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Conserved domains on  [gi|2173616068|ref|NP_001386266|]
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transmembrane protein 213 [Rattus norvegicus]

Protein Classification

TMEM213 domain-containing protein( domain architecture ID 10633557)

TMEM213 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TMEM213 pfam15192
TMEM213 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 50-127 2.95e-46

TMEM213 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between and 154 amino acids in length. The function of this family is unknown.


:

Pssm-ID: 464555  Cd Length: 79  Bit Score: 144.38  E-value: 2.95e-46
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2173616068  50 ASSGNST-LSTHHPDPGTLEQCANVDFCPLASLCCRASVDEYGWIAAAVGWSFWFLTLILLCVDKLMKLTPEEPKDLAA 127
Cdd:pfam15192   1 ASSSNSSaVTDPQPDPGTLEQCPTVDFCPQAARCCRAGVDEYGWIAAAVGWSLWFLTLILLCVGKLMKLTPDEPKDLRA 79
 
Name Accession Description Interval E-value
TMEM213 pfam15192
TMEM213 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 50-127 2.95e-46

TMEM213 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between and 154 amino acids in length. The function of this family is unknown.


Pssm-ID: 464555  Cd Length: 79  Bit Score: 144.38  E-value: 2.95e-46
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2173616068  50 ASSGNST-LSTHHPDPGTLEQCANVDFCPLASLCCRASVDEYGWIAAAVGWSFWFLTLILLCVDKLMKLTPEEPKDLAA 127
Cdd:pfam15192   1 ASSSNSSaVTDPQPDPGTLEQCPTVDFCPQAARCCRAGVDEYGWIAAAVGWSLWFLTLILLCVGKLMKLTPDEPKDLRA 79
 
Name Accession Description Interval E-value
TMEM213 pfam15192
TMEM213 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 50-127 2.95e-46

TMEM213 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between and 154 amino acids in length. The function of this family is unknown.


Pssm-ID: 464555  Cd Length: 79  Bit Score: 144.38  E-value: 2.95e-46
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2173616068  50 ASSGNST-LSTHHPDPGTLEQCANVDFCPLASLCCRASVDEYGWIAAAVGWSFWFLTLILLCVDKLMKLTPEEPKDLAA 127
Cdd:pfam15192   1 ASSSNSSaVTDPQPDPGTLEQCPTVDFCPQAARCCRAGVDEYGWIAAAVGWSLWFLTLILLCVGKLMKLTPDEPKDLRA 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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