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Conserved domains on  [gi|15225778|ref|NP_180862|]
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receptor like protein 25 [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03150 super family cl31977
hypothetical protein; Provisional
 38-152 1.71e-20

hypothetical protein; Provisional


The actual alignment was detected with superfamily member PLN03150:

Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 89.10  E-value: 1.71e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   38 SAIDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHN 117
Cdd:PLN03150 421 DGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 15225778  118 QLKGEIPQ--GTQITGPPKSSFEGNAGLCGLPLEESC 152
Cdd:PLN03150 501 SLSGRVPAalGGRLLHRASFNFTDNAGLCGIPGLRAC 537
 
Name Accession Description Interval E-value
PLN03150 PLN03150
hypothetical protein; Provisional
 38-152 1.71e-20

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 89.10  E-value: 1.71e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   38 SAIDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHN 117
Cdd:PLN03150 421 DGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 15225778  118 QLKGEIPQ--GTQITGPPKSSFEGNAGLCGLPLEESC 152
Cdd:PLN03150 501 SLSGRVPAalGGRLLHRASFNFTDNAGLCGIPGLRAC 537
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
40-124 1.33e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 65.73  E-value: 1.33e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778  40 IDFSGNRLEgQIPESIGLLKALIALNLSNNAfIGNIPMSMANLIELESLDMSRNGLSgTIPQGLKTLSFLGYINVSHNQL 119
Cdd:COG4886 141 LDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQL 217


                ....*
gi 15225778 120 KgEIP 124
Cdd:COG4886 218 T-DLP 221
LRR_8 pfam13855
Leucine rich repeat;
40-95 7.58e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 33.65  E-value: 7.58e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 15225778    40 IDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGL 95
Cdd:pfam13855   6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
 
Name Accession Description Interval E-value
PLN03150 PLN03150
hypothetical protein; Provisional
 38-152 1.71e-20

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 89.10  E-value: 1.71e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   38 SAIDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHN 117
Cdd:PLN03150 421 DGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 15225778  118 QLKGEIPQ--GTQITGPPKSSFEGNAGLCGLPLEESC 152
Cdd:PLN03150 501 SLSGRVPAalGGRLLHRASFNFTDNAGLCGIPGLRAC 537
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 40-145 9.31e-19

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 84.13  E-value: 9.31e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   40 IDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHNQL 119
Cdd:PLN00113 504 LKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHL 583

                         90       100
                 ....*....|....*....|....*.
gi 15225778  120 KGEIPQGTQITGPPKSSFEGNAGLCG 145
Cdd:PLN00113 584 HGSLPSTGAFLAINASAVAGNIDLCG 609
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 40-124 7.57e-16

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 75.65  E-value: 7.57e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   40 IDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHNQL 119
Cdd:PLN00113 480 LDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQL 559


                 ....*
gi 15225778  120 KGEIP 124
Cdd:PLN00113 560 SGEIP 564
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 34-124 9.02e-15

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 72.57  E-value: 9.02e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   34 LTLYSAIDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYIN 113
Cdd:PLN00113 139 IPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIY 218

                         90
                 ....*....|.
gi 15225778  114 VSHNQLKGEIP 124
Cdd:PLN00113 219 LGYNNLSGEIP 229
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 6-126 5.25e-14

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 70.26  E-value: 5.25e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778    6 NAYGSISYTYQDFIDLRYKGLHMEQ------KRILTLYSAI--DFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPM 77
Cdd:PLN00113 247 NLTGPIPSSLGNLKNLQYLFLYQNKlsgpipPSIFSLQKLIslDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPV 326

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 15225778   78 SMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHNQLKGEIPQG 126
Cdd:PLN00113 327 ALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG 375
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 40-126 1.50e-13

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 69.11  E-value: 1.50e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   40 IDFSGNRLEGQIPESIGLlKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHNQL 119
Cdd:PLN00113 457 LSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535


                 ....*..
gi 15225778  120 KGEIPQG 126
Cdd:PLN00113 536 SGQIPAS 542
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 34-124 2.55e-13

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 68.34  E-value: 2.55e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   34 LTLYSAIDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANlIELESLDMSRNGLSGTIPQGLKTLSFLGYIN 113
Cdd:PLN00113 427 LPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLGSLSELMQLK 505

                         90
                 ....*....|.
gi 15225778  114 VSHNQLKGEIP 124
Cdd:PLN00113 506 LSENKLSGEIP 516
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
40-124 1.33e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 65.73  E-value: 1.33e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778  40 IDFSGNRLEgQIPESIGLLKALIALNLSNNAfIGNIPMSMANLIELESLDMSRNGLSgTIPQGLKTLSFLGYINVSHNQL 119
Cdd:COG4886 141 LDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQL 217


                ....*
gi 15225778 120 KgEIP 124
Cdd:COG4886 218 T-DLP 221
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 34-126 2.24e-12

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 65.64  E-value: 2.24e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   34 LTLYSAIDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYIN 113
Cdd:PLN00113 235 LTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILH 314

                         90
                 ....*....|...
gi 15225778  114 VSHNQLKGEIPQG 126
Cdd:PLN00113 315 LFSNNFTGKIPVA 327
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 45-125 4.54e-12

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 64.48  E-value: 4.54e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   45 NRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHNQLKGEIP 124
Cdd:PLN00113 222 NNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP 301


                 .
gi 15225778  125 Q 125
Cdd:PLN00113 302 E 302
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
40-130 8.26e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 63.41  E-value: 8.26e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778  40 IDFSGNRLEgQIPESIGLLKALIALNLSNNAfIGNIPMSMANLIELESLDMSRNGLSgTIPQgLKTLSFLGYINVSHNQL 119
Cdd:COG4886 187 LDLSNNQIT-DLPEPLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQL 262

                        90
                ....*....|.
gi 15225778 120 KgEIPQGTQIT 130
Cdd:COG4886 263 T-DLPPLANLT 272
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 33-124 3.25e-11

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 62.17  E-value: 3.25e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   33 ILTLYSAIDF---SGNRLEGQIPEsiGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFL 109
Cdd:PLN00113 113 IFTTSSSLRYlnlSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSL 190

                         90
                 ....*....|....*
gi 15225778  110 GYINVSHNQLKGEIP 124
Cdd:PLN00113 191 EFLTLASNQLVGQIP 205
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 40-124 3.95e-11

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 61.79  E-value: 3.95e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   40 IDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHNQL 119
Cdd:PLN00113 169 LDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNL 248


                 ....*
gi 15225778  120 KGEIP 124
Cdd:PLN00113 249 TGPIP 253
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 32-124 6.88e-11

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 61.02  E-value: 6.88e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   32 RILTLYSaidfsgNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGY 111
Cdd:PLN00113 191 EFLTLAS------NQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQY 264

                         90
                 ....*....|...
gi 15225778  112 INVSHNQLKGEIP 124
Cdd:PLN00113 265 LFLYQNKLSGPIP 277
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 38-125 5.79e-10

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 58.32  E-value: 5.79e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   38 SAIDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLI-ELESLDMSRNGLSGTIPQGlkTLSFLGYINVSH 116
Cdd:PLN00113  72 VSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIPRG--SIPNLETLDLSN 149


                 ....*....
gi 15225778  117 NQLKGEIPQ 125
Cdd:PLN00113 150 NMLSGEIPN 158
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 32-126 1.50e-08

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 54.08  E-value: 1.50e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   32 RILTLYSaidfsgNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGY 111
Cdd:PLN00113 335 QVLQLWS------NKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRR 408

                         90
                 ....*....|....*
gi 15225778  112 INVSHNQLKGEIPQG 126
Cdd:PLN00113 409 VRLQDNSFSGELPSE 423
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 38-123 1.80e-08

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 54.08  E-value: 1.80e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778   38 SAIDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHN 117
Cdd:PLN00113 359 TVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNN 438


                 ....*.
gi 15225778  118 QLKGEI 123
Cdd:PLN00113 439 NLQGRI 444
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
46-124 2.74e-08

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 53.01  E-value: 2.74e-08
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15225778  46 RLEGQIPESIGLLKALIALNLSNNAfIGNIPMSMANLIELESLDMSRNGLSgTIPQGLKTLSFLGYINVSHNQLKgEIP 124
Cdd:COG4886 100 ELDLSGNEELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLT-DLP 175
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 61-127 5.23e-06

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 46.76  E-value: 5.23e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15225778   61 LIALNLSNNAFIGNIPMSMANLIELESLDMSRNGLSGTIPQGLKTLSF-LGYINVSHNQLKGEIPQGT 127
Cdd:PLN00113  71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSsLRYLNLSNNNFTGSIPRGS 138
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
40-184 1.90e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 41.84  E-value: 1.90e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15225778  40 IDFSGNRLEgQIPEsIGLLKALIALNLSNNAfIGNIPMSmANLIELESLDMSRNGLSGTIPQGLKTLSFLGYINVSHNQL 119
Cdd:COG4886 233 LDLSNNQLT-DLPE-LGNLTNLEELDLSNNQ-LTDLPPL-ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLL 308

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15225778 120 KGEIPQGTQITGPPKSSFEGNAGLCGLPLEESCFGTKVPPIQQSKKEDNQEDAKVLNWKAVATGY 184
Cdd:COG4886 309 NLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLG 373
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 38-82 2.69e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 41.37  E-value: 2.69e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 15225778   38 SAIDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANL 82
Cdd:PLN00113 550 SQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFL 594
LRR_8 pfam13855
Leucine rich repeat;
40-95 7.58e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 33.65  E-value: 7.58e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 15225778    40 IDFSGNRLEGQIPESIGLLKALIALNLSNNAFIGNIPMSMANLIELESLDMSRNGL 95
Cdd:pfam13855   6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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