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Conserved domains on  [gi|15226144|ref|NP_178810|]
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ATPase, F0 complex, subunit A protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 135-382 4.64e-70

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


:

Pssm-ID: 273458  Cd Length: 226  Bit Score: 219.39  E-value: 4.64e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   135 PLDQFEIVPLIPMHIGNFYFSFtnpslfmlltlsFFLLLIHFVTKKGGGNLVPNAWQSLVELLYDFVLNLVKEQIGGLSG 214
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLIL------------LLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKG 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   215 NvkqmFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLV 294
Cdd:TIGR01131  69 K----FFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLV 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   295 LLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNdIFYFIgalgpLFIVLALTGLELGVAILQAYVFTILI 374
Cdd:TIGR01131 145 IIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSA-IFALL-----LLILVALIILEIFVAFIQAYVFTLLT 218


                  ....*...
gi 15226144   375 CIYLNDAI 382
Cdd:TIGR01131 219 CLYLNDAL 226
 
Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 135-382 4.64e-70

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 219.39  E-value: 4.64e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   135 PLDQFEIVPLIPMHIGNFYFSFtnpslfmlltlsFFLLLIHFVTKKGGGNLVPNAWQSLVELLYDFVLNLVKEQIGGLSG 214
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLIL------------LLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKG 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   215 NvkqmFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLV 294
Cdd:TIGR01131  69 K----FFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLV 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   295 LLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNdIFYFIgalgpLFIVLALTGLELGVAILQAYVFTILI 374
Cdd:TIGR01131 145 IIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSA-IFALL-----LLILVALIILEIFVAFIQAYVFTLLT 218


                  ....*...
gi 15226144   375 CIYLNDAI 382
Cdd:TIGR01131 219 CLYLNDAL 226
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 133-385 3.50e-62

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 199.85  E-value: 3.50e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  133 ASPLDQFEIVPL--IPMHIGNFYFSFTNPSLFMLLTLSFFLLLIHfvtkkgGGNLVPNAWQSLVELLYDFVLNLVKEQIG 210
Cdd:MTH00175   3 AAYFDQFNIIRLitIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLK------GDKLIPNRWQSIMELIYLNIRSVVHDNLG 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  211 GlsgnVKQMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLA 290
Cdd:MTH00175  77 K----SGQKYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  291 PFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYfigALGPLFIVLALTGLELGVAILQAYVF 370
Cdd:MTH00175 153 PFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIIL---SLFPMLIMIFITLLEMAVAVIQAYVF 229

                        250
                 ....*....|....*
gi 15226144  371 TILICIYLNDAINLH 385
Cdd:MTH00175 230 CLLTTIYLGDTIALH 244
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 218-379 9.83e-59

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 187.61  E-value: 9.83e-59
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144 218 QMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLE 297
Cdd:cd00310   2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144 298 LISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLcmndifyFIGALGPLFIVLALTGLELGVAILQAYVFTILICIY 377
Cdd:cd00310  82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLL-------SSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154


                ..
gi 15226144 378 LN 379
Cdd:cd00310 155 IS 156
ATP-synt_A pfam00119
ATP synthase A chain;
176-379 3.45e-57

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 185.77  E-value: 3.45e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   176 FVTKKGGGNLVPNAWQSLVELLYDFVLNLVKEQIGGLSGnvkQMFFPCILVTFLFLLFCNLQGMI---PYSFTVTSHFLI 252
Cdd:pfam00119  16 LLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKKG---RKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINV 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   253 TLALSFSIFIGITIVGFQRHGL--HFFSFLLPAgVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFA 330
Cdd:pfam00119  93 TLALALIVFLLVHYYGIKKHGLggYFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLI 171

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 15226144   331 WTMLCMNdifyFIGALGPLFIVLALTGLELGVAILQAYVFTILICIYLN 379
Cdd:pfam00119 172 FALLSAG----FLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 185-383 1.58e-50

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 168.71  E-value: 1.58e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144 185 LVPNAWQSLVELLYDFVLNLVKEQIGGLSgnvkQMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGI 264
Cdd:COG0356  26 LVPGGLQNFVEMLVEFVRNQVKDTIGKKG----RKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLV 101

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144 265 TIVGFQRHGL-HFFSFLLPAGVPlPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFawtmlcmndIFYFI 343
Cdd:COG0356 102 HYYGIKKKGLgGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGL---------APFLL 171

                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 15226144 344 GALGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 383
Cdd:COG0356 172 LGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
 
Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 135-382 4.64e-70

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 219.39  E-value: 4.64e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   135 PLDQFEIVPLIPMHIGNFYFSFtnpslfmlltlsFFLLLIHFVTKKGGGNLVPNAWQSLVELLYDFVLNLVKEQIGGLSG 214
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLIL------------LLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKG 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   215 NvkqmFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLV 294
Cdd:TIGR01131  69 K----FFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLV 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   295 LLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNdIFYFIgalgpLFIVLALTGLELGVAILQAYVFTILI 374
Cdd:TIGR01131 145 IIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSA-IFALL-----LLILVALIILEIFVAFIQAYVFTLLT 218


                  ....*...
gi 15226144   375 CIYLNDAI 382
Cdd:TIGR01131 219 CLYLNDAL 226
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 133-385 3.50e-62

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 199.85  E-value: 3.50e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  133 ASPLDQFEIVPL--IPMHIGNFYFSFTNPSLFMLLTLSFFLLLIHfvtkkgGGNLVPNAWQSLVELLYDFVLNLVKEQIG 210
Cdd:MTH00175   3 AAYFDQFNIIRLitIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLK------GDKLIPNRWQSIMELIYLNIRSVVHDNLG 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  211 GlsgnVKQMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLA 290
Cdd:MTH00175  77 K----SGQKYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  291 PFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYfigALGPLFIVLALTGLELGVAILQAYVF 370
Cdd:MTH00175 153 PFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIIL---SLFPMLIMIFITLLEMAVAVIQAYVF 229

                        250
                 ....*....|....*
gi 15226144  371 TILICIYLNDAINLH 385
Cdd:MTH00175 230 CLLTTIYLGDTIALH 244
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 218-379 9.83e-59

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 187.61  E-value: 9.83e-59
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144 218 QMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLE 297
Cdd:cd00310   2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144 298 LISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLcmndifyFIGALGPLFIVLALTGLELGVAILQAYVFTILICIY 377
Cdd:cd00310  82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLL-------SSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154


                ..
gi 15226144 378 LN 379
Cdd:cd00310 155 IS 156
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 132-385 7.13e-58

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 188.33  E-value: 7.13e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  132 AASPLDQFEIVPLIPmhignfyfsFTNPSLFMLLTLSFFLLLIHFVtkkgggNLVPNAWQSLVELLYDFVLNLVKEQIGg 211
Cdd:MTH00172   2 SSSYFDQFNIVWLIG---------LTNSSIMMILVIIVVLLLFKGI------KLIPKRWQSIIEIIYNHFHGVVKDNLG- 65

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  212 lsgNVKQMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAP 291
Cdd:MTH00172  66 ---NEGLKYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAP 142

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  292 FLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFyfigALGPLFIVLALTGLELGVAILQAYVFT 371
Cdd:MTH00172 143 LLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLCASGFL----SLFPLLIMVFITLLEIAVAVIQAYVFC 218

                        250
                 ....*....|....
gi 15226144  372 ILICIYLNDAINLH 385
Cdd:MTH00172 219 LLTTIYLADTIVLH 232
ATP-synt_A pfam00119
ATP synthase A chain;
176-379 3.45e-57

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 185.77  E-value: 3.45e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   176 FVTKKGGGNLVPNAWQSLVELLYDFVLNLVKEQIGGLSGnvkQMFFPCILVTFLFLLFCNLQGMI---PYSFTVTSHFLI 252
Cdd:pfam00119  16 LLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKKG---RKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINV 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144   253 TLALSFSIFIGITIVGFQRHGL--HFFSFLLPAgVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFA 330
Cdd:pfam00119  93 TLALALIVFLLVHYYGIKKHGLggYFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLI 171

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 15226144   331 WTMLCMNdifyFIGALGPLFIVLALTGLELGVAILQAYVFTILICIYLN 379
Cdd:pfam00119 172 FALLSAG----FLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 185-383 1.58e-50

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 168.71  E-value: 1.58e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144 185 LVPNAWQSLVELLYDFVLNLVKEQIGGLSgnvkQMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGI 264
Cdd:COG0356  26 LVPGGLQNFVEMLVEFVRNQVKDTIGKKG----RKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLV 101

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144 265 TIVGFQRHGL-HFFSFLLPAGVPlPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFawtmlcmndIFYFI 343
Cdd:COG0356 102 HYYGIKKKGLgGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGL---------APFLL 171

                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 15226144 344 GALGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 383
Cdd:COG0356 172 LGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 185-385 1.25e-47

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 161.50  E-value: 1.25e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  185 LVPNAWQSLVELLYDFVLNLVKEQIGGLsgnvKQMFFPCILVTFLFLLFCNLQGMIP-YSFTVTSHFLITLALSFSIFIG 263
Cdd:PRK05815  41 GVPGGLQNFVEMIVEFVRGQVKDNIGGK----GKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVL 116

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  264 ITIVGFQRHGL-HFFSFLLPAGVPlplapFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLcmndifyf 342
Cdd:PRK05815 117 VIYYGIKKKGLgGYLKEFYLQPHP-----LLLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGL-------- 183

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 15226144  343 IGALGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 385
Cdd:PRK05815 184 LLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 133-385 1.87e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 138.53  E-value: 1.87e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  133 ASPLDQFEIVPL--IPMHIGNFYFS--FTNPSLFMLLTLSFFLLLIHFVTKKGGGNLVPNAWQSLVELLYDFVLNLVKEQ 208
Cdd:MTH00174   3 AAYFDQFNIIPIfsIWVYFLSFWINgeFFCFTNTFFMMSFAVFLFYTIGAKGNNNTLVPNRILVGLELIYSHFYTVLKDN 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  209 IGGLSGNvkqmFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLP 288
Cdd:MTH00174  83 LGNKGGN----YLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLA 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  289 LAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNdifYFIGALGPLFIVLALTGLELGVAILQAY 368
Cdd:MTH00174 159 LAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTG---ILIGSFVPFAILIFVTILEMAVAIIQAY 235

                        250
                 ....*....|....*..
gi 15226144  369 VFTILICIYLNDAINLH 385
Cdd:MTH00174 236 VFTLLTIVYLRDTVELH 252
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 185-380 1.19e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 132.60  E-value: 1.19e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  185 LVPNAWQSLVELLYDFVLNLVKEQIGGLSGNVKQMFfpciLVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGI 264
Cdd:MTH00157  37 LIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIF----ISLFSFILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSF 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  265 TIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGfawTMLCMNDIFYFIG 344
Cdd:MTH00157 113 MLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGN---TGPSLSSMILSIL 189

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 15226144  345 algpLFIVLALTGLELGVAILQAYVFTILICIYLND 380
Cdd:MTH00157 190 ----ILIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 204-379 1.94e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 121.59  E-value: 1.94e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  204 LVKEQIGGLSGNVKQMFFP-------CILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHF 276
Cdd:MTH00179  46 LQSWFFGSFTFQLMQPINKkghkwavLFLSLMLFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIA 125

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  277 FSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIgalgPLFIVLALT 356
Cdd:MTH00179 126 LAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISSAVFVLMNFMGMVALL----TLLVLFLLT 201

                        170       180
                 ....*....|....*....|...
gi 15226144  357 GLELGVAILQAYVFTILICIYLN 379
Cdd:MTH00179 202 LLEVAVAMIQAYVFVLLLSLYLQ 224
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 203-380 3.01e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 121.29  E-value: 3.01e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  203 NLVKEQIGGLSGNVKQMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLP 282
Cdd:MTH00176  54 TFLPEMILRSNGSYILGSASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVP 133

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  283 AGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGALGPLFIVLaltgLELGV 362
Cdd:MTH00176 134 QGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFM----FEIAV 209

                        170
                 ....*....|....*...
gi 15226144  363 AILQAYVFTILICIYLND 380
Cdd:MTH00176 210 CMIQAYVFTLLLSLYLDE 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 221-380 5.35e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 117.66  E-value: 5.35e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  221 FPCILVT-FLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELI 299
Cdd:MTH00173  71 FSLLLSSlFLFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETV 150

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  300 SYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFyfiGALGPLFIVLALTGLELGVAILQAYVFTILICIYLN 379
Cdd:MTH00173 151 SILIRPLTLTVRLLANISAGHIVLTLIGNYLSSSLFSSSVV---SLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSD 227


                 .
gi 15226144  380 D 380
Cdd:MTH00173 228 E 228
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 217-378 5.85e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 109.53  E-value: 5.85e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  217 KQMFFP--------CILVT--FLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVP 286
Cdd:MTH00120  56 KQLMLPlnkkghkwALILTslMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTP 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  287 LPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFyfigALGPLFIVLALTGLELGVAILQ 366
Cdd:MTH00120 136 TPLIPALILIETISLLIRPLALGVRLTANLTAGHLLIQLISTATLNLLPTMPTL----SLLTLIILLLLTILELAVAMIQ 211

                        170
                 ....*....|..
gi 15226144  367 AYVFTILICIYL 378
Cdd:MTH00120 212 AYVFVLLLSLYL 223
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 184-378 9.72e-28

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 108.91  E-value: 9.72e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  184 NLVPNAWQSLVELLYDFVLNLVKEQIGGLSGNVKQMFFPcilvTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIG 263
Cdd:MTH00035  40 NWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTT----VFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMS 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  264 ITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWtmLCMNDIFYFI 343
Cdd:MTH00035 116 VNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAANLTAGHLLIFLLSTAIW--ELSNSPLISI 193

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 15226144  344 galGPLFIVLALTGLELGVAILQAYVFTILICIYL 378
Cdd:MTH00035 194 ---ITLIIFFLLFILEIGVACIQAYVFTALVHFYL 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 228-378 2.41e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 105.34  E-value: 2.41e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  228 FLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALS 307
Cdd:MTH00132  77 MLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLA 156

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15226144  308 LGIRLFANMMAGHSLVKILSGFAWTMLCMNDIfyfIGALGPLFIVLaLTGLELGVAILQAYVFTILICIYL 378
Cdd:MTH00132 157 LGVRLTANLTAGHLLIQLIATAAFVLLPLMPT---VAILTATLLFL-LTLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 200-380 5.19e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 104.43  E-value: 5.19e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  200 FVLNLVKEQIGGLSGNVKQMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSF 279
Cdd:MTH00005  53 PPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAH 132

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  280 LLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGH---SLVKILSGFAWtmlcmndiFYFIGALGPLFIVLALT 356
Cdd:MTH00005 133 LLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHivlSLIGIYAASAL--------FSSISSTILLILTQMGY 204

                        170       180
                 ....*....|....*....|....*
gi 15226144  357 GL-ELGVAILQAYVFTILICIYLND 380
Cdd:MTH00005 205 ILfEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 229-378 7.67e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 103.89  E-value: 7.67e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  229 LFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSL 308
Cdd:MTH00073  78 VFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLAL 157

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  309 GIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGALgplfIVLALTGLELGVAILQAYVFTILICIYL 378
Cdd:MTH00073 158 GVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMI----VLFLLTLLEIAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 228-380 2.87e-25

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 102.34  E-value: 2.87e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  228 FLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALS 307
Cdd:MTH00101  76 ILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMA 155

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15226144  308 LGIRLFANMMAGHSLVKILSGFAWTMLCMNdifyFIGALGPLFIVLALTGLELGVAILQAYVFTILICIYLND 380
Cdd:MTH00101 156 LAVRLTANITAGHLLIHLIGGATLALMSIS----TTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHD 224
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 179-373 2.19e-21

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 94.04  E-value: 2.19e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  179 KKGGGNLVPNAWQSLVELLYDFV-LNLVKEQIGglSGNVKqmFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALS 257
Cdd:PRK13419 132 KKMTKSQAPKGLANAMEALVEFIrLDVAKSNIG--HGYEK--FLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLA 207

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  258 FSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHslVKILSGFAWTMLCMN 337
Cdd:PRK13419 208 VFTFFITQYAAIKAHGIKGYLAHLTGGTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGH--IVILSLIFISFILKS 285

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 15226144  338 DIFYFIGALG-PLFIVLaltgLELGVAILQAYVFTIL 373
Cdd:PRK13419 286 YIVAVAVSVPfAIFIYL----LELFVAFLQAYIFTML 318
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 185-383 5.29e-14

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 70.49  E-value: 5.29e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  185 LVPNAWQSLVELLYDFVLNLVKEQIGGLSGNVKqmffPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGI 264
Cdd:PRK13421  46 LAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYR----ALIGTLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLAT 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  265 TIVGFQRHGL--HFFSFLLPAGVPLPLapflvllELISYCFRALSLGIRLFANMMAGHSLVKIlsgfawtmlcmndifyf 342
Cdd:PRK13421 122 IYYGVRARGVrgYLATFAEPTWVMIPL-------NLVEQLTRTFSLIVRLFGNVMSGVFVIGI----------------- 177

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 15226144  343 IGALGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 383
Cdd:PRK13421 178 VLSLAGLLVPIPLMALDLLTGAVQAYIFAVLAMVFIGAAVS 218
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 220-385 1.45e-12

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 67.99  E-value: 1.45e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  220 FFPCILVTFLFLLFCNLQGMIPY-----------------------------------SFTVTSHFLITLALSFSIFIGI 264
Cdd:PRK13417 157 YYHYIFTLFFFILFCNLMGLVPSvgeltvvasdygglvalgvmdhtphalptfakvwsGITVTGDISVTMTLALLTMFLI 236

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  265 TIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELI-SYCFRALSLGIRLFANMMAGHSLVKILSGFawtmlcmndIFYFI 343
Cdd:PRK13417 237 YGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILALMGF---------IFQFQ 307

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 15226144  344 GALGPLFIVLA---LTGLELGVAILQAYVFTILICIYLNDAINLH 385
Cdd:PRK13417 308 SWGIVPVSVIGsglIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH 352
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 226-379 2.55e-11

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 62.30  E-value: 2.55e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  226 VTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGiTIVGFQRHGLhFFSFLLPAGVPLPLAPF-LVLLELISYCFR 304
Cdd:MTH00087  57 FTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLS-TFLSFLSKSE-KFSVYLSKGSDSFLKTFsMLFVEIVSELSR 134

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15226144  305 ALSLGIRLFANMMAGHSLVKILSGFAwtmlcmndifyfigaLGPLFIVLALTGLELGVAILQAYVFTILICIYLN 379
Cdd:MTH00087 135 PLALTLRLTVNLMVGHLISSLLNFLG---------------EKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLN 194
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 185-385 3.22e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 62.45  E-value: 3.22e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  185 LVPNAWQSLVELLYDFVLNLVKEQIGGLSGNVkqmfFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGI 264
Cdd:PRK13420  43 LDPGRFQVALEGVVSTIEDAIKEVLPRHARLV----LPFVGTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSV 118

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  265 TIVGFQRHGL--HFFSFLLPagvplplAPFLVLLELISYCFRALSLGIRLFANMMA---GHSLVKILSGFawtmlcmndi 339
Cdd:PRK13420 119 HWFGIRAEGLreYLKHYLSP-------SPFLLPFHLISEITRTLALAVRLFGNIMSlelAALLVLLVAGF---------- 181

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 15226144  340 fyfigaLGPLFIVLaltgLELGVAILQAYVFTILICIYLNDAINLH 385
Cdd:PRK13420 182 ------LVPVPILM----LHIIEALVQAYIFGMLALIYIAGGIQAH 217
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 220-343 2.48e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 44.10  E-value: 2.48e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  220 FFPCILVTFLFLLFcnlqgMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELI 299
Cdd:MTH00050  27 SVVLFIVLFLFLLY-----RLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETI 101

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 15226144  300 SYCFRALSLGIRLFANMMAGhslvkILSGFAWTMLCMNDIFYFI 343
Cdd:MTH00050 102 SYIIRPVVLILRPFINISLG-----CFGGVALGNLCFISYWWFL 140
atpI CHL00046
ATP synthase CF0 A subunit
 186-373 3.06e-05

ATP synthase CF0 A subunit


Pssm-ID: 176987  Cd Length: 228  Bit Score: 44.92  E-value: 3.06e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  186 VPNAWQSLVELLYDFVLNLVKEQIGGLSgnvKQMFFPCILVTFLFLLFCNLQG-MIPYSF---------TVTSHFLITLA 255
Cdd:CHL00046  50 IPTGGQNFFEYVLEFIRDLAKTQIGEEE---YRPWVPFIGTMFLFIFVSNWSGaLLPWKLielphgelaAPTNDINTTVA 126

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226144  256 LSFSIFIGITIVGFQRHGLHFFS-FLLPAGVPLPLApflvLLELISycfRALSLGIRLFANMMAGHSLVKILSgfawtml 334
Cdd:CHL00046 127 LALLTSVAYFYAGLSKKGLGYFGkYIQPTPILLPIN----ILEDFT---KPLSLSFRLFGNILADELVVAVLV------- 192

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 15226144  335 cmndifyfigALGPLFIVLALTGLELGVAILQAYVFTIL 373
Cdd:CHL00046 193 ----------SLVPLVVPIPVMFLGLFTSGIQALIFATL 221
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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