spermatogenesis-associated protein 2 isoform 1 [Mus musculus]
List of domain hits
Name | Accession | Description | Interval | E-value | ||
Bbox1 | cd19757 | B-box-type 1 zinc finger (Bbox1); The B-box-type zinc finger is a short zinc binding domain of ... |
455-498 | 2.71e-03 | ||
B-box-type 1 zinc finger (Bbox1); The B-box-type zinc finger is a short zinc binding domain of around 40 amino acid residues in length. It has been found in transcription factors, ribonucleoproteins and proto-oncoproteins, such as in TRIM (tripartite motif) proteins that consist of an N-terminal RING finger (originally called an A-box), followed by 1-2 B-box domains and a coiled-coil domain (also called RBCC for Ring, B-box, Coiled-Coil). The B-box-type zinc finger often presents in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain, in functionally unrelated proteins, most likely mediating protein-protein interactions. Based on different consensus sequences and the spacing of the 7-8 zinc-binding residues, the B-box-type zinc fingers can be divided into two groups, type 1 (Bbox1: C6H2) and type 2 (Bbox2: CHC3H2). This family corresponds to the type 1 B-box (Bbox1). : Pssm-ID: 380815 [Multi-domain] Cd Length: 44 Bit Score: 35.93 E-value: 2.71e-03
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Name | Accession | Description | Interval | E-value | ||
Bbox1 | cd19757 | B-box-type 1 zinc finger (Bbox1); The B-box-type zinc finger is a short zinc binding domain of ... |
455-498 | 2.71e-03 | ||
B-box-type 1 zinc finger (Bbox1); The B-box-type zinc finger is a short zinc binding domain of around 40 amino acid residues in length. It has been found in transcription factors, ribonucleoproteins and proto-oncoproteins, such as in TRIM (tripartite motif) proteins that consist of an N-terminal RING finger (originally called an A-box), followed by 1-2 B-box domains and a coiled-coil domain (also called RBCC for Ring, B-box, Coiled-Coil). The B-box-type zinc finger often presents in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain, in functionally unrelated proteins, most likely mediating protein-protein interactions. Based on different consensus sequences and the spacing of the 7-8 zinc-binding residues, the B-box-type zinc fingers can be divided into two groups, type 1 (Bbox1: C6H2) and type 2 (Bbox2: CHC3H2). This family corresponds to the type 1 B-box (Bbox1). Pssm-ID: 380815 [Multi-domain] Cd Length: 44 Bit Score: 35.93 E-value: 2.71e-03
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Name | Accession | Description | Interval | E-value | ||
Bbox1 | cd19757 | B-box-type 1 zinc finger (Bbox1); The B-box-type zinc finger is a short zinc binding domain of ... |
455-498 | 2.71e-03 | ||
B-box-type 1 zinc finger (Bbox1); The B-box-type zinc finger is a short zinc binding domain of around 40 amino acid residues in length. It has been found in transcription factors, ribonucleoproteins and proto-oncoproteins, such as in TRIM (tripartite motif) proteins that consist of an N-terminal RING finger (originally called an A-box), followed by 1-2 B-box domains and a coiled-coil domain (also called RBCC for Ring, B-box, Coiled-Coil). The B-box-type zinc finger often presents in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain, in functionally unrelated proteins, most likely mediating protein-protein interactions. Based on different consensus sequences and the spacing of the 7-8 zinc-binding residues, the B-box-type zinc fingers can be divided into two groups, type 1 (Bbox1: C6H2) and type 2 (Bbox2: CHC3H2). This family corresponds to the type 1 B-box (Bbox1). Pssm-ID: 380815 [Multi-domain] Cd Length: 44 Bit Score: 35.93 E-value: 2.71e-03
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Blast search parameters | ||||
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