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Conserved domains on  [gi|1063723109|ref|NP_001328020|]
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Disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]

Protein Classification

disease resistance family protein( domain architecture ID 1000118)

disease resistance family protein similar to Nicotiana glutinosa TMV resistance protein N; resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein

Gene Ontology:  GO:0006952

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
 1-1258 0e+00

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 980.13  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109    1 MAASSSSGRR-RYDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAPELISAIREARISIVIFSKNYASS 79
Cdd:PLN03210     1 MASSSSSSRNwVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASS 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109   80 TWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEvskdKQPGDQKQRWVQALTDIANIAGEDLLN 159
Cdd:PLN03210    81 SWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQ----NKTEDEKIQWKQALTDVANILGYHSQN 156

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  160 GPNEAHMVEKISNDVSNKL-ITRSKCFDDFVGIEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFP 238
Cdd:PLN03210   157 WPNEAKMIEEIANDVLGKLnLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQ 236

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  239 L-----RAFLTyKSTSG-----SDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLV 308
Cdd:PLN03210   237 SsvfidRAFIS-KSMEIyssanPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALA 315

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  309 GKAEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVL 388
Cdd:PLN03210   316 GQTQWFGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVL 395

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  389 GSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRLH-QKDQDMFLCIACLFNGFEVSYVKDLLED-----NVGLTML 462
Cdd:PLN03210   396 GSYLRGRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANsdldvNIGLKNL 475

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  463 SEKSLIRITPDgHIEMHNLLEKLGREIDRAKSKgNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEyfsTRPLLID 542
Cdd:PLN03210   476 VDKSLIHVRED-IVEMHSLLQEMGKEIVRAQSN-EPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDE---IDELHIH 550

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  543 KESFKGMRNLQYLKIgdwsdggqpqslvYLPlklrllDWDdcplkslpstfkaeylvnlimkySKLEKLWEgtLPlgslk 622
Cdd:PLN03210   551 ENAFKGMRNLLFLKF-------------YTK------KWD-----------------------QKKEVRWH--LP----- 581

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  623 kmnllcsknlkeipdlsnarnleeldlegceslvtlpssiqnaiklrklhcsgvilidlkslegmcnleylsvdcsrveg 702
Cdd:PLN03210       --------------------------------------------------------------------------------

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  703 tQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLE 782
Cdd:PLN03210   582 -EGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLE 660

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  783 EVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFpegrNEIV 862
Cdd:PLN03210   661 TLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDL----DETA 736

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  863 VEDcfwnknlpagldyldclmrcMPCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMdLSESenlteipdlskatkLE 942
Cdd:PLN03210   737 IEE--------------------FPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTM-LSPS--------------LT 781

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  943 SLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVNLSSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEV 1022
Cdd:PLN03210   782 RLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEEV 861

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1023 PCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFADFTDCrgviKALSDatvvATMEDSVSCVPL-SENIEYTCErfw 1101
Cdd:PLN03210   862 PWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC----GALTE----ASWNGSPSEVAMaTDNIHSKLP--- 930

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1102 gelygdgdwdlGTEYFSFRNCFKLDRDAReLILRSCFKPVALPGGEIPKYFTYRAYGDSLT-VTLPRSSLSQSFLRFKAC 1180
Cdd:PLN03210   931 -----------STVCINFINCFNLDQEAL-LQQQSIFKQLILSGEEVPSYFTHRTTGASLTnIPLLHISPCQPFFRFRAC 998

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1181 LVVDPLSEGKG-FYRYLEVNFGFNGK--QYQKSFLEDEELEFCKTD-HL--FFCSFKFESEMT----FN----DVEFKFC 1246
Cdd:PLN03210   999 AVVDSESFFIIsVSFDIQVCCRFIDRlgNHFDSPYQPHVFSVTKKGsHLviFDCCFPLNEDNAplaeLNydhvDIQFRLT 1078

                         1290
                   ....*....|....*
gi 1063723109 1247 ---CSNRIKECGVRL 1258
Cdd:PLN03210  1079 nknSQLKLKGCGIRL 1093
LRR super family cl34836
Leucine-rich repeat (LRR) protein [Transcription];
540-696 1.70e-09

Leucine-rich repeat (LRR) protein [Transcription];


The actual alignment was detected with superfamily member COG4886:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 61.49  E-value: 1.70e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  540 LIDKESFKGMRNLQYLKIGDWSDGGQPQSLVYLPlKLRLLDWDDCPLKSLPSTFKA-EYLVNLIMKYSKLEKLwegTLPL 618
Cdd:COG4886    103 LSGNEELSNLTNLESLDLSGNQLTDLPEELANLT-NLKELDLSNNQLTDLPEPLGNlTNLKSLDLSNNQLTDL---PEEL 178

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  619 GSLKKM-NLLCSKN-LKEIPD-LSNARNLEELDLEGCEsLVTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSV 695
Cdd:COG4886    179 GNLTNLkELDLSNNqITDLPEpLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEELDL 257


                   .
gi 1063723109  696 D 696
Cdd:COG4886    258 S 258
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1-1258 0e+00

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 980.13  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109    1 MAASSSSGRR-RYDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAPELISAIREARISIVIFSKNYASS 79
Cdd:PLN03210     1 MASSSSSSRNwVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASS 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109   80 TWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEvskdKQPGDQKQRWVQALTDIANIAGEDLLN 159
Cdd:PLN03210    81 SWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQ----NKTEDEKIQWKQALTDVANILGYHSQN 156

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  160 GPNEAHMVEKISNDVSNKL-ITRSKCFDDFVGIEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFP 238
Cdd:PLN03210   157 WPNEAKMIEEIANDVLGKLnLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQ 236

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  239 L-----RAFLTyKSTSG-----SDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLV 308
Cdd:PLN03210   237 SsvfidRAFIS-KSMEIyssanPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALA 315

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  309 GKAEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVL 388
Cdd:PLN03210   316 GQTQWFGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVL 395

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  389 GSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRLH-QKDQDMFLCIACLFNGFEVSYVKDLLED-----NVGLTML 462
Cdd:PLN03210   396 GSYLRGRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANsdldvNIGLKNL 475

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  463 SEKSLIRITPDgHIEMHNLLEKLGREIDRAKSKgNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEyfsTRPLLID 542
Cdd:PLN03210   476 VDKSLIHVRED-IVEMHSLLQEMGKEIVRAQSN-EPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDE---IDELHIH 550

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  543 KESFKGMRNLQYLKIgdwsdggqpqslvYLPlklrllDWDdcplkslpstfkaeylvnlimkySKLEKLWEgtLPlgslk 622
Cdd:PLN03210   551 ENAFKGMRNLLFLKF-------------YTK------KWD-----------------------QKKEVRWH--LP----- 581

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  623 kmnllcsknlkeipdlsnarnleeldlegceslvtlpssiqnaiklrklhcsgvilidlkslegmcnleylsvdcsrveg 702
Cdd:PLN03210       --------------------------------------------------------------------------------

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  703 tQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLE 782
Cdd:PLN03210   582 -EGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLE 660

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  783 EVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFpegrNEIV 862
Cdd:PLN03210   661 TLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDL----DETA 736

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  863 VEDcfwnknlpagldyldclmrcMPCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMdLSESenlteipdlskatkLE 942
Cdd:PLN03210   737 IEE--------------------FPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTM-LSPS--------------LT 781

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  943 SLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVNLSSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEV 1022
Cdd:PLN03210   782 RLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEEV 861

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1023 PCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFADFTDCrgviKALSDatvvATMEDSVSCVPL-SENIEYTCErfw 1101
Cdd:PLN03210   862 PWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC----GALTE----ASWNGSPSEVAMaTDNIHSKLP--- 930

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1102 gelygdgdwdlGTEYFSFRNCFKLDRDAReLILRSCFKPVALPGGEIPKYFTYRAYGDSLT-VTLPRSSLSQSFLRFKAC 1180
Cdd:PLN03210   931 -----------STVCINFINCFNLDQEAL-LQQQSIFKQLILSGEEVPSYFTHRTTGASLTnIPLLHISPCQPFFRFRAC 998

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1181 LVVDPLSEGKG-FYRYLEVNFGFNGK--QYQKSFLEDEELEFCKTD-HL--FFCSFKFESEMT----FN----DVEFKFC 1246
Cdd:PLN03210   999 AVVDSESFFIIsVSFDIQVCCRFIDRlgNHFDSPYQPHVFSVTKKGsHLviFDCCFPLNEDNAplaeLNydhvDIQFRLT 1078

                         1290
                   ....*....|....*
gi 1063723109 1247 ---CSNRIKECGVRL 1258
Cdd:PLN03210  1079 nknSQLKLKGCGIRL 1093
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 12-178 9.98e-60

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 202.21  E-value: 9.98e-60
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109   12 YDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDH-GIERSRTIAPELISAIREARISIVIFSKNYASSTWCLNELVEIH 90
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDrDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109   91 KCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEVSKDkqpgDQKQRWVQALTDIANIagEDLLNGPNEAHMVEKI 170
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTE----EKVLKWRGALNEVANI--WHSKSVSDESKFWKKI 154


                   ....*...
gi 1063723109  171 SNDVSNKL 178
Cdd:pfam01582  155 AYDISNKL 162
TIR smart00255
Toll - interleukin 1 - resistance;
11-152 1.27e-42

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 152.48  E-value: 1.27e-42
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109    11 RYDVFPSFSGV-DVRKTFLSHLIEALDGKSINTFIDHGIERSRtIAPELISAIREARISIVIFSKNYASSTWCLNELVEI 89
Cdd:smart00255    1 EYDVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGG-DLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063723109    90 HKC-FNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEVSKDKqpgDQKQRWVQALTDIANI 152
Cdd:smart00255   80 LENaLEEGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPED---EKEQFWKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
910-1065 1.11e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 78.05  E-value: 1.11e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  910 EGIQSLGSLEEMDLSESeNLTEIPD-LSKATKLESLILNNCKsLVTLPSTIGNLQNLRRLYMKRCtGLEVLPTDV-NLSS 987
Cdd:COG4886    107 EELSNLTNLESLDLSGN-QLTDLPEeLANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNN-QLTDLPEELgNLTN 183

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  988 LGILDLSGCSsLRTFPL-IS--TNIVWLYLENTAIGEVPCCIEDFTRLRVL-LMYCcqRLKNIsPNIFRLRSLMFADFTD 1063
Cdd:COG4886    184 LKELDLSNNQ-ITDLPEpLGnlTNLEELDLSGNQLTDLPEPLANLTNLETLdLSNN--QLTDL-PELGNLTNLEELDLSN 259


                   ..
gi 1063723109 1064 CR 1065
Cdd:COG4886    260 NQ 261
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
540-696 1.70e-09

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 61.49  E-value: 1.70e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  540 LIDKESFKGMRNLQYLKIGDWSDGGQPQSLVYLPlKLRLLDWDDCPLKSLPSTFKA-EYLVNLIMKYSKLEKLwegTLPL 618
Cdd:COG4886    103 LSGNEELSNLTNLESLDLSGNQLTDLPEELANLT-NLKELDLSNNQLTDLPEPLGNlTNLKSLDLSNNQLTDL---PEEL 178

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  619 GSLKKM-NLLCSKN-LKEIPD-LSNARNLEELDLEGCEsLVTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSV 695
Cdd:COG4886    179 GNLTNLkELDLSNNqITDLPEpLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEELDL 257


                   .
gi 1063723109  696 D 696
Cdd:COG4886    258 S 258
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1-1258 0e+00

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 980.13  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109    1 MAASSSSGRR-RYDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAPELISAIREARISIVIFSKNYASS 79
Cdd:PLN03210     1 MASSSSSSRNwVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASS 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109   80 TWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEvskdKQPGDQKQRWVQALTDIANIAGEDLLN 159
Cdd:PLN03210    81 SWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQ----NKTEDEKIQWKQALTDVANILGYHSQN 156

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  160 GPNEAHMVEKISNDVSNKL-ITRSKCFDDFVGIEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFP 238
Cdd:PLN03210   157 WPNEAKMIEEIANDVLGKLnLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQ 236

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  239 L-----RAFLTyKSTSG-----SDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLV 308
Cdd:PLN03210   237 SsvfidRAFIS-KSMEIyssanPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALA 315

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  309 GKAEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVL 388
Cdd:PLN03210   316 GQTQWFGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVL 395

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  389 GSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRLH-QKDQDMFLCIACLFNGFEVSYVKDLLED-----NVGLTML 462
Cdd:PLN03210   396 GSYLRGRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANsdldvNIGLKNL 475

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  463 SEKSLIRITPDgHIEMHNLLEKLGREIDRAKSKgNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEyfsTRPLLID 542
Cdd:PLN03210   476 VDKSLIHVRED-IVEMHSLLQEMGKEIVRAQSN-EPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDE---IDELHIH 550

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  543 KESFKGMRNLQYLKIgdwsdggqpqslvYLPlklrllDWDdcplkslpstfkaeylvnlimkySKLEKLWEgtLPlgslk 622
Cdd:PLN03210   551 ENAFKGMRNLLFLKF-------------YTK------KWD-----------------------QKKEVRWH--LP----- 581

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  623 kmnllcsknlkeipdlsnarnleeldlegceslvtlpssiqnaiklrklhcsgvilidlkslegmcnleylsvdcsrveg 702
Cdd:PLN03210       --------------------------------------------------------------------------------

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  703 tQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLE 782
Cdd:PLN03210   582 -EGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLE 660

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  783 EVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFpegrNEIV 862
Cdd:PLN03210   661 TLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDL----DETA 736

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  863 VEDcfwnknlpagldyldclmrcMPCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMdLSESenlteipdlskatkLE 942
Cdd:PLN03210   737 IEE--------------------FPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTM-LSPS--------------LT 781

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  943 SLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVNLSSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEV 1022
Cdd:PLN03210   782 RLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEEV 861

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1023 PCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFADFTDCrgviKALSDatvvATMEDSVSCVPL-SENIEYTCErfw 1101
Cdd:PLN03210   862 PWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC----GALTE----ASWNGSPSEVAMaTDNIHSKLP--- 930

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1102 gelygdgdwdlGTEYFSFRNCFKLDRDAReLILRSCFKPVALPGGEIPKYFTYRAYGDSLT-VTLPRSSLSQSFLRFKAC 1180
Cdd:PLN03210   931 -----------STVCINFINCFNLDQEAL-LQQQSIFKQLILSGEEVPSYFTHRTTGASLTnIPLLHISPCQPFFRFRAC 998

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1181 LVVDPLSEGKG-FYRYLEVNFGFNGK--QYQKSFLEDEELEFCKTD-HL--FFCSFKFESEMT----FN----DVEFKFC 1246
Cdd:PLN03210   999 AVVDSESFFIIsVSFDIQVCCRFIDRlgNHFDSPYQPHVFSVTKKGsHLviFDCCFPLNEDNAplaeLNydhvDIQFRLT 1078

                         1290
                   ....*....|....*
gi 1063723109 1247 ---CSNRIKECGVRL 1258
Cdd:PLN03210  1079 nknSQLKLKGCGIRL 1093
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 12-178 9.98e-60

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 202.21  E-value: 9.98e-60
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109   12 YDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDH-GIERSRTIAPELISAIREARISIVIFSKNYASSTWCLNELVEIH 90
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDrDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109   91 KCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEVSKDkqpgDQKQRWVQALTDIANIagEDLLNGPNEAHMVEKI 170
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTE----EKVLKWRGALNEVANI--WHSKSVSDESKFWKKI 154


                   ....*...
gi 1063723109  171 SNDVSNKL 178
Cdd:pfam01582  155 AYDISNKL 162
TIR smart00255
Toll - interleukin 1 - resistance;
11-152 1.27e-42

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 152.48  E-value: 1.27e-42
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109    11 RYDVFPSFSGV-DVRKTFLSHLIEALDGKSINTFIDHGIERSRtIAPELISAIREARISIVIFSKNYASSTWCLNELVEI 89
Cdd:smart00255    1 EYDVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGG-DLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063723109    90 HKC-FNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEVSKDKqpgDQKQRWVQALTDIANI 152
Cdd:smart00255   80 LENaLEEGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPED---EKEQFWKKALYAVPSK 140
NB-ARC pfam00931
NB-ARC domain;
191-395 7.13e-15

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 75.88  E-value: 7.13e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  191 IEAHIEAIKSVLcLESKEARMVGIWGQSGIGKSTIGRALFSQLSI---QFPLRAFLtykSTSGSDVSG--MKLSWEKELL 265
Cdd:pfam00931    1 REDMVEKVIGKL-SEKDEPGIVGIHGMGGVGKTTLAAQIFNDFDEvegHFDSVAWV---VVSKTFTIStlQQTILQNLGL 76

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  266 SEilGQKDIKIEHFGVVEQR--LKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQDRQFLKAH-DIDLVYEVK 342
Cdd:pfam00931   77 SE--DDWDNKEEGELARKIRraLLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVgGPSDPHEVE 154

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1063723109  343 LPSQGLALTMLCRSAF-GKDSPPDDFKELAFEVAKLAGHLPLGLNVLGSSLRRR 395
Cdd:pfam00931  155 LLEPDEAWELFENKVFpKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCK 208
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
910-1065 1.11e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 78.05  E-value: 1.11e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  910 EGIQSLGSLEEMDLSESeNLTEIPD-LSKATKLESLILNNCKsLVTLPSTIGNLQNLRRLYMKRCtGLEVLPTDV-NLSS 987
Cdd:COG4886    107 EELSNLTNLESLDLSGN-QLTDLPEeLANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNN-QLTDLPEELgNLTN 183

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  988 LGILDLSGCSsLRTFPL-IS--TNIVWLYLENTAIGEVPCCIEDFTRLRVL-LMYCcqRLKNIsPNIFRLRSLMFADFTD 1063
Cdd:COG4886    184 LKELDLSNNQ-ITDLPEpLGnlTNLEELDLSGNQLTDLPEPLANLTNLETLdLSNN--QLTDL-PELGNLTNLEELDLSN 259


                   ..
gi 1063723109 1064 CR 1065
Cdd:COG4886    260 NQ 261
C-JID pfam20160
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron ...
 1143-1266 2.18e-13

C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron microscopy (cryoEM) structures of plant intracellular immune receptors containing Toll/interleukin-1 receptor (TIR, PF01582), nucleotide-binding (NB-ARC, PF00931) and leucine-rich repeat (LRR) domains (TIR-NLRs). Structurally, the C-JID core is represented by a beta-sandwich made up of 8 to 9 beta-strands. C-JID matches the so-called post LRR domain originally detected via a set of MEME motifs. The domain showed a strong distribution bias towards TIR-NLRs of dicotyledonous plant species despite broader taxonomic distribution of TIR-NLR in plant groups. Structure-function analyses of cryoEM structures suggest that C-JID domains play a role in substrate-recognition, such as binding to effector proteins from pathogens, and thus are involved in the initiation of signaling by TIR-NLR receptors. Presence of C-JID (or post-LRR) and its importance for the function of Arabidopsis TIR-NLR RPS4 that partners with RRS1 for effector recognition suggest that C-JID has additional functions.


Pssm-ID: 466313  Cd Length: 108  Bit Score: 67.47  E-value: 2.18e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1143 LPGGEIPKYFTYRAYGDSLTVTLPRSSLSQSFLRFKACLVVDPLSEGKGFYRYlevnfgfngkqyqksfledeeLEFCKT 1222
Cdd:pfam20160    1 LPGSQIPEWFNHQSTGSSISIKLPENWYNDNFLGFAVCAVGSLIPSLHNFLGY---------------------IHFFLI 59

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1063723109 1223 DHLFFCSFKFESEMTFND---VEFKFCCSN---RIKECGVRLMYvSQETE 1266
Cdd:pfam20160   60 PLVSLWDTSKANGKTPNDygrIEASFEFPSdlhEIKQCGVRLIY-KDEVE 108
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
568-837 3.89e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 69.96  E-value: 3.89e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  568 SLVYLPLKLRLLDWDDCPLKSLPSTFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEEL 647
Cdd:COG4886     39 LLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESL 118

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  648 DLEGCEsLVTLPSSIQNAIKLRKLHCSGVILIDL-KSLEGMCNLEYLSVDCSRVEGtqgivyFPSklrlllwnncPLKRL 726
Cdd:COG4886    119 DLSGNQ-LTDLPEELANLTNLKELDLSNNQLTDLpEPLGNLTNLKSLDLSNNQLTD------LPE----------ELGNL 181

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  727 HSnfkveyLVKLRMENSDLEKLwdgTQPLGRLKQM---FLRGSKyLKEIPD-LSLAINLEEVDICKCEsLVTFPsSMQNA 802
Cdd:COG4886    182 TN------LKELDLSNNQITDL---PEPLGNLTNLeelDLSGNQ-LTDLPEpLANLTNLETLDLSNNQ-LTDLP-ELGNL 249

                          250       260       270
                   ....*....|....*....|....*....|....*
gi 1063723109  803 IKLIYLDISDCkKLESFPTDLNLESLEYLNLTGCP 837
Cdd:COG4886    250 TNLEELDLSNN-QLTDLPPLANLTNLKTLDLSNNQ 283
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
615-1023 1.67e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 64.95  E-value: 1.67e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  615 TLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLS 694
Cdd:COG4886      1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  695 VDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRLHSnfkveyLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKyLKEIPD 774
Cdd:COG4886     81 LLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTN------LESLDLSGNQLTDLPEELANLTNLKELDLSNNQ-LTDLPE 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  775 -LSLAINLEEVDICKCEsLVTFPSSMQNAIKLIYLDISDCKkLESFPTDL-NLESLEYLNLTGcpnlrnfpaikmgcsdv 852
Cdd:COG4886    154 pLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKELDLSNNQ-ITDLPEPLgNLTNLEELDLSG----------------- 214

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  853 dfpegrNEIvvedcfwnKNLPagldyldclmrcmpcefrpeylvflnvrcykheklwEGIQSLGSLEEMDLSESeNLTEI 932
Cdd:COG4886    215 ------NQL--------TDLP------------------------------------EPLANLTNLETLDLSNN-QLTDL 243

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  933 PDLSKATKLESLILNNCKsLVTLPStIGNLQNLRRLYMKRC----TGLEVLPTDVNLSSLgILDLSGCSSLRTFPLISTN 1008
Cdd:COG4886    244 PELGNLTNLEELDLSNNQ-LTDLPP-LANLTNLKTLDLSNNqltdLKLKELELLLGLNSL-LLLLLLLNLLELLILLLLL 320

                          410
                   ....*....|....*
gi 1063723109 1009 IVWLYLENTAIGEVP 1023
Cdd:COG4886    321 TTLLLLLLLLKGLLV 335
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
 14-109 4.28e-10

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 58.48  E-value: 4.28e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109   14 VFPSFSGVDvrKTFLSHLIEALDGKSINTFIDHG-IERSRTIAPELISAIREARISIVIFSKNYASSTWCLNELVEIHKC 92
Cdd:pfam13676    1 VFISYAGED--RAWAEWLADALEAAGYRVWLDRWdIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALAD 78

                           90
                   ....*....|....*..
gi 1063723109   93 fNDLGQMVIPVFYDVDP 109
Cdd:pfam13676   79 -PEGRKRLIPVRLECDL 94
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
540-696 1.70e-09

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 61.49  E-value: 1.70e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  540 LIDKESFKGMRNLQYLKIGDWSDGGQPQSLVYLPlKLRLLDWDDCPLKSLPSTFKA-EYLVNLIMKYSKLEKLwegTLPL 618
Cdd:COG4886    103 LSGNEELSNLTNLESLDLSGNQLTDLPEELANLT-NLKELDLSNNQLTDLPEPLGNlTNLKSLDLSNNQLTDL---PEEL 178

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  619 GSLKKM-NLLCSKN-LKEIPD-LSNARNLEELDLEGCEsLVTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSV 695
Cdd:COG4886    179 GNLTNLkELDLSNNqITDLPEpLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEELDL 257


                   .
gi 1063723109  696 D 696
Cdd:COG4886    258 S 258
PLN03194 PLN03194
putative disease resistance protein; Provisional
 4-113 4.33e-09

putative disease resistance protein; Provisional


Pssm-ID: 215626 [Multi-domain]  Cd Length: 187  Bit Score: 57.52  E-value: 4.33e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109    4 SSSSGRRRYDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDhgierSRTIAP------ELISAIREARISIVIFSKNYA 77
Cdd:PLN03194    19 SSSSSAKPCDVFINHRGIDTKRTIATLLYDHLSRLNLRPFLD-----NKNMKPgdklfdKINSAIRNCKVGVAVFSPRYC 93

                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 1063723109   78 SSTWCLNELVEIHKCfndlGQMVIPVFYDVDPSEVR 113
Cdd:PLN03194    94 ESYFCLHELALIMES----KKRVIPIFCDVKPSQLR 125
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
544-704 1.63e-08

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 58.41  E-value: 1.63e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  544 ESFKGMRNLQYLKIgdwsDGGQ----PQSLVYLPlKLRLLDWDDCPLKSLPSTFKA-EYLVNLIMKYSKLEKLwegTLPL 618
Cdd:COG4886    130 EELANLTNLKELDL----SNNQltdlPEPLGNLT-NLKSLDLSNNQLTDLPEELGNlTNLKELDLSNNQITDL---PEPL 201

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  619 GSLKKMN-LLCSKN-LKEIPD-LSNARNLEELDLEGCEsLVTLPSsIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSV 695
Cdd:COG4886    202 GNLTNLEeLDLSGNqLTDLPEpLANLTNLETLDLSNNQ-LTDLPE-LGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDL 279


                   ....*....
gi 1063723109  696 DCSRVEGTQ 704
Cdd:COG4886    280 SNNQLTDLK 288
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
869-1056 1.51e-06

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 52.24  E-value: 1.51e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  869 NKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESENLTEIPDLSKATKLESLILNN 948
Cdd:COG4886      2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  949 CKSLVTLPSTIGNLQNLRRLYMKRCTGLEvlptdvNLSSLGILDLSGCsSLRTFPL-IS--TNIVWLYLENTAIGEVPCC 1025
Cdd:COG4886     82 LSLLLLGLTDLGDLTNLTELDLSGNEELS------NLTNLESLDLSGN-QLTDLPEeLAnlTNLKELDLSNNQLTDLPEP 154

                          170       180       190
                   ....*....|....*....|....*....|.
gi 1063723109 1026 IEDFTRLRVLLMYCCQrLKNISPNIFRLRSL 1056
Cdd:COG4886    155 LGNLTNLKSLDLSNNQ-LTDLPEELGNLTNL 184
LRR_3 pfam07725
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ...
 597-615 4.00e-05

Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.


Pssm-ID: 429621 [Multi-domain]  Cd Length: 20  Bit Score: 41.56  E-value: 4.00e-05
                           10
                   ....*....|....*....
gi 1063723109  597 YLVNLIMKYSKLEKLWEGT 615
Cdd:pfam07725    1 NLVELNMPYSKLEKLWEGV 19
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 907-1063 1.29e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 46.38  E-value: 1.29e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  907 KLWEGIQSLGSLEEMDLSESENLTEIP-DLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-N 984
Cdd:PLN00113   155 EIPNDIGSFSSLKVLDLGGNVLVGKIPnSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIgG 234

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063723109  985 LSSLGILDLsgcsslrtfplistnivwlyLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFADFTD 1063
Cdd:PLN00113   235 LTSLNHLDL--------------------VYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSD 293
COG4916 COG4916
Uncharacterized conserved protein [Function unknown];
12-117 1.34e-04

Uncharacterized conserved protein [Function unknown];


Pssm-ID: 443944 [Multi-domain]  Cd Length: 236  Bit Score: 45.10  E-value: 1.34e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109   12 YDVFPSFSGVDvrKTFLSHLIEALDGKSINTFIDHGiERSRTIAPELISAI-----REARISIVIFSKNYASSTWCLNEL 86
Cdd:COG4916      1 YDVALSFAGED--REFVERVAEALKARGIKVFYDEN-EEAELWGKDLDEYLqdiyrSESRFVVVFLSKDYVEKKWTGLER 77

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1063723109   87 veihKCFNDLGQM-----VIPVFYD-VDPSEVRKQTG 117
Cdd:COG4916     78 ----RAALARAMQrkkeyILPIRLDdTEIPGILATIG 110
LRR_3 pfam07725
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ...
 894-913 3.07e-04

Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.


Pssm-ID: 429621 [Multi-domain]  Cd Length: 20  Bit Score: 38.86  E-value: 3.07e-04
                           10        20
                   ....*....|....*....|
gi 1063723109  894 YLVFLNVRCYKHEKLWEGIQ 913
Cdd:pfam07725    1 NLVELNMPYSKLEKLWEGVK 20
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
189-377 5.66e-04

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 44.41  E-value: 5.66e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  189 VGIEAHIEAIKSVLCLESKEARMVgIWGQSGIGKSTIGRALFSQLS-----------IQFPLRAFLTYKSTsgsdvsgmk 257
Cdd:COG5635    161 LNLLERIESLKRLELLEAKKKRLL-ILGEPGSGKTTLLRYLALELAeryldaedpipILIELRDLAEEASL--------- 230

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  258 lsweKELLSEILGQKDIKIEHFgvVEQRLKHKKVLILLDDVDnleflktlvgkaEWFGSGSRIIVITQDRQFLKAHdidl 337
Cdd:COG5635    231 ----EDLLAEALEKRGGEPEDA--LERLLRNGRLLLLLDGLD------------EVPDEADRDEVLNQLRRFLERY---- 288

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1063723109  338 vyevklPSQGLALTmlCRSAFGKDSPPDDFKElaFEVAKL 377
Cdd:COG5635    289 ------PKARVIIT--SRPEGYDSSELEGFEV--LELAPL 318
LRR_3 pfam07725
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ...
 734-753 6.03e-04

Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.


Pssm-ID: 429621 [Multi-domain]  Cd Length: 20  Bit Score: 38.09  E-value: 6.03e-04
                           10        20
                   ....*....|....*....|
gi 1063723109  734 YLVKLRMENSDLEKLWDGTQ 753
Cdd:pfam07725    1 NLVELNMPYSKLEKLWEGVK 20
AAA smart00382
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ...
 210-335 1.82e-03

ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.


Pssm-ID: 214640 [Multi-domain]  Cd Length: 148  Bit Score: 40.43  E-value: 1.82e-03
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109   210 RMVGIWGQSGIGKSTIGRALFSQLsiqfpLRAFLTYKSTSGSDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRL-KH 288
Cdd:smart00382    3 EVILIVGPPGSGKTTLARALAREL-----GPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLALALArKL 77

                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063723109   289 KKVLILLDDVDNL----------EFLKTLVGKAEWFGSGSRIIVITQDRQFLKAHDI 335
Cdd:smart00382   78 KPDVLILDEITSLldaeqealllLLEELRLLLLLKSEKNLTVILTTNDEKDLGPALL 134
AAA_22 pfam13401
AAA domain;
209-323 2.04e-03

AAA domain;


Pssm-ID: 379165 [Multi-domain]  Cd Length: 129  Bit Score: 39.63  E-value: 2.04e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  209 ARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSGSdvsgmklsweKELLSEILGQKDIKIEHFGVVEQRLKH 288
Cdd:pfam13401    5 AGILVLTGESGTGKTTLLRRLLEQLPEVRDSVVFVDLPSGTSP----------KDLLRALLRALGLPLSGRLSKEELLAA 74

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 1063723109  289 ---------KKVLILLDDVDNL--EFLKTLVGKAEWFGSGSRIIVI 323
Cdd:pfam13401   75 lqqlllalaVAVVLIIDEAQHLslEALEELRDLLNLSSKLLQLILV 120
AAA_16 pfam13191
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ...
 188-234 5.90e-03

AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.


Pssm-ID: 433025 [Multi-domain]  Cd Length: 167  Bit Score: 39.02  E-value: 5.90e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1063723109  188 FVGIEAHIEAIKSVLC-LESKEARMVGIWGQSGIGKSTIGRALFSQLS 234
Cdd:pfam13191    2 LVGREEELEQLLDALDrVRSGRPPSVLLTGEAGTGKTTLLRELLRALE 49
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 917-1057 7.02e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 40.99  E-value: 7.02e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063723109  917 SLEEMDLSESENLTEIPDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTdvnlsslgilDLSGC 996
Cdd:PLN00113   453 SLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPD----------ELSSC 522

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063723109  997 SSLRTFPLISTNIVwlylentaiGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLM 1057
Cdd:PLN00113   523 KKLVSLDLSHNQLS---------GQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLV 574
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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