NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|30681218|ref|NP_172426|]
View 

Pectinacetylesterase family protein [Arabidopsis thaliana]

Protein Classification

pectinacetylesterase family protein( domain architecture ID 10505531)

pectinacetylesterase (PAE) family protein such as Arabidopsis thaliana pectin acetylesterase, which hydrolyzes acetyl esters in homogalacturonan regions of pectin, and human palmitoleoyl-protein carboxylesterase NOTUM, which acts as a key negative regulator of the Wnt signaling pathway

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PAE pfam03283
Pectinacetylesterase;
36-383 0e+00

Pectinacetylesterase;


:

Pssm-ID: 460874  Cd Length: 345  Bit Score: 561.84  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218    36 NANVLMVGLTLVQAAAAKGAVCLDGSVPGYHLCRGYGSGANNWIIQLQGGAWCDSIQNCQSRKGSGYGSSTLMEKELAFL 115
Cdd:pfam03283   3 QAEGLDVPLTLVKNAVAKGAVCLDGSPPGYHFDRGFGSGANNWLIHLEGGGWCNNLESCLSRKKTRLGSSKYMEKQISFS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218   116 GLLSNKAAENPDFYNWNKVKVRYCDGASFDGDSE--NKAAQLQYRGKRIFLAVMEDLMEKGMRQAKQALLSGCSSGGLSA 193
Cdd:pfam03283  83 GILSNNQSENPDFYNWNRVKIRYCDGASFTGDVEpvDPATNLYFRGQRIWQAIIEDLLAKGMKNAKNALLSGCSAGGLAA 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218   194 ILRCDDFNNLFPPTTTVKCMSDAGFFLDAVDVSGGHSLRRMYSGVVNTQGLQNTLPPTCTSHIKPFLCFFPQYIINQVKT 273
Cdd:pfam03283 163 ILHCDYFRDLLPANAKVKCLSDAGFFLDAKDISGTRHIRSFYSGVVTLQGSAKNLPESCTSRLNPWKCFFPQYVIPYIKT 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218   274 PLFILNSGFDSWQIGNSLappsadksGSWHNCSFSF-RCTASQMHFLEGFKMSMLDALKTFSKFSKNGVLITSGWAHCQA 352
Cdd:pfam03283 243 PLFILNSAYDSWQIQNIL--------GSWCNCKLDIqNCSPSQLQFLQGFRSEFLNALKGFGNSPNNGMFINSCFAHCQS 314

                         330       340       350
                  ....*....|....*....|....*....|.
gi 30681218   353 ERQDTWFPGYSGAGKAKGIAVAVGDWYFERT 383
Cdd:pfam03283 315 ESQDTWFADDSPRISNKTIAKAVGDWYFDRS 345
 
Name Accession Description Interval E-value
PAE pfam03283
Pectinacetylesterase;
36-383 0e+00

Pectinacetylesterase;


Pssm-ID: 460874  Cd Length: 345  Bit Score: 561.84  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218    36 NANVLMVGLTLVQAAAAKGAVCLDGSVPGYHLCRGYGSGANNWIIQLQGGAWCDSIQNCQSRKGSGYGSSTLMEKELAFL 115
Cdd:pfam03283   3 QAEGLDVPLTLVKNAVAKGAVCLDGSPPGYHFDRGFGSGANNWLIHLEGGGWCNNLESCLSRKKTRLGSSKYMEKQISFS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218   116 GLLSNKAAENPDFYNWNKVKVRYCDGASFDGDSE--NKAAQLQYRGKRIFLAVMEDLMEKGMRQAKQALLSGCSSGGLSA 193
Cdd:pfam03283  83 GILSNNQSENPDFYNWNRVKIRYCDGASFTGDVEpvDPATNLYFRGQRIWQAIIEDLLAKGMKNAKNALLSGCSAGGLAA 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218   194 ILRCDDFNNLFPPTTTVKCMSDAGFFLDAVDVSGGHSLRRMYSGVVNTQGLQNTLPPTCTSHIKPFLCFFPQYIINQVKT 273
Cdd:pfam03283 163 ILHCDYFRDLLPANAKVKCLSDAGFFLDAKDISGTRHIRSFYSGVVTLQGSAKNLPESCTSRLNPWKCFFPQYVIPYIKT 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218   274 PLFILNSGFDSWQIGNSLappsadksGSWHNCSFSF-RCTASQMHFLEGFKMSMLDALKTFSKFSKNGVLITSGWAHCQA 352
Cdd:pfam03283 243 PLFILNSAYDSWQIQNIL--------GSWCNCKLDIqNCSPSQLQFLQGFRSEFLNALKGFGNSPNNGMFINSCFAHCQS 314

                         330       340       350
                  ....*....|....*....|....*....|.
gi 30681218   353 ERQDTWFPGYSGAGKAKGIAVAVGDWYFERT 383
Cdd:pfam03283 315 ESQDTWFADDSPRISNKTIAKAVGDWYFDRS 345
 
Name Accession Description Interval E-value
PAE pfam03283
Pectinacetylesterase;
36-383 0e+00

Pectinacetylesterase;


Pssm-ID: 460874  Cd Length: 345  Bit Score: 561.84  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218    36 NANVLMVGLTLVQAAAAKGAVCLDGSVPGYHLCRGYGSGANNWIIQLQGGAWCDSIQNCQSRKGSGYGSSTLMEKELAFL 115
Cdd:pfam03283   3 QAEGLDVPLTLVKNAVAKGAVCLDGSPPGYHFDRGFGSGANNWLIHLEGGGWCNNLESCLSRKKTRLGSSKYMEKQISFS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218   116 GLLSNKAAENPDFYNWNKVKVRYCDGASFDGDSE--NKAAQLQYRGKRIFLAVMEDLMEKGMRQAKQALLSGCSSGGLSA 193
Cdd:pfam03283  83 GILSNNQSENPDFYNWNRVKIRYCDGASFTGDVEpvDPATNLYFRGQRIWQAIIEDLLAKGMKNAKNALLSGCSAGGLAA 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218   194 ILRCDDFNNLFPPTTTVKCMSDAGFFLDAVDVSGGHSLRRMYSGVVNTQGLQNTLPPTCTSHIKPFLCFFPQYIINQVKT 273
Cdd:pfam03283 163 ILHCDYFRDLLPANAKVKCLSDAGFFLDAKDISGTRHIRSFYSGVVTLQGSAKNLPESCTSRLNPWKCFFPQYVIPYIKT 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30681218   274 PLFILNSGFDSWQIGNSLappsadksGSWHNCSFSF-RCTASQMHFLEGFKMSMLDALKTFSKFSKNGVLITSGWAHCQA 352
Cdd:pfam03283 243 PLFILNSAYDSWQIQNIL--------GSWCNCKLDIqNCSPSQLQFLQGFRSEFLNALKGFGNSPNNGMFINSCFAHCQS 314

                         330       340       350
                  ....*....|....*....|....*....|.
gi 30681218   353 ERQDTWFPGYSGAGKAKGIAVAVGDWYFERT 383
Cdd:pfam03283 315 ESQDTWFADDSPRISNKTIAKAVGDWYFDRS 345
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH