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Conserved domains on  [gi|15226446|ref|NP_182207|]
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hypothetical protein (DOMAIN OF UNKNOWN FUNCTION 724 4) [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF724 super family cl25941
Protein of unknown function (DUF724); This family contains several uncharacterized proteins ...
 63-189 3.37e-36

Protein of unknown function (DUF724); This family contains several uncharacterized proteins found in Arabidopsis thaliana and other plants. This region is often found associated with Agenet domains and may contain coiled-coil.


The actual alignment was detected with superfamily member pfam05266:

Pssm-ID: 428400 [Multi-domain]  Cd Length: 188  Bit Score: 125.08  E-value: 3.37e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226446    63 VLPFTKTLASWKEFESDEVYKRTPQRPHFPSLAYTHPSFGEPTAAYLTAAFIDCVKTVDGMCEDTPKSELDVYRETFKMF 142
Cdd:pfam05266   1 VLPFVKKSPLWKTIESMEVFKKVPQRPHFSPLLESKEELREGSALGMMVSFAGLLEKVKKLQVDDSRSVFESLMESFAEL 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 15226446   143 EEQGFDVAEPLSQVLTLLVLRKMRRESLRQQKGMEKEMADDYSKLKK 189
Cdd:pfam05266  81 EKHGFDVKAPQSRINKLLSLKDRQTKLLEELKKLEKKIAEEESEKRK 127
 
Name Accession Description Interval E-value
DUF724 pfam05266
Protein of unknown function (DUF724); This family contains several uncharacterized proteins ...
 63-189 3.37e-36

Protein of unknown function (DUF724); This family contains several uncharacterized proteins found in Arabidopsis thaliana and other plants. This region is often found associated with Agenet domains and may contain coiled-coil.


Pssm-ID: 428400 [Multi-domain]  Cd Length: 188  Bit Score: 125.08  E-value: 3.37e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226446    63 VLPFTKTLASWKEFESDEVYKRTPQRPHFPSLAYTHPSFGEPTAAYLTAAFIDCVKTVDGMCEDTPKSELDVYRETFKMF 142
Cdd:pfam05266   1 VLPFVKKSPLWKTIESMEVFKKVPQRPHFSPLLESKEELREGSALGMMVSFAGLLEKVKKLQVDDSRSVFESLMESFAEL 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 15226446   143 EEQGFDVAEPLSQVLTLLVLRKMRRESLRQQKGMEKEMADDYSKLKK 189
Cdd:pfam05266  81 EKHGFDVKAPQSRINKLLSLKDRQTKLLEELKKLEKKIAEEESEKRK 127
 
Name Accession Description Interval E-value
DUF724 pfam05266
Protein of unknown function (DUF724); This family contains several uncharacterized proteins ...
 63-189 3.37e-36

Protein of unknown function (DUF724); This family contains several uncharacterized proteins found in Arabidopsis thaliana and other plants. This region is often found associated with Agenet domains and may contain coiled-coil.


Pssm-ID: 428400 [Multi-domain]  Cd Length: 188  Bit Score: 125.08  E-value: 3.37e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226446    63 VLPFTKTLASWKEFESDEVYKRTPQRPHFPSLAYTHPSFGEPTAAYLTAAFIDCVKTVDGMCEDTPKSELDVYRETFKMF 142
Cdd:pfam05266   1 VLPFVKKSPLWKTIESMEVFKKVPQRPHFSPLLESKEELREGSALGMMVSFAGLLEKVKKLQVDDSRSVFESLMESFAEL 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 15226446   143 EEQGFDVAEPLSQVLTLLVLRKMRRESLRQQKGMEKEMADDYSKLKK 189
Cdd:pfam05266  81 EKHGFDVKAPQSRINKLLSLKDRQTKLLEELKKLEKKIAEEESEKRK 127
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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