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Conserved domains on  [gi|51873055|ref|NP_001989|]
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fibulin-2 isoform b precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
430-490 1.39e-09

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


:

Pssm-ID: 237984  Cd Length: 70  Bit Score: 55.54  E-value: 1.39e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 51873055  430 PRSSPEGSTKD-LIETCCAAGQQWAIDNDECLEIPESGTEDNVCRTAQRHCCVSYLQEKSCM 490
Cdd:cd00017    1 KNSEKAAQYKDkELRKCCLDGMRENPMGQTCEERAAYITDGKECRKAFLECCVYAEELRDEE 62
EGF_CA pfam07645
Calcium-binding EGF domain;
1025-1059 2.16e-07

Calcium-binding EGF domain;


:

Pssm-ID: 429571  Cd Length: 32  Bit Score: 48.00  E-value: 2.16e-07
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 51873055   1025 DVDECALGTHNCSEAETCHNIQGSFRCLrfeCPPN 1059
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR---CPDG 32
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
515-563 2.75e-07

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


:

Pssm-ID: 237984  Cd Length: 70  Bit Score: 48.99  E-value: 2.75e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 51873055  515 YKQCCDCCGLGLRVRAEGQSCESNP---NLGYPCNHVMLSCCEGEEPLIVPE 563
Cdd:cd00017   11 DKELRKCCLDGMRENPMGQTCEERAayiTDGKECRKAFLECCVYAEELRDEE 62
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
616-644 7.89e-07

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


:

Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 46.47  E-value: 7.89e-07
                           10        20
                   ....*....|....*....|....*....
gi 51873055    616 CQHLCINTVGSYHCACFPGFSLQDDGRTC 644
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA smart00179
Calcium-binding EGF-like domain;
858-900 1.08e-06

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 46.09  E-value: 1.08e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873055     858 DVNECETGvHRCGEGQVCHNLPGSYRCDCKAGFQRdafGRGCI 900
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYTD---GRNCE 39
EGF_CA pfam07645
Calcium-binding EGF domain;
764-799 1.40e-06

Calcium-binding EGF domain;


:

Pssm-ID: 429571  Cd Length: 32  Bit Score: 45.69  E-value: 1.40e-06
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873055    764 DVDECAMGTHTCQPGFLCQNTKGSFYCqarqRCMDG 799
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
810-857 4.80e-06

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 44.55  E-value: 4.80e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 51873055     810 DINECTSLSePCRPGFSCINTVGSYTCQrnpliCARGYHasdDGTKCV 857
Cdd:smart00179    1 DIDECASGN-PCQNGGTCVNTVGSYRCE-----CPPGYT---DGRNCE 39
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
913-941 3.91e-05

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


:

Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 41.84  E-value: 3.91e-05
                           10        20
                   ....*....|....*....|....*....
gi 51873055    913 CQHTCENTLGSYRCSCASGFLLAADGKRC 941
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
cEGF pfam12662
Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved ...
964-985 6.02e-05

Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteriztic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue.


:

Pssm-ID: 463661  Cd Length: 22  Bit Score: 40.86  E-value: 6.02e-05
                           10        20
                   ....*....|....*....|..
gi 51873055    964 QCYCRQGYQLAEDGHTCTDIDE 985
Cdd:pfam12662    1 TCSCPPGYQLDPDGRTCVDIDE 22
EGF_CA pfam07645
Calcium-binding EGF domain;
719-754 1.17e-04

Calcium-binding EGF domain;


:

Pssm-ID: 429571  Cd Length: 32  Bit Score: 40.30  E-value: 1.17e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873055    719 DINECVTDLHTCSRGEHCVNTLGSFHCykalTCEPG 754
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
685-717 1.16e-03

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


:

Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 37.61  E-value: 1.16e-03
                           10        20        30
                   ....*....|....*....|....*....|...
gi 51873055    685 DNGPCKQVCSTVGGSAICSCFPGYAIMADGVSC 717
Cdd:pfam14670    4 NNGGCSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA smart00179
Calcium-binding EGF-like domain;
982-1024 2.23e-03

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 36.84  E-value: 2.23e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873055     982 DIDECAQGAGILCTFRCLNVPGSYQCACPEqGYTmtaNGRSCK 1024
Cdd:smart00179    1 DIDECASGNPCQNGGTCVNTVGSYRCECPP-GYT---DGRNCE 39
 
Name Accession Description Interval E-value
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
430-490 1.39e-09

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


Pssm-ID: 237984  Cd Length: 70  Bit Score: 55.54  E-value: 1.39e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 51873055  430 PRSSPEGSTKD-LIETCCAAGQQWAIDNDECLEIPESGTEDNVCRTAQRHCCVSYLQEKSCM 490
Cdd:cd00017    1 KNSEKAAQYKDkELRKCCLDGMRENPMGQTCEERAAYITDGKECRKAFLECCVYAEELRDEE 62
EGF_CA pfam07645
Calcium-binding EGF domain;
1025-1059 2.16e-07

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 48.00  E-value: 2.16e-07
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 51873055   1025 DVDECALGTHNCSEAETCHNIQGSFRCLrfeCPPN 1059
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR---CPDG 32
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
515-563 2.75e-07

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


Pssm-ID: 237984  Cd Length: 70  Bit Score: 48.99  E-value: 2.75e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 51873055  515 YKQCCDCCGLGLRVRAEGQSCESNP---NLGYPCNHVMLSCCEGEEPLIVPE 563
Cdd:cd00017   11 DKELRKCCLDGMRENPMGQTCEERAayiTDGKECRKAFLECCVYAEELRDEE 62
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
616-644 7.89e-07

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 46.47  E-value: 7.89e-07
                           10        20
                   ....*....|....*....|....*....
gi 51873055    616 CQHLCINTVGSYHCACFPGFSLQDDGRTC 644
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA smart00179
Calcium-binding EGF-like domain;
858-900 1.08e-06

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 46.09  E-value: 1.08e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873055     858 DVNECETGvHRCGEGQVCHNLPGSYRCDCKAGFQRdafGRGCI 900
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYTD---GRNCE 39
EGF_CA pfam07645
Calcium-binding EGF domain;
764-799 1.40e-06

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 45.69  E-value: 1.40e-06
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873055    764 DVDECAMGTHTCQPGFLCQNTKGSFYCqarqRCMDG 799
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
810-857 4.80e-06

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 44.55  E-value: 4.80e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 51873055     810 DINECTSLSePCRPGFSCINTVGSYTCQrnpliCARGYHasdDGTKCV 857
Cdd:smart00179    1 DIDECASGN-PCQNGGTCVNTVGSYRCE-----CPPGYT---DGRNCE 39
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
858-891 4.97e-06

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 44.16  E-value: 4.97e-06
                         10        20        30
                 ....*....|....*....|....*....|....
gi 51873055  858 DVNECETGvHRCGEGQVCHNLPGSYRCDCKAGFQ 891
Cdd:cd00054    1 DIDECASG-NPCQNGGTCVNTVGSYRCSCPPGYT 33
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
913-941 3.91e-05

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 41.84  E-value: 3.91e-05
                           10        20
                   ....*....|....*....|....*....
gi 51873055    913 CQHTCENTLGSYRCSCASGFLLAADGKRC 941
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA smart00179
Calcium-binding EGF-like domain;
901-942 5.22e-05

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 41.46  E-value: 5.22e-05
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 51873055     901 DVNECwaSPGRLCQH--TCENTLGSYRCSCASGFLlaaDGKRCE 942
Cdd:smart00179    1 DIDEC--ASGNPCQNggTCVNTVGSYRCECPPGYT---DGRNCE 39
EGF_CA pfam07645
Calcium-binding EGF domain;
858-889 5.33e-05

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 41.07  E-value: 5.33e-05
                           10        20        30
                   ....*....|....*....|....*....|..
gi 51873055    858 DVNECETGVHRCGEGQVCHNLPGSYRCDCKAG 889
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECRCPDG 32
cEGF pfam12662
Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved ...
964-985 6.02e-05

Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteriztic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue.


Pssm-ID: 463661  Cd Length: 22  Bit Score: 40.86  E-value: 6.02e-05
                           10        20
                   ....*....|....*....|..
gi 51873055    964 QCYCRQGYQLAEDGHTCTDIDE 985
Cdd:pfam12662    1 TCSCPPGYQLDPDGRTCVDIDE 22
EGF_CA pfam07645
Calcium-binding EGF domain;
719-754 1.17e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 40.30  E-value: 1.17e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873055    719 DINECVTDLHTCSRGEHCVNTLGSFHCykalTCEPG 754
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
810-848 1.79e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 39.93  E-value: 1.79e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 51873055  810 DINECTSLSePCRPGFSCINTVGSYTCQrnpliCARGYH 848
Cdd:cd00054    1 DIDECASGN-PCQNGGTCVNTVGSYRCS-----CPPGYT 33
EGF_CA smart00179
Calcium-binding EGF-like domain;
719-755 2.13e-04

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 39.54  E-value: 2.13e-04
                            10        20        30
                    ....*....|....*....|....*....|....*..
gi 51873055     719 DINECVTDlHTCSRGEHCVNTLGSFHCykalTCEPGY 755
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRC----ECPPGY 32
ANATO smart00104
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
445-480 2.72e-04

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 197517  Cd Length: 35  Bit Score: 39.24  E-value: 2.72e-04
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 51873055     445 CCAAGQQWAIDNDECLEIPESGTEDNvCRTAQRHCC 480
Cdd:smart00104    1 CCADGMRLAPMGETCEERAARINSGD-CRKAFLQCC 35
EGF_CA pfam07645
Calcium-binding EGF domain;
810-837 5.00e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 38.37  E-value: 5.00e-04
                           10        20
                   ....*....|....*....|....*...
gi 51873055    810 DINECTSLSEPCRPGFSCINTVGSYTCQ 837
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR 28
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
901-942 8.30e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 38.00  E-value: 8.30e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 51873055  901 DVNECwaSPGRLCQH--TCENTLGSYRCSCASGFLlaadGKRCE 942
Cdd:cd00054    1 DIDEC--ASGNPCQNggTCVNTVGSYRCSCPPGYT----GRNCE 38
EGF_CA smart00179
Calcium-binding EGF-like domain;
604-644 9.12e-04

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 38.00  E-value: 9.12e-04
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873055     604 DQDECLLlpGELCQH--LCINTVGSYHCACFPGFSlqdDGRTC 644
Cdd:smart00179    1 DIDECAS--GNPCQNggTCVNTVGSYRCECPPGYT---DGRNC 38
EGF_CA smart00179
Calcium-binding EGF-like domain;
764-800 1.05e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 37.61  E-value: 1.05e-03
                            10        20        30
                    ....*....|....*....|....*....|....*..
gi 51873055     764 DVDECAMGtHTCQPGFLCQNTKGSFYCQarqrCMDGF 800
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRCE----CPPGY 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
1025-1060 1.08e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 37.61  E-value: 1.08e-03
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 51873055    1025 DVDECALGtHNCSEAETCHNIQGSFRClrfECPPNY 1060
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRC---ECPPGY 32
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
685-717 1.16e-03

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 37.61  E-value: 1.16e-03
                           10        20        30
                   ....*....|....*....|....*....|...
gi 51873055    685 DNGPCKQVCSTVGGSAICSCFPGYAIMADGVSC 717
Cdd:pfam14670    4 NNGGCSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
719-758 1.88e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 36.85  E-value: 1.88e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 51873055  719 DINECvTDLHTCSRGEHCVNTLGSFHCykalTCEPGYALK 758
Cdd:cd00054    1 DIDEC-ASGNPCQNGGTCVNTVGSYRC----SCPPGYTGR 35
EGF_CA smart00179
Calcium-binding EGF-like domain;
982-1024 2.23e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 36.84  E-value: 2.23e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873055     982 DIDECAQGAGILCTFRCLNVPGSYQCACPEqGYTmtaNGRSCK 1024
Cdd:smart00179    1 DIDECASGNPCQNGGTCVNTVGSYRCECPP-GYT---DGRNCE 39
ANATO smart00104
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
521-553 2.30e-03

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 197517  Cd Length: 35  Bit Score: 36.54  E-value: 2.30e-03
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 51873055     521 CCGLGLRVRAEGQSCESNPNLGY--PCNHVMLSCC 553
Cdd:smart00104    1 CCADGMRLAPMGETCEERAARINsgDCRKAFLQCC 35
vWA_Matrilin cd01475
VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and ...
757-795 2.45e-03

VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.


Pssm-ID: 238752 [Multi-domain]  Cd Length: 224  Bit Score: 40.83  E-value: 2.45e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 51873055  757 LKDGECEDVDECAMGTHTCQPGflCQNTKGSFYCQARQR 795
Cdd:cd01475  179 FQGKICVVPDLCATLSHVCQQV--CISTPGSYLCACTEG 215
ANATO pfam01821
Anaphylotoxin-like domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated ...
445-480 2.50e-03

Anaphylotoxin-like domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 460347  Cd Length: 36  Bit Score: 36.48  E-value: 2.50e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873055    445 CCAAGQQWAIDNDECLEIPESGTEDNVCRTAQRHCC 480
Cdd:pfam01821    1 CCLDGMKRNPMGRSCEQRAARIKEGPRCRKAFLQCC 36
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
604-644 5.50e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 35.69  E-value: 5.50e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 51873055  604 DQDECLLLPGELCQHLCINTVGSYHCACFPGFSlqddGRTC 644
Cdd:cd00054    1 DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT----GRNC 37
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
1025-1060 8.73e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 35.31  E-value: 8.73e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 51873055 1025 DVDECALGtHNCSEAETCHNIQGSFRClrfECPPNY 1060
Cdd:cd00054    1 DIDECASG-NPCQNGGTCVNTVGSYRC---SCPPGY 32
 
Name Accession Description Interval E-value
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
430-490 1.39e-09

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


Pssm-ID: 237984  Cd Length: 70  Bit Score: 55.54  E-value: 1.39e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 51873055  430 PRSSPEGSTKD-LIETCCAAGQQWAIDNDECLEIPESGTEDNVCRTAQRHCCVSYLQEKSCM 490
Cdd:cd00017    1 KNSEKAAQYKDkELRKCCLDGMRENPMGQTCEERAAYITDGKECRKAFLECCVYAEELRDEE 62
EGF_CA pfam07645
Calcium-binding EGF domain;
1025-1059 2.16e-07

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 48.00  E-value: 2.16e-07
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 51873055   1025 DVDECALGTHNCSEAETCHNIQGSFRCLrfeCPPN 1059
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR---CPDG 32
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
515-563 2.75e-07

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


Pssm-ID: 237984  Cd Length: 70  Bit Score: 48.99  E-value: 2.75e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 51873055  515 YKQCCDCCGLGLRVRAEGQSCESNP---NLGYPCNHVMLSCCEGEEPLIVPE 563
Cdd:cd00017   11 DKELRKCCLDGMRENPMGQTCEERAayiTDGKECRKAFLECCVYAEELRDEE 62
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
616-644 7.89e-07

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 46.47  E-value: 7.89e-07
                           10        20
                   ....*....|....*....|....*....
gi 51873055    616 CQHLCINTVGSYHCACFPGFSLQDDGRTC 644
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA smart00179
Calcium-binding EGF-like domain;
858-900 1.08e-06

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 46.09  E-value: 1.08e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873055     858 DVNECETGvHRCGEGQVCHNLPGSYRCDCKAGFQRdafGRGCI 900
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYTD---GRNCE 39
EGF_CA pfam07645
Calcium-binding EGF domain;
764-799 1.40e-06

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 45.69  E-value: 1.40e-06
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873055    764 DVDECAMGTHTCQPGFLCQNTKGSFYCqarqRCMDG 799
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
810-857 4.80e-06

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 44.55  E-value: 4.80e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 51873055     810 DINECTSLSePCRPGFSCINTVGSYTCQrnpliCARGYHasdDGTKCV 857
Cdd:smart00179    1 DIDECASGN-PCQNGGTCVNTVGSYRCE-----CPPGYT---DGRNCE 39
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
858-891 4.97e-06

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 44.16  E-value: 4.97e-06
                         10        20        30
                 ....*....|....*....|....*....|....
gi 51873055  858 DVNECETGvHRCGEGQVCHNLPGSYRCDCKAGFQ 891
Cdd:cd00054    1 DIDECASG-NPCQNGGTCVNTVGSYRCSCPPGYT 33
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
913-941 3.91e-05

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 41.84  E-value: 3.91e-05
                           10        20
                   ....*....|....*....|....*....
gi 51873055    913 CQHTCENTLGSYRCSCASGFLLAADGKRC 941
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA smart00179
Calcium-binding EGF-like domain;
901-942 5.22e-05

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 41.46  E-value: 5.22e-05
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 51873055     901 DVNECwaSPGRLCQH--TCENTLGSYRCSCASGFLlaaDGKRCE 942
Cdd:smart00179    1 DIDEC--ASGNPCQNggTCVNTVGSYRCECPPGYT---DGRNCE 39
EGF_CA pfam07645
Calcium-binding EGF domain;
858-889 5.33e-05

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 41.07  E-value: 5.33e-05
                           10        20        30
                   ....*....|....*....|....*....|..
gi 51873055    858 DVNECETGVHRCGEGQVCHNLPGSYRCDCKAG 889
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECRCPDG 32
cEGF pfam12662
Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved ...
964-985 6.02e-05

Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteriztic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue.


Pssm-ID: 463661  Cd Length: 22  Bit Score: 40.86  E-value: 6.02e-05
                           10        20
                   ....*....|....*....|..
gi 51873055    964 QCYCRQGYQLAEDGHTCTDIDE 985
Cdd:pfam12662    1 TCSCPPGYQLDPDGRTCVDIDE 22
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
952-980 7.56e-05

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 41.07  E-value: 7.56e-05
                           10        20
                   ....*....|....*....|....*....
gi 51873055    952 CSQECANIYGSYQCYCRQGYQLAEDGHTC 980
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA pfam07645
Calcium-binding EGF domain;
719-754 1.17e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 40.30  E-value: 1.17e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873055    719 DINECVTDLHTCSRGEHCVNTLGSFHCykalTCEPG 754
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
810-848 1.79e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 39.93  E-value: 1.79e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 51873055  810 DINECTSLSePCRPGFSCINTVGSYTCQrnpliCARGYH 848
Cdd:cd00054    1 DIDECASGN-PCQNGGTCVNTVGSYRCS-----CPPGYT 33
EGF_CA smart00179
Calcium-binding EGF-like domain;
719-755 2.13e-04

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 39.54  E-value: 2.13e-04
                            10        20        30
                    ....*....|....*....|....*....|....*..
gi 51873055     719 DINECVTDlHTCSRGEHCVNTLGSFHCykalTCEPGY 755
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRC----ECPPGY 32
ANATO smart00104
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
445-480 2.72e-04

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 197517  Cd Length: 35  Bit Score: 39.24  E-value: 2.72e-04
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 51873055     445 CCAAGQQWAIDNDECLEIPESGTEDNvCRTAQRHCC 480
Cdd:smart00104    1 CCADGMRLAPMGETCEERAARINSGD-CRKAFLQCC 35
EGF_CA pfam07645
Calcium-binding EGF domain;
810-837 5.00e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 38.37  E-value: 5.00e-04
                           10        20
                   ....*....|....*....|....*...
gi 51873055    810 DINECTSLSEPCRPGFSCINTVGSYTCQ 837
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR 28
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
901-942 8.30e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 38.00  E-value: 8.30e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 51873055  901 DVNECwaSPGRLCQH--TCENTLGSYRCSCASGFLlaadGKRCE 942
Cdd:cd00054    1 DIDEC--ASGNPCQNggTCVNTVGSYRCSCPPGYT----GRNCE 38
EGF_CA smart00179
Calcium-binding EGF-like domain;
604-644 9.12e-04

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 38.00  E-value: 9.12e-04
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873055     604 DQDECLLlpGELCQH--LCINTVGSYHCACFPGFSlqdDGRTC 644
Cdd:smart00179    1 DIDECAS--GNPCQNggTCVNTVGSYRCECPPGYT---DGRNC 38
EGF_CA smart00179
Calcium-binding EGF-like domain;
764-800 1.05e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 37.61  E-value: 1.05e-03
                            10        20        30
                    ....*....|....*....|....*....|....*..
gi 51873055     764 DVDECAMGtHTCQPGFLCQNTKGSFYCQarqrCMDGF 800
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRCE----CPPGY 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
1025-1060 1.08e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 37.61  E-value: 1.08e-03
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 51873055    1025 DVDECALGtHNCSEAETCHNIQGSFRClrfECPPNY 1060
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRC---ECPPGY 32
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
685-717 1.16e-03

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 37.61  E-value: 1.16e-03
                           10        20        30
                   ....*....|....*....|....*....|...
gi 51873055    685 DNGPCKQVCSTVGGSAICSCFPGYAIMADGVSC 717
Cdd:pfam14670    4 NNGGCSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
cEGF pfam12662
Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved ...
925-946 1.53e-03

Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteriztic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue.


Pssm-ID: 463661  Cd Length: 22  Bit Score: 37.00  E-value: 1.53e-03
                           10        20
                   ....*....|....*....|..
gi 51873055    925 RCSCASGFLLAADGKRCEDVNE 946
Cdd:pfam12662    1 TCSCPPGYQLDPDGRTCVDIDE 22
vWA_Matrilin cd01475
VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and ...
899-939 1.65e-03

VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.


Pssm-ID: 238752 [Multi-domain]  Cd Length: 224  Bit Score: 41.22  E-value: 1.65e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 51873055  899 CIDVNECwASPGRLCQHTCENTLGSYRCSCASGFLLAADGK 939
Cdd:cd01475  184 CVVPDLC-ATLSHVCQQVCISTPGSYLCACTEGYALLEDNK 223
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
719-758 1.88e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 36.85  E-value: 1.88e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 51873055  719 DINECvTDLHTCSRGEHCVNTLGSFHCykalTCEPGYALK 758
Cdd:cd00054    1 DIDEC-ASGNPCQNGGTCVNTVGSYRC----SCPPGYTGR 35
EGF_CA smart00179
Calcium-binding EGF-like domain;
982-1024 2.23e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 36.84  E-value: 2.23e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873055     982 DIDECAQGAGILCTFRCLNVPGSYQCACPEqGYTmtaNGRSCK 1024
Cdd:smart00179    1 DIDECASGNPCQNGGTCVNTVGSYRCECPP-GYT---DGRNCE 39
ANATO smart00104
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
521-553 2.30e-03

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 197517  Cd Length: 35  Bit Score: 36.54  E-value: 2.30e-03
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 51873055     521 CCGLGLRVRAEGQSCESNPNLGY--PCNHVMLSCC 553
Cdd:smart00104    1 CCADGMRLAPMGETCEERAARINsgDCRKAFLQCC 35
vWA_Matrilin cd01475
VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and ...
757-795 2.45e-03

VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.


Pssm-ID: 238752 [Multi-domain]  Cd Length: 224  Bit Score: 40.83  E-value: 2.45e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 51873055  757 LKDGECEDVDECAMGTHTCQPGflCQNTKGSFYCQARQR 795
Cdd:cd01475  179 FQGKICVVPDLCATLSHVCQQV--CISTPGSYLCACTEG 215
ANATO pfam01821
Anaphylotoxin-like domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated ...
445-480 2.50e-03

Anaphylotoxin-like domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 460347  Cd Length: 36  Bit Score: 36.48  E-value: 2.50e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873055    445 CCAAGQQWAIDNDECLEIPESGTEDNVCRTAQRHCC 480
Cdd:pfam01821    1 CCLDGMKRNPMGRSCEQRAARIKEGPRCRKAFLQCC 36
vWA_Matrilin cd01475
VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and ...
856-890 3.69e-03

VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.


Pssm-ID: 238752 [Multi-domain]  Cd Length: 224  Bit Score: 40.45  E-value: 3.69e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 51873055  856 CVDVNECETGVHRCGegQVCHNLPGSYRCDCKAGF 890
Cdd:cd01475  184 CVVPDLCATLSHVCQ--QVCISTPGSYLCACTEGY 216
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
764-800 5.34e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 35.69  E-value: 5.34e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 51873055  764 DVDECAMGtHTCQPGFLCQNTKGSFYCQarqrCMDGF 800
Cdd:cd00054    1 DIDECASG-NPCQNGGTCVNTVGSYRCS----CPPGY 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
604-644 5.50e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 35.69  E-value: 5.50e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 51873055  604 DQDECLLLPGELCQHLCINTVGSYHCACFPGFSlqddGRTC 644
Cdd:cd00054    1 DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT----GRNC 37
cEGF pfam12662
Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved ...
702-722 6.66e-03

Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteriztic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue.


Pssm-ID: 463661  Cd Length: 22  Bit Score: 35.08  E-value: 6.66e-03
                           10        20
                   ....*....|....*....|.
gi 51873055    702 CSCFPGYAIMADGVSCEDINE 722
Cdd:pfam12662    2 CSCPPGYQLDPDGRTCVDIDE 22
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
1025-1060 8.73e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 35.31  E-value: 8.73e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 51873055 1025 DVDECALGtHNCSEAETCHNIQGSFRClrfECPPNY 1060
Cdd:cd00054    1 DIDECASG-NPCQNGGTCVNTVGSYRC---SCPPGY 32
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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