|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
8-424 |
1.58e-116 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 346.53 E-value: 1.58e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 8 FSSFITGFVVTFIFLLIFySSIWVSDSSMVMVGVKYyLCDGLVIIDTLSCLMIFLT------SIIWLVLWLVGSKDIVLF 81
Cdd:MTH00062 1 FYFFSVGFFLGFLLLLLF-CLLYSSGVGCCILVVNN-VFNGLFIFDSLSFYLILLVlflglySQVMFYNLLSGVSRFFLF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 82 ISVFSAMITYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVILWD 161
Cdd:MTH00062 79 LSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 162 KGDmCDSYGAFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCY 241
Cdd:MTH00062 159 SDD-SVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 242 SVVYLVAAVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSRNWGILVKI 321
Cdd:MTH00062 238 SVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 322 FGGGLIMHFIMGFVFLNVCGFPPALQFFGELWLVINYITLgdIISLLLVSIYIFSGSIIGFIIYGLVICSPINTSYEYSg 401
Cdd:MTH00062 318 INGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGV--LVYLLFWCFYLFFGGLVPLILLGHLLIRSESYESINV- 394
|
410 420
....*....|....*....|...
gi 12249147 402 GLDNFLFCIMYLSLLNLILFIVL 424
Cdd:MTH00062 395 SNYSYLFFLIFLVFWCYLGFLVL 417
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
52-314 |
1.77e-27 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 114.02 E-value: 1.77e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 52 IDTLSCLMIFLTSIIWLVLWLVGSKDI--------VLFISVFSAMI-TYVVSNSLVFWFFYELSIISaLYMLIVGSPYPE 122
Cdd:COG1008 80 VDGISLPLVLLTALLTPLAILASWNEIkkrpklyyALLLLLEAGMIgVFLALDLFLFYVFWELMLIP-MYFLIGIWGGER 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 123 RYISSWYFGGYILLSSVPLLLGICFIGLNSG--SFNVILWDKGDMCDSYG--AFLLIIIMFLTKIPVFPFHGWLPLVHAE 198
Cdd:COG1008 159 RIYAAIKFFLYTLAGSLLMLVAILALYFLAGalTFDIAELAAAPLPLTAQllLFLAFFIAFAVKVPMFPFHTWLPDAHVE 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 199 ASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSVVYLV----AAVFECDSKRWLAYLSLSH---ILIGV 271
Cdd:COG1008 239 APTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIygalVALAQTDLKRLIAYSSVSHmgfVLLGI 318
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 12249147 272 CILLTSTYCGdylAFIYCLGHGLSVALLFMVIWFGYEISGSRN 314
Cdd:COG1008 319 FALNPLGLQG---AVLQMVSHGLITAALFLLVGVLYDRTHTRD 358
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
52-313 |
2.01e-22 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 99.12 E-value: 2.01e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 52 IDTLSCLMIFLTSIIWLVLWLVGSKDI--------VLFISVFSAMI-TYVVSNSLVFWFFYELSIIsALYMLIVGSPYPE 122
Cdd:PRK05846 80 VDGISLLLVVLTALLTPLAVLASWEEIkkrvkfymAALLWLEGGVIgVFAALDLLLFYVFFEAMLI-PMYFLIGVWGGKN 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 123 RYISSWYFGGYILLSSVPLLLGICFIGL----NSGSFNVILWDKGDMCDS--YGAFLLIIIMFLTKIPVFPFHGWLPLVH 196
Cdd:PRK05846 159 RIYAATKFFLYTLLGSLLMLVAIIYLVVvyynATGTFDIADLLNLPLPPGvqYWLFLAFFIAFAVKMPMFPLHTWLPDAH 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 197 AEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSVVYLV----AAVFECDSKRWLAYLSLSH---ILI 269
Cdd:PRK05846 239 VQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIygalVALAQTDIKKLIAYSSISHmgfVTL 318
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 12249147 270 GVCILLTSTYCGdylAFIYCLGHGLSVALLFMVIWFGYEISGSR 313
Cdd:PRK05846 319 GIFAGNQLGIQG---AIFQMISHGLSSAALFLLVGVLYDRLHTR 359
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
52-314 |
2.67e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 98.86 E-value: 2.67e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 52 IDTLSCLMIFLTSIIWLV----LWLVGSKDIVLFISVFSAM-----ITYVVSNSLVFWFFYELSIISaLYMLIVGSPYPE 122
Cdd:TIGR01972 75 VDGISLLLVLLTALLTLLailaSWESIQKRVKEFYALLLLLeagviGVFLALDLFLFYVFWEAMLIP-MYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 123 RYISSWYFGGYILLSSVPLLLGICFIG-LNSGSFNVILWDKGDMCDS--YGAFLLIIIMFLTKIPVFPFHGWLPLVHAEA 199
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELLNLPLPFGvqTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 200 SSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSVVYLV----AAVFECDSKRWLAYLSLSH---ILIGVC 272
Cdd:TIGR01972 234 PTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIygalIALAQTDIKRLIAYSSISHmgfVLLGIF 313
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 12249147 273 ILLTSTYCGdylAFIYCLGHGLSVALLFMVIWFGYEISGSRN 314
Cdd:TIGR01972 314 SFNELGISG---AVFQMISHGLITAALFLLVGVLYERAHTRD 352
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
51-412 |
8.43e-22 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 96.51 E-value: 8.43e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 51 IIDTLSCLMIFLTSIIWLVLWLVGSKD----IVLFISVFSAMITYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYIS 126
Cdd:MTH00094 35 FFDSFVFVLLIFMMVFILGLVLLSEKNfnllILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINS 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 127 SWYFGGYILLSSVPLLLGIcfiglnSGSFNVILWDKGDMCDSYGAFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSII 206
Cdd:MTH00094 115 SYYLLFYAAFFSFPFLFVY------LKNFFFFSLCYFDFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASML 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 207 LSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSVVYLVAAVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAF 286
Cdd:MTH00094 189 LAGLLLKLGTAGFLRILGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 287 IYCLGHGLSVALLFMVIWFGYEISGSRNWGILVKIFGGGLIMHFIMGFVFLNVCGFPPALQFFGELWLVINYITLGDIIS 366
Cdd:MTH00094 269 MMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSF 348
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 12249147 367 LLLVSIYIFSGSIIGFIIYGLVICSPINTSYEYSGGLDNFLFCIMY 412
Cdd:MTH00094 349 FFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMMF 394
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-375 |
9.90e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 96.37 E-value: 9.90e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 52 IDTLSCLMIFLTSIIWLVLWLVGSKDI-----------VLFISVFSAMITYVVSNSLVFWFFYELSIISAlYMLIVGSPY 120
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMrherrgrrfypLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLAS-YGLVALGGT 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 121 PERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNV----ILWDKGDMCDSYGAFLLIIIMFLTKIPVFPFHGWLPLVH 196
Cdd:COG0651 153 KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMadlaARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAY 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 197 AEASSPVSIILSGYIMKLGLVGLVRLCGWLL-IDYIYYFSTFLLCYSVVYLVAAVF----ECDSKRWLAYLSLSH---IL 268
Cdd:COG0651 233 PAAPSPVSALLSGLLTKVGVYAILRVLTLLFgADPALFLGTLLLVLGLLTMLVGALgalaQRDLKRLLAYSSVSQigyIL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 269 IGVCIlltSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSRNwgiLVKIFGGGLIMHFIMGFVF---LNVCGFPPA 345
Cdd:COG0651 313 LGLGL---GTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRD---LDKLGGLGKRMPLTAAAFLigaLALAGLPPL 386
|
330 340 350
....*....|....*....|....*....|....*..
gi 12249147 346 LQFFGELWLVINYITLGD-------IISLLLVSIYIF 375
Cdd:COG0651 387 SGFVSKWLLLQAALEAGAwllaavlLLSSLLTLAYFV 423
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
15-422 |
3.20e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 95.39 E-value: 3.20e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 15 FVVTFIFLLIFYSSIWV-SDSSMVMVGVKYYLCdglviIDTLSCLMIFLTsiIWLVLWLV--------------GSKDIV 79
Cdd:MTH00206 24 STTFFSFLIALLFLLWFkWSSEVGWSFSNLYLS-----YDPLSSPLVILS--CWLLPLMFlasqnhmknepinrQRIYIT 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 80 LFISVFSAMI-TYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVI 158
Cdd:MTH00206 97 LLIVLQLFLIlFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 159 LWDKGDMCDSYGAF--LLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRL---CGWLLIDYIYY 233
Cdd:MTH00206 177 ILYFSKLTTWNNNLwwLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIiliLGPSTKLSSYF 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 234 FSTFLLCYSVVYLVAAVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSR 313
Cdd:MTH00206 257 FIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTR 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 314 NWGILVKIFGGGLIMHFIMGFVFLNVCGFPPALQFFGELWLVINYITLGDIISLLLVSIYIFSGsIIGFIIYGLVICSPI 393
Cdd:MTH00206 337 TILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTA-IYSLYMFVMTQHGKT 415
|
410 420
....*....|....*....|....*....
gi 12249147 394 NTSYEYSGGLDNFLFCIMYLSLLNLILFI 422
Cdd:MTH00206 416 PNHLLSLSPSSTREHLLLFLHLFPVILLI 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
43-356 |
4.46e-20 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 91.44 E-value: 4.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 43 YYLCDGLVIIDTLSCLMIFLTSIIWLVLWLVGSKDIVLFISVFSAMI-----------TYVVSNSLVFWFFYELSIISAL 111
Cdd:MTH00150 13 YESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLlvlllclilvlAFSVSSLLMFYFFFEASLIPTL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 112 yMLIVGSPY-PERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNV-ILWDKGDMCDSYGAFLLIIIM-FLTKIPVFPF 188
Cdd:MTH00150 93 -LLILGWGYqPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMlLISSLRKLLSSMGLWGLLVFLaFLVKLPMYPF 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 189 HGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCGWLLIdYIYYFSTFLLCYSVVYLVAAVFEC----DSKRWLAYLSL 264
Cdd:MTH00150 172 HLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSL-SSSSFSIFLISLSLWGGVLTSLIClrqsDVKSLIAYSSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 265 SHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSRNwgilVKIFGGGLIMHFIMGFVFLNVC---- 340
Cdd:MTH00150 251 GHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRS----LFLSKGMLMLYPSLSLWWFLFCiinm 326
|
330
....*....|....*.
gi 12249147 341 GFPPALQFFGELWLVI 356
Cdd:MTH00150 327 AAPPSLNLLSEIMIFP 342
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
15-421 |
1.32e-19 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 90.21 E-value: 1.32e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 15 FVVTFIFLLIFYSSIWVSDSSMVMVGVkyYLCDGLVIIDTLSCLMIFLTSI-IWLVLWLVGSKDIVLFISVFSAMITYVV 93
Cdd:MTH00163 29 FLLSFLFMLLFSLSFYFSNISYFFGLD--LLSFGLILLSFWICMLMILSSEsVYKKNNYSNLFLFLILFLLIFLLLTFSS 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 94 SNSLVFWFFYELSIISALyMLIVGSPY-PERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVILWDKGDMCDSYGaF 172
Cdd:MTH00163 107 MNLLLFYIFFESSLIPTL-FLILGWGYqPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFLW-Y 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 173 LLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCGwLLIDYIYYFSTFLLCYSVVYLVAAVFE 252
Cdd:MTH00163 185 LSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMS-FFSKLGLKFNYIWISISLVGGVIVSLI 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 253 C----DSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSRNwgiLVKIFGGGLIM 328
Cdd:MTH00163 264 ClrqvDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRS---LLINKGLLNFM 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 329 HFIMGFVFLNVC---GFPPALQFFGELWLVINYITLGDIISLLLV---------SIYIFSGSIIGFIIYGLVICSPINTS 396
Cdd:MTH00163 341 PSMSLWWFLLSSsnmAAPPSLNLLGEISLINSLISWSKLSMIFLMllsffsaaySLYLYSYSQHGKYYSGLYSCSSGKVR 420
|
410 420
....*....|....*....|....*
gi 12249147 397 yeysggldNFLFCIMYLSLLNLILF 421
Cdd:MTH00163 421 --------EYLLLFLHWLPLNLLIL 437
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
97-371 |
2.39e-18 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 84.67 E-value: 2.39e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 97 LVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVILWDKGDMCD-----SYGA 171
Cdd:pfam00361 5 LLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssgLLLL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 172 FLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSVVYLVA--- 248
Cdd:pfam00361 85 FLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGsla 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 249 AVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIW-FGYEISGSRNWGILVKIFGGGLI 327
Cdd:pfam00361 165 ALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGsVIYRRVHTRNIRDYGGLAKTMPI 244
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 12249147 328 MHFIMGFVFLNVCGFPPALQFFGElWLVINYITLGDIISLLLVS 371
Cdd:pfam00361 245 LALVFLVAMLSLAGLPPTAGFLGK-FLILAAAVAASWIFLVLAG 287
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
52-314 |
5.50e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 85.91 E-value: 5.50e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 52 IDTLSCLMIFLTSIIWLVLWLVGSKDI-----------VLFISVFSAmitYVVSNSLVFWFFYELSIISaLYMLIVGSPY 120
Cdd:PRK06473 77 VDGLSLPLLVLNSLLTLIAIYSSDESIqrprfyyslllLLNAGVSGA---FLAQDLLLFFLFYELELIP-LYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 121 PERYISSWYFGGYILLSSVPLL---LGICFI-GLNSGSFNVILWDKGDMCDSYGAFLLIIIMFLTKIPVFPFHGWLPLVH 196
Cdd:PRK06473 153 QRRGYAATKFLLYTAISGILILvsfLGLVWLsGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAH 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 197 AEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSVVYLV----AAVFECDSKRWLAYLSLSHILIGVC 272
Cdd:PRK06473 233 VEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLygasCAIAQKDMKKMVAYSSIGHMGYILL 312
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 12249147 273 ILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSRN 314
Cdd:PRK06473 313 AAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRD 354
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-377 |
1.24e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 84.65 E-value: 1.24e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 8 FSSFITGFVVTFIFLLIFYSSIWVSDSSMVMVGVKYYLCDGLVIIDTLSCLMIFLTSIIWLVLWLVGSK-DIVLFISVFS 86
Cdd:MTH00205 21 WSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLfTVSVIMLLLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 87 AMITYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVILWDKGDMC 166
Cdd:MTH00205 101 LILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFS 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 167 DSYGAFLLIIIM--FLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLcGWLLIDYIYYFSTFLLCYSVV 244
Cdd:MTH00205 181 DFYLFLYWIFLMlaFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRI-TSMLYKLNSNFSELFFSISLW 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 245 YLVAAVFEC----DSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSRNwgilVK 320
Cdd:MTH00205 260 GGVMTGMIClrqvDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRS----ML 335
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 12249147 321 IFGGGLIMH--FIMGFVFLNVCGF--PPALQFFGELWLVINYITLGDIISLLLVSIYIFSG 377
Cdd:MTH00205 336 MNKGVLNTFpfLVLMWFLLISCNMaaPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSG 396
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
85-313 |
1.30e-16 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 81.33 E-value: 1.30e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 85 FSAMITYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNV-ILWDKG 163
Cdd:MTH00014 101 LILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMlMSSMEP 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 164 DMCDSYGAFLLIIIM-FLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCG---WLLIDYIYYFSTFLL 239
Cdd:MTH00014 181 PSIYLMNLWWLITILaFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSlfmHINKSLSAPFSSISL 260
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 12249147 240 CYSVVYLVAAVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSR 313
Cdd:MTH00014 261 VGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTR 334
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
58-337 |
2.72e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 77.40 E-value: 2.72e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 58 LMIFLTSIIWLVLW-----LVGSKDIVLFISVFSAMITYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGG 132
Cdd:MTH00217 88 LTALLTPICILISWnsikfLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFF 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 133 YILLSSVPLLLGICFIGLNSGS--FNVILWDKGDMCDSYGAFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGY 210
Cdd:MTH00217 168 YTFIGSVFMLLGIFTLYSYAGTtdYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGV 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 211 IMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSVVYLVAAVF----ECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAF 286
Cdd:MTH00217 248 LLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLttcrQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAI 327
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 12249147 287 IYCLGHGLSVALLFMVIWFGYEISGSRnwgiLVKIFGGGLIMHFIMGFVFL 337
Cdd:MTH00217 328 FLMLAHGLVSSALFIAVTFLYERHHTR----LIKYYRGMVITMPLFGILML 374
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
58-376 |
3.11e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 77.41 E-value: 3.11e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 58 LMIFLTSIIWLVLW-----LVGSKDIVLFISVFSAMITYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGG 132
Cdd:MTH00204 91 LTTLLIPICILISWksikfLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFF 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 133 YILLSSVPLLLGICFIGLNSGSFN--VILWDKGDMCDSYGAFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGY 210
Cdd:MTH00204 171 YTFAGSVFMLLGIFQLYSITGTTDyqILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGI 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 211 IMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSVVYLV-AAVFEC---DSKRWLAYLSLSHILIGVCILLTSTYCGDYLAF 286
Cdd:MTH00204 251 LLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIyGSLTTCrqvDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAV 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 287 IYCLGHGLSVALLFMVIWFGYEISGSRnwgiLVKIFGGGL----IMHFIMGFVFLNVCGFPPALQFFGELWLVINYITLG 362
Cdd:MTH00204 331 FLMLAHGFVSSALFIAVTFLYERHHTR----LIKYYRGLTltmpLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYS 406
|
330
....*....|....
gi 12249147 363 DIISLLLVSIYIFS 376
Cdd:MTH00204 407 LGLGVLVTSGMVWS 420
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
80-308 |
3.96e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 76.99 E-value: 3.96e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 80 LFISVFSAMI-TYVVSNSLVFWFFYELSIISaLYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVI 158
Cdd:PRK12561 92 LMLVLYSAQIgVFLAQDLLLFFLMWELELVP-VYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTFTFD 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 159 LWDKGdMCDSYGAFLLI-----IIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYY 233
Cdd:PRK12561 171 LAELG-AKSYPLALELLlyagfLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVY 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 234 FSTFLLCYSVVYLV----AAVFECDSKRWLAYLSLSH---ILIGVCILltsTYCGDYLAFIYCLGHGLSVALLFMVIWFG 306
Cdd:PRK12561 250 FAPALAILGVVNIIygalNAFAQDNVKRRLAYSSVSHmgfVLLGIAAF---TDLGISGAMLQMISHGLIAAALFFLTGVT 326
|
..
gi 12249147 307 YE 308
Cdd:PRK12561 327 YE 328
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-370 |
3.07e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 74.15 E-value: 3.07e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 50 VIIDTLSCLMIFLTSIIWLV----LWLVGSKDIVLFISVFSAMITYVV-----SNSLVFWFFYELSIISAlYMLIVGSPY 120
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAallyAIGYGEHRQTRFYALFLLLLAGLLgalltADLFNLFVFLEIMSLSS-YALVAMGGD 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 121 PERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVILWDK--GDMCDSYGAFLLIIIMFLTKIPVFPFHGWLPLVHAE 198
Cdd:PRK08375 152 RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 199 ASSPVSIILSGYIMKLGLVGLVRLcgWLLIDYIYYFSTFLLCYSVVYLV---------AAVFECDSKRWLAYLS---LSH 266
Cdd:PRK08375 232 APPVVTALLSGLVTKVAVYALIRI--YFTVFGGDFRFALGLGWLLAVLAllsmlvgslAALGQDDVKRVLAYSTvsqMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 267 ILIGVCILltsTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSRNwgiLVKIFGGGLIMHFIMGFVF---LNVCGFP 343
Cdd:PRK08375 310 ILLGLALL---TPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRR---LSELSGLGRRMPLTAAAFAvasLSLIGVP 383
|
330 340
....*....|....*....|....*..
gi 12249147 344 PALQFFGELWLVINYITLGDIISLLLV 370
Cdd:PRK08375 384 PTSGFVSKWYLVVGAVEAGQWLVLAVL 410
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
78-423 |
4.97e-14 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 73.47 E-value: 4.97e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 78 IVLFISVFSAMITYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNV 157
Cdd:MTH00044 98 SLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSI 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 158 ILWDKGDMCDSYGAFLLI-----IIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIY 232
Cdd:MTH00044 178 PLSELNWLTSLSSNSSSIwwifcILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSAN 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 233 YFSTFLLCY----SVVYLVAAVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYE 308
Cdd:MTH00044 258 NISFILIVFccwgALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYE 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 309 ISGSRNWGIlvkIFGGGLIMHfIMGFVFLNVC----GFPPALQFFGELwlvinyITLGDIISLLLVSIYIFSGSIIGFII 384
Cdd:MTH00044 338 RSGTRTLSI---TRGFKLITP-LLPLWWLIFCaanlGLPPLPNLIGEL------LIISSIISWSILSFPIIGLATVFGAI 407
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 12249147 385 YGLVICSPINTSYEYSGGLDNFLFC-----IMYLSLLNLILFIV 423
Cdd:MTH00044 408 YSLLIYQLTNSGSFPSWISNVSPISsrehlLIFLHLLPLILIII 451
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-300 |
1.37e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 72.29 E-value: 1.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 51 IIDTLSCLMIFLTSIIWLVLWLVG-SKDIVLFISVFSAMI------TYVVSNSLVFWFFYELSIISAlYMLIVgspYPER 123
Cdd:PRK07234 64 RADALSGYFILTNALVTLAVIFYCwESAKTRFFYAQLLILhgsvnaAFVCADLISLYVALEVLSIAT-FLLVA---YPRT 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 124 YISSWYFGGYILLSSVPLLL---GICFIGLNSGSFNVilwdKGDMCDSYGAFLLIIIMFLTKIPVFPFHGWLPLVHAEAS 200
Cdd:PRK07234 140 DRAIWVGLRYLFYSNVAMLFyliGAVLVYQANGTFAF----SGLATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 201 SPVSIILSGYIMKLGLVGLVRLCgwLLIDYIY----YFSTFLLCYSVVYlvaAVFECDSKRWLAYLSLSHILIgvcILLT 276
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCA--LDVPGLDlivrIFGVGTALLGVLF---ALLEKDLKRMLAFSTISQLGF---ILAA 287
|
250 260
....*....|....*....|....
gi 12249147 277 STYCGdylafIYCLGHGLSVALLF 300
Cdd:PRK07234 288 PLVGG-----LYALAHGLVKSTLF 306
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
69-376 |
1.64e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 68.79 E-value: 1.64e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 69 VLWLVGSKDIVLFISVFSAMITYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFI 148
Cdd:MTH00226 126 VKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 149 GLNSGSFNVILWDKGDMCDSYGA----FLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCG 224
Cdd:MTH00226 206 YNIHGTTDYLTLASCSHVVSEQTqkwiFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSW 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 225 WLLIDYIYYFSTFLLCYSVVYLVAAVF----ECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLF 300
Cdd:MTH00226 286 PILPLGAQNLAPAVIAMGIVGIVYGSFatcrQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLF 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 301 MVIWFGYEISGSRnwgiLVKIFGGGLIMHFIMGFVF----LNVCGFPPALQFFGELWLVINYITLGDIISLLLVSIYIFS 376
Cdd:MTH00226 366 ILVTILYDRHHTR----LIKYYRGLSITMPIWGTIMivtsLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILS 441
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
168-385 |
2.63e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 68.46 E-value: 2.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 168 SYGAFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRL------CGWLLIDYIYYFSTFLL-- 239
Cdd:PRK12667 222 LGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIil 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 240 --CYSVVYLVAAVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSRNWGI 317
Cdd:PRK12667 302 gaVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDE 381
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 12249147 318 LVKIFGGGLIMHFIMGFVFLNVCGFPPALQFFGELWLVINYITLGDIISLLLVSIyifsGSIIGFIIY 385
Cdd:PRK12667 382 LAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLI----ASAISLVGY 445
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-303 |
5.59e-11 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 64.34 E-value: 5.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 53 DTLSCLMIFLTSIIW----LVLWLVGSKDiVLFISVFSAM-----ITYVVSNSLVFWFFYELSIISALYMLIVGSPYPER 123
Cdd:PRK02546 86 DGLSMPLILLTGFITtlavLAAWPVTFKP-KLFYFLMLAMyggqiAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQ 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 124 YISSwYFGGYILLSSVPLLLGICFIGLNSG--SFNVILWDKGDMCDS-----YGAFLliiIMFLTKIPVFPFHGWLPLVH 196
Cdd:PRK02546 165 YAAT-KFILYTAGSSLFILLAALAMAFYGDtpTFDMTALAAKDFGLGfqllcYAGLL---IAYGVKLPIVPLHTWLPDAH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 197 AEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSVVYLVAAVF----ECDSKRWLAYLSLSH---ILI 269
Cdd:PRK02546 241 GEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALtsfaQRNLKRKIAYSSISHmgfVLI 320
|
250 260 270
....*....|....*....|....*....|....
gi 12249147 270 GVCILLTSTYCGDYLAFIyclGHGLSVALLFMVI 303
Cdd:PRK02546 321 GIGSFTDLGTSGAMLQMI---SHGLIGASLFFLV 351
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
52-300 |
1.47e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 62.81 E-value: 1.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 52 IDTLSCLMIFLTS-IIWLVLWLVG-----SKDIVLFISVFSAMIT--YVVSNSLVFWFFYELSIISaLYMLIVGSPYPER 123
Cdd:PRK07363 77 VDGLSLPLLVLNSlLTWIAIYSIGenterPRLYYSLILLINGGIAgaLLAQNLLLFFLFYELELIP-FYLLIAIWGGEKR 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 124 YISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVILWDKGDMCDSYGAFLL----IIIMFLTKIPVFPFHGWLPLVHAEA 199
Cdd:PRK07363 156 GYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLIlltgLLLGFGIKIPLVPLHTWLPDAYTEA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 200 SSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCY---SVVY-LVAAVFECDSKRWLAYLSLSHILIGVCILL 275
Cdd:PRK07363 236 SPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIgtiSVIYgALSAIAQKDIKRMVAYSSIGHMGYILVAAA 315
|
250 260
....*....|....*....|....*
gi 12249147 276 TSTYCGDYLAFIYCLGHGLSVALLF 300
Cdd:PRK07363 316 AGTQLSLLGAVAQMISHGLILALLF 340
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
97-313 |
1.70e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 59.58 E-value: 1.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 97 LVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSG--SFNVILWDKGDMCDSYGAFLL 174
Cdd:MTH00127 117 IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGtlSMLTLQYSQPLQLSSWADKLW 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 175 I---IIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVR---LCGWLLIDYIYYFSTFLLCYSVVYLVA 248
Cdd:MTH00127 197 WagcLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRmmvMLDPLTKELSYPFIILALWGIIMTGSI 276
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 12249147 249 AVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSR 313
Cdd:MTH00127 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSR 341
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
84-359 |
2.02e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 59.36 E-value: 2.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 84 VFSAMITYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVILWDKG 163
Cdd:PRK08667 121 ILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGAS 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 164 DMCDSYgAFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSV 243
Cdd:PRK08667 201 AGILSL-VFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSI 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 244 VYLVAAVF---ECDSKRWLAYLSLSH---ILIGVCI-LLTSTYCGDYLAFI-------YCLGHGLSVALLFMVIWFGYEI 309
Cdd:PRK08667 280 SALLGVIYalkEHDLKGLLAYSSIENigiILMGIGLyVIFGVYGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHA 359
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 12249147 310 SGSRNwgilVKIFGGGLIMHFIMGFVFL----NVCGFPPALQFFGELWLVINYI 359
Cdd:PRK08667 360 TGTRN----IEKMGGLVKLMPYTSALFLvgavSIAALPPFNGFASELLLYESFF 409
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-300 |
1.04e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 56.88 E-value: 1.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 52 IDTLSCLMIFLTSIIW----LVLWLVgSKDIVLFISVFSAMIT-----YVVSNSLVFWFFYELSIISAlYMLIVGSPYPE 122
Cdd:CHL00011 82 IDGLSIGPILLTGFITtlatLAAWPV-TRNSRLFYFLMLAMYSgqiglFSSRDLLLFFIMWELELIPV-YLLLSMWGGKK 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 123 RYISSWYFGGYILLSSVPLL---LGICFIGLNSGSFNV-ILWDKgdmcdSYGAFLLII------IMFLTKIPVFPFHGWL 192
Cdd:CHL00011 160 RLYSATKFILYTAGGSIFLLigvLGMGLYGSNEPTLNFeTLANQ-----SYPVALEILfyigflIAYAVKLPIIPLHTWL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 193 PLVHAEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLLCYSVVYLVAAVFECDS----KRWLAYLSLSH-- 266
Cdd:CHL00011 235 PDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGqrnlKKRIAYSSVSHmg 314
|
250 260 270
....*....|....*....|....*....|....*
gi 12249147 267 -ILIGVCILltsTYCGDYLAFIYCLGHGLSVALLF 300
Cdd:CHL00011 315 fIIIGIGSI---TDTGLNGAILQIISHGFIGAALF 346
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
171-299 |
8.20e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 54.38 E-value: 8.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 171 AFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIY-YFSTFLLCYSVVYLVAA 249
Cdd:PRK08676 208 SFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAeQFSNVLIGLGIFSIAVA 287
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 12249147 250 VFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALL 299
Cdd:PRK08676 288 AFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
171-267 |
1.69e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 53.35 E-value: 1.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 171 AFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDYIYYFSTFLL----CYSVVYL 246
Cdd:PRK06521 212 VFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLalgaISAVLGV 291
|
90 100
....*....|....*....|.
gi 12249147 247 VAAVFECDSKRWLAYLSLSHI 267
Cdd:PRK06521 292 LYALAEHDLKRLLAYSTIENI 312
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
171-300 |
2.13e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.01 E-value: 2.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 171 AFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVR----LCGWLLIDYIyyfSTFLLCYSVVYL 246
Cdd:PRK06458 216 AFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyilIDAAIGSDFP---GRLLLIFGLLSV 292
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 12249147 247 VAAVF----ECDSKRWLAYLSLSHI-LIGVCILLTSTYcGDYLAFIYCLGHGLSVALLF 300
Cdd:PRK06458 293 LVAAFfllrQRDIKRLFAYSSIEHMgLIAFALGIGGPL-GIFAALLHMLNHSLTKSAIF 350
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
97-303 |
4.49e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 51.92 E-value: 4.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 97 LVFWFFYELSIISALYMLIVGSPYPERYiSSWYFGGYILlSSVPLLLGICFIGLNSGSFNVILWDKGDMCDSYGAFLLII 176
Cdd:PRK08668 121 LTLYIFWEIMTFSSFMMVPMGKKESRKA-SLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIV 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 177 IMFLT-----KIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGL-----VRLCGWLLIDYIYYFSTFLLCYSVVYL 246
Cdd:PRK08668 199 FLFLLafgvaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvlyVLPGTKLFSEFGTYRGVPLFNYILAWL 278
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 12249147 247 ---------VAAVFECDSKRWLAYLSLS---HILIGVCILLTSTYCGdylAFIYCLGHGLSVALLFMVI 303
Cdd:PRK08668 279 gnisiivgtLMAILQEDIKKLIAYSSVAnggYILVGLGLGTSLGFAG---GLFHVFNHALFKGLFFLIF 344
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
94-313 |
4.60e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 48.76 E-value: 4.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 94 SNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVILWD----KGDMCDSY 169
Cdd:MTH00068 113 TELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLElmspMQLMTYTN 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 170 GAFLLIIIM-FLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLcGWLLIDYIYYFSTFLLCYSVVYLVA 248
Cdd:MTH00068 193 KIWWLACLLaFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRI-SILLTPLSKELSYPFIILALWGVLM 271
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 12249147 249 AVFEC----DSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSR 313
Cdd:MTH00068 272 TSLIClrqtDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSR 340
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
121-313 |
1.17e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 47.19 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 121 PERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVI---LWDKgDMCDSYGAFLL---IIIMFLTKIPVFPFHGWLPL 194
Cdd:MTH00110 140 TERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLllqLWAQ-PLPNSWSNNLLwlaCMMAFMVKMPLYGLHLWLPK 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 195 VHAEASSPVSIILSGYIMKLGLVGLVRLCGWL--LIDYIYYfsTFLLcYSVVYLVAAVFEC----DSKRWLAYLSLSHI- 267
Cdd:MTH00110 219 AHVEAPIAGSMVLAAILLKLGGYGMMRITIILnpLTEFMAY--PFLM-LSLWGMIMTSSIClrqtDLKSLIAYSSVSHMa 295
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 12249147 268 LIGVCILLTST--YCGdylAFIYCLGHGLSVALLFMVIWFGYEISGSR 313
Cdd:MTH00110 296 LVIVAILIQTPwsFMG---ATALMIAHGLTSSMLFCLANSNYERIHSR 340
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
26-303 |
5.90e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.42 E-value: 5.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 26 YSSIWVSDSSMVMVGVKYYL-CDGLVIIDTLSCLMIFLTSIIWLVLWLVGSKDI----VLFISVFSAMITYVVSNSLVFW 100
Cdd:PRK12650 56 WSVTWIPDLLGNGVDVNLALrADALSLFFALLALVIGAVVFIYSARYLPRKKGNtsfyLLMTAFMAAMLLLVLADDVVVL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 101 FF-YELSIIsALYMLIVGS-PYPE----RYISSWYFGGYILLSSVplllGICFIGLNSGSFNVIL----WDKGDMCDSYG 170
Cdd:PRK12650 136 FVaWELVSL-ASFFLIARSgSGGEagsiRTLILTFFGGLTLLAAV----AIAATQTGTTSLSGILhsdvWAEKPGLTTVV 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 171 AFLLIIIMFlTKIPVFPFHGWLPLVHAeASSPVSIILSGYIM-KLGLVGLVRLCG---------WLLIdyiyyfsTFLLC 240
Cdd:PRK12650 211 AVLIAVAAF-TKSAQFPFHFWLPEAMA-AITPVSAFLHAAAVvKAGIYLLLRFSPvfhdvavwnWLLI-------IVGMI 281
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 12249147 241 YSVVYLVAAVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVI 303
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI 344
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-303 |
1.31e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 43.95 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 80 LFISVFSAMITYVVSNSLV-FWFFYELSIISAlYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNV- 157
Cdd:PRK12662 115 AFLLCLGGLLGILVSNDVFnIYVFLEISSISS-YVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMg 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 158 ----ILWDKGDMCDSYGAFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCG--------W 225
Cdd:PRK12662 194 dmflIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdvfkanfvF 273
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 12249147 226 LLIDYIYYFSTFLLCYSVVYLVAAVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVI 303
Cdd:PRK12662 274 TTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVS 351
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
88-313 |
1.75e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 43.65 E-value: 1.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 88 MITYVVSNSLVFWFFYELSIISALyMLIV--GSPyPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVILW--DKG 163
Cdd:MTH00124 107 ILAFSATELTLFYIMFEATLIPTL-ILITrwGNQ-PERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLqlTHP 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 164 DMCDSYGAFLL---IIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRlcgwllIDYIYYFSTFLLC 240
Cdd:MTH00124 185 TLTNSWTNLLLwlaCLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIR------ITLLLPPLSNTLH 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 241 YSVVYL-----VAAVFEC----DSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISG 311
Cdd:MTH00124 259 YPFLTLalwgaLMTSLIClrqtDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTH 338
|
..
gi 12249147 312 SR 313
Cdd:MTH00124 339 SR 340
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-261 |
1.98e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 43.73 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 136 LSSVPLLLGICFIGLNSGSFNVILWDKGDMcdsyGAFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLG 215
Cdd:PRK12668 154 LGGVLLLAGILLHYAETGSFAFGAIAGLGG----TAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTA 229
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 12249147 216 LVGLVRL-CGWLLIDYIyyfSTFLLCYSVVYlvaAVFECDSKRWLAY 261
Cdd:PRK12668 230 VYALARAfPGTELLIYI---GAAMAVYGVFF---ALLENDLRRLLSY 270
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-302 |
4.16e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 42.60 E-value: 4.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 80 LFISVF-SAMITYVVSNSLVFWF-FYELSIISAlYMLI---VGSPYPERYISSWYF--GGYILLssvpLLLGICFIGLNS 152
Cdd:PRK12647 99 SYILLFmASMLGLVLSDNLITLFvFWELTSITS-FLLIgfnHEREAARRAALQALLvtGGGGLA----LLAGLILLGNVT 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 153 GSFNV-ILWDKGDMCDSYGAFLLIIIMFL----TKIPVFPFHGWLPLVhAEASSPVSIIL-SGYIMKLGLVGLVRLCGWL 226
Cdd:PRK12647 174 GTYSLsELLASGDVIREHPLYLAILLLVLggafTKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVL 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 227 LIDYIYyfSTFLLCYSVVYLVA----AVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMV 302
Cdd:PRK12647 253 GGTPLW--QTILPLFGGLTMLTgallAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMV 330
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
185-222 |
9.76e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 41.35 E-value: 9.76e-04
10 20 30
....*....|....*....|....*....|....*...
gi 12249147 185 VFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRL 222
Cdd:PRK08042 196 IIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTL 233
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
87-266 |
2.55e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 40.17 E-value: 2.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 87 AMITYVVSNSLVF-WFFYELSIISAlYMLIvgspyperyiSSWY-----------------FGGYILLSSVpLLLG-ICf 147
Cdd:PRK12648 119 AMLGIVLSGNLILlVVFWELTSLSS-FLLI----------GYWHhradarrgarmaltvtgAGGLALLAGV-LLLGhIV- 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 148 iglnsGSFN--VILwDKGDMCDSYGAFLLIIIMFL----TKIPVFPFHGWLPlvHAEAS-SPVSIIL-SGYIMKLGLVGL 219
Cdd:PRK12648 186 -----GSYDldVVL-AAGDLIRAHPLYPPALVLILlgafTKSAQFPFHFWLP--HAMAApTPVSAYLhSATMVKAGVFLL 257
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 12249147 220 VRLcgWLLID----YIYYFSTFLLCYSVVYLVAAVFECDSKRWLAYLSLSH 266
Cdd:PRK12648 258 ARL--WPVLAgteeWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISH 306
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
172-355 |
3.30e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 39.57 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 172 FLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCGWLLIDyiYYFSTFLLCYSVVYLV---- 247
Cdd:PRK12665 212 FAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPG--GGLDTLLMVVALLTMVvgil 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 248 AAVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGS---RNWGILVKIFGg 324
Cdd:PRK12665 290 GAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSsslRRLGGLAKASP- 368
|
170 180 190
....*....|....*....|....*....|....*
gi 12249147 325 glimhfIMGFVF----LNVCGFPPALQFFGELWLV 355
Cdd:PRK12665 369 ------LLAVLFfvpaLNLGGIPPFSGFIGKVALL 397
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
47-343 |
5.95e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.97 E-value: 5.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 47 DGLVIIDTLSCLMIFLTSIIWLVLWLVGSKD------IVLFISVFSAMITYVVSNSLVFWFFYELSIISALYMlivgspy 120
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRKDnlprfyFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLL------- 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 121 peryISSWYFGG-----------YILLSSVPLLLGICFIGLNSGSFNVI-LWDKGDMCDSYGAFLLIIIMFL----TKIP 184
Cdd:PRK12646 150 ----ISYWYNNGdsqfgaiqsfmITVFGGLALLVGFIMLYIMTGTNNITeILGQADHIKNHGLFIPMIFMFLlgafTKSA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 185 VFPFHGWLPLVHAeASSPVSIIL-SGYIMKLGLVGLVRLCGWLLID--YIYYFSTFLLCYSVVYLVAAVFECDSKRWLAY 261
Cdd:PRK12646 226 QFPFHIWLPRAMA-APTPVSAYLhSATMVKAGIFLLFRFTPLLGLSnmYIYIVTFVGLITMLFGSITALKQWDLKGILAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 262 LSLSHI-----LIGVCILLTSTYCGD---------YLAFIYCLGHGLSVALLFMVIWFGYEISGSRNWGILVKIFGGGLI 327
Cdd:PRK12646 305 STISQLgmimaMVGIGGGYAQHQQDAiasiyvfvlFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPK 384
|
330
....*....|....*.
gi 12249147 328 MHFIMGFVFLNVCGFP 343
Cdd:PRK12646 385 MNLVMTIAALSMAGVP 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
171-313 |
8.25e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 38.21 E-value: 8.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12249147 171 AFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLCgwLLIDYIYYFSTFLLCYSVVYLVAAV 250
Cdd:PRK08377 208 GLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARIL--YLMQNANGWSSVLKLVIIMATLTVF 285
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 12249147 251 F-------ECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWF-GYEISGSR 313
Cdd:PRK08377 286 FaelsalrQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYvGITLGGTE 356
|
|
| |
