|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
57-1139 |
1.30e-130 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 428.91 E-value: 1.30e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 57 FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYIS-LLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIMQ 135
Cdd:PLN03210 13 YDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDpELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVR 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 136 RRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKifNGDEQKIEELKVALKTASNIRGFVYPENSSEPDFLDEIVKN 215
Cdd:PLN03210 93 CKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQ--NKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIAND 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 216 TFRMLNeLSPCVIPDDLPGIESRSKELEKLLMFDNDEcVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDI---- 291
Cdd:PLN03210 171 VLGKLN-LTPSNDFEDFVGIEDHIAKMSSLLHLESEE-VRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAfisk 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 292 ------EDNSKRYGLP-YLYQKLLHKLLDGENVDVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKKNVYRQGSRIV 364
Cdd:PLN03210 249 smeiysSANPDDYNMKlHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRII 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 365 IITRDKKLLQKNA-DATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLSNDFVCYAKGLPLALKLLGKGLLTHDINYWK 443
Cdd:PLN03210 329 VITKDKHFLRAHGiDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWM 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 444 KKLEFLQVNPDKELQKELKSSYKALDDDQ-KSVFLDIACFFR-------------------------------------I 485
Cdd:PLN03210 409 DMLPRLRNGLDGKIEKTLRVSYDGLNNKKdKAIFRHIACLFNgekvndiklllansdldvniglknlvdkslihvrediV 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 486 EMHDLLHAMGKEIGKEKSiRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTMLSKLKFLKFHS 565
Cdd:PLN03210 489 EMHSLLQEMGKEIVRAQS-NEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYT 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 566 SHCSQwcDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFDPKELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSK 645
Cdd:PLN03210 568 KKWDQ--KKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSK 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 646 DLLNLSGLSRAKNLERLDLEGCTSL-DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISE 724
Cdd:PLN03210 646 NLKEIPDLSMATNLETLKLSDCSSLvELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDIST 725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 725 SIESLHLEGTAIERVVE--HIESLHSLILLNLKNcEKLKYLPNDLYKL-----KSLQELVLSGCSALESLPpikekmecl 797
Cdd:PLN03210 726 NISWLDLDETAIEEFPSnlRLENLDELILCEMKS-EKLWERVQPLTPLmtmlsPSLTRLFLSDIPSLVELP--------- 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 798 eillmdgTSIKQTPEMSCLSnlkicsfcrpvIDDSTGLVVLPFSGN-SFLSDLYLTNCN-IDKLPDKFSSLRSLRclcLS 875
Cdd:PLN03210 796 -------SSIQNLHKLEHLE-----------IENCINLETLPTGINlESLESLDLSGCSrLRTFPDISTNISDLN---LS 854
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 876 RNNIETLPESIEKLYSLLLLDLKHCCRLKSLPLLPSNLQYL---DAHGCGSLENVS---KPLTIPLVTERMHTTF----- 944
Cdd:PLN03210 855 RTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLetvDFSDCGALTEASwngSPSEVAMATDNIHSKLpstvc 934
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 945 -IFTDCFKLNQaekEDIVAQAQLKSQLLartsrhhnhkgllldplvavcFPGHDIPSWFSHQKMGSLIETDLLPH--WCN 1021
Cdd:PLN03210 935 iNFINCFNLDQ---EALLQQQSIFKQLI---------------------LSGEEVPSYFTHRTTGASLTNIPLLHisPCQ 990
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 1022 SKFIGASlCVVVTFkDHEGHHANRLSVRCKSKFKSQNGQFISFSFCLGGWNEScgsscheprKLGSdHVFISynNCNVPV 1101
Cdd:PLN03210 991 PFFRFRA-CAVVDS-ESFFIISVSFDIQVCCRFIDRLGNHFDSPYQPHVFSVT---------KKGS-HLVIF--DCCFPL 1056
|
1130 1140 1150
....*....|....*....|....*....|....*....
gi 1063723654 1102 FKWSEETNEGNRCHptsASFEFYLTDET-ERKLECCEIL 1139
Cdd:PLN03210 1057 NEDNAPLAELNYDH---VDIQFRLTNKNsQLKLKGCGIR 1092
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
57-221 |
1.40e-38 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 141.73 E-value: 1.40e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 57 FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAK--LRGGEYISLLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIM 134
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRdlEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 135 QRRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFngDEQKIEELKVALKTASNIRGFVYPENSSEpdFLDEIVK 214
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVL--TEEKVLKWRGALNEVANIWHSKSVSDESK--FWKKIAY 156
|
....*..
gi 1063723654 215 NTFRMLN 221
Cdd:pfam01582 157 DISNKLN 163
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
56-194 |
2.19e-37 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 137.07 E-value: 2.19e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 56 EFDVFVSFRGA-DTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYISLLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIM 134
Cdd:smart00255 1 EYDVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063723654 135 QRRKEF-NHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFNGDEQKiEELKVALKTASNI 194
Cdd:smart00255 81 ENALEEgGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKE-QFWKKALYAVPSK 140
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
611-882 |
6.71e-21 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 96.93 E-value: 6.71e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 611 KELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSLdllgsvKQMNELIYLNLRDc 690
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEEL------SNLTNLESLDLSG- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 691 TSLESLPKGF-KIKSLKTLILSGClKLKDfhiISESI------ESLHLEGTAIERVVEHIESLHSLILLNLKNCeKLKYL 763
Cdd:COG4886 123 NQLTDLPEELaNLTNLKELDLSNN-QLTD---LPEPLgnltnlKSLDLSNNQLTDLPEELGNLTNLKELDLSNN-QITDL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 764 PNDLYKLKSLQELVLSGCsALESLPPIKEKMECLEILLMDGTSIKQTPEMSCLSNLKIcsfcrpviddstglvvlpfsgn 843
Cdd:COG4886 198 PEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEE---------------------- 254
|
250 260 270
....*....|....*....|....*....|....*....
gi 1063723654 844 sflsdLYLTNCNIDKLPdKFSSLRSLRCLCLSRNNIETL 882
Cdd:COG4886 255 -----LDLSNNQLTDLP-PLANLTNLKTLDLSNNQLTDL 287
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
57-1139 |
1.30e-130 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 428.91 E-value: 1.30e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 57 FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYIS-LLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIMQ 135
Cdd:PLN03210 13 YDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDpELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVR 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 136 RRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKifNGDEQKIEELKVALKTASNIRGFVYPENSSEPDFLDEIVKN 215
Cdd:PLN03210 93 CKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQ--NKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIAND 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 216 TFRMLNeLSPCVIPDDLPGIESRSKELEKLLMFDNDEcVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDI---- 291
Cdd:PLN03210 171 VLGKLN-LTPSNDFEDFVGIEDHIAKMSSLLHLESEE-VRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAfisk 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 292 ------EDNSKRYGLP-YLYQKLLHKLLDGENVDVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKKNVYRQGSRIV 364
Cdd:PLN03210 249 smeiysSANPDDYNMKlHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRII 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 365 IITRDKKLLQKNA-DATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLSNDFVCYAKGLPLALKLLGKGLLTHDINYWK 443
Cdd:PLN03210 329 VITKDKHFLRAHGiDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWM 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 444 KKLEFLQVNPDKELQKELKSSYKALDDDQ-KSVFLDIACFFR-------------------------------------I 485
Cdd:PLN03210 409 DMLPRLRNGLDGKIEKTLRVSYDGLNNKKdKAIFRHIACLFNgekvndiklllansdldvniglknlvdkslihvrediV 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 486 EMHDLLHAMGKEIGKEKSiRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTMLSKLKFLKFHS 565
Cdd:PLN03210 489 EMHSLLQEMGKEIVRAQS-NEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYT 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 566 SHCSQwcDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFDPKELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSK 645
Cdd:PLN03210 568 KKWDQ--KKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSK 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 646 DLLNLSGLSRAKNLERLDLEGCTSL-DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISE 724
Cdd:PLN03210 646 NLKEIPDLSMATNLETLKLSDCSSLvELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDIST 725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 725 SIESLHLEGTAIERVVE--HIESLHSLILLNLKNcEKLKYLPNDLYKL-----KSLQELVLSGCSALESLPpikekmecl 797
Cdd:PLN03210 726 NISWLDLDETAIEEFPSnlRLENLDELILCEMKS-EKLWERVQPLTPLmtmlsPSLTRLFLSDIPSLVELP--------- 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 798 eillmdgTSIKQTPEMSCLSnlkicsfcrpvIDDSTGLVVLPFSGN-SFLSDLYLTNCN-IDKLPDKFSSLRSLRclcLS 875
Cdd:PLN03210 796 -------SSIQNLHKLEHLE-----------IENCINLETLPTGINlESLESLDLSGCSrLRTFPDISTNISDLN---LS 854
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 876 RNNIETLPESIEKLYSLLLLDLKHCCRLKSLPLLPSNLQYL---DAHGCGSLENVS---KPLTIPLVTERMHTTF----- 944
Cdd:PLN03210 855 RTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLetvDFSDCGALTEASwngSPSEVAMATDNIHSKLpstvc 934
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 945 -IFTDCFKLNQaekEDIVAQAQLKSQLLartsrhhnhkgllldplvavcFPGHDIPSWFSHQKMGSLIETDLLPH--WCN 1021
Cdd:PLN03210 935 iNFINCFNLDQ---EALLQQQSIFKQLI---------------------LSGEEVPSYFTHRTTGASLTNIPLLHisPCQ 990
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 1022 SKFIGASlCVVVTFkDHEGHHANRLSVRCKSKFKSQNGQFISFSFCLGGWNEScgsscheprKLGSdHVFISynNCNVPV 1101
Cdd:PLN03210 991 PFFRFRA-CAVVDS-ESFFIISVSFDIQVCCRFIDRLGNHFDSPYQPHVFSVT---------KKGS-HLVIF--DCCFPL 1056
|
1130 1140 1150
....*....|....*....|....*....|....*....
gi 1063723654 1102 FKWSEETNEGNRCHptsASFEFYLTDET-ERKLECCEIL 1139
Cdd:PLN03210 1057 NEDNAPLAELNYDH---VDIQFRLTNKNsQLKLKGCGIR 1092
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
57-221 |
1.40e-38 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 141.73 E-value: 1.40e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 57 FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAK--LRGGEYISLLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIM 134
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRdlEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 135 QRRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFngDEQKIEELKVALKTASNIRGFVYPENSSEpdFLDEIVK 214
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVL--TEEKVLKWRGALNEVANIWHSKSVSDESK--FWKKIAY 156
|
....*..
gi 1063723654 215 NTFRMLN 221
Cdd:pfam01582 157 DISNKLN 163
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
56-194 |
2.19e-37 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 137.07 E-value: 2.19e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 56 EFDVFVSFRGA-DTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYISLLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIM 134
Cdd:smart00255 1 EYDVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063723654 135 QRRKEF-NHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFNGDEQKiEELKVALKTASNI 194
Cdd:smart00255 81 ENALEEgGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKE-QFWKKALYAVPSK 140
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
611-882 |
6.71e-21 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 96.93 E-value: 6.71e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 611 KELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSLdllgsvKQMNELIYLNLRDc 690
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEEL------SNLTNLESLDLSG- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 691 TSLESLPKGF-KIKSLKTLILSGClKLKDfhiISESI------ESLHLEGTAIERVVEHIESLHSLILLNLKNCeKLKYL 763
Cdd:COG4886 123 NQLTDLPEELaNLTNLKELDLSNN-QLTD---LPEPLgnltnlKSLDLSNNQLTDLPEELGNLTNLKELDLSNN-QITDL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 764 PNDLYKLKSLQELVLSGCsALESLPPIKEKMECLEILLMDGTSIKQTPEMSCLSNLKIcsfcrpviddstglvvlpfsgn 843
Cdd:COG4886 198 PEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEE---------------------- 254
|
250 260 270
....*....|....*....|....*....|....*....
gi 1063723654 844 sflsdLYLTNCNIDKLPdKFSSLRSLRCLCLSRNNIETL 882
Cdd:COG4886 255 -----LDLSNNQLTDLP-PLANLTNLKTLDLSNNQLTDL 287
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
633-920 |
2.53e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.51 E-value: 2.53e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 633 TESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKGFKI---KSLKTLI 709
Cdd:COG4886 23 TLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLgdlTNLTELD 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 710 LSGCLKLKDFhiisESIESLHLEGTAIERVVEHIESLHSLILLNLKNCeKLKYLPNDLYKLKSLQELVLSGCSaLESLPP 789
Cdd:COG4886 103 LSGNEELSNL----TNLESLDLSGNQLTDLPEELANLTNLKELDLSNN-QLTDLPEPLGNLTNLKSLDLSNNQ-LTDLPE 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 790 ikekmecleillmdgtsikqtpEMSCLSNLKIcsfcrpviddstglvvlpfsgnsflsdLYLTNCNIDKLPDKFSSLRSL 869
Cdd:COG4886 177 ----------------------ELGNLTNLKE---------------------------LDLSNNQITDLPEPLGNLTNL 207
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1063723654 870 RCLCLSRNNIETLPESIEKLYSLLLLDLKHcCRLKSLPLLP--SNLQYLDAHG 920
Cdd:COG4886 208 EELDLSGNQLTDLPEPLANLTNLETLDLSN-NQLTDLPELGnlTNLEELDLSN 259
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
59-149 |
1.16e-12 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 65.80 E-value: 1.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 59 VFVSFRGADtrHDFTSHLVKYLRGKGIDVFSDAK--LRGGEYISLLFDRIEQSKMSIVVFSEDYANSWWCLEEVGkIMQR 136
Cdd:pfam13676 1 VFISYAGED--RAWAEWLADALEAAGYRVWLDRWdiRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWE-AALA 77
|
90
....*....|...
gi 1063723654 137 RKEFNHGVLPIFY 149
Cdd:pfam13676 78 DPEGRKRLIPVRL 90
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
238-468 |
8.40e-12 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 66.63 E-value: 8.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 238 RSKELEKLL--MFDNDEcVRVVGVLGMTGIGKTTVADIVYKQNFQ---RFDGYEFLEDiednSKRYGLPYLYQ---KLLH 309
Cdd:pfam00931 1 REDMVEKVIgkLSEKDE-PGIVGIHGMGGVGKTTLAAQIFNDFDEvegHFDSVAWVVV----SKTFTISTLQQtilQNLG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 310 KLLDGENV--DVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKKNVYRQGSRIVIITRDKKlLQKNADATYVVPR-- 385
Cdd:pfam00931 76 LSEDDWDNkeEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEE-VAGRVGGPSDPHEve 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 386 -LNDREAMELFCLQVF-GNHYPTEEFVDLSNDFVCYAKGLPLALKLLGKGLLT-HDINYWKKKLEFLQVNPdKELQKELK 462
Cdd:pfam00931 155 lLEPDEAWELFENKVFpKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCkKTVEEWKHVYDVLQSEL-KSNSYSLN 233
|
....*.
gi 1063723654 463 SSYKAL 468
Cdd:pfam00931 234 SVRSIL 239
|
|
| C-JID |
pfam20160 |
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron ... |
993-1090 |
8.47e-11 |
|
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron microscopy (cryoEM) structures of plant intracellular immune receptors containing Toll/interleukin-1 receptor (TIR, PF01582), nucleotide-binding (NB-ARC, PF00931) and leucine-rich repeat (LRR) domains (TIR-NLRs). Structurally, the C-JID core is represented by a beta-sandwich made up of 8 to 9 beta-strands. C-JID matches the so-called post LRR domain originally detected via a set of MEME motifs. The domain showed a strong distribution bias towards TIR-NLRs of dicotyledonous plant species despite broader taxonomic distribution of TIR-NLR in plant groups. Structure-function analyses of cryoEM structures suggest that C-JID domains play a role in substrate-recognition, such as binding to effector proteins from pathogens, and thus are involved in the initiation of signaling by TIR-NLR receptors. Presence of C-JID (or post-LRR) and its importance for the function of Arabidopsis TIR-NLR RPS4 that partners with RRS1 for effector recognition suggest that C-JID has additional functions.
Pssm-ID: 466313 Cd Length: 108 Bit Score: 60.15 E-value: 8.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 993 FPGHDIPSWFSHQKMGSLIETDLLPHWCNSKFIGASLCVVVTFKDHEGHHANR----------LSVRCKSKFKSQNGQF- 1061
Cdd:pfam20160 1 LPGSQIPEWFNHQSTGSSISIKLPENWYNDNFLGFAVCAVGSLIPSLHNFLGYihffliplvsLWDTSKANGKTPNDYGr 80
|
90 100
....*....|....*....|....*....
gi 1063723654 1062 ISFSFClggwnesCGSSCHEPRKLGSDHV 1090
Cdd:pfam20160 81 IEASFE-------FPSDLHEIKQCGVRLI 102
|
|
| PLN03194 |
PLN03194 |
putative disease resistance protein; Provisional |
58-156 |
1.30e-08 |
|
putative disease resistance protein; Provisional
Pssm-ID: 215626 [Multi-domain] Cd Length: 187 Bit Score: 55.98 E-value: 1.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 58 DVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAK-LRGGEYislLFDRIE----QSKMSIVVFSEDYANSWWCLEEVGK 132
Cdd:PLN03194 28 DVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDNKnMKPGDK---LFDKINsairNCKVGVAVFSPRYCESYFCLHELAL 104
|
90 100
....*....|....*....|....
gi 1063723654 133 IMQRRKEfnhgVLPIFYKVSKSDV 156
Cdd:PLN03194 105 IMESKKR----VIPIFCDVKPSQL 124
|
|
| COG4916 |
COG4916 |
Uncharacterized conserved protein [Function unknown]; |
57-149 |
4.77e-08 |
|
Uncharacterized conserved protein [Function unknown];
Pssm-ID: 443944 [Multi-domain] Cd Length: 236 Bit Score: 55.12 E-value: 4.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 57 FDVFVSFRGADtRHdFTSHLVKYLRGKGIDVFSD----AKLRGGEyISLLFDRI--EQSKMSIVVFSEDYANSWWCLEE- 129
Cdd:COG4916 1 YDVALSFAGED-RE-FVERVAEALKARGIKVFYDeneeAELWGKD-LDEYLQDIyrSESRFVVVFLSKDYVEKKWTGLEr 77
|
90 100
....*....|....*....|...
gi 1063723654 130 ---VGKIMQRRKEFnhgVLPIFY 149
Cdd:COG4916 78 raaLARAMQRKKEY---ILPIRL 97
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
743-931 |
5.70e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 50.32 E-value: 5.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 743 IESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTpemscLSNLKIC 822
Cdd:COG4886 11 KLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLS-----LLLLSLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 823 SFCRPVIDDSTGLVVLPFSGNSFLSD------LYLTNCNIDKLPDKFSSLRSLRCLCLSRNNIETLPESieklyslllld 896
Cdd:COG4886 86 LLGLTDLGDLTNLTELDLSGNEELSNltnlesLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEP----------- 154
|
170 180 190
....*....|....*....|....*....|....*
gi 1063723654 897 lkhccrLKSLPllpsNLQYLDAHGCGsLENVSKPL 931
Cdd:COG4886 155 ------LGNLT----NLKSLDLSNNQ-LTDLPEEL 178
|
|
| PRK15386 |
PRK15386 |
type III secretion effector GogB; |
742-869 |
5.21e-03 |
|
type III secretion effector GogB;
Pssm-ID: 237954 [Multi-domain] Cd Length: 426 Bit Score: 40.62 E-value: 5.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723654 742 HIESL----HSLILLNLKNCEKLKYLPNDL-YKLKSLQelvLSGCSALESLPPikeKMECLEILLMDGTSIKQTPE-MSC 815
Cdd:PRK15386 63 DIESLpvlpNELTEITIENCNNLTTLPGSIpEGLEKLT---VCHCPEISGLPE---SVRSLEIKGSATDSIKNVPNgLTS 136
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1063723654 816 LSNLKICSFCRPVIDDstglvVLPFSgnsfLSDLYLTNCNIDKLPDKF-SSLRSL 869
Cdd:PRK15386 137 LSINSYNPENQARIDN-----LISPS----LKTLSLTGCSNIILPEKLpESLQSI 182
|
|
| LRR_3 |
pfam07725 |
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ... |
613-631 |
5.31e-03 |
|
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.
Pssm-ID: 429621 [Multi-domain] Cd Length: 20 Bit Score: 35.39 E-value: 5.31e-03
|
| |
