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Conserved domains on  [gi|15233035|ref|NP_189497|]
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BCS1 AAA-type ATPase [Arabidopsis thaliana]

Protein Classification

ATP-binding protein( domain architecture ID 10627222)

ATP-binding protein with an AAA (ATPases Associated with various cellular Activities) domain may function as an ATPase, similar to Arabidopsis thaliana BCS1-like protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AAA_assoc pfam14363
Domain associated at C-terminal with AAA; This domain is found in association with the AAA ...
 29-117 1.37e-26

Domain associated at C-terminal with AAA; This domain is found in association with the AAA family, pfam00004.


:

Pssm-ID: 464152  Cd Length: 95  Bit Score: 99.16  E-value: 1.37e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15233035    29 HIEKYIYKLMGWVSNSVHIKFNEYsgEGLEKSEAFDTIHNYLSTKSTALGNR-LKANESKKSKSLVLSLDDHETVEDVFQ 107
Cdd:pfam14363   8 YLSSKLARLFSRFSPYLTIVIDEF--DGFSRNELYDAAQTYLSTKISPSSARrLKASKSPKSKSLVLSLDDNEEVTDVFE 85

                          90
                  ....*....|
gi 15233035   108 GVKVKWSSSV 117
Cdd:pfam14363  86 GVKLWWTLVV 95
 
Name Accession Description Interval E-value
AAA_assoc pfam14363
Domain associated at C-terminal with AAA; This domain is found in association with the AAA ...
 29-117 1.37e-26

Domain associated at C-terminal with AAA; This domain is found in association with the AAA family, pfam00004.


Pssm-ID: 464152  Cd Length: 95  Bit Score: 99.16  E-value: 1.37e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15233035    29 HIEKYIYKLMGWVSNSVHIKFNEYsgEGLEKSEAFDTIHNYLSTKSTALGNR-LKANESKKSKSLVLSLDDHETVEDVFQ 107
Cdd:pfam14363   8 YLSSKLARLFSRFSPYLTIVIDEF--DGFSRNELYDAAQTYLSTKISPSSARrLKASKSPKSKSLVLSLDDNEEVTDVFE 85

                          90
                  ....*....|
gi 15233035   108 GVKVKWSSSV 117
Cdd:pfam14363  86 GVKLWWTLVV 95
 
Name Accession Description Interval E-value
AAA_assoc pfam14363
Domain associated at C-terminal with AAA; This domain is found in association with the AAA ...
 29-117 1.37e-26

Domain associated at C-terminal with AAA; This domain is found in association with the AAA family, pfam00004.


Pssm-ID: 464152  Cd Length: 95  Bit Score: 99.16  E-value: 1.37e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15233035    29 HIEKYIYKLMGWVSNSVHIKFNEYsgEGLEKSEAFDTIHNYLSTKSTALGNR-LKANESKKSKSLVLSLDDHETVEDVFQ 107
Cdd:pfam14363   8 YLSSKLARLFSRFSPYLTIVIDEF--DGFSRNELYDAAQTYLSTKISPSSARrLKASKSPKSKSLVLSLDDNEEVTDVFE 85

                          90
                  ....*....|
gi 15233035   108 GVKVKWSSSV 117
Cdd:pfam14363  86 GVKLWWTLVV 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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