Pectin lyase-like superfamily protein [Arabidopsis thaliana]
polysaccharide lyase family 1 protein( domain architecture ID 10652760)
polysaccharide lyase family 1 protein such as pectate lyase that catalyzes the eliminative cleavage of pectate to yield oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at the non-reducing ends, and pectin lyase that catalyzes the eliminative cleavage of the methyl ester pectin
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
Amb_all | smart00656 | Amb_all domain; |
142-336 | 1.21e-83 | ||||
Amb_all domain; : Pssm-ID: 214765 Cd Length: 190 Bit Score: 254.12 E-value: 1.21e-83
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Name | Accession | Description | Interval | E-value | |||||
Amb_all | smart00656 | Amb_all domain; |
142-336 | 1.21e-83 | |||||
Amb_all domain; Pssm-ID: 214765 Cd Length: 190 Bit Score: 254.12 E-value: 1.21e-83
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PelB | COG3866 | Pectate lyase [Carbohydrate transport and metabolism]; |
92-369 | 9.78e-51 | |||||
Pectate lyase [Carbohydrate transport and metabolism]; Pssm-ID: 443075 [Multi-domain] Cd Length: 326 Bit Score: 173.64 E-value: 9.78e-51
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Pectate_lyase_4 | pfam00544 | Pectate lyase; This enzyme forms a right handed beta helix structure. Pectate lyase is an ... |
187-333 | 2.15e-19 | |||||
Pectate lyase; This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. Pssm-ID: 366158 Cd Length: 211 Bit Score: 86.11 E-value: 2.15e-19
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Name | Accession | Description | Interval | E-value | |||||
Amb_all | smart00656 | Amb_all domain; |
142-336 | 1.21e-83 | |||||
Amb_all domain; Pssm-ID: 214765 Cd Length: 190 Bit Score: 254.12 E-value: 1.21e-83
|
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PelB | COG3866 | Pectate lyase [Carbohydrate transport and metabolism]; |
92-369 | 9.78e-51 | |||||
Pectate lyase [Carbohydrate transport and metabolism]; Pssm-ID: 443075 [Multi-domain] Cd Length: 326 Bit Score: 173.64 E-value: 9.78e-51
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Pectate_lyase_4 | pfam00544 | Pectate lyase; This enzyme forms a right handed beta helix structure. Pectate lyase is an ... |
187-333 | 2.15e-19 | |||||
Pectate lyase; This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. Pssm-ID: 366158 Cd Length: 211 Bit Score: 86.11 E-value: 2.15e-19
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Blast search parameters | ||||
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