NALCN channel auxiliary factor 1 isoform 2 [Rattus norvegicus]
List of domain hits
Name | Accession | Description | Interval | E-value | ||
Mid1 super family | cl15172 | Stretch-activated Ca2+-permeable channel component; MID1 is a yeast Saccharomyces cerevisiae ... |
278-323 | 2.61e-03 | ||
Stretch-activated Ca2+-permeable channel component; MID1 is a yeast Saccharomyces cerevisiae gene encoding a plasma membrane protein required for Ca2+ influx induced by the mating pheromone, alpha-factor. Mid1 protein plays a crucial role in supplying Ca2+ during the mating process. Mid1 is composed of 548-amino-acid residues with four hydrophobic regions named H1, H2, H3 and H4, and two cysteine-rich regions (C1 and C2) at the C-terminal. This family contains the H3, H4, C1 and C2 regions. suggesting that H1 is a signal sequence responsible for the alpha-factor-induced Mid1 delivery to the plasma membrane. The region from H1 to H3 is required for the localization of Mid1 in the plasma and ER membranes. Trafficking of Mid1-GFP to the plasma membrane is dependent on the N-glycosylation of Mid1 and the transporter protein Sec12. This findings suggests that the trafficking of Mid1-GFP to the plasma membrane requires a Sec12-dependent pathway from the ER to the Golgi, and that Mid1 is recruited via a Sec6- and Sec7-independent pathway from the Golgi to the plasma membrane. The actual alignment was detected with superfamily member pfam12929: Pssm-ID: 432882 Cd Length: 429 Bit Score: 39.53 E-value: 2.61e-03
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Name | Accession | Description | Interval | E-value | ||
Mid1 | pfam12929 | Stretch-activated Ca2+-permeable channel component; MID1 is a yeast Saccharomyces cerevisiae ... |
278-323 | 2.61e-03 | ||
Stretch-activated Ca2+-permeable channel component; MID1 is a yeast Saccharomyces cerevisiae gene encoding a plasma membrane protein required for Ca2+ influx induced by the mating pheromone, alpha-factor. Mid1 protein plays a crucial role in supplying Ca2+ during the mating process. Mid1 is composed of 548-amino-acid residues with four hydrophobic regions named H1, H2, H3 and H4, and two cysteine-rich regions (C1 and C2) at the C-terminal. This family contains the H3, H4, C1 and C2 regions. suggesting that H1 is a signal sequence responsible for the alpha-factor-induced Mid1 delivery to the plasma membrane. The region from H1 to H3 is required for the localization of Mid1 in the plasma and ER membranes. Trafficking of Mid1-GFP to the plasma membrane is dependent on the N-glycosylation of Mid1 and the transporter protein Sec12. This findings suggests that the trafficking of Mid1-GFP to the plasma membrane requires a Sec12-dependent pathway from the ER to the Golgi, and that Mid1 is recruited via a Sec6- and Sec7-independent pathway from the Golgi to the plasma membrane. Pssm-ID: 432882 Cd Length: 429 Bit Score: 39.53 E-value: 2.61e-03
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Name | Accession | Description | Interval | E-value | ||
Mid1 | pfam12929 | Stretch-activated Ca2+-permeable channel component; MID1 is a yeast Saccharomyces cerevisiae ... |
278-323 | 2.61e-03 | ||
Stretch-activated Ca2+-permeable channel component; MID1 is a yeast Saccharomyces cerevisiae gene encoding a plasma membrane protein required for Ca2+ influx induced by the mating pheromone, alpha-factor. Mid1 protein plays a crucial role in supplying Ca2+ during the mating process. Mid1 is composed of 548-amino-acid residues with four hydrophobic regions named H1, H2, H3 and H4, and two cysteine-rich regions (C1 and C2) at the C-terminal. This family contains the H3, H4, C1 and C2 regions. suggesting that H1 is a signal sequence responsible for the alpha-factor-induced Mid1 delivery to the plasma membrane. The region from H1 to H3 is required for the localization of Mid1 in the plasma and ER membranes. Trafficking of Mid1-GFP to the plasma membrane is dependent on the N-glycosylation of Mid1 and the transporter protein Sec12. This findings suggests that the trafficking of Mid1-GFP to the plasma membrane requires a Sec12-dependent pathway from the ER to the Golgi, and that Mid1 is recruited via a Sec6- and Sec7-independent pathway from the Golgi to the plasma membrane. Pssm-ID: 432882 Cd Length: 429 Bit Score: 39.53 E-value: 2.61e-03
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Blast search parameters | ||||
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