NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|42561921|ref|NP_172621|]
View 

Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
TauE super family cl46157
Sulfite exporter TauE/SafE; This is a family of integral membrane proteins where the alignment ...
 249-343 6.44e-03

Sulfite exporter TauE/SafE; This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.


The actual alignment was detected with superfamily member COG0730:

Pssm-ID: 480497  Cd Length: 250  Bit Score: 37.87  E-value: 6.44e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561921 249 GGMLISPLLLQIGIAPEVTAATCSFMVLFSSSMSAIQYLLLGMEHAGTAAIFALVCFVASLVGLMVVKKViakygRASII 328
Cdd:COG0730  25 GGLITVPALLLFGLPPAVAVGTSLLAVVFTSLSGALAHRRRGNVDWRLLLPLALGALIGALLGALLLLLL-----PADVL 99

                        90
                ....*....|....*
gi 42561921 329 VFAVGIVMALSTVLM 343
Cdd:COG0730 100 KLLFGVLLLLVALLM 114
 
Name Accession Description Interval E-value
TauE COG0730
Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport ...
 249-343 6.44e-03

Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport and metabolism];


Pssm-ID: 440494  Cd Length: 250  Bit Score: 37.87  E-value: 6.44e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561921 249 GGMLISPLLLQIGIAPEVTAATCSFMVLFSSSMSAIQYLLLGMEHAGTAAIFALVCFVASLVGLMVVKKViakygRASII 328
Cdd:COG0730  25 GGLITVPALLLFGLPPAVAVGTSLLAVVFTSLSGALAHRRRGNVDWRLLLPLALGALIGALLGALLLLLL-----PADVL 99

                        90
                ....*....|....*
gi 42561921 329 VFAVGIVMALSTVLM 343
Cdd:COG0730 100 KLLFGVLLLLVALLM 114
 
Name Accession Description Interval E-value
TauE COG0730
Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport ...
 249-343 6.44e-03

Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport and metabolism];


Pssm-ID: 440494  Cd Length: 250  Bit Score: 37.87  E-value: 6.44e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561921 249 GGMLISPLLLQIGIAPEVTAATCSFMVLFSSSMSAIQYLLLGMEHAGTAAIFALVCFVASLVGLMVVKKViakygRASII 328
Cdd:COG0730  25 GGLITVPALLLFGLPPAVAVGTSLLAVVFTSLSGALAHRRRGNVDWRLLLPLALGALIGALLGALLLLLL-----PADVL 99

                        90
                ....*....|....*
gi 42561921 329 VFAVGIVMALSTVLM 343
Cdd:COG0730 100 KLLFGVLLLLVALLM 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH