLIAFLETIFSSTLTNLPESVKTLVYFRALDHIAESLLDLLLSPDVKRINENAV 235

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 334186022  676 SAINHDLRVIENFAderyhsSGLNEIYKEGSFRSYLVEARQLINLLSSSQPENFMNPVIRERNYNTLDYKKVATICEKF 754
Cdd:pfam04091 236 SNFDLDVKYLESFA------ASLPVPGKEESLESTFIELRQLIDLLLSDNVEEYLDPSIRMRKYSRVKPKKAAILLEKL 308
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH