|
Name |
Accession |
Description |
Interval |
E-value |
| GMPK |
cd00071 |
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), ... |
355-476 |
8.10e-42 |
|
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and guanosine diphosphate (GDP). It plays an essential role in the biosynthesis of guanosine triphosphate (GTP). This enzyme is also important for the activation of some antiviral and anticancer agents, such as acyclovir, ganciclovir, carbovir, and thiopurines.
Pssm-ID: 238026 Cd Length: 137 Bit Score: 149.99 E-value: 8.10e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 355 MLILTGPAACGKRELAHRLCRQFSTYFRYGACHTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFILTFNYGNHNYGLNR 434
Cdd:cd00071 1 LIVLSGPSGVGKSTLLKRLLEEFDPNFGFSVSHTTRKPRPGEVDGVDYHFVSKEEFERLIENGEFLEWAEFHGNYYGTSK 80
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2194564643 435 DTIEGIARDGLASCIHMELEGVRSLKYSYFEPRYILVVPMDK 476
Cdd:cd00071 81 AAVEEALAEGKIVILEIDVQGARQVKKSYPDAVSIFILPPDY 122
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
142-310 |
9.57e-35 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 132.60 E-value: 9.57e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 142 NLISEMYDLSAYHTLTQLILDNNEIEEITGLENCISLTHLSLAGNKITTIKGLGTLP-IKVLSLSNNMI----------E 210
Cdd:cd21340 34 NKITKIENLEFLTNLTHLYLQNNQIEKIENLENLVNLKKLYLGGNRISVVEGLENLTnLEELHIENQRLppgekltfdpR 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 211 TITGLeeLKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIKELSEI-EYIENLPILRVLNLLRNPIQTKPEYWFFVI 289
Cdd:cd21340 114 SLAAL--SNSLRVLNISGNNIDSLEPLAPLRNLEQLDASNNQISDLEELlDLLSSWPSLRELDLTGNPVCKKPKYRDKII 191
|
170 180
....*....|....*....|.
gi 2194564643 290 YMLLRLTELDQQKIKVEEKVF 310
Cdd:cd21340 192 LASKSLEVLDGKEITDTERQF 212
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
133-279 |
8.62e-27 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 114.65 E-value: 8.62e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 133 NLSKVDFSSNLISEM-YDLSAYHTLTQLILDNNEIEEI-TGLENCISLTHLSLAGNKITTI-KGLGTLP-IKVLSLSNNM 208
Cdd:COG4886 160 NLKSLDLSNNQLTDLpEELGNLTNLKELDLSNNQITDLpEPLGNLTNLEELDLSGNQLTDLpEPLANLTnLETLDLSNNQ 239
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2194564643 209 IETITGLEELKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIKELSeIEYIENLPILRVLNLLRNPIQ 279
Cdd:COG4886 240 LTDLPELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLK-LKELELLLGLNSLLLLLLLLN 309
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
97-299 |
2.45e-26 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 113.49 E-value: 2.45e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 97 NLEDKYDGILREETVAEAITGLGWSGRGTEQVYLNLNLSKVDFSSNliSEMYDLSAyhtLTQLILDNNEIEEI-TGLENC 175
Cdd:COG4886 61 LLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN--EELSNLTN---LESLDLSGNQLTDLpEELANL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 176 ISLTHLSLAGNKITTI-KGLGTLP-IKVLSLSNNMIETIT-GLEELKALQNLDLSHNQIS----SLQGLENhdlLEVINL 248
Cdd:COG4886 136 TNLKELDLSNNQLTDLpEPLGNLTnLKSLDLSNNQLTDLPeELGNLTNLKELDLSNNQITdlpePLGNLTN---LEELDL 212
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2194564643 249 EDNKIKELSEIeyIENLPILRVLNLLRNPIQTKPEywffvIYMLLRLTELD 299
Cdd:COG4886 213 SGNQLTDLPEP--LANLTNLETLDLSNNQLTDLPE-----LGNLTNLEELD 256
|
|
| GuKc |
smart00072 |
Guanylate kinase homologues; Active enzymes catalyze ATP-dependent phosphorylation of GMP to ... |
365-538 |
1.84e-22 |
|
Guanylate kinase homologues; Active enzymes catalyze ATP-dependent phosphorylation of GMP to GDP. Structure resembles that of adenylate kinase. So-called membrane-associated guanylate kinase homologues (MAGUKs) do not possess guanylate kinase activities; instead at least some possess protein-binding functions.
Pssm-ID: 214504 [Multi-domain] Cd Length: 174 Bit Score: 95.82 E-value: 1.84e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 365 GKRELAHRLCRQFSTYFRYGACHTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFILTFNYGNHNYGLNRDTIEGIARDG 444
Cdd:smart00072 4 GKGTLLAELIQEIPDAFERVVSHTTRPPRPGEVNGVDYHFVSKEEFEDDIKSGLFLEWGEYEGNYYGTSKETIRQVAEKG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 445 LASCIHMELEGVRSLKYSYFEPRYILVVPMDKEKyegylRRKGLFSRAEIEIAVSRVDLYV-KVNQKYPGYFDAVINADD 523
Cdd:smart00072 84 KHCLLDIDPQGVKQLRKAQLYPIVIFIAPPSSEE-----LERRLRQRGTETSERIQKRLAAaQKEAQEYHLFDYVIVNDD 158
|
170
....*....|....*
gi 2194564643 524 MDIAYQKLSELIREY 538
Cdd:smart00072 159 LEDAYEELKEILEAE 173
|
|
| guanyl_kin |
TIGR03263 |
guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP ... |
355-537 |
1.96e-22 |
|
guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP kinase. This enzyme transfers a phosphate from ATP to GMP, yielding ADP and GDP. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]
Pssm-ID: 213788 Cd Length: 179 Bit Score: 95.64 E-value: 1.96e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 355 MLILTGPAACGKRELAHRLCRQFSTyFRYGACHTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFILTFNYGNHNYGLNR 434
Cdd:TIGR03263 2 LIVISGPSGAGKSTLVKALLEEDPN-LKFSISATTRKPRPGEVDGVDYFFVSKEEFEEMIKAGEFLEWAEVHGNYYGTPK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 435 DTIEGIARDGLASCIHMELEGVRSLKYSYFEPRYILVVPMDKEKYEGYLRRKGLFSRAEIE--IAVSRVDLyvkvnqKYP 512
Cdd:TIGR03263 81 SPVEEALAAGKDVLLEIDVQGARQVKKKFPDAVSIFILPPSLEELERRLRKRGTDSEEVIErrLAKAKKEI------AHA 154
|
170 180
....*....|....*....|....*
gi 2194564643 513 GYFDAVINADDMDIAYQKLSELIRE 537
Cdd:TIGR03263 155 DEFDYVIVNDDLEKAVEELKSIILA 179
|
|
| Guanylate_kin |
pfam00625 |
Guanylate kinase; |
356-538 |
6.88e-21 |
|
Guanylate kinase;
Pssm-ID: 395500 Cd Length: 182 Bit Score: 91.67 E-value: 6.88e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 356 LILTGPAACGKRELAHRLCRQFSTYFRYGACHTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFILTFNYGNHNYGLNRD 435
Cdd:pfam00625 5 VVLSGPSGVGKSHIKKALLSEYPDKFGYSVPHTTRPPRKGEVDGKDYYFVSKEEMERDISANEFLEYAQFSGNMYGTSVE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 436 TIEGIARDGLASCIHMELEGVRSLKYSYFEPRYILVVPMDKEKYEGYLRRKGLFSRAEI--EIAVSRVDLyvkvnQKYPg 513
Cdd:pfam00625 85 TIEQIHEQGKIVILDVDPQGVKQLRKAELSPISVFIKPPSLKVLQRRLKGRGKEQEEKInkRMAAAEQEF-----QHYE- 158
|
170 180
....*....|....*....|....*
gi 2194564643 514 yFDAVINADDMDIAYQKLSELIREY 538
Cdd:pfam00625 159 -FDVIIVNDDLEEAYKKLKEALEAE 182
|
|
| PLN02772 |
PLN02772 |
guanylate kinase |
350-555 |
1.39e-18 |
|
guanylate kinase
Pssm-ID: 215414 [Multi-domain] Cd Length: 398 Bit Score: 89.51 E-value: 1.39e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 350 DAPYPMLIlTGPAACGKRELAHRLCRQFSTYFRYGACHTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFILTFNYGNHN 429
Cdd:PLN02772 133 NAEKPIVI-SGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPREMEKDGVHYHFTERSVMEKEIKDGKFLEFASVHGNL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 430 YGLNRDTIEGIARDGLASCIHMELEGVRSLKYSYFEPRYILVVPMDKEKYEGYLRRKGLFSRAEIEIAVSRVDLYVKVNQ 509
Cdd:PLN02772 212 YGTSIEAVEVVTDSGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEELEKRLRARGTETEEQIQKRLRNAEAELEQGK 291
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2194564643 510 KyPGYFDAVINADDMDIAYQKLSELireyLGLTETAAKTLAPTAAG 555
Cdd:PLN02772 292 S-SGIFDHILYNDNLEECYKNLKKL----LGLDGLAAVNGVEAPEG 332
|
|
| Gmk |
COG0194 |
Guanylate kinase [Nucleotide transport and metabolism]; |
355-536 |
1.83e-18 |
|
Guanylate kinase [Nucleotide transport and metabolism];
Pssm-ID: 439964 Cd Length: 190 Bit Score: 84.74 E-value: 1.83e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 355 MLILTGPAACGKRELAHRLCRQFSTyFRYGACHTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFI-LTFNYGNHnYGLN 433
Cdd:COG0194 4 LIVLSGPSGAGKTTLVKALLERDPD-LRFSVSATTRPPRPGEVDGVDYHFVSREEFERMIENGEFLeWAEVHGNY-YGTP 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 434 RDTIEgiarDGLASCIHM----ELEGVRSLKYSYFEPRYILVVPMDKEKYEGYLRRKGLFSRAEIE--IAVSRVDLyvkv 507
Cdd:COG0194 82 KAEVE----EALAAGKDVlleiDVQGARQVKKKFPDAVSIFILPPSLEELERRLRGRGTDSEEVIErrLAKAREEL---- 153
|
170 180
....*....|....*....|....*....
gi 2194564643 508 nqKYPGYFDAVINADDMDIAYQKLSELIR 536
Cdd:COG0194 154 --AHADEFDYVVVNDDLDRAVEELKAIIR 180
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
617-1172 |
4.66e-18 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 90.77 E-value: 4.66e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 617 GEPPEKET-NVPQQVSSSALGiPQQAQDLPPKVKEEDgQPANLPPKITTEMDGPEDEPGPPVPKADQSStlASQEPPQQP 695
Cdd:PHA03247 2590 DAPPQSARpRAPVDDRGDPRG-PAPPSPLPPDTHAPD-PPPPSPSPAANEPDPHPPPTVPPPERPRDDP--APGRVSRPR 2665
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 696 APAPTLSPQPAPAPTLSPQPapaPTLSPQPAPAPTLSPQPDQDKESgETKVAPSNPALSEPAQGADLASLSPqrvqdegT 775
Cdd:PHA03247 2666 RARRLGRAAQASSPPQRPRR---RAARPTVGSLTSLADPPPPPPTP-EPAPHALVSATPLPPGPAAARQASP-------A 2734
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 776 ESANPAPRSSthtlPEDPSHTEVEKPTGGSQRPLKEETPKAEVMRAGTPYPEIPPPQDSTTKVrEQPGALLPRSRLAPTR 855
Cdd:PHA03247 2735 LPAAPAPPAV----PAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSE-SRESLPSPWDPADPPA 2809
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 856 LPQPQTLAPLQSRRPTPKLLSPSreEALGTSSDQTPNPSPRSFP-----AQDGDPSKLPPISPSQSKPPRNSSPPtahsp 930
Cdd:PHA03247 2810 AVLAPAAALPPAASPAGPLPPPT--SAQPTAPPPPPGPPPPSLPlggsvAPGGDVRRRPPSRSPAAKPAAPARPP----- 2882
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 931 qqgqvgkASEVKLPLISPPVQEQAQqhTPNPPQEEEAPTVQLPtipaPSTEPQLPQNTEPRPASKPAREKKTPkvgrass 1010
Cdd:PHA03247 2883 -------VRRLARPAVSRSTESFAL--PPDQPERPPQPQAPPP----PQPQPQPPPPPQPQPPPPPPPRPQPP------- 2942
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1011 kkvldLQATPHSQGPTKQKGAKKKNLMQKETAKESPQQRKMPvgnSQTAPQLESHDKPTPRNESDPLDFRSSPSHTEPVP 1090
Cdd:PHA03247 2943 -----LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRV---PQPAPSREAPASSTPPLTGHSLSRVSSWASSLALH 3014
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1091 ADPqnqeknhkAHKPRKKAQTNPTPKDVAQSTHTSPNGEMSEGLPQGNETALGEDQPTREGQPPQDPAKSAQEGSAPVLH 1170
Cdd:PHA03247 3015 EET--------DPPPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPFAHEPDPATPEAGARESPSSQ 3086
|
..
gi 2194564643 1171 PG 1172
Cdd:PHA03247 3087 FG 3088
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
669-1170 |
5.89e-17 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 87.30 E-value: 5.89e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 669 PEDEPGPPVPKADQSSTlASQEPPQQPAPAPT-------LSPQPApAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKES 741
Cdd:PHA03247 2553 PPLPPAAPPAAPDRSVP-PPRPAPRPSEPAVTsrarrpdAPPQSA-RPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 742 GetkvapsNPALSEPAQGADLASLSPQRVQDEGTESANPAPRSSTHTLPEDPSHTEVEKPTGGSQRPlkeetPKAEVMRA 821
Cdd:PHA03247 2631 P-------SPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARP-----TVGSLTSL 2698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 822 GTPYPEIPPPQdsttkvreqpgallPRSRLAPTRLPQPQTLAPLQSRRPTPKLLSPSREEALGTSSDQTPNPSPRSfPAQ 901
Cdd:PHA03247 2699 ADPPPPPPTPE--------------PAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP-PTT 2763
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 902 DGDPSKLPPISPSQSKPPRNSSPPTAhspqqgqvgKASEVKLPLISPPvqEQAQQHTPNPPQEEEAPTVQLPTIPAPSte 981
Cdd:PHA03247 2764 AGPPAPAPPAAPAAGPPRRLTRPAVA---------SLSESRESLPSPW--DPADPPAAVLAPAAALPPAASPAGPLPP-- 2830
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 982 PQLPQNTEPRPASKPAREKKTPKVGRASSKKVldlqatpHSQGPTKQKGAKKknlmqkeTAKESPQQRKMPvgnsqtAPQ 1061
Cdd:PHA03247 2831 PTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDV-------RRRPPSRSPAAKP-------AAPARPPVRRLA------RPA 2890
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1062 LESHDKPTPRNESDPldfrsSPSHTEPVPADPQNQEKNHKAHKPRKKAQTNPTPK-DVAQSTHTSPNGEMSEGLPQGNET 1140
Cdd:PHA03247 2891 VSRSTESFALPPDQP-----ERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQpPLAPTTDPAGAGEPSGAVPQPWLG 2965
|
490 500 510
....*....|....*....|....*....|..
gi 2194564643 1141 AL--GEDQPTREGQPPQDPAKSAQEGSAPVLH 1170
Cdd:PHA03247 2966 ALvpGRVAVPRFRVPQPAPSREAPASSTPPLT 2997
|
|
| gmk |
PRK00300 |
guanylate kinase; Provisional |
355-536 |
1.92e-14 |
|
guanylate kinase; Provisional
Pssm-ID: 234719 Cd Length: 205 Bit Score: 73.59 E-value: 1.92e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 355 MLILTGPAACGKRELAHRLCRQFSTyFRYGACHTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFI--LTFnYGNHnYGL 432
Cdd:PRK00300 7 LIVLSGPSGAGKSTLVKALLERDPN-LQLSVSATTRAPRPGEVDGVDYFFVSKEEFEEMIENGEFLewAEV-FGNY-YGT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 433 NRDTIEgiarDGLASCIHM----ELEGVRSLKYSYFEPRYILVVPMDKEKYEGYLRRKGL---------FSRAEIEIA-V 498
Cdd:PRK00300 84 PRSPVE----EALAAGKDVlleiDWQGARQVKKKMPDAVSIFILPPSLEELERRLRGRGTdseeviarrLAKAREEIAhA 159
|
170 180 190
....*....|....*....|....*....|....*...
gi 2194564643 499 SRVDlYVkvnqkypgyfdaVINaDDMDIAYQKLSELIR 536
Cdd:PRK00300 160 SEYD-YV------------IVN-DDLDTALEELKAIIR 183
|
|
| LRR_9 |
pfam14580 |
Leucine-rich repeat; |
174-308 |
2.76e-14 |
|
Leucine-rich repeat;
Pssm-ID: 405295 [Multi-domain] Cd Length: 175 Bit Score: 72.10 E-value: 2.76e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 174 NCISLTHLSLAGNKITTIKGLG-TL-PIKVLSLSNNMIETITGLEELKALQNLDLSHNQISSL-QGLENH-DLLEVINLE 249
Cdd:pfam14580 17 NPVRERELDLRGYKIPIIENLGaTLdQFDTIDFSDNEIRKLDGFPLLRRLKTLLLNNNRICRIgEGLGEAlPNLTELILT 96
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 2194564643 250 DNKIKELSEIEYIENLPILRVLNLLRNPIQTKPEYWFFVIYMLLRLTELDQQKIKVEEK 308
Cdd:pfam14580 97 NNNLQELGDLDPLASLKKLTFLSLLRNPVTNKPHYRLYVIYKVPQLRLLDFRKVKQKER 155
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
702-1178 |
6.94e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 77.29 E-value: 6.94e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 702 SPQPAPAPTLSPQPAPAPTLSPQpAPAPTLSPqpdqDKESGETkVAPSNPA----LSEPAQG------ADLASLSPQRVQ 771
Cdd:PHA03247 2491 AAGAAPDPGGGGPPDPDAPPAPS-RLAPAILP----DEPVGEP-VHPRMLTwirgLEELASDdagdppPPLPPAAPPAAP 2564
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 772 DEGTESANPAPRssthtlPEDPSHTEVEKPTGGSQRPLKEETPKAEVMRAGTPYPEIPPPQDsTTKVREQPGALLPRSRL 851
Cdd:PHA03247 2565 DRSVPPPRPAPR------PSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPD-THAPDPPPPSPSPAANE 2637
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 852 APTRLPQPQTLAPLQSRRPTPKLLSPSREealgtSSDQTPNPSPRSFPAQDGDPSKLPPISP--SQSKPPRNSSPPTAHS 929
Cdd:PHA03247 2638 PDPHPPPTVPPPERPRDDPAPGRVSRPRR-----ARRLGRAAQASSPPQRPRRRAARPTVGSltSLADPPPPPPTPEPAP 2712
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 930 PqqgqvgkASEVKLPLisPPVQEQAQQHTPNPPQEEEAPTV-QLPTIPAPSTEPQLPQNTEPRPASKPAREKKTPKVGRA 1008
Cdd:PHA03247 2713 H-------ALVSATPL--PPGPAAARQASPALPAAPAPPAVpAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRL 2783
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1009 SSKKVLDLQATPHSqGPTKQKGAKKKNLMQKETAKESPQQRKMPVGNSQTAPQLESHDKPTPRNESdpldfrSSPSHTEP 1088
Cdd:PHA03247 2784 TRPAVASLSESRES-LPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP------SLPLGGSV 2856
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1089 VPADPQnqeknhkahkpRKKAQTNPTPKDVAQSTHTSPNGEMSEGLPQGNET-ALGEDQPTREGQP--PQDPAKSAQEGS 1165
Cdd:PHA03247 2857 APGGDV-----------RRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESfALPPDQPERPPQPqaPPPPQPQPQPPP 2925
|
490
....*....|...
gi 2194564643 1166 APVLHPGEREQAQ 1178
Cdd:PHA03247 2926 PPQPQPPPPPPPR 2938
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
125-299 |
1.26e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 74.58 E-value: 1.26e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 125 TEQVYLNLNLSKVDFSSNLISEMYDLSAYHTLTQLILDNNEIEEITGLENCISLTHLSLAGNKITTIKGLGTLP-IKVLS 203
Cdd:COG4886 23 TLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTnLTELD 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 204 LSNNmietiTGLEELKALQNLDLSHNQISSL-QGLENHDLLEVINLEDNKIKELSeiEYIENLPILRVLNLLRNPIQTKP 282
Cdd:COG4886 103 LSGN-----EELSNLTNLESLDLSGNQLTDLpEELANLTNLKELDLSNNQLTDLP--EPLGNLTNLKSLDLSNNQLTDLP 175
|
170
....*....|....*..
gi 2194564643 283 EywffVIYMLLRLTELD 299
Cdd:COG4886 176 E----ELGNLTNLKELD 188
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
558-1050 |
3.05e-13 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 74.80 E-value: 3.05e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 558 SSKKTASGVPAHLVPSPRRLARLQADGQKTE--AFLEVQTQAV----VPENQDPTLPQSQELTEEGEPPEKETNVPQQVS 631
Cdd:pfam03154 65 SSKKIKEEAPSPLKSAKRQREKGASDTEEPEraTAKKSKTQEIsrpnSPSEGEGESSDGRSVNDEGSSDPKDIDQDNRST 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 632 SSALGIP-------------QQAQDLPPKVKEEDGQPANLPPKITTEMDGPEDEPGPPVPK-ADQSSTLASQEPPQQPAP 697
Cdd:pfam03154 145 SPSIPSPqdnesdsdssaqqQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSvPPQGSPATSQPPNQTQST 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 698 APTLS-------------PQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETkvAPSNPALSEPAQGADLAS 764
Cdd:pfam03154 225 AAPHTliqqtptlhpqrlPSPHPPLQPMTQPPPPSQVSPQPLPQPSLHGQMPPMPHSLQT--GPSHMQHPVPPQPFPLTP 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 765 LSPQRVQDEGTESANPAPRSSTHTLPedPSHTEVEKPTGGSQRPLKeetPKAEVMRAGTPYPEIPPPQDSTTKVREQPGA 844
Cdd:pfam03154 303 QSSQSQVPPGPSPAAPGQSQQRIHTP--PSQSQLQSQQPPREQPLP---PAPLSMPHIKPPPTTPIPQLPNPQSHKHPPH 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 845 LL-PRSRLAPTRLPQPQTLAPLQ--------SRRPTPKLLSP---------------SREEALGTSSDQTPN-------P 893
Cdd:pfam03154 378 LSgPSPFQMNSNLPPPPALKPLSslsthhppSAHPPPLQLMPqsqqlppppaqppvlTQSQSLPPPAASHPPtsglhqvP 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 894 SPRSFPAQDGDPSKLPPISPSqSKPPRNSSPPTAHSPQQGQVGKASEVKLPLIS----PPVQEQAQqhtpnPPQEEEAPT 969
Cdd:pfam03154 458 SQSPFPQHPFVPGGPPPITPP-SGPPTSTSSAMPGIQPPSSASVSSSGPVPAAVscplPPVQIKEE-----ALDEAEEPE 531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 970 VQLPTIPAPSTEPQLPQNtePRPASKPAREKKTPKVGRASSKKVlDLQATPHSqgptKQKGAKKKNLMQKETAKESPQQR 1049
Cdd:pfam03154 532 SPPPPPRSPSPEPTVVNT--PSHASQSARFYKHLDRGYNSCART-DLYFMPLA----GSKLAKKREEALEKAKREAEQKA 604
|
.
gi 2194564643 1050 K 1050
Cdd:pfam03154 605 R 605
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
659-998 |
3.64e-13 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 74.44 E-value: 3.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 659 PPKITTEMDGPEDEPGPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQD 738
Cdd:PHA03307 72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAAS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 739 KESGETKVAPSNPALSEPAQGADLASLSPQRVQDEGTESANPAPRSSTHTLPEDPS--HTEVEKPTGGSQ-RPLKEETPK 815
Cdd:PHA03307 152 PPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPrrSSPISASASSPApAPGRSAADD 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 816 AEVMRAGTPYPEIP----PPQDSTTKVREQPGALLPRSRLAPTRLPqPQTLAPLQSRRPTPKLLSPSREEalGTSSDQTP 891
Cdd:PHA03307 232 AGASSSDSSSSESSgcgwGPENECPLPRPAPITLPTRIWEASGWNG-PSSRPGPASSSSSPRERSPSPSP--SSPGSGPA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 892 NPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSPQQGqvGKASEVKLPLISPPVQEQAQQHTPNPPQEEEAPTVQ 971
Cdd:PHA03307 309 PSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRS--PSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPT 386
|
330 340
....*....|....*....|....*...
gi 2194564643 972 LPTIPAPSTEPQLPQN-TEPRPASKPAR 998
Cdd:PHA03307 387 RRRARAAVAGRARRRDaTGRFPAGRPRP 414
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
564-948 |
5.89e-13 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 74.05 E-value: 5.89e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 564 SGVPAHLVPSPRRLARLQADGQKTEAFLEVQTQAVVPENQDPTLPQSQELTEEGEPPEKETNVPQQVSSSALGIPQQAQD 643
Cdd:PHA03307 44 VSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPP 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 644 LPPKVKEEDGQPANLPPKITTEMDGPEDEPGPPVPKADQSSTLASqeppqQPAPAPTLSPQPAPAPTLSPQPAPAPTLSP 723
Cdd:PHA03307 124 ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAAS-----SRQAALPLSSPEETARAPSSPPAEPPPSTP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 724 QPAPAPTLSPQ--PDQDKESGETKVAPSNPAlSEPAQGADLASLSPQRVQDEGTESANPAPRSSTHTLP------EDPSH 795
Cdd:PHA03307 199 PAAASPRPPRRssPISASASSPAPAPGRSAA-DDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPtriweaSGWNG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 796 TEVEKPTGGSQRPLKEETPKAEVMRAGTPYPEiPPPQDSTTKVREQPGALLPRSRLAPTRLPQPQTLAPLQSRRPTPKLL 875
Cdd:PHA03307 278 PSSRPGPASSSSSPRERSPSPSPSSPGSGPAP-SSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRP 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 876 SPSREEAlGTSSDQTPNPSPRSFPAQDGDPSK-------LPPISPSQSKPPRNSSPPTAHSPQQGQVGKASEVKLPLISP 948
Cdd:PHA03307 357 PPPADPS-SPRKRPRPSRAPSSPAASAGRPTRrraraavAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTP 435
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
593-925 |
1.25e-11 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 69.43 E-value: 1.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 593 VQTQAVVPENQDPTLPQSQELTEEGEPPEKETNVPQQVSSSALGIPQQAQDLPPKVKEEDGQPANLPPkittemDGPEDE 672
Cdd:PHA03307 56 VAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPP------ASPPPS 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 673 PGPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTlSPQPDQDKESGETKVAPSNPA 752
Cdd:PHA03307 130 PAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPS-SPPAEPPPSTPPAAASPRPPR 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 753 LSEPA--------------------QGADLASLSPQRVQDEGTESANPAPRSSTHTLP------EDPSHTEVEKPTGGSQ 806
Cdd:PHA03307 209 RSSPIsasasspapapgrsaaddagASSSDSSSSESSGCGWGPENECPLPRPAPITLPtriweaSGWNGPSSRPGPASSS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 807 RPLKEETPKAEVMRAGTPYPEIPPPQ------------DSTTKVREQPGALLPRSRLAPTRLPQPQ-----TLAPLQSRR 869
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRAsssssssresssSSTSSSSESSRGAAVSPGPSPSRSPSPSrppppADPSSPRKR 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2194564643 870 PTPKLLSPSREEALGTSS--------------DQTPNPSPRSFP-----AQDGDPSKL----PPISPSQSKPPRNSSPP 925
Cdd:PHA03307 369 PRPSRAPSSPAASAGRPTrrraraavagrarrRDATGRFPAGRPrpsplDAGAASGAFyaryPLLTPSGEPWPGSPPPP 447
|
|
| gmk |
PRK14738 |
guanylate kinase; Provisional |
351-508 |
6.38e-11 |
|
guanylate kinase; Provisional
Pssm-ID: 237809 Cd Length: 206 Bit Score: 63.21 E-value: 6.38e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 351 APYPMLI-LTGPAACGKRELAHRLcRQFSTYFRYGACHTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFILTFNYGNHN 429
Cdd:PRK14738 10 PAKPLLVvISGPSGVGKDAVLARM-RERKLPFHFVVTATTRPKRPGEIDGVDYHFVTPEEFREMISQNELLEWAEVYGNY 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 430 YGLNRDTIegiaRDGLAS----CIHMELEGVRSLKYSYFEPRYILVVPMDKEKYEGYLRRKGLFSRAEIE--IAVSRVDL 503
Cdd:PRK14738 89 YGVPKAPV----RQALASgrdvIVKVDVQGAASIKRLVPEAVFIFLAPPSMDELTRRLELRRTESPEELErrLATAPLEL 164
|
170
....*....|..
gi 2194564643 504 -------YVKVN 508
Cdd:PRK14738 165 eqlpefdYVVVN 176
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
618-999 |
4.28e-10 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 64.24 E-value: 4.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 618 EPPEKETNVPQQVSSSALGIPQQAQDLPPkvkeedgqPANLPPKITTEMDGPEDEPGPPVPKADQSSTLASQEPPQQPAP 697
Cdd:PRK07764 379 ERLERRLGVAGGAGAPAAAAPSAAAAAPA--------AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPA 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 698 APTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPdqdkESGETKVAPSNPALSEPAQGADlaslSPQRVQDEGTES 777
Cdd:PRK07764 451 GGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAP----APAAAPAAPAAPAAPAGADDAA----TLRERWPEILAA 522
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 778 ANPAPRSSTHTLPEDPSHTEVEK-------PTGGSQRPLKEetPK-AEVMR-----------------------AGTPYP 826
Cdd:PRK07764 523 VPKRSRKTWAILLPEATVLGVRGdtlvlgfSTGGLARRFAS--PGnAEVLVtalaeelggdwqveavvgpapgaAGGEGP 600
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 827 EIPPPQDSTTKVREQPGALLPRSRLAPTRLPQPQTLAPlQSRRPTPKLLSPSREEALGTSSDQTPNPSPRSFPAQDGDPS 906
Cdd:PRK07764 601 PAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAE-ASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPA 679
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 907 KLPPisPSQSKPPRNSSPPTAHSPQQGQVgkASEVKLPLISPPVQEQAQQHTPNPPQEEEAPTVQLPTIPAPSTEP---- 982
Cdd:PRK07764 680 APPP--APAPAAPAAPAGAAPAQPAPAPA--ATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPagap 755
|
410
....*....|....*...
gi 2194564643 983 -QLPQNTEPRPASKPARE 999
Cdd:PRK07764 756 aQPPPPPAPAPAAAPAAA 773
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
570-957 |
5.07e-10 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 64.32 E-value: 5.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 570 LVPSPRRLARLQADGQKTEAFLEVQTQAVvPENQDPTL----PQSQELTEEGEPPEKETN-VPQQvsssALGIPQQAqdl 644
Cdd:PHA03378 416 IVTDPSVIKAIEEEHRKKKAARTEQPRAT-PHSQAPTVvlhrPPTQPLEGPTGPLSVQAPlEPWQ----PLPHPQVT--- 487
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 645 PPKVKEEDGQPANLPPKITTEMDGPED-----------EPGPPVPKADQSST--------LASQEPPQQPAPAPTLSPQP 705
Cdd:PHA03378 488 PVILHQPPAQGVQAHGSMLDLLEKDDEdmeqrvmatllPPSPPQPRAGRRAPcvytedldIESDEPASTEPVHDQLLPAP 567
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 706 APAPtLSPQPAPAPTLS------PQPAPAPTLSPQPDQDKESGETKVAPsnPALSEPAQGADLASLSPQRVQDEGTESAN 779
Cdd:PHA03378 568 GLGP-LQIQPLTSPTTSqlassaPSYAQTPWPVPHPSQTPEPPTTQSHI--PETSAPRQWPMPLRPIPMRPLRMQPITFN 644
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 780 PAPRSSTHTLPEDPSHTEVEKPTGGSQRPLKEETPKAEVMRAGTPYP-EIPPPQDSTTKVREQPGALLPRSR--LAPTRL 856
Cdd:PHA03378 645 VLVFPTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPgTMQPPPRAPTPMRPPAAPPGRAQRpaAATGRA 724
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 857 PQPQTlAPLQSRRPTPKLlSPSREEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSPQQGQVG 936
Cdd:PHA03378 725 RPPAA-APGRARPPAAAP-GRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQA 802
|
410 420
....*....|....*....|.
gi 2194564643 937 KASEVKLPLISPPVQEQAQQH 957
Cdd:PHA03378 803 GPTSMQLMPRAAPGQQGPTKQ 823
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
846-1169 |
6.93e-10 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 63.78 E-value: 6.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 846 LPRSRLAPTRLPQPQTLAPLQSrrpTPKLLSPSREEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSP- 924
Cdd:pfam05109 448 LPSSTHVPTNLTAPASTGPTVS---TADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPt 524
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 925 -------PTAHSPQQGQVGKASEVKlplisppvqeqaqqhTPNPPQEEEAPTVQLPTIPApsTEPQLPQNTEPRPASKPA 997
Cdd:pfam05109 525 pavttptPNATSPTLGKTSPTSAVT---------------TPTPNATSPTPAVTTPTPNA--TIPTLGKTSPTSAVTTPT 587
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 998 REKKTPKVGRASSKKvldlQATPHSQGPTKQKGAKKKNLMQKETAKESPQQRKMPVGNSQTAPQLESHDKPTPRNESD-- 1075
Cdd:pfam05109 588 PNATSPTVGETSPQA----NTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDns 663
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1076 ----PLDFRSSPSHTEPVP-ADPQNQEKNHkahkprkKAQTNPTPKDVAQSTHTSPNGEMSEGLPqgNETALGEDQPTRE 1150
Cdd:pfam05109 664 tshmPLLTSAHPTGGENITqVTPASTSTHH-------VSTSSPAPRPGTTSQASGPGNSSTSTKP--GEVNVTKGTPPKN 734
|
330
....*....|....*....
gi 2194564643 1151 GQPPQDPakSAQEGSAPVL 1169
Cdd:pfam05109 735 ATSPQAP--SGQKTAVPTV 751
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
637-1107 |
8.36e-09 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 60.09 E-value: 8.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 637 IPQQAQDLPPkVKEEDGQPANLPPKittemdGPEDEPGPPVPKADQSSTLASQEPPQQPAPAPT-LSPQPAPAPTLSPQP 715
Cdd:PTZ00449 489 IKKSKKKLAP-IEEEDSDKHDEPPE------GPEASGLPPKAPGDKEGEEGEHEDSKESDEPKEgGKPGETKEGEVGKKP 561
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 716 APAPtlSPQPAPAPTLSPQPDQDKESGETKvAPSNPAlsepaqgadlaslSPQRVQDEGTESANPAP-RSSTHTLPEDPS 794
Cdd:PTZ00449 562 GPAK--EHKPSKIPTLSKKPEFPKDPKHPK-DPEEPK-------------KPKRPRSAQRPTRPKSPkLPELLDIPKSPK 625
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 795 HTEVEKPTG---GSQRPLKEETPKAEVMRAGTPYPEIP-PPQDSTTKVREQPGALLPRSRLAPTRlpqpqtlaplqsrrp 870
Cdd:PTZ00449 626 RPESPKSPKrppPPQRPSSPERPEGPKIIKSPKPPKSPkPPFDPKFKEKFYDDYLDAAAKSKETK--------------- 690
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 871 TPKLLSPSREEALGTSSDQTPNPsprSFPAQDGDPSKLPPISPSQSKPPRNsspPTAHSPQQGQvgkasevklpLISPPV 950
Cdd:PTZ00449 691 TTVVLDESFESILKETLPETPGT---PFTTPRPLPPKLPRDEEFPFEPIGD---PDAEQPDDIE----------FFTPPE 754
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 951 QEQAQQHTPNPPQEEEAPTVQLPTIPAPSTEPQLPQNTEPRPASKPAREKKTPKVGRASSKK----------VLDLQATP 1020
Cdd:PTZ00449 755 EERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPPGDHPSLPKKrhrldglalsTTDLESDA 834
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1021 ------HSQGPTKQKGAKK-KNLMQKETAKE-SPQQRKMPVGNSQTAPQLESHDKPTPRNESDPLdfRSSPshtepvPAD 1092
Cdd:PTZ00449 835 griakdASGKIVKLKRSKSfDDLTTVEEAEEmGAEARKIVVDDDGTEADDEDTHPPEEKHKSEVR--RRRP------PKK 906
|
490
....*....|....*
gi 2194564643 1093 PQNQEKNHKAHKPRK 1107
Cdd:PTZ00449 907 PSKPKKPSKPKKPKK 921
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
133-313 |
2.62e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 57.64 E-value: 2.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 133 NLSKVDFSSNLISEMYDLSAYHTLTQLILDNNEIEEITGLENCISLTHLSLAGNKITTIKG---LGTLPIKVLSLSNNMI 209
Cdd:COG4886 229 NLETLDLSNNQLTDLPELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLkelELLLGLNSLLLLLLLL 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 210 ETITGLEELKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIKELSEIEYIENLPILRVLNLLRNPIQTKPEYWFFVI 289
Cdd:COG4886 309 NLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLT 388
|
170 180
....*....|....*....|....
gi 2194564643 290 YMLLRLTELDQQKIKVEEKVFAVN 313
Cdd:COG4886 389 LLLLLLTTTAGVLLLTLALLDAVN 412
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
154-290 |
2.93e-08 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 57.88 E-value: 2.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 154 HTLTQLILDNNEIEE------ITGLENCISLTHLSLAGNKITT------IKGL-GTLPIKVLSLSNNMIET------ITG 214
Cdd:COG5238 264 TTVETLYLSGNQIGAegaialAKALQGNTTLTSLDLSVNRIGDegaialAEGLqGNKTLHTLNLAYNGIGAqgaialAKA 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 215 LEELKALQNLDLSHNQISS------LQGLENHDLLEVINLEDNKIKELSEIEYIENLPI--LRVLNLLRNPIQTKPEYWF 286
Cdd:COG5238 344 LQENTTLHSLDLSDNQIGDegaialAKYLEGNTTLRELNLGKNNIGKQGAEALIDALQTnrLHTLILDGNLIGAEAQQRL 423
|
....
gi 2194564643 287 FVIY 290
Cdd:COG5238 424 EQLL 427
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
139-299 |
4.39e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 57.25 E-value: 4.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 139 FSSNLISEMYDLSAYHTLTQLILDNNEIEEITGLENCISLTHLSLAGNKITTIKGLGTLPIKVLSLSNNMIETITGLEEL 218
Cdd:COG4886 16 LLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 219 KALQNLDLSHNQisSLQGLENhdlLEVINLEDNKIKELSeiEYIENLPILRVLNLLRNPIQTKPEywffVIYMLLRLTEL 298
Cdd:COG4886 96 TNLTELDLSGNE--ELSNLTN---LESLDLSGNQLTDLP--EELANLTNLKELDLSNNQLTDLPE----PLGNLTNLKSL 164
|
.
gi 2194564643 299 D 299
Cdd:COG4886 165 D 165
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
199-239 |
4.50e-08 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 50.32 E-value: 4.50e-08
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 2194564643 199 IKVLSLSNNMIETITGLEELKALQNLDLSHN-QISSLQGLEN 239
Cdd:pfam12799 3 LEVLDLSNNQITDIPPLAKLPNLETLDLSGNnKITDLSDLAN 44
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
702-1094 |
1.11e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 56.53 E-value: 1.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 702 SPQPAPAPTLSPQPAPAPTLSPQPAPAPTlsPQPDQDKESGETKVAPSNPALSEPAQgadlaslsPQRVQDEGTESANPA 781
Cdd:PRK07764 410 PAPAAAAPAAAAAPAPAAAPQPAPAPAPA--PAPPSPAGNAPAGGAPSPPPAAAPSA--------QPAPAPAAAPEPTAA 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 782 PRSSTHTLPEDPSHTEVEKPTGGSQRPLKEETPKAEvmragtpYPEIpppqdsTTKVREQP----GALLPRSRLAPtrlP 857
Cdd:PRK07764 480 PAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRER-------WPEI------LAAVPKRSrktwAILLPEATVLG---V 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 858 QPQTL------APLQSRRPTPK---LLSPSREEALGT----SSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSP 924
Cdd:PRK07764 544 RGDTLvlgfstGGLARRFASPGnaeVLVTALAEELGGdwqvEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAA 623
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 925 PTAHSPQQGQVGKASEVKLPLISPPVQEQAQQHTPNP-PQEEEAPTVQLPTIPAPSTEPQLPQNTEPRPASKPARekktp 1003
Cdd:PRK07764 624 PAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPdASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAP----- 698
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1004 kvgrasskkvlDLQATPHSQGPTKQKGAKKKNLMQKETAKESPQQrkmPVGNSQTAPQLESHDKPTPRNESDPLDFRSSP 1083
Cdd:PRK07764 699 -----------AQPAPAPAATPPAGQADDPAAQPPQAAQGASAPS---PAADDPVPLPPEPDDPPDPAGAPAQPPPPPAP 764
|
410
....*....|.
gi 2194564643 1084 SHTEPVPADPQ 1094
Cdd:PRK07764 765 APAAAPAAAPP 775
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
221-278 |
1.40e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.45 E-value: 1.40e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2194564643 221 LQNLDLSHNQISSL-----QGLENhdlLEVINLEDNKIKELSEIEyIENLPILRVLNLLRNPI 278
Cdd:pfam13855 3 LRSLDLSNNRLTSLddgafKGLSN---LKVLDLSNNLLTTLSPGA-FSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
126-278 |
1.72e-07 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 55.18 E-value: 1.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 126 EQVYLNLNLSKVDFSSNLISE--MYD----LSAYHTLTQLILDNNEIEE------ITGLENCISLTHLSLAGNKITtikg 193
Cdd:COG5238 202 EALTQNTTVTTLWLKRNPIGDegAEIlaeaLKGNKSLTTLDLSNNQIGDegvialAEALKNNTTVETLYLSGNQIG---- 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 194 lgtlpikvlslSNNMIETITGLEELKALQNLDLSHNQISS------LQGLENHDLLEVINLEDNKIKELSEIEYIENL-- 265
Cdd:COG5238 278 -----------AEGAIALAKALQGNTTLTSLDLSVNRIGDegaialAEGLQGNKTLHTLNLAYNGIGAQGAIALAKALqe 346
|
170
....*....|....
gi 2194564643 266 -PILRVLNLLRNPI 278
Cdd:COG5238 347 nTTLHSLDLSDNQI 360
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
806-1271 |
2.41e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.71 E-value: 2.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 806 QRPLKEETPKAEvmrAGTPYPEIPPPQDsttkvreqPGALLPRSRLAPTRLPQPQTLAPLQSRRPT-------------- 871
Cdd:PHA03247 2481 RRPAEARFPFAA---GAAPDPGGGGPPD--------PDAPPAPSRLAPAILPDEPVGEPVHPRMLTwirgleelasddag 2549
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 872 --PKLLSPSREEALGTSSDQTPNPSPR-SFPAQDGDPSKlpPISPSQSKPPRNSSPPTAHSPQQGQvgkasevklPLISP 948
Cdd:PHA03247 2550 dpPPPLPPAAPPAAPDRSVPPPRPAPRpSEPAVTSRARR--PDAPPQSARPRAPVDDRGDPRGPAP---------PSPLP 2618
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 949 PvqeqaQQHTPNPPQEEEAP---------TVQLPTIPAPSTEPQLPQNTEPRPASKPAR--------EKKTPKVGRASSK 1011
Cdd:PHA03247 2619 P-----DTHAPDPPPPSPSPaanepdphpPPTVPPPERPRDDPAPGRVSRPRRARRLGRaaqassppQRPRRRAARPTVG 2693
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1012 KVLDL------------------QATPHSQGPTKQKGAKKKNLMQKET-----------AKESPQQRKMPVGNSQTAPQL 1062
Cdd:PHA03247 2694 SLTSLadpppppptpepaphalvSATPLPPGPAAARQASPALPAAPAPpavpagpatpgGPARPARPPTTAGPPAPAPPA 2773
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1063 ESHDKPTPRNESDPLDFRSSPSHTEPVPADPQNQEKNHKAHKP-----RKKAQTNPTPKDVAQSTHTSPNGEMSEGLPQG 1137
Cdd:PHA03247 2774 APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAalppaASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLG 2853
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1138 NETALGEDQPTR--EGQPPQDPAKS----AQEGSAPVLHPGEREQAQKREKSQKREVAGKPEGEEIAAPSQLRVKETQAH 1211
Cdd:PHA03247 2854 GSVAPGGDVRRRppSRSPAAKPAAParppVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPP 2933
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2194564643 1212 RDTRENRQSYAQRHSILVSKQQSKEKRTRKNGGVAQDRSPA----APQNQVSEEDQGSRTGRLR 1271
Cdd:PHA03247 2934 PPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVprfrVPQPAPSREAPASSTPPLT 2997
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
606-1011 |
5.81e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 53.91 E-value: 5.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 606 TLPQSQELTEEGE-PPEKETNVPQQVSSSALGIPQQAQDLPPKVKEEDGQPANLPPKITTEMDGPEDEPGPPvPKADQSS 684
Cdd:COG5180 14 TVPIPPNAARPVLsPELWAAANNDAVSQGDRSALASSPTRPYARKIFEPLDIKLALGKPQLPSVAEPEAYLD-PAPPKSS 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 685 TLASQEPPQQPAPAPTLSPQPAPAPTLSP-QPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLA 763
Cdd:COG5180 93 PDTPEEQLGAPAGDLLVLPAAKTPELAAGaLPAPAAAAALPKAKVTREATSASAGVALAAALLQRSDPILAKDPDGDSAS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 764 SLSPQRvqdEGTESANPAPRSSTHTLPEDPSHTEVEKPTGGSQRPlKEETPKAEVMRAGT-PYPEIPPPQDSTTKVREQP 842
Cdd:COG5180 173 TLPPPA---EKLDKVLTEPRDALKDSPEKLDRPKVEVKDEAQEEP-PDLTGGADHPRPEAaSSPKVDPPSTSEARSRPAT 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 843 GALLPRSR-LAPTRLPQPQTLAPlqsrrpTPKLLSPSREEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRN 921
Cdd:COG5180 249 VDAQPEMRpPADAKERRRAAIGD------TPAAEPPGLPVLEAGSEPQSDAPEAETARPIDVKGVASAPPATRPVRPPGG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 922 SSPPTAhsPQQGQVGKAsevklPLISPPVQEQAQQhtpnPPQEEEAPTVQLPTIPAPSTEPQLPQNTEPRPASKPAREKK 1001
Cdd:COG5180 323 ARDPGT--PRPGQPTER-----PAGVPEAASDAGQ----PPSAYPPAEEAVPGKPLEQGAPRPGSSGGDGAPFQPPNGAP 391
|
410
....*....|
gi 2194564643 1002 TPKVGRASSK 1011
Cdd:COG5180 392 QPGLGRRGAP 401
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
543-996 |
7.70e-07 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 53.94 E-value: 7.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 543 ETAAKTLAPTAAGAPSSKKTASGVPAH-------LVPSPRRLARLQADGQKTEAFLEVQTQAVVPENQDPTLPQSQELTE 615
Cdd:PRK10263 367 QTGEPVIAPAPEGYPQQSQYAQPAVQYneplqqpVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 616 EGEPPEKETNVPQQVSSsalgiPQQAQDLPPKVKEEDGQPANLPPKITTEMDGPEDEPGPPVPKADQSSTLASQEPPQQP 695
Cdd:PRK10263 447 WQAEEQQSTFAPQSTYQ-----TEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRARERE 521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 696 APAPTLSPQPAPA----PTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKES---GETKVAPSNPALSEPAQGA-------- 760
Cdd:PRK10263 522 QLAAWYQPIPEPVkepePIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKAtlaTGAAATVAAPVFSLANSGGprpqvkeg 601
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 761 -----------------DLAS----LSPQRVQDEGTESANPAPRSSTHTLPEDpshtEVEKPtggSQRPLKEETPKAEVM 819
Cdd:PRK10263 602 igpqlprpkrirvptrrELASygikLPSQRAAEEKAREAQRNQYDSGDQYNDD----EIDAM---QQDELARQFAQTQQQ 674
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 820 RAGTPYPEIPP--PQDSTTKVREQPGALLPRSRLAPTRLPQPQTLAPLQ----SRRPTPKLLSPSREEALGTSS-DQTPN 892
Cdd:PRK10263 675 RYGEQYQHDVPvnAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSlddfEFSPMKALLDDGPHEPLFTPIvEPVQQ 754
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 893 PSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPtahsPQQGQVGKASEVKLPLISPPVQEQAQQHTPNPPQEEEAPTVQL 972
Cdd:PRK10263 755 PQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAP----QPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQY 830
|
490 500 510
....*....|....*....|....*....|..
gi 2194564643 973 -----PTIPAPS---TEPQLPQNTEPRPASKP 996
Cdd:PRK10263 831 qqpqqPVAPQPQdtlLHPLLMRNGDSRPLHKP 862
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
641-930 |
1.11e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 53.31 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 641 AQDLPPKVKEEDGQPANLPPKITTEMdGPEDEPGPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPT 720
Cdd:PRK07003 393 ASAVPAVTAVTGAAGAALAPKAAAAA-AATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPP 471
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 721 LSPQPAPAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSpqrVQDEGTESANPAPRSSthtlPEDPSHTEVEK 800
Cdd:PRK07003 472 ADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAAS---REDAPAAAAPPAPEAR----PPTPAAAAPAA 544
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 801 PTGGSQRPLkeetpkaEVMR-AGTpypeipppQDSTTKVREQPGALLPRSRLAPTRLPQPqtlAPLQSRRPTPKllspsr 879
Cdd:PRK07003 545 RAGGAAAAL-------DVLRnAGM--------RVSSDRGARAAAAAKPAAAPAAAPKPAA---PRVAVQVPTPR------ 600
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2194564643 880 eeALGTSSDQTPNPSPRSFPAQDGdpsklppispSQSKPPRNSSPPTAHSP 930
Cdd:PRK07003 601 --ARAATGDAPPNGAARAEQAAES----------RGAPPPWEDIPPDDYVP 639
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
718-1116 |
1.35e-06 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 52.65 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 718 APTLSPQPAPAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSPQRVQDEGTESANPAPRSSTHTLPEDPSHTE 797
Cdd:pfam17823 62 AATAAPAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAALPSEA 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 798 VEKPTGGSQRPLKEETPKAEVMRAGTPYPEIPPPQDSTTKVREQPGALLPRSRLAPTRLPQPQTLAPLqsrRPTPKLLSP 877
Cdd:pfam17823 142 FSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPA---RGISTAATA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 878 SREEALGTSSDQTPN--PSPRSFPAQDG--DPSKLPPISP-----SQSKPPRNSSPPTAHSPQqgqvgkasevklPLISP 948
Cdd:pfam17823 219 TGHPAAGTALAAVGNssPAAGTVTAAVGtvTPAALATLAAaagtvASAAGTINMGDPHARRLS------------PAKHM 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 949 PVQEQAQQHTPNPPQEEEAPTVQLPTipapstePQLPQNTEPRPASKPAREKKTPKVGRASSKKVLDLQATPHSQgptkq 1028
Cdd:pfam17823 287 PSDTMARNPAAPMGAQAQGPIIQVST-------DQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQ----- 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1029 kgakkknlmqketAKEsPQQRKMPVGNSQTAPQLEShdkPTPRNESDPLdfrsSPSHTEPVPADPQNQEKNHKAHKPrKK 1108
Cdd:pfam17823 355 -------------AKE-PSASPVPVLHTSMIPEVEA---TSPTTQPSPL----LPTQGAAGPGILLAPEQVATEATA-GT 412
|
....*...
gi 2194564643 1109 AQTNPTPK 1116
Cdd:pfam17823 413 ASAGPTPR 420
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
177-217 |
1.39e-06 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 46.08 E-value: 1.39e-06
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2194564643 177 SLTHLSLAGNKITTIKGLGTLP-IKVLSLS-NNMIETITGLEE 217
Cdd:pfam12799 2 NLEVLDLSNNQITDIPPLAKLPnLETLDLSgNNKITDLSDLAN 44
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
714-980 |
1.59e-06 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 52.62 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 714 QPAPAPTLSPQPAPAPTLSPQPDqdkesgetkvAPSNPALSEPAQGADLAS--LSPQRVQDEGTESANPAPRSSTHTLPE 791
Cdd:PLN03209 328 VPPKESDAADGPKPVPTKPVTPE----------APSPPIEEEPPQPKAVVPrpLSPYTAYEDLKPPTSPIPTPPSSSPAS 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 792 DPSHTEVEKPTGGSQRPLKEETPKAevmragtpyPEIPPPQDSTTKVReqpgALLPRSR---LAPTRLPQPQTLAPLQSR 868
Cdd:PLN03209 398 SKSVDAVAKPAEPDVVPSPGSASNV---------PEVEPAQVEAKKTR----PLSPYARyedLKPPTSPSPTAPTGVSPS 464
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 869 RPTPKLLSPSREEALGTSSDQTPNPSPrsfpaqdGDPSKLPPISPSQSKPPRNSSPPTAHSPQQGQVGKASEVKLPLISP 948
Cdd:PLN03209 465 VSSTSSVPAVPDTAPATAATDAAAPPP-------ANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAP 537
|
250 260 270
....*....|....*....|....*....|....*..
gi 2194564643 949 PVQEQAQQHTPNPPQEEEAP-----TVQLPTIPAPST 980
Cdd:PLN03209 538 PTALADEQHHAQPKPRPLSPytmyeDLKPPTSPTPSP 574
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
544-863 |
1.71e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 1.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 544 TAAKTLAPTAAGAPSSKKTASGVPAHLVPS------PRRLAR-----LQADGQKTEAFLEVQTQAVVPENQDPTLPQSQE 612
Cdd:PHA03247 2744 VPAGPATPGGPARPARPPTTAGPPAPAPPAapaagpPRRLTRpavasLSESRESLPSPWDPADPPAAVLAPAAALPPAAS 2823
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 613 LTEEGEPPEKETNVPQQVSS--SALGIPQQAQDLPPKVKEEDGQPANLPPKITTEMDGPEDE-PGPPVPKADQSSTLASQ 689
Cdd:PHA03247 2824 PAGPLPPPTSAQPTAPPPPPgpPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRlARPAVSRSTESFALPPD 2903
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 690 EPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTlsPQPAPAPTLSPQPDQDKESGETKVAPsNPALSEPAQGADLASlspqR 769
Cdd:PHA03247 2904 QPERPPQPQAPPPPQPQPQPPPPPQPQPPPP--PPPRPQPPLAPTTDPAGAGEPSGAVP-QPWLGALVPGRVAVP----R 2976
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 770 VQDEGTESANPAPRSSTHTLpedPSHTEVEKPTGGSQRPLKEETPKAEVMRAGTPYP---------EIPPPQDSTTKVRE 840
Cdd:PHA03247 2977 FRVPQPAPSREAPASSTPPL---TGHSLSRVSSWASSLALHEETDPPPVSLKQTLWPpddtedsdaDSLFDSDSERSDLE 3053
|
330 340
....*....|....*....|...
gi 2194564643 841 QPGALLPRSRLAPTRLPQPQTLA 863
Cdd:PHA03247 3054 ALDPLPPEPHDPFAHEPDPATPE 3076
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
133-278 |
1.78e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 51.59 E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 133 NLSKVDFSSNLISE-----MYDLSAYHTLTQLILDNNEIEEITGLENCISLTHLSLAgnkittikglgtlpIKVLSLSNN 207
Cdd:cd00116 82 GLQELDLSDNALGPdgcgvLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPA--------------LEKLVLGRN 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 208 MIE---TITGLEELKA---LQNLDLSHNQISS------LQGLENHDLLEVINLEDNKI-----KELSEIeyIENLPILRV 270
Cdd:cd00116 148 RLEgasCEALAKALRAnrdLKELNLANNGIGDagiralAEGLKANCNLEVLDLNNNGLtdegaSALAET--LASLKSLEV 225
|
....*...
gi 2194564643 271 LNLLRNPI 278
Cdd:cd00116 226 LNLGDNNL 233
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
605-930 |
1.87e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 52.38 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 605 PTLPQSQELTEEGEPPEKETNVPQQVSSSALGIPQQAqDLP--PKVKEEDGQPANLPPKitTEMDGPEDEPGPPVPKA-- 680
Cdd:PTZ00449 582 PKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELL-DIPksPKRPESPKSPKRPPPP--QRPSSPERPEGPKIIKSpk 658
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 681 ------------------DQSSTLASQEPPQQPAPAPTLSPQPAPAPTLsPQPAPAPTLSPQPAPaptlsPQPDQDKESg 742
Cdd:PTZ00449 659 ppkspkppfdpkfkekfyDDYLDAAAKSKETKTTVVLDESFESILKETL-PETPGTPFTTPRPLP-----PKLPRDEEF- 731
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 743 eTKVAPSNPALSEPAQGADLASLSPQRVQDEGTESANPAPRSSTHTLPEDPSHTEVEKPTGGSQRPlkeETPKAEVMRAG 822
Cdd:PTZ00449 732 -PFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMKRP---DSPSEHEDKPP 807
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 823 TPYPEIPPPQD-------STTKVREQPGALLPRSRLAPTRLPQPQTLAPLQSRRPTPKLLSPSREEAL---GTSSDQT-- 890
Cdd:PTZ00449 808 GDHPSLPKKRHrldglalSTTDLESDAGRIAKDASGKIVKLKRSKSFDDLTTVEEAEEMGAEARKIVVdddGTEADDEdt 887
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2194564643 891 -PNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSP 930
Cdd:PTZ00449 888 hPPEEKHKSEVRRRRPPKKPSKPKKPSKPKKPKKPDSAFIP 928
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
876-1159 |
2.65e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 52.00 E-value: 2.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 876 SPSREEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSPQQGQVGKASEVKLPLISPPVQEQAQ 955
Cdd:PTZ00449 540 SDEPKEGGKPGETKEGEVGKKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLD 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 956 qhTPNPPQEEEAPTVqlPTIPAPSTEPQLPQNTEPRPASKPAREKKTPKVGRASS--KKVLDlqatPHSQGPTKQKGAKK 1033
Cdd:PTZ00449 620 --IPKSPKRPESPKS--PKRPPPPQRPSSPERPEGPKIIKSPKPPKSPKPPFDPKfkEKFYD----DYLDAAAKSKETKT 691
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1034 KNLMQKETAKESPQQRKMPVGNSQTAPQLESHDKP-TPRNESDPLDFRSSPSHTEPVPADPQNQEKNHKAHKPRKKAQTN 1112
Cdd:PTZ00449 692 TVVLDESFESILKETLPETPGTPFTTPRPLPPKLPrDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPD 771
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2194564643 1113 PTPKDVAQSTHTSPNGEMSEGLPQGNETALGEDQPTreGQPPQDPAK 1159
Cdd:PTZ00449 772 ILAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPP--GDHPSLPKK 816
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
219-260 |
3.36e-06 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 44.93 E-value: 3.36e-06
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2194564643 219 KALQNLDLSHNQISSLQGLENHDLLEVINLEDN-KIKELSEIE 260
Cdd:pfam12799 1 PNLEVLDLSNNQITDIPPLAKLPNLETLDLSGNnKITDLSDLA 43
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
619-842 |
3.54e-06 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 51.61 E-value: 3.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 619 PPEKETNVPQQVSSSALGIPQQAQDLPPKVKEEDGQPANLPPK--ITTEMDGPEDEPGPPVPKADQSSTLASQEPPQQPA 696
Cdd:PHA03378 705 RPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPaaAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPP 784
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 697 PAPTlSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSPQrvqdegte 776
Cdd:PHA03378 785 APQQ-RPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAAAGPT-------- 855
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 777 sanPAPRSST--HTLPEDPSHTEVEKPT-----GGSQRPLKEET-PKAEVM-----RAGTPYP--EIPPPQDSTTKVREQ 841
Cdd:PHA03378 856 ---PSPGSGTsdKIVQAPVFYPPVLQPIqvmrqLGSVRAAAASTvTQAPTEytgerRGVGPMHptDIPPSKRAKTDAYVE 932
|
.
gi 2194564643 842 P 842
Cdd:PHA03378 933 S 933
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
671-815 |
4.18e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 51.02 E-value: 4.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 671 DEPGPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVAPSN 750
Cdd:PRK07994 369 EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASR 448
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2194564643 751 PALSEPAQgADLASLSPQRVQDEGTESANPAPRSSThTLPEDPSHTEVEKPTGGSQRPLKEETPK 815
Cdd:PRK07994 449 ARPVNSAL-ERLASVRPAPSALEKAPAKKEAYRWKA-TNPVEVKKEPVATPKALKKALEHEKTPE 511
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
702-1005 |
4.77e-06 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 50.92 E-value: 4.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 702 SPQP-APAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSPQRV------QDEG 774
Cdd:NF033839 161 TPQPeNPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIvalikeLDEL 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 775 TESANPAPRS-STHTLPEDPSH---TEVEKPTGGSQRPLKEETPKAEvmraGTPYPEIPPPQDSTTKVREQPGALLPRSR 850
Cdd:NF033839 241 KKQALSEIDNvNTKVEIENTVHkifADMDAVVTKFKKGLTQDTPKEP----GNKKPSAPKPGMQPSPQPEKKEVKPEPET 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 851 LAPTRLPQPQTlaPLQSRRPTPKLLSPSREEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSP 930
Cdd:NF033839 317 PKPEVKPQLEK--PKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKP 394
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2194564643 931 QqgqvgkasevklplisPPVQEQAQQHTPNPPQEEEAPTVQLPTIPAPSTEPQLPQNTEPRPASKPAREKKTPKV 1005
Cdd:NF033839 395 K----------------PEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEV 453
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
700-1217 |
5.42e-06 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 51.24 E-value: 5.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 700 TLSPQPAPAPTLSPQPAPaPTLSPQPAPA-PTLSPQPDQDKESGETKVAPSnpalsepaqgadlaslspqrvqdegTESA 778
Cdd:PRK10263 327 TTATQSWAAPVEPVTQTP-PVASVDVPPAqPTVAWQPVPGPQTGEPVIAPA-------------------------PEGY 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 779 NPAPRsstHTLPEDPSHTEVEKPTGGSQRPLKEETPKAEVMRAGTPYPEIPPPQDSTTKVREQPGALLPRSRLAPTRLPQ 858
Cdd:PRK10263 381 PQQSQ---YAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFA 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 859 PQTLAPLQSRRPTPKLLSPSREEALGTSSDQTPNPSPRsfpAQDGDPSKLP-----------------------PI-SPS 914
Cdd:PRK10263 458 PQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV---VEETKPARPPlyyfeeveekrarereqlaawyqPIpEPV 534
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 915 QSKPPRNSSPPTAHSPQQGQVGKASEVKlplispPVQEQAQQHT--PNPPQEEEAPTVQLPTIPAPSTE------PQLPQ 986
Cdd:PRK10263 535 KEPEPIKSSLKAPSVAAVPPVEAAAAVS------PLASGVKKATlaTGAAATVAAPVFSLANSGGPRPQvkegigPQLPR 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 987 ntePRPASKPAREK------KTPKvGRASSKKVLDLQATPHSQGpTKQKGAKKKNLMQKETAKESPQQRKMPVGNSQtap 1060
Cdd:PRK10263 609 ---PKRIRVPTRRElasygiKLPS-QRAAEEKAREAQRNQYDSG-DQYNDDEIDAMQQDELARQFAQTQQQRYGEQY--- 680
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1061 qleSHDKPTPRNESDpldfrsSPSHTEPVPADPQNQEKNHKAHKPrkkAQTNP--------TP-KDVAQSTHTSP---NG 1128
Cdd:PRK10263 681 ---QHDVPVNAEDAD------AAAEAELARQFAQTQQQRYSGEQP---AGANPfslddfefSPmKALLDDGPHEPlftPI 748
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1129 EMSEGLPQGNETALGEDQ-------PTREGQPPQDPAKSAQEGSAPVLHPGEREQAQKREKSQKREVAGKPEGEEIAAPS 1201
Cdd:PRK10263 749 VEPVQQPQQPVAPQQQYQqpqqpvaPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQP 828
|
570
....*....|....*.
gi 2194564643 1202 QLRVKETQAHRDTREN 1217
Cdd:PRK10263 829 QYQQPQQPVAPQPQDT 844
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
668-996 |
7.21e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 50.62 E-value: 7.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 668 GPEDEPGPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAptLSPQPAPAPTLSPQPDQDKESGETKVA 747
Cdd:PRK07003 367 APGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAA--AAATRAEAPPAAPAPPATADRGDDAAD 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 748 PSNPAlsePAQGADLASLSPQRVQDEGTESANPAPRSSTHTLPEDPSHTEVEKPTGGSQRPLKEETPKAEVMrAGTPYPE 827
Cdd:PRK07003 445 GDAPV---PAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAP-AAASRED 520
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 828 IPPPQDSttkvreqpgallPRSRLAPtrlPQPQTLAPLQSRRPTPKLLSPSREEALGTSSDQTPNPSPRSFPAQdgdpsk 907
Cdd:PRK07003 521 APAAAAP------------PAPEARP---PTPAAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAA------ 579
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 908 lPPISPSQSKPPRNSSP-PTAHSPQQGQVGKASEvklpliSPPVQEQAQQHTPNPPQEEEAPTVQLP------------- 973
Cdd:PRK07003 580 -APAAAPKPAAPRVAVQvPTPRARAATGDAPPNG------AARAEQAAESRGAPPPWEDIPPDDYVPlsadegfggpddg 652
|
330 340 350
....*....|....*....|....*....|....*.
gi 2194564643 974 -------------TIPAPSTEPQLPQNTEPRPASKP 996
Cdd:PRK07003 653 fvpvfdsgpddvrVAPKPADAPAPPVDTRPLPPAIP 688
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
155-231 |
7.90e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.44 E-value: 7.90e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2194564643 155 TLTQLILDNNEIEEITG--LENCISLTHLSLAGNKITTIkglgtlpikvlslSNNMietitgLEELKALQNLDLSHNQI 231
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDgaFKGLSNLKVLDLSNNLLTTL-------------SPGA------FSGLPSLRYLDLSGNRL 61
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
801-998 |
8.67e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 50.26 E-value: 8.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 801 PTGGSQRPLKEETPKAEVMRAGTPYPEIPPPqdsTTKVREQPGALLPRSRLAPTRL-PQPQTLAPLQSRRPtpkllspsr 879
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPA---APAAAPAAAAAARAVAAAPARRsPAPEALAAARQASA--------- 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 880 eEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSPQQGQVGKASEVKLPLISPPVQEQAQQHTP 959
Cdd:PRK12323 442 -RGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAG 520
|
170 180 190
....*....|....*....|....*....|....*....
gi 2194564643 960 NPPQEEEAPTVQLPTIPAPSTEPQLPQNTEPRPASKPAR 998
Cdd:PRK12323 521 WVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEP 559
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
659-935 |
1.03e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 49.91 E-value: 1.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 659 PPKITTEMDGPEDEPGPPvpkadqSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAP--TLSPQPD 736
Cdd:pfam05109 432 PTLNTTGFAAPNTTTGLP------SSTHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDngTESKAPD 505
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 737 QDKESGETKVAPSN-----PALSEPAQGA---DLASLSPQRVQDEGTESA--------NPAPRSSTHTLPEDPSHTEVEK 800
Cdd:pfam05109 506 MTSPTSAVTTPTPNatsptPAVTTPTPNAtspTLGKTSPTSAVTTPTPNAtsptpavtTPTPNATIPTLGKTSPTSAVTT 585
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 801 PTGGSQRP-LKEETPKAEVMR---AGTPYPEI--PPPQDSTTKVREQPGALLPRSRLAPTRLPQ--PQTLAPLQSRRPT- 871
Cdd:pfam05109 586 PTPNATSPtVGETSPQANTTNhtlGGTSSTPVvtSPPKNATSAVTTGQHNITSSSTSSMSLRPSsiSETLSPSTSDNSTs 665
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 872 --PKLLS--PSREEAL--------GTSSDQTPNPSPR-------SFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSPQQ 932
Cdd:pfam05109 666 hmPLLTSahPTGGENItqvtpastSTHHVSTSSPAPRpgttsqaSGPGNSSTSTKPGEVNVTKGTPPKNATSPQAPSGQK 745
|
...
gi 2194564643 933 GQV 935
Cdd:pfam05109 746 TAV 748
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
156-194 |
1.12e-05 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 43.39 E-value: 1.12e-05
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2194564643 156 LTQLILDNNEIEEITGLENCISLTHLSLAGN-KITTIKGL 194
Cdd:pfam12799 3 LEVLDLSNNQITDIPPLAKLPNLETLDLSGNnKITDLSDL 42
|
|
| gmk |
PRK14737 |
guanylate kinase; Provisional |
355-535 |
1.87e-05 |
|
guanylate kinase; Provisional
Pssm-ID: 173199 Cd Length: 186 Bit Score: 46.91 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 355 MLILTGPAACGKRELAHRLCRQFSTYFRYGAChTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFILTFNYGNHNYGLNR 434
Cdd:PRK14737 6 LFIISSVAGGGKSTIIQALLEEHPDFLFSISC-TTRAPRPGDEEGKTYFFLTIEEFKKGIADGEFLEWAEVHDNYYGTPK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 435 DTIEGIARDGLASCIHMELEGVRSLKYSYFEPRY-ILVVPMDKEKYEGYLRRKGLFSRAEIEiavSRVDLYVKVNQKYPG 513
Cdd:PRK14737 85 AFIEDAFKEGRSAIMDIDVQGAKIIKEKFPERIVtIFIEPPSEEEWEERLIHRGTDSEESIE---KRIENGIIELDEANE 161
|
170 180
....*....|....*....|..
gi 2194564643 514 yFDAVINADDMDIAYQKLSELI 535
Cdd:PRK14737 162 -FDYKIINDDLEDAIADLEAII 182
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
676-932 |
2.05e-05 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 48.88 E-value: 2.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 676 PVPKADQSSTLASQEPPQQPAPAPTLSPQPA-PAPT-----LSPQPAP-----------APTLSPQPAPAPTLSPQPDQD 738
Cdd:pfam09770 107 PAARAAQSSAQPPASSLPQYQYASQQSQQPSkPVRTgyekyKEPEPIPdlqvdaslwgvAPKKAAAPAPAPQPAAQPASL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 739 KESGEtKVapsnpalsepaqgadlasLSPQRVQDEGTESANPAPRSSTHTLPEDPSHTEVEKPTGGSQRPLKEETPKAEV 818
Cdd:pfam09770 187 PAPSR-KM------------------MSLEEVEAAMRAQAKKPAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQ 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 819 MRAGTPYPEIPPPQDSTTKVREQPGALLPRSRLAPTRLPQPQTLAPLQSRRPTPKLLSPSREEALGTSSDQTPNPSPRSF 898
Cdd:pfam09770 248 QQPQQPQQHPGQGHPVTILQRPQSPQPDPAQPSIQPQAQQFHQQPPPVPVQPTQILQNPNRLSAARVGYPQNPQPGVQPA 327
|
250 260 270
....*....|....*....|....*....|....
gi 2194564643 899 PAQDGDPSklppiSPSQSKPPrnssPPTAHsPQQ 932
Cdd:pfam09770 328 PAHQAHRQ-----QGSFGRQA----PIITH-PQQ 351
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
705-943 |
2.12e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 2.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 705 PAPAPTL---------SPQPAPAPTLSPQPA-PAPTLSPQPD----QDKESGETKVAPSNPALSEPAQGADLASlspqrV 770
Cdd:PHA03247 255 PAPPPVVgegadrapeTARGATGPPPPPEAAaPNGAAAPPDGvwgaALAGAPLALPAPPDPPPPAPAGDAEEED-----D 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 771 QDEGTESANPAPRSSTHTlpedpshtevekPTGGSQRPLKEETPKAEV--MRAGTPYPEIPPPqdSTTKVREQPGALLPR 848
Cdd:PHA03247 330 EDGAMEVVSPLPRPRQHY------------PLGFPKRRRPTWTPPSSLedLSAGRHHPKRASL--PTRKRRSARHAATPF 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 849 SRlAPTRLPQPQTLAPLQSRRPTPKllspsreealgtssdQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAH 928
Cdd:PHA03247 396 AR-GPGGDDQTRPAAPVPASVPTPA---------------PTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPAT 459
|
250
....*....|....*
gi 2194564643 929 SPQQGQVGKASEVKL 943
Cdd:PHA03247 460 EPAPDDPDDATRKAL 474
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
668-871 |
2.18e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 48.72 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 668 GPEDEPGPPV--PKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETK 745
Cdd:PRK12323 369 GGGAGPATAAaaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 746 VAPSNPAlSEPAQGADLASLSPQRVQDEGTES-ANPAPRSSTHTLPEDPSHTEVEKPTGGSQRPLKEETPKAEVMRAGTP 824
Cdd:PRK12323 449 APAPAPA-AAPAAAARPAAAGPRPVAAAAAAApARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIP 527
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2194564643 825 YPEIPPPQDSTTKVREQP-GALLPRSRLAPTRLPQPQTLAPLQSRRPT 871
Cdd:PRK12323 528 DPATADPDDAFETLAPAPaAAPAPRAAAATEPVVAPRPPRASASGLPD 575
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
616-835 |
2.45e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.83 E-value: 2.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 616 EGEPPEKETNVPQQVSSSAlGIPQQAQDLPPKVKEEDGQPANLPPKITTEMDGPEDEPGPPvpkADQSSTLASQEPPQQP 695
Cdd:PRK07764 598 EGPPAPASSGPPEEAARPA-APAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHV---AVPDASDGGDGWPAKA 673
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 696 APAPTLSPQPAPAPTLSPQPAPAPtlSPQPAPAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSPQRVQDEGT 775
Cdd:PRK07764 674 GGAAPAAPPPAPAPAAPAAPAGAA--PAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDP 751
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 776 ESANPAPrssthtlpedPSHTEVEKPTGGSQRPLKEETPKAEVMRAgtpyPEIPPPQDST 835
Cdd:PRK07764 752 AGAPAQP----------PPPPAPAPAAAPAAAPPPSPPSEEEEMAE----DDAPSMDDED 797
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
752-1005 |
2.58e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 2.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 752 ALSEPAQGaDLASLSPQRVQDEGTESANPAPRSST-HTLPEDPSHTEVE-KPTGGSQRPLKEETPKAEvmragtPYPEIP 829
Cdd:PHA03247 243 VISHPLRG-DIAAPAPPPVVGEGADRAPETARGATgPPPPPEAAAPNGAaAPPDGVWGAALAGAPLAL------PAPPDP 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 830 PPQDSTTKVREQPGALLPRSRLAPtrLPQPQTLAPLQ-SRRPTPKLLSPSREEALgTSSDQTPNPSPRSFPAQDGDPSKL 908
Cdd:PHA03247 316 PPPAPAGDAEEEDDEDGAMEVVSP--LPRPRQHYPLGfPKRRRPTWTPPSSLEDL-SAGRHHPKRASLPTRKRRSARHAA 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 909 PPIS--PSQSKPPRNSSPPTAHSPQQGqvgkasevklpliSPPVQEQAQQHTPNPPQEEEAPTvqlPTIPAPSTEPQLPq 986
Cdd:PHA03247 393 TPFArgPGGDDQTRPAAPVPASVPTPA-------------PTPVPASAPPPPATPLPSAEPGS---DDGPAPPPERQPP- 455
|
250
....*....|....*....
gi 2194564643 987 nTEPRPASKPAREKKTPKV 1005
Cdd:PHA03247 456 -APATEPAPDDPDDATRKA 473
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
156-283 |
3.45e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 48.15 E-value: 3.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 156 LTQLILDNNEIEEITglENC-ISLTHLSLAGNKITTIKGlgTLP--IKVLSLS-NNMIETITGLEElkALQNLDLSHNQI 231
Cdd:PRK15370 201 ITTLILDNNELKSLP--ENLqGNIKTLYANSNQLTSIPA--TLPdtIQEMELSiNRITELPERLPS--ALQSLDLFHNKI 274
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2194564643 232 SSLQglEN-HDLLEVINLEDNKIKELSeieyiENLPI-LRVLNLLRNPIQTKPE 283
Cdd:PRK15370 275 SCLP--ENlPEELRYLSVYDNSIRTLP-----AHLPSgITHLNVQSNSLTALPE 321
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
662-930 |
7.51e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 7.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 662 ITTEMDGPEDEPGPPV---PKADQSSTLASQEPPQqpapaptlSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPqpdqd 738
Cdd:PHA03247 244 ISHPLRGDIAAPAPPPvvgEGADRAPETARGATGP--------PPPPEAAAPNGAAAPPDGVWGAALAGAPLALP----- 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 739 kesgetkvAPSNPALSEPAQGADLASlspqrVQDEGTESANPAPRSSTHTlpedpshtevekPTGGSQRPLKEETPKAEV 818
Cdd:PHA03247 311 --------APPDPPPPAPAGDAEEED-----DEDGAMEVVSPLPRPRQHY------------PLGFPKRRRPTWTPPSSL 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 819 --MRAGTPYPEIPPPqdSTTKVREQPGALLPRSRlAPTRLPQPQTLAPLQSRRPTpkllsPSREEALGTSSDQTPNPSPR 896
Cdd:PHA03247 366 edLSAGRHHPKRASL--PTRKRRSARHAATPFAR-GPGGDDQTRPAAPVPASVPT-----PAPTPVPASAPPPPATPLPS 437
|
250 260 270
....*....|....*....|....*....|....
gi 2194564643 897 SFPAQDGDPSklppiSPSQSKPPRNSSPPTAHSP 930
Cdd:PHA03247 438 AEPGSDDGPA-----PPPERQPPAPATEPAPDDP 466
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
542-785 |
9.19e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 46.49 E-value: 9.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 542 TETAAKTLAP--------TAAGAPSSKKTASGVPaHLVPSPRRLArlQADGQKTEAFL-----EVQTQAVVPENQDPTLP 608
Cdd:pfam17823 199 ASSAPATLTPargistaaTATGHPAAGTALAAVG-NSSPAAGTVT--AAVGTVTPAALatlaaAAGTVASAAGTINMGDP 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 609 QSQELTeegepPEKETnvPQQVSSSALGIPQQAQDLPPKVKEEDGQPA-NLPPKITTEMDGPEDEPGPPVPKADQSSTLA 687
Cdd:pfam17823 276 HARRLS-----PAKHM--PSDTMARNPAAPMGAQAQGPIIQVSTDQPVhNTAGEPTPSPSNTTLEPNTPKSVASTNLAVV 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 688 sqeppqqpapapTLSPQPAPAPTLSPQPAPAPTLSPQ-PAPAPTLSPQPdqdkesgetkvapsnpalSEPAQGADLAS-- 764
Cdd:pfam17823 349 ------------TTTKAQAKEPSASPVPVLHTSMIPEvEATSPTTQPSP------------------LLPTQGAAGPGil 398
|
250 260
....*....|....*....|....
gi 2194564643 765 LSPQRVQDE---GTESANPAPRSS 785
Cdd:pfam17823 399 LAPEQVATEataGTASAGPTPRSS 422
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
537-753 |
9.24e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.79 E-value: 9.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 537 EYLGLTETAAKTLA------------PTAAGAPSSKKT-ASGVPAHLVPSPRRLARLQADGQKTEAFLEVQTQAVVPENQ 603
Cdd:PRK12323 349 EYAGFTMTLLRMLAfrpgqsgggagpATAAAAPVAQPApAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSP 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 604 DPTLPQSQELTEEGEPPEKETNVPQQVSSSALGIPQQAQDL---------PPKVKEEDGQPANLPPKITTEMDGPEDEPG 674
Cdd:PRK12323 429 APEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPrpvaaaaaaAPARAAPAAAPAPADDDPPPWEELPPEFAS 508
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2194564643 675 PPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTlspQPDQDKESGETKVAPSNPAL 753
Cdd:PRK12323 509 PAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPR---PPRASASGLPDMFDGDWPAL 584
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
884-1260 |
9.85e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 9.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 884 GTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSPQQGQVGKASEVKLPLISPPVQEQAQQHTPnPPQ 963
Cdd:PRK07764 389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSA-QPA 467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 964 EEEAPTVQLPTIPAPSTEPQLPQNTEPRPASKPA-----------REK------KTPKVGRASSKKVLDlQATPHS-QGP 1025
Cdd:PRK07764 468 PAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAapagaddaatlRERwpeilaAVPKRSRKTWAILLP-EATVLGvRGD 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1026 TKQKGAKKKNLMQKETAKESPQqrkmpvgNSQTAPQLESHDKPTPRNESDPLDFRSSPSHTEPVPADPQNQEKNHKAHKP 1105
Cdd:PRK07764 547 TLVLGFSTGGLARRFASPGNAE-------VLVTALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPA 619
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1106 RKKAQTNPTPKDVAQ-STHTSPNGEMSEGLPQGNETALGEDQPTREGQPPQDPAKSAQeGSAPVLHPGEREQAQKREKSQ 1184
Cdd:PRK07764 620 APAAPAAPAPAGAAAaPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAA-PAAPPPAPAPAAPAAPAGAAP 698
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2194564643 1185 KREVAgKPEGEEIAAPSQLRVKETQAHRDTRENRQSYAQRHSILVSKQQSKEKRTRKNGGVAQDRSPAAPQNQVSE 1260
Cdd:PRK07764 699 AQPAP-APAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAA 773
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
200-253 |
9.95e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.36 E-value: 9.95e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2194564643 200 KVLSLSNNMIETITG--LEELKALQNLDLSHNQISSL-----QGLENhdlLEVINLEDNKI 253
Cdd:pfam13855 4 RSLDLSNNRLTSLDDgaFKGLSNLKVLDLSNNLLTTLspgafSGLPS---LRYLDLSGNRL 61
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
902-1040 |
1.43e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 46.31 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 902 DGDPSKLP--PISP--SQSKPPRNSSPPTAHSPQQGQVGKASevklpliSPPVQEQAQQHTPNPPQEEEAPTVQLPTIPa 977
Cdd:PRK14971 368 DASGGRGPkqHIKPvfTQPAAAPQPSAAAAASPSPSQSSAAA-------QPSAPQSATQPAGTPPTVSVDPPAAVPVNP- 439
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2194564643 978 PSTEPQlpqntEPRPASKPARekKTPKVGRASSKKVLDLQATPHSQGPTKQKGAKKKNLMQKE 1040
Cdd:PRK14971 440 PSTAPQ-----AVRPAQFKEE--KKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQKE 495
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
702-902 |
1.57e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.13 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 702 SPQPAPAPTLSPQPAPAPTLSPQPAPAPTlSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSP-QRVQDEGTESANP 780
Cdd:PRK07764 598 EGPPAPASSGPPEEAARPAAPAAPAAPAA-PAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAsDGGDGWPAKAGGA 676
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 781 APRSSTHTLPEDPSHTevekPTGGSQRPLKEETPKAEVMRAGTPYPEIPPPQDSTTkvREQPGALLPRSRLAPTRLPQPQ 860
Cdd:PRK07764 677 APAAPPPAPAPAAPAA----PAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGA--SAPSPAADDPVPLPPEPDDPPD 750
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2194564643 861 TLAPLQSRRPTPkllSPSREEAlgtsSDQTPNPSPRSFPAQD 902
Cdd:PRK07764 751 PAGAPAQPPPPP---APAPAAA----PAAAPPPSPPSEEEEM 785
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
805-1180 |
2.01e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.93 E-value: 2.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 805 SQRPLKEETPKAEVMRAGTPYPEIPPPQDSTTKVREQPGALLPRSRLAPTRLPQPQTLAPLQSRRPTPKLLSPSREEAlg 884
Cdd:PHA03307 21 FPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPA-- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 885 tSSDQTPNPSPrsfpaqdGDPSKLPPisPSQSKPPRN--SSPPTAHSPQQGQVGKASevklpliSPPVQEQAQQHTPNPP 962
Cdd:PHA03307 99 -SPAREGSPTP-------PGPSSPDP--PPPTPPPASppPSPAPDLSEMLRPVGSPG-------PPPAASPPAAGASPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 963 QEEEAPTVQLPTIPAPSTE----------PQLPQNTEPRPASKPAREKKTPKVGRASSK-----KVLDLQATPHSQGPTK 1027
Cdd:PHA03307 162 VASDAASSRQAALPLSSPEetarapssppAEPPPSTPPAAASPRPPRRSSPISASASSPapapgRSAADDAGASSSDSSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1028 QKGAKKKNLMQKETAKESPQQRKMPVGNSQTAPQLESHDKPTPRNESDPldfrSSPSHTEPVPADPQNQEknhKAHKPRK 1107
Cdd:PHA03307 242 SESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSS----PRERSPSPSPSSPGSGP---APSSPRA 314
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2194564643 1108 KAQTNPTPKDVAQSTHTSPNGEMSEGLPQGNETA----LGEDQPTREGQPPQDPAKSAQEGSAPVLHPGEREQAQKR 1180
Cdd:PHA03307 315 SSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSrspsPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRAR 391
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
703-877 |
2.05e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 45.27 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 703 PQPAPAPTLSPQPAPAPTLSPQPAPAPTLspQPDQDKESGETKVAPSNPALSEPAQGADLAS---------LSPQRVQDE 773
Cdd:TIGR00601 89 ATPTSAPTPTPSPPASPASGMSAAPASAV--EEKSPSEESATATAPESPSTSVPSSGSDAAStlvvgsereTTIEEIMEM 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 774 G--TESANPAPRSSTHT-----------LPEDPSHTEVEKPTGGSQRPLKEETPKAEVMRAGTPYPEiPPPQDSTTKVRE 840
Cdd:TIGR00601 167 GyeREEVERALRAAFNNpdraveylltgIPEDPEQPEPVQQTAASTAAATTETPQHGSVFEQAAQGG-TEQPATEAAQGG 245
|
170 180 190
....*....|....*....|....*....|....*..
gi 2194564643 841 QPGALLprsrlaptrLPQPQTLAPLQSRRPTPKLLSP 877
Cdd:TIGR00601 246 NPLEFL---------RNQPQFQQLRQVVQQNPQLLPP 273
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
132-191 |
2.27e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 44.01 E-value: 2.27e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2194564643 132 LNLSKvdfssNLISEMYDLSAYHTLTQLILDNNEIEEITGLE----NCISLTHLSLAGNKITTI 191
Cdd:cd21340 125 LNISG-----NNIDSLEPLAPLRNLEQLDASNNQISDLEELLdllsSWPSLRELDLTGNPVCKK 183
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
899-1008 |
2.28e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 44.22 E-value: 2.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 899 PAQDGDPSKLPPISPSQSKPPrnssPPTAHSPQQGQVGKASEVKLPLISPPVQEQAQQHtpnPPQEEEAPTVQLPTIPAP 978
Cdd:PRK11633 47 PGDRDEPDMMPAATQALPTQP----PEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEP---APVEPPKPKPVEKPKPKP 119
|
90 100 110
....*....|....*....|....*....|
gi 2194564643 979 STEPQLPQNTEPRPASKPAREKKTPKVGRA 1008
Cdd:PRK11633 120 KPQQKVEAPPAPKPEPKPVVEEKAAPTGKA 149
|
|
| TALPID3 |
pfam15324 |
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ... |
662-890 |
2.41e-04 |
|
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.
Pssm-ID: 434634 [Multi-domain] Cd Length: 1288 Bit Score: 45.65 E-value: 2.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 662 ITTEMDGPEDEPGPPVPKADQSSTLASQEPPQQPAPAptlSPQPAPaptlsPQPAPAPTLSPQPAPAPTLSPQPDQDKES 741
Cdd:pfam15324 953 TIAIMLGDREAQREPPVAASVPGDLPTKETLLPTPVP---TPQPTP-----PCSPPSPLKEPSPVKTPDSSPCVSEHDFF 1024
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 742 GETKVAPSNPALSEPAQG-----ADLASLSPQRVqdegtesANPAPRSSTHTLPEDPSHT-EVEKPTGGSQRPLKEETPK 815
Cdd:pfam15324 1025 PVKEIPPEKGADTGPAVSlvitpTVTPIATPPPA-------ATPTPPLSENSIDKLKSPSpELPKPWEDSDLPLEEENPN 1097
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2194564643 816 aevmragTPYPEIPPPQDSTTKVR-EQPGALLPRSrlaPTRLPQPQTLAPLQSRRPTPKLLSPSREEALGTSSDQT 890
Cdd:pfam15324 1098 -------SEQEELHPRAVVMSVARdEEPESVVLPA---SPPEPKPLAPPPLGAAPPSPPQSPSSSSSTLESSSSLT 1163
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
531-793 |
2.66e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 2.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 531 LSELIREYLGLTETAAKTLAPTAAGAPSSKKTASGVPahlvPSPRRLARLQADGQkteaflevqtqavvPENQDPTLPQS 610
Cdd:PRK07764 570 LVTALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASS----GPPEEAARPAAPAA--------------PAAPAAPAPAG 631
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 611 QElteeGEPPEKETNVPQQVSSSALgiPQQAQDLPPKVKEEDGQPANLPPkittemDGPEDEPGPPVPKADQSSTLASQe 690
Cdd:PRK07764 632 AA----AAPAEASAAPAPGVAAPEH--HPKHVAVPDASDGGDGWPAKAGG------AAPAAPPPAPAPAAPAAPAGAAP- 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 691 PPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSPQRV 770
Cdd:PRK07764 699 AQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSP 778
|
250 260
....*....|....*....|...
gi 2194564643 771 QDEGTESANPAPRSSTHTLPEDP 793
Cdd:PRK07764 779 PSEEEEMAEDDAPSMDDEDRRDA 801
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
654-794 |
2.73e-04 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 45.10 E-value: 2.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 654 QPANLPpkiTTEM--DGPEDEPGPPVPKADQSSTlaSQEPPQQPAPAPTLSPQPAPAPTLS----PQPAPAP----TLSP 723
Cdd:PHA03269 22 LNTNIP---IPELhtSAATQKPDPAPAPHQAASR--APDPAVAPTSAASRKPDLAQAPTPAasekFDPAPAPhqaaSRAP 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2194564643 724 QPAPAPTL--SPQPDqdkesgeTKVAPSNPALSEPAQGadlaslspqrvqDEGTESANPAPRSSTHTLPEDPS 794
Cdd:PHA03269 97 DPAVAPQLaaAPKPD-------AAEAFTSAAQAHEAPA------------DAGTSAASKKPDPAAHTQHSPPP 150
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
852-1078 |
3.49e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.84 E-value: 3.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 852 APTRLPQPQTLAPLQSRRPTPKLLSPSR--------EEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSS 923
Cdd:PRK07003 405 AAGAALAPKAAAAAAATRAEAPPAAPAPpatadrgdDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDA 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 924 PPTAHSPQQGQVGKASEVKLPLISPPVqeqaqqhTPNPPQEEEAPTVQLPtiPAPSTEPQLPqnTEPRPASKPAREKKTP 1003
Cdd:PRK07003 485 PPDAAFEPAPRAAAPSAATPAAVPDAR-------APAAASREDAPAAAAP--PAPEARPPTP--AAAAPAARAGGAAAAL 553
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1004 KVGRASSKKV-------LDLQATPHSQGPTKQKGAKKKNLMQKETAKESPQQRKMPVGNSQTAPQLESHDKPTPRNESDP 1076
Cdd:PRK07003 554 DVLRNAGMRVssdrgarAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPPPWEDIP 633
|
..
gi 2194564643 1077 LD 1078
Cdd:PRK07003 634 PD 635
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
705-989 |
4.06e-04 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 44.60 E-value: 4.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 705 PAPAPTLSPQPAPAPTLSPQPAPAPTL-----SPQPDQDKESGETKVAPSNPALSEPAQGADLASLSP----QRVQDEGT 775
Cdd:PHA03369 354 TAPSRVLAAAAKVAVIAAPQTHTGPADrqrpqRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPqspgTSYGPEPV 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 776 ESANPAPrSSTHTLPEDPSH---TEVEKPTGGSQRPLKEETPKAEVMRAGTPYPEIPPPQDSTTKVREQPGALLPRSRLA 852
Cdd:PHA03369 434 GPVPPQP-TNPYVMPISMANmvyPGHPQEHGHERKRKRGGELKEELIETLKLVKKLKEEQESLAKELEATAHKSEIKKIA 512
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 853 PTRLP--QPQTLAPLQSRRPTPKLLSPsreeALGTSSDQTPN--PSPRSFPAQdgdPSKLPPISPSQSKPPRNSSPPTAH 928
Cdd:PHA03369 513 ESEFKnaGAKTAAANIEPNCSADAAAP----ATKRARPETKTelEAVVRFPYQ---IRNMESPAFVHSFTSTTLAAAAGQ 585
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2194564643 929 SPQQGQV--GKASEVK-----------LPLISPPVQEQAQQHTPNPPQEEEAPTvqlPTIPAPSTEPQLPQNTE 989
Cdd:PHA03369 586 GSDTAEAlaGAIETLLtqasaqpaglsLPAPAVPVNASTPASTPPPLAPQEPPQ---PGTSAPSLETSLPQQKP 656
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
847-996 |
4.68e-04 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 44.64 E-value: 4.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 847 PRSRLAPTRLPQPQTlAPLQSRRPTPKLLSPSR-EEAL---GTSSDQTPNPSPRSFPA----------QDGDPSKLPPIS 912
Cdd:pfam09770 167 PKKAAAPAPAPQPAA-QPASLPAPSRKMMSLEEvEAAMraqAKKPAQQPAPAPAQPPAappaqqaqqqQQFPPQIQQQQQ 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 913 PSQSKPPRNSSPPTAHSPQ--QGQVGKASEVKLPLISPPVQEQAQQHTPNPPQ---------EEEAPTVQLPTIPAPSTE 981
Cdd:pfam09770 246 PQQQPQQPQQHPGQGHPVTilQRPQSPQPDPAQPSIQPQAQQFHQQPPPVPVQptqilqnpnRLSAARVGYPQNPQPGVQ 325
|
170
....*....|....*
gi 2194564643 982 PQLPQNTEPRPASKP 996
Cdd:pfam09770 326 PAPAHQAHRQQGSFG 340
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
617-824 |
5.42e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 5.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 617 GEPPEKETNVPQQVSSSALGIPQQAQdlPPKVKEEDGQPANLPPKITTEMDGPEDEPGPPVPKADQSSTLAS-QEPPQQP 695
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAA--PAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASaRGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 696 APAPTLSPQPAPA---PTLSPQPAPAPTLSPQP--APAPTLSPQPDQDKESGETKVAPSNPALSEPAQGadlaslSPQRV 770
Cdd:PRK12323 449 APAPAPAAAPAAAarpAAAGPRPVAAAAAAAPAraAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAA------PAGWV 522
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2194564643 771 QDEGTESANPAPRSSTHTLPEDPSHTEVEKPTGGSQRPLKEETPKAEvmRAGTP 824
Cdd:PRK12323 523 AESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRAS--ASGLP 574
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
705-1003 |
7.06e-04 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 43.83 E-value: 7.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 705 PAPAPTLSP-QPAPAPTLSP--QPAPAPTLSPQPDQDKESGETKVAPSNPalSEPAQGAdlaslSPQRVqdegtESANPA 781
Cdd:PHA03369 372 PQTHTGPADrQRPQRPDGIPysVPARSPMTAYPPVPQFCGDPGLVSPYNP--QSPGTSY-----GPEPV-----GPVPPQ 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 782 PrSSTHTLPEDPSH---TEVEKPTGGSQRPLKEETPKAEVMRAGTPYPEIPPPQDSTTKVREQPGALLPRSRLAPTRLP- 857
Cdd:PHA03369 440 P-TNPYVMPISMANmvyPGHPQEHGHERKRKRGGELKEELIETLKLVKKLKEEQESLAKELEATAHKSEIKKIAESEFKn 518
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 858 -QPQTLAPLQSRRPTPKLLSPsreeALGTSSDQTPN--PSPRSFPAQdgdPSKLPPISPSQSKpprnssPPTAHSPQQGQ 934
Cdd:PHA03369 519 aGAKTAAANIEPNCSADAAAP----ATKRARPETKTelEAVVRFPYQ---IRNMESPAFVHSF------TSTTLAAAAGQ 585
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2194564643 935 VGKASEVklplISPPVQEQAQQHTPNP-PQEEEAPTVQL-PTIPAPSTEPQLPQNTEPRPASKPAREKKTP 1003
Cdd:PHA03369 586 GSDTAEA----LAGAIETLLTQASAQPaGLSLPAPAVPVnASTPASTPPPLAPQEPPQPGTSAPSLETSLP 652
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
814-998 |
8.19e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 43.92 E-value: 8.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 814 PKAEVMRAGTPYPEIPPPQDSTTKVREQPGALLPRSR--LAPTRLPQPQTLAPLQSrrPTPKLLSPSREEAlgtsSDQTP 891
Cdd:PRK10263 319 PVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQptVAWQPVPGPQTGEPVIA--PAPEGYPQQSQYA----QPAVQ 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 892 NPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSPQQGQVGKASEVKLPLISPPVQEQAQQHTP--NPPQEEEAPT 969
Cdd:PRK10263 393 YNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQStyQTEQTYQQPA 472
|
170 180 190
....*....|....*....|....*....|..
gi 2194564643 970 VQLPTIPAPSTEPQlPQNTEPRPA---SKPAR 998
Cdd:PRK10263 473 AQEPLYQQPQPVEQ-QPVVEPEPVveeTKPAR 503
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
680-789 |
9.47e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 43.09 E-value: 9.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 680 ADQSSTLASQEPPQQ----PAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQpdqdkesGETKVAPSNPALSE 755
Cdd:PRK10856 147 ADQSSAELSQNSGQSvpldTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQ-------QNAVVAPSQANVDT 219
|
90 100 110
....*....|....*....|....*....|....*
gi 2194564643 756 PAQGADLASLSPQRVQDEGTESANPA-PRSSTHTL 789
Cdd:PRK10856 220 AATPAPAAPATPDGAAPLPTDQAGVStPAADPNAL 254
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
677-1062 |
9.95e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 43.56 E-value: 9.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 677 VPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPT-LSPQPAPAPTLSPQPAPAPTL---SPQPDQDKESGETKVAPSNPA 752
Cdd:PRK14949 376 LPEGQTPSALAAAVQAPHANEPQFVNAAPAEKKTaLTEQTTAQQQVQAANAEAVAEadaSAEPADTVEQALDDESELLAA 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 753 L-SEPA--------QG---ADLASLSPQRVQDEGTESANPA-PRSSTHTLPEDPSHTEVEKPTGGSQ--RPLKEETPKAE 817
Cdd:PRK14949 456 LnAEQAvilsqaqsQGfeaSSSLDADNSAVPEQIDSTAEQSvVNPSVTDTQVDDTSASNNSAADNTVddNYSAEDTLESN 535
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 818 VMRAGtPYPEIPPPQDS------TTKVREQPGA------LLPRSRLAPTRLPQPQTLAPLQSRRPTPKLLSP-------- 877
Cdd:PRK14949 536 GLDEG-DYAQDSAPLDAyqddyvAFSSESYNALsddeqhSANVQSAQSAAEAQPSSQSLSPISAVTTAAASLadddilda 614
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 878 ---SREEAL-GTSSDQTpnpsprsfpaQDGDPSKL----PPISPSQSKPPRNSSPPTAHSPQQgqvGKASEVKLPLISPP 949
Cdd:PRK14949 615 vlaARDSLLsDLDALSP----------KEGDGKKSsadrKPKTPPSRAPPASLSKPASSPDAS---QTSASFDLDPDFEL 681
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 950 VQEQAQQHTPNPPQEEEAPTVQLPTIPAPSTEPQLPQNTEPRPASKPAREKKTPKVGRA--SSKKVLDLQATPHSQGPTK 1027
Cdd:PRK14949 682 ATHQSVPEAALASGSAPAPPPVPDPYDRPPWEEAPEVASANDGPNNAAEGNLSESVEDAsnSELQAVEQQATHQPQVQAE 761
|
410 420 430
....*....|....*....|....*....|....*
gi 2194564643 1028 QkgakkknlmQKETAKESPQQRKMPVgnSQTAPQL 1062
Cdd:PRK14949 762 A---------QSPASTTALTQTSSEV--QDTELNL 785
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
782-1166 |
9.96e-04 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 43.41 E-value: 9.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 782 PRSSTHTLPEDPSHTEVEK--PTGGSQRPLKEETPKAE---VMRAGTPYPEIPPPQDSTTKvrEQPGALLPRSRLAPTRL 856
Cdd:pfam17823 14 PLSESHAAPADPRHFVLNKmwNGAGKQNASGDAVPRADnksSEQ*NFCAATAAPAPVTLTK--GTSAAHLNSTEVTAEHT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 857 PQPQTLAPLQSRRPTPKLLSPSreeALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPprnsSPPTAHSPQqgqVG 936
Cdd:pfam17823 92 PHGTDLSEPATREGAADGAASR---ALAAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAAC----RANASAAPR---AA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 937 KASEVKLPLISPPVQEQAQQHTPNPPQEEEAPTVQLPTIPAPST---------------EPQLPQNTEPRPASKPAREKK 1001
Cdd:pfam17823 162 IAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATltpargistaatatgHPAAGTALAAVGNSSPAAGTV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1002 TPKVGRASSKKVLDLQA---------------TPHSQGPTKQKGAKKKNLMQKETAKESPQQRKMPVGNSQTAPQLESHD 1066
Cdd:pfam17823 242 TAAVGTVTPAALATLAAaagtvasaagtinmgDPHARRLSPAKHMPSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTAG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1067 KPTPrnesdpldfrsSPSHTEPVPADPQNQEKNHKAHKPRKKAQTNPTPKDVAQSTHTSPNGEMSEGLPQGNETALGEDQ 1146
Cdd:pfam17823 322 EPTP-----------SPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQ 390
|
410 420
....*....|....*....|
gi 2194564643 1147 PTREGQPPQDPAKSAQEGSA 1166
Cdd:pfam17823 391 GAAGPGILLAPEQVATEATA 410
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
703-930 |
1.00e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.33 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 703 PQPAPAPTLSPQPAPAPTLSPQPAPAPtlspqpdqdkesgetkvAPSNPALSEPAQGADLASLSPQRVQDEGTESANPAP 782
Cdd:PRK12323 381 PVAQPAPAAAAPAAAAPAPAAPPAAPA-----------------AAPAAAAAARAVAAAPARRSPAPEALAAARQASARG 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 783 RSSTHTLPEDPSHTEVekptgGSQRPlkeetPKAEVMRAGTPYPEIPPPQDSTTKVREQPGALLPRSRLAPT-RLPQPQT 861
Cdd:PRK12323 444 PGGAPAPAPAPAAAPA-----AAARP-----AAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEfASPAPAQ 513
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2194564643 862 LAPLQSRRPTPKLLSPSREEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSP 930
Cdd:PRK12323 514 PDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWP 582
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
702-843 |
1.06e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 702 SPQPAPAPTLSP--QPAPAPTLSPQPAPAPTLSPQPdqdkeSGETKVAPSNPALSEPAQGADLASLSPqrvqdEGTESAN 779
Cdd:PRK14951 372 AAAPAEKKTPARpeAAAPAAAPVAQAAAAPAPAAAP-----AAAASAPAAPPAAAPPAPVAAPAAAAP-----AAAPAAA 441
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2194564643 780 PAPRSsthtLPEDPSHTEVEKPtggSQRPLKEETPKAEVMRAGTPypeiPPPQDSTTKVREQPG 843
Cdd:PRK14951 442 PAAVA----LAPAPPAQAAPET---VAIPVRVAPEPAVASAAPAP----AAAPAAARLTPTEEG 494
|
|
| PRK11901 |
PRK11901 |
hypothetical protein; Reviewed |
885-1039 |
1.32e-03 |
|
hypothetical protein; Reviewed
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 42.36 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 885 TSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSPQQgQVGKASEVKLPLISPPVQEQAQQHTPNPPQE 964
Cdd:PRK11901 88 SSGNQSSPSAANNTSDGHDASGVKNTAPPQDISAPPISPTPTQAAPPQ-TPNGQQRIELPGNISDALSQQQGQVNAASQN 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 965 EEAPTVQLPTIPAP-----STEPQLPQNTEPRPASKPAREKKTPKVGRASSKKVldlqaTPHSQgPTKQKGAKKKNLMQK 1039
Cdd:PRK11901 167 AQGNTSTLPTAPATvapskGAKVPATAETHPTPPQKPATKKPAVNHHKTATVAV-----PPATS-GKPKSGAASARALSS 240
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
672-797 |
1.36e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.78 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 672 EPGPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPtlSPQPAPAPTLSPQPDQDKESGETKVAPSNP 751
Cdd:PRK14951 370 AEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAP--PAAAPPAPVAAPAAAAPAAAPAAAPAAVAL 447
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2194564643 752 ALSEPAQGADLASLSPQRVQDEgTESANPAPRSSTHTLPEDPSHTE 797
Cdd:PRK14951 448 APAPPAQAAPETVAIPVRVAPE-PAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
583-741 |
1.37e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 43.18 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 583 DGQKTEA----FLEVQTQAVVPENQDPTLPQSQELTEEGEPPEKETNVPQQVSSSALGIPQQAQDLPPKVKEEDGQPANL 658
Cdd:PRK14949 635 DGKKSSAdrkpKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDRPPWEE 714
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 659 PPkittemdgpEDEPGPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLspqpaPAPTLSPQPAPAPTLSPQPDQD 738
Cdd:PRK14949 715 AP---------EVASANDGPNNAAEGNLSESVEDASNSELQAVEQQATHQPQV-----QAEAQSPASTTALTQTSSEVQD 780
|
...
gi 2194564643 739 KES 741
Cdd:PRK14949 781 TEL 783
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
910-1068 |
1.37e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 910 PISPSQSKPPRNSSPPTAHSPQQgqvgkasevklplISPPVQEQAQQHTPNPPQEEEAPTVQLPTIPAPSTEPQLPQnte 989
Cdd:PRK07994 368 PEVPPQSAAPAASAQATAAPTAA-------------VAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQR--- 431
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2194564643 990 PRPASKPAREKKTPKVGRASSKKVLDLQATPHSQGPTKQKGAKKKNLMQKETAKESPQQRKMPVGNSQTAPQLESHDKP 1068
Cdd:PRK07994 432 AQGATKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
700-872 |
1.43e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 43.15 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 700 TLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSPQRVQDEGTESAN 779
Cdd:PRK10263 746 TPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVA 825
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 780 PAPRSSTHTLPEDPSHTE-VEKP---TGGSQRPLKEETPKAEVMRAGTPYPEIPPPQDSTtkvreqpgALLPRSRLAPTR 855
Cdd:PRK10263 826 PQPQYQQPQQPVAPQPQDtLLHPllmRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTF--------ALEQMARLVEAR 897
|
170
....*....|....*..
gi 2194564643 856 LPQPQTLAPLQSRRPTP 872
Cdd:PRK10263 898 LADFRIKADVVNYSPGP 914
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
535-790 |
1.54e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 43.13 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 535 IREYLGLTETAAKTLAPTAAGAPSSKKTASGVPAhlvpSPRRLARLQADGQKTEAFLEVQTQAVVPENQDPTLPQSQELT 614
Cdd:PHA03378 574 IQPLTSPTTSQLASSAPSYAQTPWPVPHPSQTPE----PPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFP 649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 615 EEGEPPEKETNVPQQVSSSALGIPQQ------AQDLPPKVKEEDGQPanlPPKITTEMDGPEDEPGPPVPKAdqsstlAS 688
Cdd:PHA03378 650 TPHQPPQVEITPYKPTWTQIGHIPYQpsptgaNTMLPIQWAPGTMQP---PPRAPTPMRPPAAPPGRAQRPA------AA 720
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 689 QEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPdqdkesgetKVAPSNPALSEPAQGADLASLSPQ 768
Cdd:PHA03378 721 TGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPP---------AAAPGAPTPQPPPQAPPAPQQRPR 791
|
250 260
....*....|....*....|..
gi 2194564643 769 rvqdegtesANPAPRSSTHTLP 790
Cdd:PHA03378 792 ---------GAPTPQPPPQAGP 804
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
662-926 |
2.01e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.45 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 662 ITTEMDGPEDEPGPPVPKAD---QSSTLASQEPPQQPAPAPTLSPQP-APAPTLSPQP-APAPTLSPQP-APAPTLSPQP 735
Cdd:NF033839 279 LTQDTPKEPGNKKPSAPKPGmqpSPQPEKKEVKPEPETPKPEVKPQLeKPKPEVKPQPeKPKPEVKPQLeTPKPEVKPQP 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 736 DQDKEsgETKVAPSNPALSEPAQGAdlaslSPQRVQDEGTESANPAPRSSTHT-LPEDPSHTEVEKPTGGSQRplkeETP 814
Cdd:NF033839 359 EKPKP--EVKPQPEKPKPEVKPQPE-----TPKPEVKPQPEKPKPEVKPQPEKpKPEVKPQPEKPKPEVKPQP----EKP 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 815 KAEVM-RAGTPYPEIPP-PQDSTTKVREQPGALLPRSRlaptrlPQPQTLAPLQSRRPTPKLLSPSREEALGTSSDQTPN 892
Cdd:NF033839 428 KPEVKpQPEKPKPEVKPqPEKPKPEVKPQPETPKPEVK------PQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNN 501
|
250 260 270
....*....|....*....|....*....|....
gi 2194564643 893 PSprsfpaQDGDPSKLPPISPSQSKPPRNSSPPT 926
Cdd:NF033839 502 LS------KDKQPSNQASTNEKATNKPKKSLPST 529
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
599-786 |
2.11e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 42.39 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 599 VPENQDPTLPQSQELTEEG-----EP-PEKETNVPQQVSSSALGIPQQAQDLPPKVKEE--DGQPANLPPKITTEMDGPE 670
Cdd:PRK08691 371 VIENTELQSPSAQTAEKETaakkpQPrPEAETAQTPVQTASAAAMPSEGKTAGPVSNQEnnDVPPWEDAPDEAQTAAGTA 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 671 DEPGPPVPKADQSSTLA-SQEPPQQPAPAPTLSPQpapapTLSPQPAPAPTlSPQPAPAPTLS---------------PQ 734
Cdd:PRK08691 451 QTSAKSIQTASEAETPPeNQVSKNKAADNETDAPL-----SEVPSENPIQA-TPNDEAVETETfaheapaepfygygfPD 524
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2194564643 735 PDQDKESGETKVAP--SNPALSEPAQGADLASLSPQRVQDEGTESAnPAPRSST 786
Cdd:PRK08691 525 NDCPPEDGAEIPPPdwEHAAPADTAGGGADEEAEAGGIGGNNTPSA-PPPEFST 577
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
133-232 |
2.27e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 42.53 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 133 NLSKVDFSSNLISEMY--DLSAYHTLTQLILDNNEIE-EITG-LENCISLTHLSLAGNKITtikglGTLPikvlslsnnm 208
Cdd:PLN00113 476 RLENLDLSRNQFSGAVprKLGSLSELMQLKLSENKLSgEIPDeLSSCKKLVSLDLSHNQLS-----GQIP---------- 540
|
90 100
....*....|....*....|....
gi 2194564643 209 ietiTGLEELKALQNLDLSHNQIS 232
Cdd:PLN00113 541 ----ASFSEMPVLSQLDLSQNQLS 560
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
720-931 |
2.65e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 720 TLSPQPAPAPTLSPQPDQDKESGETKVAPSNPAlsEPAQGADLASLSPQRVQDEGTESANPAPRSSTHTlPEDPSHTEVE 799
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEEAARPAAPA--APAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHH-PKHVAVPDAS 663
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 800 KPTGGSQRPLKEETPKAEVMRAGTPYPEIPPPQdsttkvreqpgallPRSRLAPTRLPQPQTLAPLQSRRPTPKLLSPSR 879
Cdd:PRK07764 664 DGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGA--------------APAQPAPAPAATPPAGQADDPAAQPPQAAQGAS 729
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2194564643 880 EEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRNSSPPTAHSPQ 931
Cdd:PRK07764 730 APSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSE 781
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
708-1171 |
2.92e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.98 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 708 APTLSPQPAPAPtlspqPAPAPTLSPQPDQdKESGETkVAPSNPALSEPAQGADLASLSPQRVQDEGTESANpAPRSSTH 787
Cdd:PHA03378 436 ARTEQPRATPHS-----QAPTVVLHRPPTQ-PLEGPT-GPLSVQAPLEPWQPLPHPQVTPVILHQPPAQGVQ-AHGSMLD 507
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 788 TLPEDPSHTEvekptggsQRPLKEETPKAEVM-RAGTPYPEIPPpQDSTTKVREQPGALLPRSRLAPTRLPQPQTLAPLQ 866
Cdd:PHA03378 508 LLEKDDEDME--------QRVMATLLPPSPPQpRAGRRAPCVYT-EDLDIESDEPASTEPVHDQLLPAPGLGPLQIQPLT 578
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 867 SrrPTPKLLSPSreealGTSSDQTPNPSPRsfpaqdgdPSKLPPISPSQSKPPRNSSPPTAHSPQQGQVGKASEVKLPLI 946
Cdd:PHA03378 579 S--PTTSQLASS-----APSYAQTPWPVPH--------PSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITF 643
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 947 SPPVQEQAQQhtpnPPQEEeaPTVQLPTIPAPSTEPQLPQNTEP----RPASKPAREKKTPKV-GRASSKkvldlQATPH 1021
Cdd:PHA03378 644 NVLVFPTPHQ----PPQVE--ITPYKPTWTQIGHIPYQPSPTGAntmlPIQWAPGTMQPPPRApTPMRPP-----AAPPG 712
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1022 SQGPTKQKGAKKKNLMQKETAKESPQQRKMPVGNSQTAPQLESHDKPTPRNESDPLDFRSSPSHTEPVPADPqnqeknhk 1101
Cdd:PHA03378 713 RAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPP-------- 784
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1102 ahKPRKKAQTNPTPKDVAQSTHTS----------------------PNGEMSEGLPQGNETALGEDQPTREGQPPQDPAK 1159
Cdd:PHA03378 785 --APQQRPRGAPTPQPPPQAGPTSmqlmpraapgqqgptkqilrqlLTGGVKRGRPSLKKPAALERQAAAGPTPSPGSGT 862
|
490
....*....|..
gi 2194564643 1160 SAQEGSAPVLHP 1171
Cdd:PHA03378 863 SDKIVQAPVFYP 874
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
967-1128 |
3.06e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 41.57 E-value: 3.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 967 APTVQLPTIPAPSTEPQLPqnTEPRPASKPAREKKTPkvgrASSKKVLDLQATPHSQGPTKQKGAKKKNLMQKETAKESP 1046
Cdd:pfam05539 172 VTTSKTTSWPTEVSHPTYP--SQVTPQSQPATQGHQT----ATANQRLSSTEPVGTQGTTTSSNPEPQTEPPPSQRGPSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1047 QQRKMPVGNSQTAPQLESHDKPTPRNESDP-LDFRSSPSHTEPVPADPQNQEKNHKAHKPRKKAQTNPTPkdvaqsTHTS 1125
Cdd:pfam05539 246 SPQHPPSTTSQDQSTTGDGQEHTQRRKTPPaTSNRRSPHSTATPPPTTKRQETGRPTPRPTATTQSGSSP------PHSS 319
|
...
gi 2194564643 1126 PNG 1128
Cdd:pfam05539 320 PPG 322
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
669-904 |
3.17e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 42.00 E-value: 3.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 669 PEDEPGPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVAP 748
Cdd:PRK08691 360 PLAAASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDA 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 749 SNPAlSEPAQGADLASLSPQRVQDEGTESANPAPRSSTHTLPEDPSHTEVEKPTGGSQRPLKE--ETPKAEVMRAGTPYP 826
Cdd:PRK08691 440 PDEA-QTAAGTAQTSAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPNDEavETETFAHEAPAEPFY 518
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2194564643 827 EIPPPQDSTTkvrEQPGALLPRsrlaptrlpqpqtlAPLQSRRPTPKLLSPSREEALGTSSDQTPNPSPRSFPAQDGD 904
Cdd:PRK08691 519 GYGFPDNDCP---PEDGAEIPP--------------PDWEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPPEFSTEN 579
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
680-995 |
3.48e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.48 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 680 ADQSSTLASQEPPQQPAPAPTLSPQPAPApTLSPQPAPAPTLSPQPApaptlSPQPdQDKESGETKVAPSNPALSEPAQG 759
Cdd:pfam17823 126 AAQSLPAAIAALPSEAFSAPRAAACRANA-SAAPRAAIAAASAPHAA-----SPAP-RTAASSTTAASSTTAASSAPTTA 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 760 AD--LASLSPQR-VQDEGTESANPAPRSSTHTLPEDPSHTEVEKPTGGSQRP---------LKEETPKAEVMRAGTPYPE 827
Cdd:pfam17823 199 ASsaPATLTPARgISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPaalatlaaaAGTVASAAGTINMGDPHAR 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 828 IPPPQDSTtkvreqPGALLPRSRLAPTRlpqPQTLAPLQSRRPTPKLLSPSREealgtssdqtPNPSPRSFPAQDGDPSK 907
Cdd:pfam17823 279 RLSPAKHM------PSDTMARNPAAPMG---AQAQGPIIQVSTDQPVHNTAGE----------PTPSPSNTTLEPNTPKS 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 908 LPPISPS-------QSKPPRNSSPPTAHSPQQGQVGKASEVKLPLISPPVQEQAQQHTPNPPQ----EEEAPTVQLPTIP 976
Cdd:pfam17823 340 VASTNLAvvtttkaQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGILLAPEqvatEATAGTASAGPTP 419
|
330
....*....|....*....
gi 2194564643 977 APSTEPQLPQNTEPRPASK 995
Cdd:pfam17823 420 RSSGDPKTLAMASCQLSTQ 438
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
545-793 |
3.73e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 545 AAKTLAPTAAGAPSSKKTASGVPAHLVPSPRRLARLQADGQKTEAFLEVQTQAVVPENQDPTLPQSQELTEEGEPPEKET 624
Cdd:PHA03247 257 PPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEV 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 625 NVPqqvsssaLGIPQQAQDLP-PKVKeedgQPANLPPKITTEMD-GPEDEPGPPVPKADQSSTlasQEPPQQPAPAPTLS 702
Cdd:PHA03247 337 VSP-------LPRPRQHYPLGfPKRR----RPTWTPPSSLEDLSaGRHHPKRASLPTRKRRSA---RHAATPFARGPGGD 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 703 PQPAPAPTlSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSPqrvqDEGTESANPAP 782
Cdd:PHA03247 403 DQTRPAAP-VPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDP----DDATRKALDAL 477
|
250
....*....|.
gi 2194564643 783 RssTHTLPEDP 793
Cdd:PHA03247 478 R--ERRPPEPP 486
|
|
| PRK12727 |
PRK12727 |
flagellar biosynthesis protein FlhF; |
681-873 |
3.74e-03 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 41.51 E-value: 3.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 681 DQSSTLASQEPPQQPAPAPTLSPQPAPAPtlsPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVA------PSNPALS 754
Cdd:PRK12727 47 DEELVQRALETARSDTPATAAAPAPAPQA---PTKPAAPVHAPLKLSANANMSQRQRVASAAEDMIAamalrqPVSVPRQ 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 755 EPAQGADLASLSPQ-RVQDEGTESANPAPRSSTHTLPEDPSHTEVEKPTGGS-QRPLKEETPKAEVMRAGTPYPEIPPPQ 832
Cdd:PRK12727 124 APAAAPVRAASIPSpAAQALAHAAAVRTAPRQEHALSAVPEQLFADFLTTAPvPRAPVQAPVVAAPAPVPAIAAALAAHA 203
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2194564643 833 DSTTKVREQ----------------PGALLPRSRLAPtrlPQPQTLAPLQSRRPTPK 873
Cdd:PRK12727 204 AYAQDDDEQldddgfdlddalpqilPPAALPPIVVAP---AAPAALAAVAAAAPAPQ 257
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
557-993 |
4.22e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 41.58 E-value: 4.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 557 PSSKKTASGVPAHLVPSPRRLARLQADGQ--KTEAF------LEVQTQAVVPENQDPTLPQSQELTEEGEP---PEKETN 625
Cdd:PHA03377 455 PSDQPSVPVEPAHLTPVEHTTVILHQPPQspPTVAIkpapppSRRRRGACVVYDDDIIEVIDVETTEEEESvtqPAKPHR 534
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 626 VPQqvSSSALGIPQQAQDLPPKVKEED-GQPANLPPKITTEMDGPEDEPGPPVPKADQSSTLASQEPPQQPAPAPTLSPQ 704
Cdd:PHA03377 535 KVQ--DGFQRSGRRQKRATPPKVSPSDrGPPKASPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCKDGPPASGP 612
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 705 PAPAPTLSPQPAPAPT---------LSPQP-APAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSPQRVQDEG 774
Cdd:PHA03377 613 HEKQPPSSAPRDMAPSvvrmflrerLLEQStGPKPKSFWEMRAGRDGSGIQQEPSSRRQPATQSTPPRPSWLPSVFVLPS 692
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 775 TESANPAPRSSTHTLPEDPShteveKPTGGSQRPlKEETPKAEVMRAGTPYPEIPPPQDSTTKVREQPGAllPRSRLAPT 854
Cdd:PHA03377 693 VDAGRAQPSEESHLSSMSPT-----QPISHEEQP-RYEDPDDPLDLSLHPDQAPPPSHQAPYSGHEEPQA--QQAPYPGY 764
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 855 RLPQPQTLAPLQSRRPTPKLLSPSreEALGTSSDQTPNPS-PR---SFPAQDGDPSKLPPISPSQSKPPrNSSPPTAHSP 930
Cdd:PHA03377 765 WEPRPPQAPYLGYQEPQAQGVQVS--SYPGYAGPWGLRAQhPRyrhSWAYWSQYPGHGHPQGPWAPRPP-HLPPQWDGSA 841
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2194564643 931 QQGQVGKASevklpliSPPVQEQaqqhtPNPPQEEEAPTVQLPTIPAPSTEPQLPQNTEPRPA 993
Cdd:PHA03377 842 GHGQDQVSQ-------FPHLQSE-----TGPPRLQLSQVPQLPYSQTLVSSSAPSWSSPQPRA 892
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
668-749 |
4.51e-03 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 38.95 E-value: 4.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 668 GPEDEPGPPVpkadqsstlaSQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVA 747
Cdd:pfam05104 50 LPESEQADES----------EEEPREFKTPDEAPSAALEPEPVPTPVPAPVEPEPAPPSESPAPSPKEKKKKEKKSAKVE 119
|
..
gi 2194564643 748 PS 749
Cdd:pfam05104 120 PA 121
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
674-760 |
4.62e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.41 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 674 GPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKVAPSNPAL 753
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
|
....*..
gi 2194564643 754 SEPAQGA 760
Cdd:PRK12270 117 VTPLRGA 123
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
673-800 |
5.42e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 40.88 E-value: 5.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 673 PGPPVPKADQSSTLASQEPPQQPAPAPtlsPQPAPAPTLSPQPAPAPTLSP-QPAPAPTLSP-QPDQDKESGETKVAPSN 750
Cdd:PRK14965 382 PAPPSAAWGAPTPAAPAAPPPAAAPPV---PPAAPARPAAARPAPAPAPPAaAAPPARSADPaAAASAGDRWRAFVAFVK 458
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2194564643 751 PAlsEPAQGADLASLSPQRVQDEGTESANPAPRSSTHTLPEDPSHTEVEK 800
Cdd:PRK14965 459 GK--KPALGASLEQGSPLGVSAGLLEIGFPEGSFELSAMQDPDSRAELKA 506
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
668-744 |
5.48e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.03 E-value: 5.48e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2194564643 668 GPEDEPGPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGET 744
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
661-864 |
5.55e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.12 E-value: 5.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 661 KITTEMDGPEDEPGPPVPKADQSSTLASQEPPQQPapaptlSPQPAPAPTlsPQPAPAPTLSPQPAPAPTLSPQPDQDKE 740
Cdd:PRK07764 583 QVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAA------PAAPAAPAA--PAPAGAAAAPAEASAAPAPGVAAPEHHP 654
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 741 SGETKVAPSNPALSEPAQGADLASLSP-QRVQDEGTESANPAPRSSTHTLPEDPSHTE-VEKPTGGSQRPLKEETPKAEV 818
Cdd:PRK07764 655 KHVAVPDASDGGDGWPAKAGGAAPAAPpPAPAPAAPAAPAGAAPAQPAPAPAATPPAGqADDPAAQPPQAAQGASAPSPA 734
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2194564643 819 MRAGTPYPEIPPPQDSTTKVREQPGA-LLPRSRLAPTRLPQPQTLAP 864
Cdd:PRK07764 735 ADDPVPLPPEPDDPPDPAGAPAQPPPpPAPAPAAAPAAAPPPSPPSE 781
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
877-990 |
5.56e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.85 E-value: 5.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 877 PSREEALGTSSDQTPNPSPRSFPAQDGDPSKLPPIS-------PSQSKPPRNSSPPTAHSPQQGQVGKASEVKLPliSPP 949
Cdd:PRK14951 375 PAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAasapaapPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAP--APP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2194564643 950 VQEQAQQHTPNPPQEEEAPTVQLPTIPAPSTEPQLPQNTEP 990
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
667-1093 |
6.02e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 41.19 E-value: 6.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 667 DGPEDEPGPPVPKADQSSTLASQEPPQQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDKESGETKV 746
Cdd:PHA03377 521 EEEESVTQPAKPHRKVQDGFQRSGRRQKRATPPKVSPSDRGPPKASPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQ 600
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 747 APSNPAlsEPAQGadlaslsPQRVQDEGTESANPAPRSSTHTLPEdpshTEVEKPTGGSQRPLKEetpkaevMRAGTPYP 826
Cdd:PHA03377 601 AKCKDG--PPASG-------PHEKQPPSSAPRDMAPSVVRMFLRE----RLLEQSTGPKPKSFWE-------MRAGRDGS 660
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 827 EIPPPQDSttkvREQPGALLPRSRlaPTRLPQPQTLAPLQSRRPtpkllSPSREEALGTSSDQTPNPSPRSFPAQDGDPS 906
Cdd:PHA03377 661 GIQQEPSS----RRQPATQSTPPR--PSWLPSVFVLPSVDAGRA-----QPSEESHLSSMSPTQPISHEEQPRYEDPDDP 729
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 907 KLPPISPSQSKPPRNSSPPTAHSPQQGQvgkasevklpliSPPVQEQAQQHTPNPP----QEEEAPTVQLPTIPAPSTeP 982
Cdd:PHA03377 730 LDLSLHPDQAPPPSHQAPYSGHEEPQAQ------------QAPYPGYWEPRPPQAPylgyQEPQAQGVQVSSYPGYAG-P 796
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 983 QLPQNTEPRPASKPAREKKTPKVGrasskkvldlqatpHSQGPTKQKGAKKKNLMQKETAKESPQQRKMPVGNSQTAPQL 1062
Cdd:PHA03377 797 WGLRAQHPRYRHSWAYWSQYPGHG--------------HPQGPWAPRPPHLPPQWDGSAGHGQDQVSQFPHLQSETGPPR 862
|
410 420 430
....*....|....*....|....*....|.
gi 2194564643 1063 ESHDKPTPRNESDPLDFRSSPSHTEPVPADP 1093
Cdd:PHA03377 863 LQLSQVPQLPYSQTLVSSSAPSWSSPQPRAP 893
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
857-939 |
6.40e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 40.70 E-value: 6.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 857 PQPQTLAPLQSRRPTPKLLSPSREEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSKPPRnsspPTAHSPQQGQVG 936
Cdd:PRK14954 382 PSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSPASAPTPEQQPPVARSAPLPPS----PQASAPRNVASG 457
|
...
gi 2194564643 937 KAS 939
Cdd:PRK14954 458 KPG 460
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
703-900 |
6.78e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.63 E-value: 6.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 703 PQPAPAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQdkESGETKVAPSNPALSEPAQG---------ADLASLSPQRVQDE 773
Cdd:PRK12323 385 PAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAV--AAAPARRSPAPEALAAARQAsargpggapAPAPAPAAAPAAAA 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 774 GTESANPAPRSSTHTLPEDPSHTEVEKPTGGSQRPLKEETPKAevMRAGTPYPEIPPPQDSTTKVREQPGALLPRSRLAP 853
Cdd:PRK12323 463 RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPE--FASPAPAQPDAAPAGWVAESIPDPATADPDDAFET 540
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2194564643 854 TRLPQPQTLAPlQSRRPTPKLLSPSREEAlgtSSDQTPNPSPRSFPA 900
Cdd:PRK12323 541 LAPAPAAAPAP-RAAAATEPVVAPRPPRA---SASGLPDMFDGDWPA 583
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
883-1026 |
7.89e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 40.48 E-value: 7.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 883 LGTSSDQTPNPSPR---SFPAQDGDPSKLPpiSPSQSKPPRNSSPPTAHSPQQGQVGKAsevklplispPVQEQAQQHTP 959
Cdd:PHA03269 17 LIIANLNTNIPIPElhtSAATQKPDPAPAP--HQAASRAPDPAVAPTSAASRKPDLAQA----------PTPAASEKFDP 84
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2194564643 960 NPpqeeeAPTVQLPTIPAPSTEPQLPQNTEPRPASKP---AREKKTPKVGRAS--SKKVLDLQATPHSQGPT 1026
Cdd:PHA03269 85 AP-----APHQAASRAPDPAVAPQLAAAPKPDAAEAFtsaAQAHEAPADAGTSaaSKKPDPAAHTQHSPPPF 151
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
802-1189 |
7.97e-03 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 40.43 E-value: 7.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 802 TGGSQRPLKEETPKAEVMRA-------GTPY------PEIPPPQDSTTKVREQPGAL--------LPR--SRLAPTRLPQ 858
Cdd:PHA03379 300 TTSIQTPWLDENPSTETAQAwnagllrGRAYgldllrTEGEHDEGATGETREESEDTesdgddeeLPRivSREGTKRKRP 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 859 PQTLAPLQS---------RRPTPKLLSPSREEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSqskpprnssPPTAHS 929
Cdd:PHA03379 380 PIFLRRLHRlllmragklTERAREALEKASEPTYGTPRPPVEKPRPEVPQSLETATSHGSAQVPE---------PPPVHD 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 930 PQQGqvgkasevklplispPVQeqaQQHTPNPPQEEEAPTVQLPTIPAPSTEPQLPQNTEPRPASKPAREKKTPKVGRAS 1009
Cdd:PHA03379 451 LEPG---------------PLH---DQHSMAPCPVAQLPPGPLQDLEPGDQLPGVVQDGRPACAPVPAPAGPIVRPWEAS 512
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1010 SKKVLDLQATPHSQGPTKQKGAKKKNLMQKETAKESPQQRKMpVGNSQTAPQLESHDK-------PTPRNESDPLDFRSS 1082
Cdd:PHA03379 513 LSQVPGVAFAPVMPQPMPVEPVPVPTVALERPVCPAPPLIAM-QGPGETSGIVRVRERwrpapwtPNPPRSPSQMSVRDR 591
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 1083 PSHTepvpadpqnqeknhkahKPRKKAQTNPTPKDVAQSTHTSPNGEMseglpqgnETALGEDQPTREGQPPQDPAKSAQ 1162
Cdd:PHA03379 592 LARL-----------------RAEAQPYQASVEVQPPQLTQVSPQQPM--------EYPLEPEQQMFPGSPFSQVADVMR 646
|
410 420
....*....|....*....|....*..
gi 2194564643 1163 EGSAPVLHPGEREQAQKREKSQKREVA 1189
Cdd:PHA03379 647 AGGVPAMQPQYFDLPLQQPISQGAPLA 673
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
547-1010 |
8.07e-03 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 40.44 E-value: 8.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 547 KTLAPTAAGAPSSKKTASGVPAhLVPSPRRLARLQADGQKTEAFLEvqtqavvpenqdptlPQSQELTEEGEPPEKETNV 626
Cdd:pfam03546 52 KTPQVRAASAPAKESPRKGAPP-VPPGKTGPAAAQAQAGKPEEDSE---------------SSSEESDSDGETPAAATLT 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 627 PQQVSSSALGIPQQAQDLPPKVKEEDGQPANLPPKITTEMDGPEDEpgppVPKADQSSTLASQEPPQQPAPAPTLSPQPA 706
Cdd:pfam03546 116 TSPAQVKPLGKNSQVRPASTVGKGPSGKGANPAPPGKAGSAAPLVQ----VGKKEEDSESSSEESDSEGEAPPAATQAKP 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 707 PAPTLSPQPAPAPTLSPQPAPAPTLSPQPDQDK---------------ESGETKVAPSNPALSEPAQGADLASLSPQRVQ 771
Cdd:pfam03546 192 SGKILQVRPASGPAKGAAPAPPQKAGPVATQVKaerskedsesseessDSEEEAPAAATPAQAKPALKTPQTKASPRKGT 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 772 DEGTESANPAP---------RSSTHTLPEDPSHTEVEKptgGSQRPLKEETPKAEvmragTPYPEIPPPQDSTTKVREQP 842
Cdd:pfam03546 272 PITPTSAKVPPvrvgtpapwKAGTVTSPACASSPAVAR---GAQRPEEDSSSSEE-----SESEEETAPAAAVGQAKSVG 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 843 GALLPRSRLAPTRLPQPQTLAPL--QSRRPTPKLLSPSREEALGTSSDQTPNPSPRSFPAQDGDPSKLPPISPSQSkPPR 920
Cdd:pfam03546 344 KGLQGKAASAPTKGPSGQGTAPVppGKTGPAVAQVKAEAQEDSESSEEESDSEEAAATPAQVKASGKTPQAKANPA-PTK 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2194564643 921 NSSPPTAHSP--------QQGQVGKASEVKLPLISPPVQEQAQQHTPNPPQEEEAPTVQLPTIPAPSTEPQLPQNTEPRP 992
Cdd:pfam03546 423 ASSAKGAASApgkvvaaaAQAKQGSPAKVKPPARTPQNSAISVRGQASVPAVGKAVATAAQAQKGPVGGPQEEDSESSEE 502
|
490 500
....*....|....*....|....*.
gi 2194564643 993 ASK-----PAREK---KTPKVGRASS 1010
Cdd:pfam03546 503 ESDseeeaPAQAKpsgKTPQVRAASA 528
|
|
| |
