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Conserved domains on  [gi|15227315|ref|NP_179279|]
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Disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]

Protein Classification

disease resistance family protein( domain architecture ID 1000118)

disease resistance family protein similar to Nicotiana glutinosa TMV resistance protein N; resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein

Gene Ontology:  GO:0006952

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
 1-981 0e+00

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 822.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315     1 MASSSSSRTWNYRVFASFHGPDVRKSFLSHFRKQFICNGITMFDDQKIVRSQTIAPSLTQGIRESKISIVILSKNYASST 80
Cdd:PLN03210    2 ASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSS 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315    81 WCLNELLEILKCREDIGQIVMTVFYGVDPSDVRKQTGEFGTVFNKTCARRTEKERRNWSQALNVVGNIAGEHFLNWDNEA 160
Cdd:PLN03210   82 WCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   161 EMIEKIARDVSEKLNMTPSSDFDGMVGIEAHLKEMEVLLDFDYDGVKIVGIFGPAGIGKTTIARALHSlLLFKKFQLTCF 240
Cdd:PLN03210  162 KMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFS-RLSRQFQSSVF 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   241 VDNLRGSYPIGI------DEYGLKLRLQEHLLSKILNQDGMRISHLGAVKERLCDMKVLIILDDVNDVKQLEALANDTTW 314
Cdd:PLN03210  241 IDRAFISKSMEIyssanpDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQW 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   315 FGPGSRVIVTTENKEILQRHGIDNMYHVGFPSDEKAMEILCGYAFKQSSPRPGFNYLAQKVTWLCGNLPLGLRVVGSSLR 394
Cdd:PLN03210  321 FGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLR 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   395 GKKEDEWKSVIRRLDTIIDRDIEDVLRVGYESLH-ENEQSLFLHIAVFFNCKDVDLVKAMLADDNLDIAHGLKILVNKSL 473
Cdd:PLN03210  401 GRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSL 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   474 IYISTTgEIRMHKLLQQVGRQAINRQ--EPWKRLILTNAQEICYVLENDKGTGVVSGISFDTSGISEVILSNRALRRMSN 551
Cdd:PLN03210  481 IHVRED-IVEMHSLLQEMGKEIVRAQsnEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRN 559

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   552 LRFLSVYKTRHDGNNIM--HIPEDMK-FPPRLRLLHWEAYPSKSLPLGFCLENLVELNMKDSQLEKLWEGTQLLTNLKKM 628
Cdd:PLN03210  560 LLFLKFYTKKWDQKKEVrwHLPEGFDyLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNI 639

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   629 DLSRSVHLKELPDLSNATNLERLELCDCRALVELPKSIGNLHKLENLVMANCISLEVIPTHINLASLEHITMTGCSRLKT 708
Cdd:PLN03210  640 DLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKS 719

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   709 FPDFSTNIERLLLIGTSVE------------------------------------------------------EVPASIR 734
Cdd:PLN03210  720 FPDISTNISWLDLDETAIEefpsnlrlenldelilcemkseklwervqpltplmtmlspsltrlflsdipslvELPSSIQ 799

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   735 HWSSLSDFCIKNNEDLKSLTY--------------------FPE---KVELLDLSYTDIEKIPDCIKGFHGLKSLDVAGC 791
Cdd:PLN03210  800 NLHKLEHLEIENCINLETLPTginleslesldlsgcsrlrtFPDistNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGC 879

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   792 RKLTSLPELPMSLGLLVAL---DCESLEIITYpLNTPSA----------------RLNFTNCFKLGEESrrLIIQrcatQ 852
Cdd:PLN03210  880 NNLQRVSLNISKLKHLETVdfsDCGALTEASW-NGSPSEvamatdnihsklpstvCINFINCFNLDQEA--LLQQ----Q 952

                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   853 FLDGYACLPGRVMPDEFNQRTSGNNSLNIRLSSAS-----FKFKACVVISPNQQQHSWehtdirciVGSYNKVIC----- 922
Cdd:PLN03210  953 SIFKQLILSGEEVPSYFTHRTTGASLTNIPLLHISpcqpfFRFRACAVVDSESFFIIS--------VSFDIQVCCrfidr 1024

                        1050      1060      1070      1080      1090      1100      1110
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15227315   923 ----VEHPNE----STRIQTEHLCIFHGSVSEVSSNEALFEFCID-------ASNQFDNFKILECGVRILTNEP 981
Cdd:PLN03210 1025 lgnhFDSPYQphvfSVTKKGSHLVIFDCCFPLNEDNAPLAELNYDhvdiqfrLTNKNSQLKLKGCGIRLSEDDS 1098
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1-981 0e+00

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 822.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315     1 MASSSSSRTWNYRVFASFHGPDVRKSFLSHFRKQFICNGITMFDDQKIVRSQTIAPSLTQGIRESKISIVILSKNYASST 80
Cdd:PLN03210    2 ASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSS 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315    81 WCLNELLEILKCREDIGQIVMTVFYGVDPSDVRKQTGEFGTVFNKTCARRTEKERRNWSQALNVVGNIAGEHFLNWDNEA 160
Cdd:PLN03210   82 WCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   161 EMIEKIARDVSEKLNMTPSSDFDGMVGIEAHLKEMEVLLDFDYDGVKIVGIFGPAGIGKTTIARALHSlLLFKKFQLTCF 240
Cdd:PLN03210  162 KMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFS-RLSRQFQSSVF 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   241 VDNLRGSYPIGI------DEYGLKLRLQEHLLSKILNQDGMRISHLGAVKERLCDMKVLIILDDVNDVKQLEALANDTTW 314
Cdd:PLN03210  241 IDRAFISKSMEIyssanpDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQW 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   315 FGPGSRVIVTTENKEILQRHGIDNMYHVGFPSDEKAMEILCGYAFKQSSPRPGFNYLAQKVTWLCGNLPLGLRVVGSSLR 394
Cdd:PLN03210  321 FGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLR 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   395 GKKEDEWKSVIRRLDTIIDRDIEDVLRVGYESLH-ENEQSLFLHIAVFFNCKDVDLVKAMLADDNLDIAHGLKILVNKSL 473
Cdd:PLN03210  401 GRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSL 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   474 IYISTTgEIRMHKLLQQVGRQAINRQ--EPWKRLILTNAQEICYVLENDKGTGVVSGISFDTSGISEVILSNRALRRMSN 551
Cdd:PLN03210  481 IHVRED-IVEMHSLLQEMGKEIVRAQsnEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRN 559

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   552 LRFLSVYKTRHDGNNIM--HIPEDMK-FPPRLRLLHWEAYPSKSLPLGFCLENLVELNMKDSQLEKLWEGTQLLTNLKKM 628
Cdd:PLN03210  560 LLFLKFYTKKWDQKKEVrwHLPEGFDyLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNI 639

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   629 DLSRSVHLKELPDLSNATNLERLELCDCRALVELPKSIGNLHKLENLVMANCISLEVIPTHINLASLEHITMTGCSRLKT 708
Cdd:PLN03210  640 DLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKS 719

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   709 FPDFSTNIERLLLIGTSVE------------------------------------------------------EVPASIR 734
Cdd:PLN03210  720 FPDISTNISWLDLDETAIEefpsnlrlenldelilcemkseklwervqpltplmtmlspsltrlflsdipslvELPSSIQ 799

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   735 HWSSLSDFCIKNNEDLKSLTY--------------------FPE---KVELLDLSYTDIEKIPDCIKGFHGLKSLDVAGC 791
Cdd:PLN03210  800 NLHKLEHLEIENCINLETLPTginleslesldlsgcsrlrtFPDistNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGC 879

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   792 RKLTSLPELPMSLGLLVAL---DCESLEIITYpLNTPSA----------------RLNFTNCFKLGEESrrLIIQrcatQ 852
Cdd:PLN03210  880 NNLQRVSLNISKLKHLETVdfsDCGALTEASW-NGSPSEvamatdnihsklpstvCINFINCFNLDQEA--LLQQ----Q 952

                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   853 FLDGYACLPGRVMPDEFNQRTSGNNSLNIRLSSAS-----FKFKACVVISPNQQQHSWehtdirciVGSYNKVIC----- 922
Cdd:PLN03210  953 SIFKQLILSGEEVPSYFTHRTTGASLTNIPLLHISpcqpfFRFRACAVVDSESFFIIS--------VSFDIQVCCrfidr 1024

                        1050      1060      1070      1080      1090      1100      1110
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15227315   923 ----VEHPNE----STRIQTEHLCIFHGSVSEVSSNEALFEFCID-------ASNQFDNFKILECGVRILTNEP 981
Cdd:PLN03210 1025 lgnhFDSPYQphvfSVTKKGSHLVIFDCCFPLNEDNAPLAELNYDhvdiqfrLTNKNSQLKLKGCGIRLSEDDS 1098
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 12-175 5.85e-68

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 224.94  E-value: 5.85e-68
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315     12 YRVFASFHGPDVRKSFLSHFRKQFICNGITMF-DDQKIVRSQTIAPSLTQGIRESKISIVILSKNYASSTWCLNELLEIL 90
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFiDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315     91 KCREDIGQIVMTVFYGVDPSDVRKQTGEFGTVFNKTCARRTEKERRNWSQALNVVGNIagEHFLNWDNEAEMIEKIARDV 170
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158


                   ....*
gi 15227315    171 SEKLN 175
Cdd:pfam01582  159 SNKLN 163
TIR smart00255
Toll - interleukin 1 - resistance;
12-148 1.22e-38

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 140.54  E-value: 1.22e-38
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315      12 YRVFASFHG-PDVRKSFLSHFRKQFICNGITMFDDQKIVRSQtIAPSLTQGIRESKISIVILSKNYASSTWCLNELLEIL 90
Cdd:smart00255    2 YDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGG-DLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315      91 KCR-EDIGQIVMTVFYGVDPSDVRKQTGEFGTVFNKTCARRTEKE-RRNWSQALNVVGNI 148
Cdd:smart00255   81 ENAlEEGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEkEQFWKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
599-797 1.13e-17

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 86.91  E-value: 1.13e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  599 LENLVELNMKDSqleklwEGTQLLTNLKKMDLSRSvHLKELPD-LSNATNLERLELCDCRaLVELPKSIGNLHKLENLVM 677
Cdd:COG4886   95 LTNLTELDLSGN------EELSNLTNLESLDLSGN-QLTDLPEeLANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDL 166

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  678 ANCiSLEVIPTHI-NLASLEHITMTGCsRLKTFPDF---STNIERLLLIGTSVEEVPASIRHWSSLSDFCIKNN--EDLK 751
Cdd:COG4886  167 SNN-QLTDLPEELgNLTNLKELDLSNN-QITDLPEPlgnLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNqlTDLP 244

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 15227315  752 SLTYFPeKVELLDLSYTDIEKIPDCIKgFHGLKSLDVAGCrKLTSL 797
Cdd:COG4886  245 ELGNLT-NLEELDLSNNQLTDLPPLAN-LTNLKTLDLSNN-QLTDL 287
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1-981 0e+00

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 822.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315     1 MASSSSSRTWNYRVFASFHGPDVRKSFLSHFRKQFICNGITMFDDQKIVRSQTIAPSLTQGIRESKISIVILSKNYASST 80
Cdd:PLN03210    2 ASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSS 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315    81 WCLNELLEILKCREDIGQIVMTVFYGVDPSDVRKQTGEFGTVFNKTCARRTEKERRNWSQALNVVGNIAGEHFLNWDNEA 160
Cdd:PLN03210   82 WCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   161 EMIEKIARDVSEKLNMTPSSDFDGMVGIEAHLKEMEVLLDFDYDGVKIVGIFGPAGIGKTTIARALHSlLLFKKFQLTCF 240
Cdd:PLN03210  162 KMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFS-RLSRQFQSSVF 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   241 VDNLRGSYPIGI------DEYGLKLRLQEHLLSKILNQDGMRISHLGAVKERLCDMKVLIILDDVNDVKQLEALANDTTW 314
Cdd:PLN03210  241 IDRAFISKSMEIyssanpDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQW 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   315 FGPGSRVIVTTENKEILQRHGIDNMYHVGFPSDEKAMEILCGYAFKQSSPRPGFNYLAQKVTWLCGNLPLGLRVVGSSLR 394
Cdd:PLN03210  321 FGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLR 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   395 GKKEDEWKSVIRRLDTIIDRDIEDVLRVGYESLH-ENEQSLFLHIAVFFNCKDVDLVKAMLADDNLDIAHGLKILVNKSL 473
Cdd:PLN03210  401 GRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSL 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   474 IYISTTgEIRMHKLLQQVGRQAINRQ--EPWKRLILTNAQEICYVLENDKGTGVVSGISFDTSGISEVILSNRALRRMSN 551
Cdd:PLN03210  481 IHVRED-IVEMHSLLQEMGKEIVRAQsnEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRN 559

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   552 LRFLSVYKTRHDGNNIM--HIPEDMK-FPPRLRLLHWEAYPSKSLPLGFCLENLVELNMKDSQLEKLWEGTQLLTNLKKM 628
Cdd:PLN03210  560 LLFLKFYTKKWDQKKEVrwHLPEGFDyLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNI 639

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   629 DLSRSVHLKELPDLSNATNLERLELCDCRALVELPKSIGNLHKLENLVMANCISLEVIPTHINLASLEHITMTGCSRLKT 708
Cdd:PLN03210  640 DLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKS 719

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   709 FPDFSTNIERLLLIGTSVE------------------------------------------------------EVPASIR 734
Cdd:PLN03210  720 FPDISTNISWLDLDETAIEefpsnlrlenldelilcemkseklwervqpltplmtmlspsltrlflsdipslvELPSSIQ 799

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   735 HWSSLSDFCIKNNEDLKSLTY--------------------FPE---KVELLDLSYTDIEKIPDCIKGFHGLKSLDVAGC 791
Cdd:PLN03210  800 NLHKLEHLEIENCINLETLPTginleslesldlsgcsrlrtFPDistNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGC 879

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   792 RKLTSLPELPMSLGLLVAL---DCESLEIITYpLNTPSA----------------RLNFTNCFKLGEESrrLIIQrcatQ 852
Cdd:PLN03210  880 NNLQRVSLNISKLKHLETVdfsDCGALTEASW-NGSPSEvamatdnihsklpstvCINFINCFNLDQEA--LLQQ----Q 952

                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315   853 FLDGYACLPGRVMPDEFNQRTSGNNSLNIRLSSAS-----FKFKACVVISPNQQQHSWehtdirciVGSYNKVIC----- 922
Cdd:PLN03210  953 SIFKQLILSGEEVPSYFTHRTTGASLTNIPLLHISpcqpfFRFRACAVVDSESFFIIS--------VSFDIQVCCrfidr 1024

                        1050      1060      1070      1080      1090      1100      1110
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15227315   923 ----VEHPNE----STRIQTEHLCIFHGSVSEVSSNEALFEFCID-------ASNQFDNFKILECGVRILTNEP 981
Cdd:PLN03210 1025 lgnhFDSPYQphvfSVTKKGSHLVIFDCCFPLNEDNAPLAELNYDhvdiqfrLTNKNSQLKLKGCGIRLSEDDS 1098
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 12-175 5.85e-68

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 224.94  E-value: 5.85e-68
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315     12 YRVFASFHGPDVRKSFLSHFRKQFICNGITMF-DDQKIVRSQTIAPSLTQGIRESKISIVILSKNYASSTWCLNELLEIL 90
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFiDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315     91 KCREDIGQIVMTVFYGVDPSDVRKQTGEFGTVFNKTCARRTEKERRNWSQALNVVGNIagEHFLNWDNEAEMIEKIARDV 170
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158


                   ....*
gi 15227315    171 SEKLN 175
Cdd:pfam01582  159 SNKLN 163
TIR smart00255
Toll - interleukin 1 - resistance;
12-148 1.22e-38

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 140.54  E-value: 1.22e-38
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315      12 YRVFASFHG-PDVRKSFLSHFRKQFICNGITMFDDQKIVRSQtIAPSLTQGIRESKISIVILSKNYASSTWCLNELLEIL 90
Cdd:smart00255    2 YDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGG-DLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315      91 KCR-EDIGQIVMTVFYGVDPSDVRKQTGEFGTVFNKTCARRTEKE-RRNWSQALNVVGNI 148
Cdd:smart00255   81 ENAlEEGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEkEQFWKKALYAVPSK 140
NB-ARC pfam00931
NB-ARC domain;
204-408 9.81e-20

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 89.75  E-value: 9.81e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315    204 DGVKIVGIFGPAGIGKTTIARAlhsllLFKKFQLtcfvdnLRGSYPIGIDEYGLKLRLQEHLLSKILNQDGMRISHL--- 280
Cdd:pfam00931   16 DEPGIVGIHGMGGVGKTTLAAQ-----IFNDFDE------VEGHFDSVAWVVVSKTFTISTLQQTILQNLGLSEDDWdnk 84

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315    281 --GAVKERLC----DMKVLIILDDVNDVKQLEALANDTTWFGPGSRVIVTTENKEILQRHG-IDNMYHVGFPSDEKAMEI 353
Cdd:pfam00931   85 eeGELARKIRrallTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVGgPSDPHEVELLEPDEAWEL 164

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 15227315    354 LCGYAF-KQSSPRPGFNYLAQKVTWLCGNLPLGLRVVGSSLRGKK-EDEWKSVIRRL 408
Cdd:pfam00931  165 FENKVFpKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCKKtVEEWKHVYDVL 221
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
599-797 1.13e-17

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 86.91  E-value: 1.13e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  599 LENLVELNMKDSqleklwEGTQLLTNLKKMDLSRSvHLKELPD-LSNATNLERLELCDCRaLVELPKSIGNLHKLENLVM 677
Cdd:COG4886   95 LTNLTELDLSGN------EELSNLTNLESLDLSGN-QLTDLPEeLANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDL 166

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  678 ANCiSLEVIPTHI-NLASLEHITMTGCsRLKTFPDF---STNIERLLLIGTSVEEVPASIRHWSSLSDFCIKNN--EDLK 751
Cdd:COG4886  167 SNN-QLTDLPEELgNLTNLKELDLSNN-QITDLPEPlgnLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNqlTDLP 244

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 15227315  752 SLTYFPeKVELLDLSYTDIEKIPDCIKgFHGLKSLDVAGCrKLTSL 797
Cdd:COG4886  245 ELGNLT-NLEELDLSNNQLTDLPPLAN-LTNLKTLDLSNN-QLTDL 287
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
599-821 5.50e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.52  E-value: 5.50e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  599 LENLVELNMKDSQLEKLWEGTQLLTNLKKMDLSRSVHLKELPDLSNATNLERLELCDCRaLVELPKSIGNLHKLENLVMA 678
Cdd:COG4886   66 LLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLS 144

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  679 NCiSLEVIPTHI-NLASLEHITMTGCsRLKTFPDF---STNIERLLLIGTSVEEVPASIrhwsslsdfciknnEDLKSLT 754
Cdd:COG4886  145 NN-QLTDLPEPLgNLTNLKSLDLSNN-QLTDLPEElgnLTNLKELDLSNNQITDLPEPL--------------GNLTNLE 208

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15227315  755 YfpekvelLDLSYTDIEKIPDCIKGFHGLKSLDVAGCrKLTSLPELpMSLGLLVALDCESLEIITYP 821
Cdd:COG4886  209 E-------LDLSGNQLTDLPEPLANLTNLETLDLSNN-QLTDLPEL-GNLTNLEELDLSNNQLTDLP 266
LRR_3 pfam07725
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ...
 601-620 6.34e-07

Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.


Pssm-ID: 429621 [Multi-domain]  Cd Length: 20  Bit Score: 46.56  E-value: 6.34e-07
                           10        20
                   ....*....|....*....|
gi 15227315    601 NLVELNMKDSQLEKLWEGTQ 620
Cdd:pfam07725    1 NLVELNMPYSKLEKLWEGVK 20
COG3903 COG3903
Predicted ATPase [General function prediction only];
204-494 3.42e-06

Predicted ATPase [General function prediction only];


Pssm-ID: 443109 [Multi-domain]  Cd Length: 933  Bit Score: 51.56  E-value: 3.42e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  204 DGVKIVGIFGPAGIGKTTIA-RALHslllfkkfQLT-------CFVDnLRGsypigideyglkLRLQEHLLSKILNQDGM 275
Cdd:COG3903  174 SAARLVTLTGPGGVGKTRLAlEVAH--------RLAdrfpdgvWFVD-LAG------------VTDPALVLAAVARALGV 232

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  276 RISH----LGAVKERLCDMKVLIILDDVNDVK-----QLEALANDTtwfgPGSRVIVTTEnkeilQRHGIDNMYHV---- 342
Cdd:COG3903  233 RDAPgrdpAARLRAALADRRLLLVLDNCEHVVdaaaaLVRPLLPAA----PGLRVLATSR-----EPLGLPGERVLplpp 303

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  343 -GFPSDEK------AMEILCGYAfkqSSPRPGFNYLAQKVTWL------CGNLPLGLRVVGSSLRGkkedewksviRRLD 409
Cdd:COG3903  304 lAVPPPGAealaseAVALFVERA---GAARPGFALDAAEAAAVaeicrrLDGLPLAIELAAARLRT----------LSLA 370

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  410 TIIDR--DIEDVLRVG------------------YESLHENEQSLFLHIAVF---FnckDVDLVKAMLADD-NLDIAHGL 465
Cdd:COG3903  371 ELAARldDRLRLLTGGrrdapprhrtlraaldwsYDLLSPAERRLLRRLSVFpggF---TLEAAEAVCGGDgPADVLDLL 447

                        330       340       350
                 ....*....|....*....|....*....|..
gi 15227315  466 KILVNKSLIYISTTGEI---RMHKLLQQVGRQ 494
Cdd:COG3903  448 AALVDKSLLEVEGGGGGpryRLLETVREYAAE 479
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
 14-100 3.55e-06

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 46.92  E-value: 3.55e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315     14 VFASFHGPDvrKSFLSHFRKQFICNGIT-MFDDQKIVRSQTIAPSLTQGIRESKISIVILSKNYASSTWCLNELLEILKC 92
Cdd:pfam13676    1 VFISYAGED--RAWAEWLADALEAAGYRvWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALAD 78


                   ....*...
gi 15227315     93 REDIGQIV 100
Cdd:pfam13676   79 PEGRKRLI 86
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
598-810 7.80e-06

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 49.55  E-value: 7.80e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  598 CLENLVELNMKDSQLEKLWEGTQLLTNLKKMDLSRSVHLKELPDLSNATNLERLELCDCRALVELPKSIGNLHKLENLVM 677
Cdd:COG4886    1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  678 ANCISLEVIPTHINLASLEHITMTGCSRLKTFpdfsTNIERLLLIGTSVEEVPASIrhwsslsdfciknnEDLKSLTYfp 757
Cdd:COG4886   81 LLSLLLLGLTDLGDLTNLTELDLSGNEELSNL----TNLESLDLSGNQLTDLPEEL--------------ANLTNLKE-- 140

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 15227315  758 ekvelLDLSYTDIEKIPDCIKGFHGLKSLDVAGCrKLTSLPElpmSLGLLVAL 810
Cdd:COG4886  141 -----LDLSNNQLTDLPEPLGNLTNLKSLDLSNN-QLTDLPE---ELGNLTNL 184
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
545-699 1.42e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 45.69  E-value: 1.42e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  545 ALRRMSNLRFLSVYktrhdGNNIMHIPEDMKFPPRLRLLHWEAYPSKSLPLGFC-LENLVELNMKDSQLEKLWEGTQLlT 623
Cdd:COG4886  177 ELGNLTNLKELDLS-----NNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLAnLTNLETLDLSNNQLTDLPELGNL-T 250

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15227315  624 NLKKMDLSRSvHLKELPDLSNATNLERLELCDCRALVELPKSIGNLHKLENLVMANCISLEVIPTHINLASLEHIT 699
Cdd:COG4886  251 NLEELDLSNN-QLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLL 325
ATPase_2 pfam01637
ATPase domain predominantly from Archaea; This family contain a conserved P-loop motif that is ...
 189-299 2.97e-04

ATPase domain predominantly from Archaea; This family contain a conserved P-loop motif that is involved in binding ATP. There are eukaryote members as well as archaeal members in this family.


Pssm-ID: 376582 [Multi-domain]  Cd Length: 222  Bit Score: 43.46  E-value: 2.97e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315    189 EAHLKEMEVLLDFDYDgvKIVGIFGPAGIGKTTIARALHSLLLFKKFqLTCFVDNLRGSYPIGIDEYGLKLRLQEHLLSK 268
Cdd:pfam01637    5 EKELKELEEWAERGPN--LIYVIYGPEGCGKTALLRESIENLLDLGY-YVIYYDPLRRYFISKLDRFEEVRRLAEALGIA 81

                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 15227315    269 ILNQDGMRI--------SHLGAVKERLcdMKVLIILDDV 299
Cdd:pfam01637   82 VPKAELEESklaflaieLLLEALKRRG--KKIAIIIDEV 118
AAA smart00382
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ...
 207-336 4.49e-04

ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.


Pssm-ID: 214640 [Multi-domain]  Cd Length: 148  Bit Score: 41.98  E-value: 4.49e-04
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315     207 KIVGIFGPAGIGKTTIARALHSLLLFKKFQLtCFVDnlrgsyPIGIDEYGLKLRLQEHLLSKILNQDGMRIshLGAVKER 286
Cdd:smart00382    3 EVILIVGPPGSGKTTLARALARELGPPGGGV-IYID------GEDILEEVLDQLLLIIVGGKKASGSGELR--LRLALAL 73

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15227315     287 LCDMKV-LIILDDVN---DVKQLEAL-------ANDTTWFGPGSRVIVTTENKEILQRHGI 336
Cdd:smart00382   74 ARKLKPdVLILDEITsllDAEQEALLllleelrLLLLLKSEKNLTVILTTNDEKDLGPALL 134
NACHT pfam05729
NACHT domain; This NTPase domain is found in apoptosis proteins as well as those involved in ...
 211-325 5.41e-04

NACHT domain; This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.


Pssm-ID: 428606 [Multi-domain]  Cd Length: 166  Bit Score: 41.91  E-value: 5.41e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315    211 IFGPAGIGKTTIARALHSLL----LFKKFQLTcFVDNLRgsypiGIDEYGLKLRLQEHLLSKILnQDGMRISHLGAVKER 286
Cdd:pfam05729    5 LQGEAGSGKTTLLQKLALLWaqgkLPQGFDFV-FFLPCR-----ELSRSGNARSLADLLFSQWP-EPAAPVSEVWAVILE 77

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 15227315    287 LCDmKVLIILDDVNDVK----QLEALANDTTWFG--------PGSRVIVTT 325
Cdd:pfam05729   78 LPE-RLLLILDGLDELVsdlgQLDGPCPVLTLLSsllrkkllPGASLLLTV 127
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
186-325 3.20e-03

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 41.71  E-value: 3.20e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227315  186 VGIEAHLKEMEVLLDFDYDGVKIVgIFGPAGIGKTTIARALhSLLLFKKFQltcfvdNLRGSYPIGID--EYGLKLRLQE 263
Cdd:COG5635  161 LNLLERIESLKRLELLEAKKKRLL-ILGEPGSGKTTLLRYL-ALELAERYL------DAEDPIPILIElrDLAEEASLED 232

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15227315  264 HLLSKILNQDGmriSHLGAVKERLCDMKVLIILDDVNDVKQLEALANDTTWFG------PGSRVIVTT 325
Cdd:COG5635  233 LLAEALEKRGG---EPEDALERLLRNGRLLLLLDGLDEVPDEADRDEVLNQLRrfleryPKARVIITS 297
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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