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Conserved domains on  [gi|1972299259|ref|NP_001379258|]
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UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [Caenorhabditis elegans]

Protein Classification

UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase( domain architecture ID 10160631)

UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc onto the carrier lipid dolichyl phosphate in the dolichol pathway of N-linked protein glycosylation; belongs to glycosyltransferase family 4

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT_GPT_euk cd06855
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from ...
24-321 3.94e-135

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.


:

Pssm-ID: 133465  Cd Length: 283  Bit Score: 388.53  E-value: 3.94e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  24 ILTYIPIFIARKMYGNDQCKVSNAPVPEPMGVICAAVYLIVMFMFIPFPFLEwkgqsEFPYEKLLALLSGLISISTAILL 103
Cdd:cd06855     1 IPKFGPLFIKAGLYGIDLNKNGEEKIPESAGLVPGIVFLIVLFLFIPFPFLK-----DFPHDKLVEYLSALLSICCMTFL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 104 GFADDMLDLKWRHKLLFPTLSSLPLLMVYYVSGNSTTVIVPtivrhlvqPIVLLPVTINISFIYYIFMGMVIVFCTNAIN 183
Cdd:cd06855    76 GFADDVLDLRWRHKLILPTFASLPLLMVYYGNTGITLPIVP--------LRPLLGTLIDLGILYYVYMILLAVFCTNSIN 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 184 ILAGINGLESGQSLVISASVCLFNFVQIFRFSaeNSTGFWHHTISLYFLLPFTACTAILFYFNKYPSRVFVGDTFCYWSG 263
Cdd:cd06855   148 IYAGINGLEVGQSLVIALSILLYNLLELNGSS--GSMTLDAHLFSLYLLLPFIAVSLALLYYNWYPSKVFVGDTFTYFAG 225
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1972299259 264 MTLAVVSILGHFSKTLMLFFVPQIINFLYSIPQLFHLVPCPRHRLPKYDPKTDTVSMS 321
Cdd:cd06855   226 MVFAVVGILGHFSKTLLLFFIPQIINFLYSLPQLFGIVPCPRHRLPKFNPKTGLLEPS 283
 
Name Accession Description Interval E-value
GT_GPT_euk cd06855
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from ...
24-321 3.94e-135

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.


Pssm-ID: 133465  Cd Length: 283  Bit Score: 388.53  E-value: 3.94e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  24 ILTYIPIFIARKMYGNDQCKVSNAPVPEPMGVICAAVYLIVMFMFIPFPFLEwkgqsEFPYEKLLALLSGLISISTAILL 103
Cdd:cd06855     1 IPKFGPLFIKAGLYGIDLNKNGEEKIPESAGLVPGIVFLIVLFLFIPFPFLK-----DFPHDKLVEYLSALLSICCMTFL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 104 GFADDMLDLKWRHKLLFPTLSSLPLLMVYYVSGNSTTVIVPtivrhlvqPIVLLPVTINISFIYYIFMGMVIVFCTNAIN 183
Cdd:cd06855    76 GFADDVLDLRWRHKLILPTFASLPLLMVYYGNTGITLPIVP--------LRPLLGTLIDLGILYYVYMILLAVFCTNSIN 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 184 ILAGINGLESGQSLVISASVCLFNFVQIFRFSaeNSTGFWHHTISLYFLLPFTACTAILFYFNKYPSRVFVGDTFCYWSG 263
Cdd:cd06855   148 IYAGINGLEVGQSLVIALSILLYNLLELNGSS--GSMTLDAHLFSLYLLLPFIAVSLALLYYNWYPSKVFVGDTFTYFAG 225
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1972299259 264 MTLAVVSILGHFSKTLMLFFVPQIINFLYSIPQLFHLVPCPRHRLPKYDPKTDTVSMS 321
Cdd:cd06855   226 MVFAVVGILGHFSKTLLLFFIPQIINFLYSLPQLFGIVPCPRHRLPKFNPKTGLLEPS 283
Glycos_transf_4 pfam00953
Glycosyl transferase family 4;
91-273 6.92e-21

Glycosyl transferase family 4;


Pssm-ID: 460008  Cd Length: 158  Bit Score: 88.43  E-value: 6.92e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  91 LSGLISISTAILLGFADDMLDLKWRHKLLFPTLSSLPLLMVYYVSGNSTtvivptivrhlvqPIVLLPVTINISFIYYIF 170
Cdd:pfam00953   1 LGLLLGALLIGLIGLIDDLLGLSARIKLLLQALAALILLVLGGIGLTSL-------------GLPFGGGSLELGPWLSIL 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 171 MGMVIVFC-TNAINILAGINGLESGQSLVISASVCLFNFVQifrfsaenstgfwHHTISLYFLLPFTACTAILFYFNKYP 249
Cdd:pfam00953  68 LTLFAIVGlTNAVNFIDGLDGLAGGVAIIAALALGIIAYLL-------------GNLELALLSLALLGALLGFLPFNFYP 134
                         170       180
                  ....*....|....*....|....
gi 1972299259 250 SRVFVGDTFCYWSGMTLAVVSILG 273
Cdd:pfam00953 135 AKIFMGDSGSLFLGFLLAVLAIIG 158
Rfe COG0472
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate ...
14-284 1.16e-18

UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440240  Cd Length: 288  Bit Score: 85.56  E-value: 1.16e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  14 AVGAVICYQLILTYIPIFIARKMYGN-DQCKVSNAPVPEPMGVICAAVYLIVMFMFIPFPFLEwkgqsefpyekLLALLS 92
Cdd:COG0472     8 LLAFLLSLLLTPLLIRLARRLGLVDDpNERKSHKRPTPRMGGIAIFLGFLLALLLLALLSNPE-----------LLLLLL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  93 GLISIStaiLLGFADDMLDLKWRHKLLFPTLSSLpllMVYYVSGNSTTVIVPtivrhlvqpivlLPVTINISFIYYIFMG 172
Cdd:COG0472    77 GALLLG---LIGFLDDLLGLSARQKLLGQLLAAL---LLVLLLLRITSLTIP------------FFGLLDLGWLYIPLTV 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 173 MVIVFCTNAINILAGINGLESGQSLVISASVCLFNFVQifrfsaenstgfwHHTISLYFLLPFTACTAILFYFNKYPSRV 252
Cdd:COG0472   139 FWIVGVSNAVNLTDGLDGLAAGVSLIAALALAIIAYLA-------------GQGELALLAAALAGALLGFLWFNFPPAKI 205
                         250       260       270
                  ....*....|....*....|....*....|..
gi 1972299259 253 FVGDTFCYWSGMTLAVVSILGHFSKTLMLFFV 284
Cdd:COG0472   206 FMGDTGSLFLGFALAALAILGRQEGASLLLLL 237
 
Name Accession Description Interval E-value
GT_GPT_euk cd06855
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from ...
24-321 3.94e-135

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.


Pssm-ID: 133465  Cd Length: 283  Bit Score: 388.53  E-value: 3.94e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  24 ILTYIPIFIARKMYGNDQCKVSNAPVPEPMGVICAAVYLIVMFMFIPFPFLEwkgqsEFPYEKLLALLSGLISISTAILL 103
Cdd:cd06855     1 IPKFGPLFIKAGLYGIDLNKNGEEKIPESAGLVPGIVFLIVLFLFIPFPFLK-----DFPHDKLVEYLSALLSICCMTFL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 104 GFADDMLDLKWRHKLLFPTLSSLPLLMVYYVSGNSTTVIVPtivrhlvqPIVLLPVTINISFIYYIFMGMVIVFCTNAIN 183
Cdd:cd06855    76 GFADDVLDLRWRHKLILPTFASLPLLMVYYGNTGITLPIVP--------LRPLLGTLIDLGILYYVYMILLAVFCTNSIN 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 184 ILAGINGLESGQSLVISASVCLFNFVQIFRFSaeNSTGFWHHTISLYFLLPFTACTAILFYFNKYPSRVFVGDTFCYWSG 263
Cdd:cd06855   148 IYAGINGLEVGQSLVIALSILLYNLLELNGSS--GSMTLDAHLFSLYLLLPFIAVSLALLYYNWYPSKVFVGDTFTYFAG 225
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1972299259 264 MTLAVVSILGHFSKTLMLFFVPQIINFLYSIPQLFHLVPCPRHRLPKYDPKTDTVSMS 321
Cdd:cd06855   226 MVFAVVGILGHFSKTLLLFFIPQIINFLYSLPQLFGIVPCPRHRLPKFNPKTGLLEPS 283
GT_GPT_like cd06851
This family includes eukaryotic UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) and ...
38-292 5.46e-51

This family includes eukaryotic UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) and archaeal GPT-like glycosyltransferases. Eukaryotic GPT catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-linked glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. Evidence for the existence of the N-glycosylation pathway in archaea has emerged and genes responsible for the pathway have been identified. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaeal gene, indicating eukaryotic and archaeal enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme, which uses a different substrate.


Pssm-ID: 133461  Cd Length: 223  Bit Score: 171.14  E-value: 5.46e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  38 GNDQCKVSNAPVPEPMGVICAAVYLIVMFMFIPFPFLEwkgqseFPYEKLLALLSGLISISTAILLGFADDMLDLKWRHK 117
Cdd:cd06851     2 GKDMNKKGNVMIPEPGGISILIGFVASEITLIFFPFLS------FPHFPISEILAALITSVLGFSVGIIDDRLTMGGWFK 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 118 LLFPTLSSLPLLMVYYVSGNSTTVIVPTIVRhlvqpivllpvtinISFIYYIFMGMVIVFCTNAINILAGINGLESGQSL 197
Cdd:cd06851    76 PVALAFAAAPILLLGAYDSNLDFPLFGGSVK--------------IPSLYLVLVVFMIVITGNAFNSIAGLNGVEAGFTT 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 198 VISASVCLFNFVQIfrfsaenstgfwhHTISLYFLLPFTACTAILFYFNKYPSRVFVGDTFCYWSGMTLAVVSILGHFSK 277
Cdd:cd06851   142 IISFALAISLLVQQ-------------NYEIGIACLCLAFASLAFLYYNKYPSRIFPGDTGAYMFGATYAVVAILGEVEK 208
                         250
                  ....*....|....*
gi 1972299259 278 TLMLFFVPQIINFLY 292
Cdd:cd06851   209 IAAVAFIPAIINFFL 223
GT_MraY-like cd06499
Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine: ...
48-270 1.86e-30

Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases. They catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate, which is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. One member, D-N-acetylhexosamine 1-phosphate transferase (GPT) is a eukaryotic enzyme, which is specific for UDP-GlcNAc as donor substrate and dolichol-phosphate as the membrane bound acceptor. The bacterial members MraY, WecA, and WbpL/WbcO utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic endproducts implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The eukaryotic reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for N-glycosylation. The prokaryotic reactions lead to the formation of polyprenol-linked oligosaccharides involved in bacterial cell wall and peptidoglycan assembly. Archaeal and eukaryotic enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme. Archaea possess the same N-glycosylation pathway as eukaryotes. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaea gene.


Pssm-ID: 133460  Cd Length: 185  Bit Score: 115.48  E-value: 1.86e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  48 PVPEPMGVICAAVYLIVMFMFIPFPFLEwkgqsefpyekllaLLSGLISISTAILLGFADDMLDLK----WRHKLLFPTL 123
Cdd:cd06499     1 PTPTMGGLAILLGFLLGVLLYIPHSNTL--------------ILLALLSGLVAGIVGFIDDLLGLKvelsEREKLLLQIL 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 124 SSLPLLMVYYVSgnsTTVIVPtivrhlvqpivlLPVTINISFIYYIFMGMVIVFCTNAINILAGINGLESGQSLVISASV 203
Cdd:cd06499    67 AALFLLLIGGGH---TTVTTP------------LGFVLDLGIFYIPFAIIAIVGATNAVNLIDGMDGLAAGISVIASIAC 131
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1972299259 204 CLFNFVQifrfsaenstGFWHhtiSLYFLLPFTACTAILFYFNKYPSRVFVGDTFCYWSGMTLAVVS 270
Cdd:cd06499   132 ALFALLS----------GQTT---SALLFIILAGACLGFLYFNFYPAKIFMGDTGSYFLGAAYAAVA 185
GT_GPT_archaea cd06856
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT)-like proteins in archaea. Eukaryotic GPT ...
37-291 8.99e-25

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT)-like proteins in archaea. Eukaryotic GPT catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-linked glycosylation. Evidence for the existence of the N-glycosylation pathway in archaea has emerged and genes responsible for the pathway have been identified. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaea gene, indicating that eukaryotic and archaeal enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme, which uses a different substrate.


Pssm-ID: 133466  Cd Length: 280  Bit Score: 102.71  E-value: 8.99e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  37 YGNDQCKVSNAPVPEPMGVICAAVYLIVMFMFIPFpflewkgqseFPYEKLLALLsglISISTAILLGFADDMLDLKWRH 116
Cdd:cd06856     1 VGRDVHKPGKPEVPEMGGIAVLLGFSLGLLFLSAL----------THSVEALALL---ITSLLAGLIGLLDDILGLSQSE 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 117 KLLFPTLSSLPLLMVYYvsgnSTTVIVPTIVRHlvqpivllpvtINISFIYYIFMGMVIVFCTNAINILAGINGLESGQS 196
Cdd:cd06856    68 KVLLTALPAIPLLVLKA----GNPLTSLPIGGR-----------VLGILYYLLIVPLGITGASNAFNMLAGFNGLEAGMG 132
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 197 LVISASVCLFNFVQifrfsaenstgfwHHTISLYFLLPFTACTAILFYFNKYPSRVFVGDTFCYWSGMTLAVVSILGHFS 276
Cdd:cd06856   133 IIILLALAIILLIN-------------GDYDALIIALILVAALLAFLLYNKYPAKVFPGDVGTLPIGALIGTIAVLGGLE 199
                         250
                  ....*....|....*
gi 1972299259 277 KTLMLFFVPQIINFL 291
Cdd:cd06856   200 IILLILLLPYVIDFL 214
Glycos_transf_4 pfam00953
Glycosyl transferase family 4;
91-273 6.92e-21

Glycosyl transferase family 4;


Pssm-ID: 460008  Cd Length: 158  Bit Score: 88.43  E-value: 6.92e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  91 LSGLISISTAILLGFADDMLDLKWRHKLLFPTLSSLPLLMVYYVSGNSTtvivptivrhlvqPIVLLPVTINISFIYYIF 170
Cdd:pfam00953   1 LGLLLGALLIGLIGLIDDLLGLSARIKLLLQALAALILLVLGGIGLTSL-------------GLPFGGGSLELGPWLSIL 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 171 MGMVIVFC-TNAINILAGINGLESGQSLVISASVCLFNFVQifrfsaenstgfwHHTISLYFLLPFTACTAILFYFNKYP 249
Cdd:pfam00953  68 LTLFAIVGlTNAVNFIDGLDGLAGGVAIIAALALGIIAYLL-------------GNLELALLSLALLGALLGFLPFNFYP 134
                         170       180
                  ....*....|....*....|....
gi 1972299259 250 SRVFVGDTFCYWSGMTLAVVSILG 273
Cdd:pfam00953 135 AKIFMGDSGSLFLGFLLAVLAIIG 158
Rfe COG0472
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate ...
14-284 1.16e-18

UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440240  Cd Length: 288  Bit Score: 85.56  E-value: 1.16e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  14 AVGAVICYQLILTYIPIFIARKMYGN-DQCKVSNAPVPEPMGVICAAVYLIVMFMFIPFPFLEwkgqsefpyekLLALLS 92
Cdd:COG0472     8 LLAFLLSLLLTPLLIRLARRLGLVDDpNERKSHKRPTPRMGGIAIFLGFLLALLLLALLSNPE-----------LLLLLL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  93 GLISIStaiLLGFADDMLDLKWRHKLLFPTLSSLpllMVYYVSGNSTTVIVPtivrhlvqpivlLPVTINISFIYYIFMG 172
Cdd:COG0472    77 GALLLG---LIGFLDDLLGLSARQKLLGQLLAAL---LLVLLLLRITSLTIP------------FFGLLDLGWLYIPLTV 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 173 MVIVFCTNAINILAGINGLESGQSLVISASVCLFNFVQifrfsaenstgfwHHTISLYFLLPFTACTAILFYFNKYPSRV 252
Cdd:COG0472   139 FWIVGVSNAVNLTDGLDGLAAGVSLIAALALAIIAYLA-------------GQGELALLAAALAGALLGFLWFNFPPAKI 205
                         250       260       270
                  ....*....|....*....|....*....|..
gi 1972299259 253 FVGDTFCYWSGMTLAVVSILGHFSKTLMLFFV 284
Cdd:COG0472   206 FMGDTGSLFLGFALAALAILGRQEGASLLLLL 237
GT_WecA_like cd06853
This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. ...
43-285 1.19e-17

This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.


Pssm-ID: 133463  Cd Length: 249  Bit Score: 81.77  E-value: 1.19e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  43 KVSNAPVPEPMGVICAAVYLIVMFMFIPFPFLEWKgqsefpyeKLLALLSGLISIstaILLGFADDMLDLKWRHKLLFPT 122
Cdd:cd06853     2 KVHKGPIPRLGGLAIFLGFLLALLLALLFPFFLLP--------ELLGLLAGATII---VLLGLLDDLFDLSPKVKLLGQI 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 123 LSSLpllMVYYVSGNSTTVIVPTIVRHLVQPIVLLPVTInisfiyyifmgMVIVFCTNAINILAGINGLESGQSLVISAS 202
Cdd:cd06853    71 LAAL---IVVFGGGVILSLLGPFGGGIILLGWLSIPLTV-----------LWIVGIINAINLIDGLDGLAGGVALIASLA 136
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 203 VCLFnfvqifrfsaenstgFWHHTISLYFLLPFTACTAIL--FYFNKYPSRVFVGDTFCYWSGMTLAVVSILGHF-SKTL 279
Cdd:cd06853   137 LAIL---------------ALLNGQVLVALLALALAGALLgfLPYNFHPARIFMGDAGSLFLGFLLAVLSILGTQkSSTA 201

                  ....*.
gi 1972299259 280 MLFFVP 285
Cdd:cd06853   202 ISPVVP 207
GT_MraY cd06852
Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the ...
102-284 8.56e-11

Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan. It catalyzes the formation of undecaprenyl-pyrophosphoryl-N-acetylmuramoyl-pentapeptide from UDP-MurNAc-pentapeptide and undecaprenyl-phosphate. It is an integral membrane protein with possibly ten transmembrane domains.


Pssm-ID: 133462  Cd Length: 280  Bit Score: 62.12  E-value: 8.56e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 102 LLGFADDMLDLKW--------RHKLLFPTLSSLPLLMVYYVSGNSTTVIVPTIVRHLVqpivllpvtINISFIYYIFMGM 173
Cdd:cd06852    50 LIGFLDDYLKVVKkrnlglsaRQKLLLQFLIAIVFALLLYYFNGSGTLITLPFFKNGL---------IDLGILYIPFAIF 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 174 VIVFCTNAINILAGINGLESGQSLVISASVCLFNFVQIfrfsaenstgfwHHTISLYFLLPFT-ACTAILFyFNKYPSRV 252
Cdd:cd06852   121 VIVGSSNAVNLTDGLDGLAAGVSIIVALALAIIAYLAG------------NAVFLAVFCAALVgACLGFLW-FNAYPAKV 187
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1972299259 253 FVGDTFCYWSGMTLAVVSILghfSKTLMLFFV 284
Cdd:cd06852   188 FMGDTGSLALGGALAALAIL---TKQELLLLI 216
GT_MraY_like cd06912
This subfamily is composed of uncharacterized bacterial glycosyltransferases in the MraY-like ...
62-270 2.96e-05

This subfamily is composed of uncharacterized bacterial glycosyltransferases in the MraY-like family. This family contains both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases, which catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate. This is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. The three bacterial members MraY, WecA, and WbpL/WbcO, utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic end products implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The prokaryotic enzyme-catalyzed reactions lead to the formation of polyprenol-linked oligosaccharides involved in bacterial cell wall and peptidoglycan assembly.


Pssm-ID: 133467  Cd Length: 193  Bit Score: 44.54  E-value: 2.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259  62 LIVMFMFIPFPFLEWKGQSEFpyeKLLALLSGLIsistAILLGFADDMLDL-KWRHKLLFPTLSSLplLMVYYVSGNSTT 140
Cdd:cd06912    17 VAIFLGLLAGLLLLSLLSGSL---LLLLLLAALP----AFLAGLLEDITKRvSPRIRLLATFLSAL--LAVWLLGASITR 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972299259 141 VIVPTIVRHLVQPIvllpvtinISFIYYIFMgmvIVFCTNAINILAGINGLESGQSLVISASVCLFNFvqifrfsaenst 220
Cdd:cd06912    88 LDLPGLDLLLSFPP--------FAIIFTIFA---VAGVANAFNIIDGFNGLASGVAIISLLSLALVAF------------ 144
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1972299259 221 gFWHHTISLYFLLPFTACTAILFYFNKYPSRVFVGDTFCYWSGMTLAVVS 270
Cdd:cd06912   145 -QVGDTDLAFLALLLAGALLGFLIFNFPFGKIFLGDGGAYLLGFLLAWLA 193
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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