NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|6321629|ref|NP_011707|]
View 

histidine permease [Saccharomyces cerevisiae S288C]

Protein Classification

amino acid permease( domain architecture ID 11489958)

amino acid permease belonging to the APC (amino acid/polyamine/organocation) family, is an integral membrane protein that facilitates the transport of amino acids

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
88-567 0e+00

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


:

Pssm-ID: 273334  Cd Length: 478  Bit Score: 684.01  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629     88 KDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVV-GGFNVYSMRFIEPS 166
Cdd:TIGR00913   2 KSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVsGSFATYASRFVDPA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    167 FAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSIIGFTIL 246
Cdd:TIGR00913  82 FGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIIL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    247 GIVLSCGGGPHGGYIGGKYWHDPGAFVGHSSGTQFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWLI 326
Cdd:TIGR00913 162 SIILNCGGGPNHGYIGFRYWHDPGAFAGGTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRI 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    327 TASYVTILTLIGCLVPSNDPRLLNGSSSVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAMAH 406
Cdd:TIGR00913 242 LVFYILTLFLIGFLVPYNDPRLLSSSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAH 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    407 IGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQERSLD 486
Cdd:TIGR00913 322 QGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRSLD 401
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    487 ELPFISQTGVKGSWYGFIVLFLVLIASFWTSLFPLggsGASAESFFEGYLSFPILIVCYVGHKLYTRNWtLMVKLEDMDL 566
Cdd:TIGR00913 402 ELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPV---KFSAKSFFEAYLSLPIFIALYIGHKVYKRDK-LIIKLDDIDL 477

                  .
gi 6321629    567 D 567
Cdd:TIGR00913 478 D 478
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
88-567 0e+00

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 684.01  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629     88 KDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVV-GGFNVYSMRFIEPS 166
Cdd:TIGR00913   2 KSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVsGSFATYASRFVDPA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    167 FAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSIIGFTIL 246
Cdd:TIGR00913  82 FGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIIL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    247 GIVLSCGGGPHGGYIGGKYWHDPGAFVGHSSGTQFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWLI 326
Cdd:TIGR00913 162 SIILNCGGGPNHGYIGFRYWHDPGAFAGGTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRI 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    327 TASYVTILTLIGCLVPSNDPRLLNGSSSVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAMAH 406
Cdd:TIGR00913 242 LVFYILTLFLIGFLVPYNDPRLLSSSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAH 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    407 IGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQERSLD 486
Cdd:TIGR00913 322 QGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRSLD 401
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    487 ELPFISQTGVKGSWYGFIVLFLVLIASFWTSLFPLggsGASAESFFEGYLSFPILIVCYVGHKLYTRNWtLMVKLEDMDL 566
Cdd:TIGR00913 402 ELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPV---KFSAKSFFEAYLSLPIFIALYIGHKVYKRDK-LIIKLDDIDL 477

                  .
gi 6321629    567 D 567
Cdd:TIGR00913 478 D 478
AA_permease pfam00324
Amino acid permease;
94-559 3.26e-132

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 395.15  E-value: 3.26e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629     94 HLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIEPSFAFAVNL 173
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    174 NYLAQWLVLLPLELVAASITIKYWN---DKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSIIGFTILGIVL 250
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWElvpDIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    251 SCGGGPHGGYIGgKYWHDPGAFVGHSSGTQfKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWLITASY 330
Cdd:pfam00324 161 LSGGNPNDGAIF-RYLGDNGGKNNFPPGFG-KGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFY 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    331 VTILTLIGCLVPSNDPRLLNGSSSvdaASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAMAHIGNL 410
Cdd:pfam00324 239 ILSLLAIGLLVPWNDPGLLNDSAS---AASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLA 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    411 PKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQERSLDELPF 490
Cdd:pfam00324 316 PKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPF 395
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6321629    491 ISQTGVKGSWYGFIVLFLVLIASFWTSLFPLGGSGA--SAESFFEGYLSFPILIVCYVGHKLYTRNWTLMV 559
Cdd:pfam00324 396 KAPLGPLGVILGLAAIIIILIIQFLYAFLPVPGGPKnwGAGSFAAAYLIVLLFLIILIGVKLHVKNWKPQL 466
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
77-568 4.38e-130

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 389.53  E-value: 4.38e-130
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   77 EQEDINNTNLSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFN 156
Cdd:COG0833   1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQ 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  157 VYSMRFIEPSFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIK 236
Cdd:COG0833  81 TYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  237 ILSIIGFTILGIvLSCGGGPHGGYIGGKYWHDPGA-FVGHssgtqFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETI 315
Cdd:COG0833 161 VITVIAFIIVGL-LMIFGIIGGHAPGFSNFTTGDGpFPGG-----FLAILGVMMIVGFSFQGTELIGIAAGESENPEKTI 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  316 PKAAKRTFWLITASYVTILTLIGCLVPSNDPRLlngsssvdaASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVY 395
Cdd:COG0833 235 PKAIRQVFWRILLFYILAIFVIAALIPYTDAGV---------AESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLY 305
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  396 ACSRCMVAMAHIGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFR 475
Cdd:COG0833 306 ASTRMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFR 385
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  476 QAMKVQERSLDELPFisqtgvKGSWYGFIVLFlvliaSFWTSLFPLGGSGASAESFFEGYLSFPILIVCYVGHKLYTRnw 555
Cdd:COG0833 386 RAYVAQGGDLEDLKY------KAPLFPFGPIF-----AFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLKKK-- 452
                       490
                ....*....|...
gi 6321629  556 TLMVKLEDMDLDT 568
Cdd:COG0833 453 TKLVPLEEMDLSP 465
PRK10836 PRK10836
lysine transporter; Provisional
86-572 1.73e-83

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 269.77  E-value: 1.73e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    86 LSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIEP 165
Cdd:PRK10836  13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEE 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   166 SFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSIIGFTI 245
Cdd:PRK10836  93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFII 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   246 LGIVLSCGGGPHGGYIGGKYWHDPGA-FVGhssgtQFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFW 324
Cdd:PRK10836 173 VGVLMIIGIFKGAEPAGWSNWTIGDApFAG-----GFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFW 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   325 LITASYVTILTLIGCLVPSNDPRLLNGSSSvDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAM 404
Cdd:PRK10836 248 RILLFYVFAILIISLIIPYTDPSLLRNDVK-DISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTL 326
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   405 AHIGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQERS 484
Cdd:PRK10836 327 ACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHD 406
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   485 LDELPFISQTGVKGSWYGFIVLFLVLIA----SFWTSLFPLGGSGASaesffegYLSFPILIVCYVGHKLYTRnwTLMVK 560
Cdd:PRK10836 407 LNDLPYRSGFFPLGPIFAFVLCLIITLGqnyeAFLKDTIDWGGVAAT-------YIGIPLFLIIWFGYKLIKG--THFVR 477
                        490
                 ....*....|..
gi 6321629   561 LEDMDLDTGRKQ 572
Cdd:PRK10836 478 YSEMKFPQNDKK 489
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
88-567 0e+00

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 684.01  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629     88 KDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVV-GGFNVYSMRFIEPS 166
Cdd:TIGR00913   2 KSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVsGSFATYASRFVDPA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    167 FAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSIIGFTIL 246
Cdd:TIGR00913  82 FGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIIL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    247 GIVLSCGGGPHGGYIGGKYWHDPGAFVGHSSGTQFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWLI 326
Cdd:TIGR00913 162 SIILNCGGGPNHGYIGFRYWHDPGAFAGGTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRI 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    327 TASYVTILTLIGCLVPSNDPRLLNGSSSVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAMAH 406
Cdd:TIGR00913 242 LVFYILTLFLIGFLVPYNDPRLLSSSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAH 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    407 IGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQERSLD 486
Cdd:TIGR00913 322 QGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRSLD 401
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    487 ELPFISQTGVKGSWYGFIVLFLVLIASFWTSLFPLggsGASAESFFEGYLSFPILIVCYVGHKLYTRNWtLMVKLEDMDL 566
Cdd:TIGR00913 402 ELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPV---KFSAKSFFEAYLSLPIFIALYIGHKVYKRDK-LIIKLDDIDL 477

                  .
gi 6321629    567 D 567
Cdd:TIGR00913 478 D 478
AA_permease pfam00324
Amino acid permease;
94-559 3.26e-132

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 395.15  E-value: 3.26e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629     94 HLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIEPSFAFAVNL 173
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    174 NYLAQWLVLLPLELVAASITIKYWN---DKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSIIGFTILGIVL 250
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWElvpDIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    251 SCGGGPHGGYIGgKYWHDPGAFVGHSSGTQfKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWLITASY 330
Cdd:pfam00324 161 LSGGNPNDGAIF-RYLGDNGGKNNFPPGFG-KGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFY 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    331 VTILTLIGCLVPSNDPRLLNGSSSvdaASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAMAHIGNL 410
Cdd:pfam00324 239 ILSLLAIGLLVPWNDPGLLNDSAS---AASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLA 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    411 PKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQERSLDELPF 490
Cdd:pfam00324 316 PKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPF 395
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6321629    491 ISQTGVKGSWYGFIVLFLVLIASFWTSLFPLGGSGA--SAESFFEGYLSFPILIVCYVGHKLYTRNWTLMV 559
Cdd:pfam00324 396 KAPLGPLGVILGLAAIIIILIIQFLYAFLPVPGGPKnwGAGSFAAAYLIVLLFLIILIGVKLHVKNWKPQL 466
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
77-568 4.38e-130

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 389.53  E-value: 4.38e-130
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   77 EQEDINNTNLSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFN 156
Cdd:COG0833   1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQ 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  157 VYSMRFIEPSFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIK 236
Cdd:COG0833  81 TYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  237 ILSIIGFTILGIvLSCGGGPHGGYIGGKYWHDPGA-FVGHssgtqFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETI 315
Cdd:COG0833 161 VITVIAFIIVGL-LMIFGIIGGHAPGFSNFTTGDGpFPGG-----FLAILGVMMIVGFSFQGTELIGIAAGESENPEKTI 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  316 PKAAKRTFWLITASYVTILTLIGCLVPSNDPRLlngsssvdaASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVY 395
Cdd:COG0833 235 PKAIRQVFWRILLFYILAIFVIAALIPYTDAGV---------AESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLY 305
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  396 ACSRCMVAMAHIGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFR 475
Cdd:COG0833 306 ASTRMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFR 385
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  476 QAMKVQERSLDELPFisqtgvKGSWYGFIVLFlvliaSFWTSLFPLGGSGASAESFFEGYLSFPILIVCYVGHKLYTRnw 555
Cdd:COG0833 386 RAYVAQGGDLEDLKY------KAPLFPFGPIF-----AFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLKKK-- 452
                       490
                ....*....|...
gi 6321629  556 TLMVKLEDMDLDT 568
Cdd:COG0833 453 TKLVPLEEMDLSP 465
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
82-516 1.40e-92

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 292.41  E-value: 1.40e-92
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   82 NNTNLSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPaSLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMR 161
Cdd:COG1113   9 EEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGP-AVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  162 FIEPSFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSII 241
Cdd:COG1113  88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  242 GFTILGIVLSCGGgphggyiggkyWHDPGafvGHSSGTQ------------FKGLCSVFVTAAFSYSGIEMTAVSAAESK 309
Cdd:COG1113 168 AFIVVGLLLIFFG-----------FGLPG---GPPAGLSnlwdhggffpngIGGVLAALQIVVFAFGGIELVGIAAAEAK 233
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  310 NPRETIPKAAKRTFWLITASYVTILTLIGCLVPSNdprllngssSVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSV 389
Cdd:COG1113 234 DPEKTIPKAINSVIWRILLFYVGSLFVILALVPWN---------QIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSS 304
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  390 ANSAVYACSRCMVAMAHIGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINL 469
Cdd:COG1113 305 LNSGLYSTSRMLYSLAERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILV 384
                       410       420       430       440
                ....*....|....*....|....*....|....*....|....*..
gi 6321629  470 SHIRFRQAMKvqERSLDELPFISQTGVKGSWYGFIVLFLVLIASFWT 516
Cdd:COG1113 385 SQLKFRRRLP--REGAAALKFKMPGFPYTSYLTLAFLAAVLVLMAFD 429
PRK10836 PRK10836
lysine transporter; Provisional
86-572 1.73e-83

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 269.77  E-value: 1.73e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    86 LSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIEP 165
Cdd:PRK10836  13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEE 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   166 SFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSIIGFTI 245
Cdd:PRK10836  93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFII 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   246 LGIVLSCGGGPHGGYIGGKYWHDPGA-FVGhssgtQFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFW 324
Cdd:PRK10836 173 VGVLMIIGIFKGAEPAGWSNWTIGDApFAG-----GFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFW 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   325 LITASYVTILTLIGCLVPSNDPRLLNGSSSvDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAM 404
Cdd:PRK10836 248 RILLFYVFAILIISLIIPYTDPSLLRNDVK-DISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTL 326
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   405 AHIGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQERS 484
Cdd:PRK10836 327 ACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHD 406
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   485 LDELPFISQTGVKGSWYGFIVLFLVLIA----SFWTSLFPLGGSGASaesffegYLSFPILIVCYVGHKLYTRnwTLMVK 560
Cdd:PRK10836 407 LNDLPYRSGFFPLGPIFAFVLCLIITLGqnyeAFLKDTIDWGGVAAT-------YIGIPLFLIIWFGYKLIKG--THFVR 477
                        490
                 ....*....|..
gi 6321629   561 LEDMDLDTGRKQ 572
Cdd:PRK10836 478 YSEMKFPQNDKK 489
PRK10249 PRK10249
phenylalanine transporter; Provisional
86-483 4.46e-59

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 204.45  E-value: 4.46e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    86 LSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLvIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIEP 165
Cdd:PRK10249  19 LHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVL-LGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGP 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   166 SFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSIIGFTI 245
Cdd:PRK10249  98 FAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIG 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   246 LGIVLSCGGGPHGGYIGGKYWHDPGAFvghssGTQFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWL 325
Cdd:PRK10249 178 FGLWLLFSGHGGEKASIDNLWRYGGFF-----ATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYR 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   326 ITASYVTILTLIGCLVPSNDprllngsssVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAMA 405
Cdd:PRK10249 253 ILLFYIGSLVVLLALYPWVE---------VKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLS 323
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6321629   406 HIGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQER 483
Cdd:PRK10249 324 VQGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGR 401
PRK10238 PRK10238
aromatic amino acid transporter AroP;
86-481 6.76e-58

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 200.95  E-value: 6.76e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    86 LSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPAsLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIEP 165
Cdd:PRK10238  10 LKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPG-IILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGS 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   166 SFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSIIGFTI 245
Cdd:PRK10238  89 FAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMII 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   246 LGIVLSCGGGPHGGYIGGKYWhDPGAFVGHSsgtqFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWL 325
Cdd:PRK10238 169 FGGWLLFSGNGGPQATVSNLW-DQGGFLPHG----FTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYR 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   326 ITASYVTILTLIGCLVPSndprllngsSSVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAMA 405
Cdd:PRK10238 244 ILIFYIGSLAVLLSLMPW---------TRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLA 314
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6321629   406 HIGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQ 481
Cdd:PRK10238 315 QQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQ 390
PRK11387 PRK11387
S-methylmethionine permease;
77-553 6.64e-57

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 198.92  E-value: 6.64e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    77 EQEDINNTNLSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFN 156
Cdd:PRK11387   3 EPTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAFH 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   157 VYSMRFIEPSFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIK 236
Cdd:PRK11387  83 VYAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   237 ILSIIGFTILGIVLSCGGGPHGGYIGGKYWHDPGAFVGHSSGTQfkGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIP 316
Cdd:PRK11387 163 VVTILAFIVLGGAAIFGFIPMQDGSPAPGLRNLTAEGWFPHGGL--PILMTMVAVNFAFSGTELIGIAAGETENPAKVIP 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   317 KAAKRTFWLITASYVTILTLIGCLVPSNDPRLlngsssvdaASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYA 396
Cdd:PRK11387 241 VAIRTTIARLVIFFVGTVLVLAALIPMQQAGV---------EKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYA 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   397 CSRCMVAMAHIGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQ 476
Cdd:PRK11387 312 SGRMLWSLSNEGTLPACFARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHFMFRR 391
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6321629   477 AMKVQERSLDELPFisqtgvKGSWYGfivlfLVLIASFWTSLFPLGGSGASAESFFEGYLSFPILIVCYVGHKLYTR 553
Cdd:PRK11387 392 RHLRDGKALSELAY------RAPWYP-----LTPILGFVLCLLACVGLAFDPSQRIALWCGIPFVALCYGAYYLTQR 457
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
82-518 9.93e-44

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 161.99  E-value: 9.93e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   82 NNTNLSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIdWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMR 161
Cdd:COG0531   5 ESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILA-WLIAGLLALLVALSYAELASAFPRAGGAYTYARR 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  162 FIEPSFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSII 241
Cdd:COG0531  84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  242 GFTILGIVlscgggphggyiggkyWHDPGAFVGHSSGTQ-FKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAK 320
Cdd:COG0531 164 LFIVVGLF----------------AFDPANFTPFLPAGGgLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAII 227
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  321 RTFWLITASYVTILTLIGCLVPSNDprllngsssVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRC 400
Cdd:COG0531 228 LSLLIVGVLYILVSLALTGVVPYDE---------LAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRL 298
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629  401 MVAMAHIGNLPKFLNRV-DKRGRPMNAILLTLFFGLLsFVAASdkqAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMK 479
Cdd:COG0531 299 LYAMARDGLLPKVFAKVhPRFGTPVNAILLTGVIALL-LLLLG---AASFTALASLASVGVLLAYLLVALAVIVLRRRRP 374
                       410       420       430
                ....*....|....*....|....*....|....*....
gi 6321629  480 VQERsldelPFISQTGVkGSWYGFIVLFLVLIASFWTSL 518
Cdd:COG0531 375 DLPR-----PFRVPLPL-IPILGILLCLFLLYLLGPGAL 407
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
76-512 2.99e-39

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 150.27  E-value: 2.99e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    76 TEQEDINNTNLSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPaSLVIDWVIISTCLFTVINSLGELSAAFPVVGGF 155
Cdd:PRK11049   8 ADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGP-SIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSF 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   156 NVYSMRFIEPSFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKInsDAWVAIFYATIAL--ANMLDVKSFGETEFVLS 233
Cdd:PRK11049  87 SDFASDLLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDL--SDWVASLAVVLLLlsLNLATVKMFGEMEFWFA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   234 MIKILSIIGFTILGIVLSCGGGPH---GGYIGGKYWHDPGAFVGHSSGTqFKGlcsvFVTAAFSYSGIEMTAVSAAESKN 310
Cdd:PRK11049 165 MIKIVAIVALIVVGLVMVAMHFQSptgVEASFAHLWNDGGMFPKGLSGF-FAG----FQIAVFAFVGIELVGTTAAETKD 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   311 PRETIPKAAKRTFWLITASYVTILTLIGCLVPsndprllngSSSVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVA 390
Cdd:PRK11049 240 PEKSLPRAINSIPIRIIMFYVFALIVIMSVTP---------WSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSA 310
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   391 NSAVYACSRCMVAMAHIGNLPKFLNRVDKRGRPMNAILLT---LFFGLLSFVAASDkQAEVFTWLSALSGLSTIFCWMAI 467
Cdd:PRK11049 311 NSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFScicLLGGVVLLYVNPS-VIGAFTLVTTVSAILFMFVWTII 389
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 6321629   468 NLSHIRFR-QAMKVQERSLDELPFisqtGVKGSW--YGFIVLFLVLIA 512
Cdd:PRK11049 390 LCSYLVYRkQRPHLHEKSIYKMPL----GKLMCWvcMAFFAFVLVLLT 433
PRK10746 PRK10746
putative transport protein YifK; Provisional
82-479 8.56e-39

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 148.81  E-value: 8.56e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    82 NNTNLSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPaSLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMR 161
Cdd:PRK10746   4 NKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGP-SVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   162 FIEPSFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSII 241
Cdd:PRK10746  83 YMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTII 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   242 GFTI--LGIVLSCGGGPHGGYIGGKYWHDPGAFVGHSSGTQFkGLCSVFVtaafSYSGIEMTAVSAAESKNPRETIPKAA 319
Cdd:PRK10746 163 VMIVigLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLT-ALCIVVA----SYQGVELIGITAGEAKNPQVTLRSAV 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   320 KRTFWLITASYVTILTLIGCLVPSNDprllngsssVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSR 399
Cdd:PRK10746 238 GKVLWRILIFYVGAIFVIVTIFPWNE---------IGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGR 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   400 CMVAMAHIGNLPKFLNRVDKRGRPMNAILLTLFFGL----LSFVAASDKQaeVFTWLSALSGLSTIFCWMAINLSHIRFR 475
Cdd:PRK10746 309 MLYALAKNRQLPAAMAKVSRHGVPVAGVAVSILILLvgscLNYIIPNPQR--VFVYVYSASVLPGMVPWFVILISQLRFR 386

                 ....
gi 6321629   476 QAMK 479
Cdd:PRK10746 387 RAHK 390
proY PRK10580
putative proline-specific permease; Provisional
82-514 1.47e-38

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 148.04  E-value: 1.47e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    82 NNTNLSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPaSLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMR 161
Cdd:PRK10580   3 SKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQE 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   162 FIEPSFAFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSII 241
Cdd:PRK10580  82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   242 GFTI--LGIVLSCGGGPHGGYIGGKYWHDpGAFVGHSsgtqFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAA 319
Cdd:PRK10580 162 IMIVagIGIIIWGIGNGGQPTGIHNLWSN-GGFFSNG----WLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAI 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   320 KRTFWLITASYVTILTLIGCLVPSNDprllngsssVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSR 399
Cdd:PRK10580 237 NSVPMRILVFYVGTLFVIMSIYPWNQ---------VGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGR 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   400 CMVAMAHIGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMK 479
Cdd:PRK10580 308 MLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLP 387
                        410       420       430
                 ....*....|....*....|....*....|....*..
gi 6321629   480 VQErsLDELPFISQTGVKGSWYG--FIVLFLVLIASF 514
Cdd:PRK10580 388 PEE--VKALKFKVPGGVATTIGGliFLVFIIGLIGYH 422
PRK15049 PRK15049
L-asparagine permease;
88-511 1.57e-38

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 148.61  E-value: 1.57e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    88 KDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPAsLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIEPSF 167
Cdd:PRK15049  28 KAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPA-LALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKA 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   168 AFAVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWVAIFYA--TIALANMLDVKSFGETEFVLSMIKILSIIGFTI 245
Cdd:PRK15049 107 AYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAAltIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLV 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   246 LG-IVLSCGGGPHGGYIGGKYWHDPGAFVGHssgtqfkGLCSVFVT---AAFSYSGIEMTAVSAAESKNPRETIPKAAKR 321
Cdd:PRK15049 187 VGtVFLGSGQPLDGNTTGFHLITDNGGFFPH-------GLLPALVLiqgVVFAFASIEMVGTAAGECKDPQTMVPKAINS 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   322 TFWLITASYVTILTLIGCLVPSNdprllngssSVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCM 401
Cdd:PRK15049 260 VIWRIGLFYVGSVVLLVMLLPWS---------AYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRIL 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   402 VAMAHIGNLPKFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKvq 481
Cdd:PRK15049 331 RSMAMGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIK-- 408
                        410       420       430
                 ....*....|....*....|....*....|
gi 6321629   482 ERSLDELPFISQTGVKGSWYGFIVLFLVLI 511
Cdd:PRK15049 409 EGKAADVSFKLPGAPFTSWLTLLFLLSVLV 438
PRK10197 PRK10197
GABA permease;
98-481 2.16e-35

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 138.60  E-value: 2.16e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    98 LAVGGAIGTGLYVNTGAALSTGGPASLvIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIEPSFAFAVNLNYLA 177
Cdd:PRK10197   2 LSIAGVIGASLFVGSSVAIAEAGPAVL-LAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   178 QWLVLLPLELVAASITIKYWNDKInsDAWVAIFYATIAL--ANMLDVKSFGETEFVLSMIKILSIIGFTILGIV-LSCGG 254
Cdd:PRK10197  81 FWVLVIPLEANIAAMILHSWVPGI--PIWLFSLVITLALtgSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVaISGFY 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   255 GPHGGYIGGKYWhDPGAFVGHSsgtqFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWLITASYVTIL 334
Cdd:PRK10197 159 PYAEVSGISRLW-DSGGFMPNG----FGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSI 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   335 TLIGCLVPSNDPrllnGSSSVDAASSPLviaiENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAMAHIGNLPKFL 414
Cdd:PRK10197 234 FVVVALIPWNMP----GLKAVGSYRSVL----ELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVM 305
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6321629   415 NRVDKRGRPMNAILLTLFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQ 481
Cdd:PRK10197 306 GKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE 372
AA_permease_2 pfam13520
Amino acid permease;
90-515 2.16e-20

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 93.91  E-value: 2.16e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629     90 LSVRHLLTLAVGGAIGTGLYVNTGAAlsTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIEPSFAF 169
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVA--SGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    170 -AVNLNYLAQWLVLLPLELVAASITIKYWNDKINSDAWV-----AIFYATIALANMLDVKSFGETEFVLSMIKILSIIGF 243
Cdd:pfam13520  79 lAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTTWLtygiaIAILIIFAIINIRGVRESAKIQNILGILKLLLPLIL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    244 -TILGIVLSCGGGPHGGYIGGKYWHDPGafvghssgtqFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPreTIPKAAKRT 322
Cdd:pfam13520 159 iIILGLVTADGGGFNLLSGEWHTFFPDG----------WPGVFAGFLGVLWSFTGFESAANVSEEVKKR--NVPKAIFIG 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    323 FWLITASYVTILTLIGCLVPsndprlLNGSSSVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMV 402
Cdd:pfam13520 227 VIIVGVLYILVNIAFFGVVP------DDEIALSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLY 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    403 AMAHIGNLP--KFLNRVDKRGRPMNAILLTLFFGLLSFVAASDKQAeVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKV 480
Cdd:pfam13520 301 ALARDGVLPfsRFFAKVNKFGSPIRAIILTAILSLILLLLFLLSPA-AYNALLSLSAYGYLLSYLLPIIGLLILRKKRPD 379
                         410       420       430
                  ....*....|....*....|....*....|....*
gi 6321629    481 QERSLDELPFisqtgvkgSWYGFIVLFLVLIASFW 515
Cdd:pfam13520 380 LGRIPGRWPV--------AIFGILFSLFLIVALFF 406
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
84-469 2.26e-10

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 63.30  E-value: 2.26e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629     84 TNLSKDLSVRHLLTLAVGGAIGTGLYVNTGA-ALSTGGPAsLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRF 162
Cdd:TIGR00906  24 SKMKRCLTTWDLMALGIGSTIGAGIYVLTGEvARNDSGPA-IVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVT 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    163 IEPSFAFAVNLNylaqwlvlLPLE-LVAASITIKYWND------------------KINSD--AWVAIFYATIALANMLD 221
Cdd:TIGR00906 103 VGELWAFITGWN--------LILEyVIGTAAVARSWSAyfdellnkqigqfrrtyfKLNYDglAEYPDFFAVCLILLLAV 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    222 VKSFGeTEFVLSMIKILSIIGFTILGIVLSCGGGPHGGYI-GGKYWHDPGAFVGHSSGTQFKGLCSVFvtaaFSYSGIEM 300
Cdd:TIGR00906 175 LLSFG-VKESAWVNKIFTAINILVLLFVIIAGFTKADVANwSITEEKGAGGFMPYGFTGVLSGAATCF----FAFIGFDA 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    301 TAVSAAESKNPRETIPKAAKRTFWLITASYVTILTLIGCLVPSN--DPRllngsssvdaasSPLVIAIENGGIKGLPSLM 378
Cdd:TIGR00906 250 IATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYllDPD------------APFPVAFEYVGWDPAKYIV 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    379 NAIILIAVVSVANSAVYACSRCMVAMAHIGNLPKFLNRV-DKRGRPMNAillTLFFGLLSFVAAsdkqaeVFTWLSALSG 457
Cdd:TIGR00906 318 AVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQInSKTKTPINA---TVVSGAIAALMA------FLFDLKALVD 388
                         410
                  ....*....|..
gi 6321629    458 LSTIFCWMAINL 469
Cdd:TIGR00906 389 LLSIGTLLAYSL 400
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
86-433 2.56e-08

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 56.68  E-value: 2.56e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629     86 LSKDLSVRHLLTLAVG-GAIGTGLYVNTGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIE 164
Cdd:TIGR00907  10 LKREFSLWSIFGFAFSiSNSWTGISTTYNYGLSSGGAMSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAP 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    165 PSFAFAVN-----LNYLAQWLV-----LLPLELVAASITIKYWNDKINSDAW--VAIFYATIALANMLDVKSFGETEFVL 232
Cdd:TIGR00907  90 PRQMPFASwmtgwFNLAGQVAGtastdLSVAQLILGIVSLTTPGREYIPTRWhiFGIMIGIHLIHALINSLPTKWLPRIT 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    233 SMIKILSIIGFtiLGIVLSCGGGPHGGYIGGKYWHdpGAFVGHSSGTQFKGLCSVF--VTAAFSYSGIEMTAVSAAESKN 310
Cdd:TIGR00907 170 SSAAYWSLLGF--LTICITLLACKSPKFNDGKFVF--TNFNNSTGGWKPGGFAFLLglLNPAWSMTGYDGTAHMAEEIEN 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    311 PRETIPKAakrtfwLITASYVTILT----LIGCLVPSNDPRLLNGSssvdAASSPLVIAIENGGIKGLPSL-MNAIILIA 385
Cdd:TIGR00907 246 PEVVGPRA------IIGAVAIGIVTgfcfNIVLFFSMGDIDSLISS----TTGQPIAQIFYNALGNKAGAIfLLCLILVT 315
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 6321629    386 VVSVANSAVYACSRCMVAMAHIGNLP--KFLNRVDKR-GRPMNAILLTLFF 433
Cdd:TIGR00907 316 SFFCAITCMTANSRMIYAFSRDGGLPfsPLWSRVNPRtQVPLNAVWLSAVW 366
cadB PRK10435
cadaverine/lysine antiporter;
276-474 3.05e-05

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 46.67  E-value: 3.05e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   276 SSGTQFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWLITASYVTILTLIGCLVP------SNDPRLL 349
Cdd:PRK10435 181 SDTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQVISGMFPasvmaaSGAPFAI 260
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   350 NGSSSVDAASSPLVIAIEngGIKGLPSLMNAIILiavvsVANSAVYAcsrcmvamAHIGNLPKFLNRVDKRGRPMNAILL 429
Cdd:PRK10435 261 SASTILGNWAAPLVSAFT--AFACLTSLGSWMML-----VGQAGVRA--------ANDGNFPKVYGEVDKNGIPKKGLLL 325
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 6321629   430 T------LFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRF 474
Cdd:PRK10435 326 AavkmtaLMILITLMNSSGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRF 376
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
58-430 3.45e-05

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 46.66  E-value: 3.45e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629     58 NQTTNDITSSDRFRRNEDTEQEDINNTNLSKDLSVRHLLTLAVGGAIGTGLYVN-TGAALSTGGPASLVIDWVIisTCLF 136
Cdd:TIGR00911  12 NATNYQFSSSGRKKSVSASTVDGGEAVALKKEITLLSGVGIIVGTIIGSGIFVSpKGVLKNAGSVGLALIMWAV--CGIF 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    137 TVINSL--GELSAAFPVVGGFNVY----------------SMRFIEPSFAFAVNLNYlAQWLvllpLELVAASITIKYWN 198
Cdd:TIGR00911  90 SIVGALvyAELGTTIPKSGGEYNYilevfgpllaflrlwiELLVIRPGSQAVNALNF-AIYI----LTPVFPDCEVPEWA 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    199 DKINsdAWVAIFYATiaLANMLDVKSFGETEFVLSMIKILSIIGFTILGIVLSCGGGPhggyiggkYWHDP-GAFVGhsS 277
Cdd:TIGR00911 165 IRLV--AVLCVLLLT--LVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGV--------ESLNPkNAFEG--T 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    278 GTQFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWLITASYVtiLTLIGCLVPSNDPRLLNGSS-SVD 356
Cdd:TIGR00911 231 ETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYV--LTNIAYFTVLSPEELLASLAvAVD 308
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6321629    357 AASSPLviaiengGIKGLpsLMNAIILIAVVSVANSAVYACSRCMVAMAHIGNLPKFLNRVD-KRGRPMNAILLT 430
Cdd:TIGR00911 309 FGERLL-------GVMSW--AMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHvKRLTPLPSLLIV 374
PRK10644 PRK10644
arginine/agmatine antiporter;
97-440 2.80e-04

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 43.63  E-value: 2.80e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    97 TLAVGGAI-GTGLYVNTGAALSTGGPAslVIDWVIistclfTVINSLG------ELSAAFPVVGGFNVYSMRFIEPSFAF 169
Cdd:PRK10644  16 TLMVAGNImGSGVFLLPANLASTGGIA--IYGWLV------TIIGALGlsmvyaKMSSLDPSPGGSYAYARRCFGPFLGY 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   170 AVNLNY-LAQWLVLLPLeLVAASITIKYW----NDKINSDAWVAIFYATIALANMLDVKSFGETEFVLSMIKILSIIGFT 244
Cdd:PRK10644  88 QTNVLYwLACWIGNIAM-VVIGVGYLSYFfpilKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   245 ILGIvlscgggphggyiggkYWHDPGAFVG--HSSGTQ-FKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKR 321
Cdd:PRK10644 167 VFGW----------------FWFRGETYMAawNVSGLGtFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIG 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   322 TFWLITASYVTILTLIGCLVPsNDPRLLNGSSSVDAASSPLviaienGGIKGlpslmNAIILIAVVSVANSA---VYACS 398
Cdd:PRK10644 231 GVLIAAVCYVLSSTAIMGMIP-NAALRVSASPFGDAARMAL------GDTAG-----AIVSFCAAAGCLGSLggwTLLAG 298
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 6321629   399 RCMVAMAHIGNLPKFLNRVDKRGRPMN-----AILLTLF------------FGLLSFVA 440
Cdd:PRK10644 299 QTAKAAADDGLFPPIFARVNKAGTPVAgllivGVLMTIFqlssispnaskeFGLVSSVS 357
frlA PRK11357
amino acid permease;
86-467 9.59e-04

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 42.15  E-value: 9.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629    86 LSKDLSVRHLLTLAVGGAIGTGLYVNTGA-ALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFNVYSMRFIE 164
Cdd:PRK11357   6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEvAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   165 PSFAFavnLNYLAQWLVLLPLELVAASITI-KYWNDKINSDAWVAIFYAT--IALANMLDVKSFGETEFVLSMIKILSII 241
Cdd:PRK11357  86 RPLAF---LSGWASFWANDAPSLSIMALAIvSNLGFLTPIDPLLGKFIAAglIIAFMLLHLRSVEGGAAFQTLITIAKII 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   242 GFTILgIVLSCgggphggyiggkYWHDPGAFVGH-----SSGTQFKGLCSVFVTAAFSYSGIEMTAVSAAESKNPRETIP 316
Cdd:PRK11357 163 PFTIV-IGLGI------------FWFKAENFAAPtttaiGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMP 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321629   317 KAAKRTFWLITASYVTILTLIGCLVPSNDprllngsssVDAASSPLVIAIENggIKGLPSLMNAIILIAVVSVANSAVYA 396
Cdd:PRK11357 230 RALIGSCLLVLVLYTLLALVISGLMPFDK---------LANSETPISDALTW--IPALGSTAGIFVAITAMIVILGSLSS 298
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6321629   397 C----SRCMVAMAHIGNLPKFLNRVD-KRGRPMNAILLTLFFGLlsfvaasdkqaeVFTWLSALSGLSTIFCWMAI 467
Cdd:PRK11357 299 CvmyqPRLEYAMAKDNLFFKCFGHVHpKYNTPDVSIILQGALGI------------FFIFVSDLTSLLGYFTLVMC 362
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH