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Conserved domains on  [gi|1063721946|ref|NP_001327962|]
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OSBP(oxysterol binding protein)-related protein 2B [Arabidopsis thaliana]

Protein Classification

oxysterol-binding protein-related protein( domain architecture ID 10352147)

oxysterol-binding protein-related protein is a lipid transporter involved in lipid counter-transport between the endoplasmic reticulum and the plasma membrane; similar to Arabidopsis thaliana oxysterol-binding protein-related proteins 2B and 1D

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Oxysterol_BP pfam01237
Oxysterol-binding protein;
323-671 6.87e-169

Oxysterol-binding protein;


:

Pssm-ID: 460126  Cd Length: 366  Bit Score: 488.21  E-value: 6.87e-169
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 323 SLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDQAYEygkSGKSLLRALNVAAFAVSGYASTEGRHCKP 402
Cdd:pfam01237   1 SLWSILKKNIGKDLSKITMPVFFNEPLSLLQRLAEDLEYSELLDKAAE---EDDPLERMLYVAAFAVSGYSSTRRRVKKP 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 403 FNPLLGETYEADFPEKGIRFFSEKVSHHPTVIACHCEGKGWKFWGDTNLRSKFWGRSIQLEPVGILTLEF-DDGEIFQWS 481
Cdd:pfam01237  78 FNPLLGETFELVRPDKGFRFIAEQVSHHPPISAFHAESKGWTFWGEIAPKSKFWGKSLEVNPEGTVHLTLkKTGEHYTWT 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 482 KVTTTIYNILLGKLYCDHHGIMKIRGNR-QYSCMLKFKEQSIL-DRNPHQVNGFVEDVTGKKAATVFGKWNDSLYYVAGD 559
Cdd:pfam01237 158 KPTTYVHNIIFGKLWVEHYGEMTITNHTtGYKAVLEFKPKGYFsSGRSNEVTGKVYDKNGKVLYTLSGKWNESLYIKDVS 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 560 GINKA------------SASLLWKATKAPPNvtRYNFTSFAMTLNElIPGLEEKLPPTDSRLRPDQRHLENGEYEKANEE 627
Cdd:pfam01237 238 TGKKSseddsveeqpdgESRLLWKAGPLPNA--YYGFTSFAVTLNE-LTDELGKLPPTDSRLRPDQRALENGDIDEAEEE 314
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063721946 628 KQRLERRQRMSRQIQESG---WRPRWFE-----PQGESESYKYTGGYWEARD 671
Cdd:pfam01237 315 KLRLEEKQRARRKEREEKgeeWKPRWFKkvkddPVTGEEYWKYKGGYWERRE 366
PH-like super family cl17171
Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like ...
28-162 1.78e-47

Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.


The actual alignment was detected with superfamily member cd13294:

Pssm-ID: 473070  Cd Length: 100  Bit Score: 162.66  E-value: 1.78e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  28 VAGILYKWTNYGKGWRSRWFLLRDGILSYSKIRRPENVnllspsddlrligdistdrllrmkscsgrsrrkhhKNIGIVH 107
Cdd:cd13294     1 VAGILYKWVNYGKGWRSRWFVLQDGVLSYYKVHGPDKV-----------------------------------KPSGEVH 45
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063721946 108 LKVSSYRESKSDHRKFYIFTATKTLHLRTDSRSDRAAWLQALASTRGIVPLQSIN 162
Cdd:cd13294    46 LKVSSIRESRSDDKKFYIFTGTKTLHLRAESREDRAAWLEALQAAKDMFPRMSLN 100
 
Name Accession Description Interval E-value
Oxysterol_BP pfam01237
Oxysterol-binding protein;
323-671 6.87e-169

Oxysterol-binding protein;


Pssm-ID: 460126  Cd Length: 366  Bit Score: 488.21  E-value: 6.87e-169
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 323 SLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDQAYEygkSGKSLLRALNVAAFAVSGYASTEGRHCKP 402
Cdd:pfam01237   1 SLWSILKKNIGKDLSKITMPVFFNEPLSLLQRLAEDLEYSELLDKAAE---EDDPLERMLYVAAFAVSGYSSTRRRVKKP 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 403 FNPLLGETYEADFPEKGIRFFSEKVSHHPTVIACHCEGKGWKFWGDTNLRSKFWGRSIQLEPVGILTLEF-DDGEIFQWS 481
Cdd:pfam01237  78 FNPLLGETFELVRPDKGFRFIAEQVSHHPPISAFHAESKGWTFWGEIAPKSKFWGKSLEVNPEGTVHLTLkKTGEHYTWT 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 482 KVTTTIYNILLGKLYCDHHGIMKIRGNR-QYSCMLKFKEQSIL-DRNPHQVNGFVEDVTGKKAATVFGKWNDSLYYVAGD 559
Cdd:pfam01237 158 KPTTYVHNIIFGKLWVEHYGEMTITNHTtGYKAVLEFKPKGYFsSGRSNEVTGKVYDKNGKVLYTLSGKWNESLYIKDVS 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 560 GINKA------------SASLLWKATKAPPNvtRYNFTSFAMTLNElIPGLEEKLPPTDSRLRPDQRHLENGEYEKANEE 627
Cdd:pfam01237 238 TGKKSseddsveeqpdgESRLLWKAGPLPNA--YYGFTSFAVTLNE-LTDELGKLPPTDSRLRPDQRALENGDIDEAEEE 314
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063721946 628 KQRLERRQRMSRQIQESG---WRPRWFE-----PQGESESYKYTGGYWEARD 671
Cdd:pfam01237 315 KLRLEEKQRARRKEREEKgeeWKPRWFKkvkddPVTGEEYWKYKGGYWERRE 366
PH_ORP_plant cd13294
Plant Oxysterol binding protein related protein Pleckstrin homology (PH) domain; Plant ORPs ...
28-162 1.78e-47

Plant Oxysterol binding protein related protein Pleckstrin homology (PH) domain; Plant ORPs contain a N-terminal PH domain and a C-terminal OSBP-related domain. Not much is known about its specific function in plants to date. Members here include: Arabidopsis, spruce, and petunia. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. In general OSBPs and ORPs have been found to be involved in the transport and metabolism of cholesterol and related lipids in eukaryotes. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. They are members of the oxysterol binding protein (OSBP) family which includes OSBP, OSBP-related proteins (ORP), Goodpasture antigen binding protein (GPBP), and Four phosphate adaptor protein 1 (FAPP1). They have a wide range of purported functions including sterol transport, cell cycle control, pollen development and vessicle transport from Golgi recognize both PI lipids and ARF proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 241448  Cd Length: 100  Bit Score: 162.66  E-value: 1.78e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  28 VAGILYKWTNYGKGWRSRWFLLRDGILSYSKIRRPENVnllspsddlrligdistdrllrmkscsgrsrrkhhKNIGIVH 107
Cdd:cd13294     1 VAGILYKWVNYGKGWRSRWFVLQDGVLSYYKVHGPDKV-----------------------------------KPSGEVH 45
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063721946 108 LKVSSYRESKSDHRKFYIFTATKTLHLRTDSRSDRAAWLQALASTRGIVPLQSIN 162
Cdd:cd13294    46 LKVSSIRESRSDDKKFYIFTGTKTLHLRAESREDRAAWLEALQAAKDMFPRMSLN 100
PH_11 pfam15413
Pleckstrin homology domain; This Pleckstrin homology domain is found in some fungal species.
33-149 8.15e-11

Pleckstrin homology domain; This Pleckstrin homology domain is found in some fungal species.


Pssm-ID: 405988  Cd Length: 105  Bit Score: 59.52  E-value: 8.15e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  33 YKWTNYGKGWRSRWF-LLRDGILSY---SKIRRPENVNLLSPSDDLRLIGDISTDRLLrmkscsgrsrrkhhknigivhl 108
Cdd:pfam15413   4 YLKKKGPKTWKHRWFaVLRNGVLFYyksEKMKVVKHVIVLSNYIVGKLGTDIISGALF---------------------- 61
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1063721946 109 KVSSYRESKSDHRKFYIFTATKTLHLRTDSRSDRAAWLQAL 149
Cdd:pfam15413  62 KIDNIRSETSDDLLLEISTETKIFFLYGDNNEETYEWVEAL 102
PH smart00233
Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The ...
30-149 3.10e-07

Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.


Pssm-ID: 214574 [Multi-domain]  Cd Length: 102  Bit Score: 49.08  E-value: 3.10e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946   30 GILYKWT-NYGKGWRSRWFLLRDGILSYSKIRrpenvnllspsddlrligdistdrllrmkscSGRSRRKHHKNIGIVHL 108
Cdd:smart00233   5 GWLYKKSgGGKKSWKKRYFVLFNSTLLYYKSK-------------------------------KDKKSYKPKGSIDLSGC 53
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1063721946  109 KVSSYRESKSDHRK--FYIFTAT-KTLHLRTDSRSDRAAWLQAL 149
Cdd:smart00233  54 TVREAPDPDSSKKPhcFEIKTSDrKTLLLQAESEEEREKWVEAL 97
 
Name Accession Description Interval E-value
Oxysterol_BP pfam01237
Oxysterol-binding protein;
323-671 6.87e-169

Oxysterol-binding protein;


Pssm-ID: 460126  Cd Length: 366  Bit Score: 488.21  E-value: 6.87e-169
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 323 SLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDQAYEygkSGKSLLRALNVAAFAVSGYASTEGRHCKP 402
Cdd:pfam01237   1 SLWSILKKNIGKDLSKITMPVFFNEPLSLLQRLAEDLEYSELLDKAAE---EDDPLERMLYVAAFAVSGYSSTRRRVKKP 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 403 FNPLLGETYEADFPEKGIRFFSEKVSHHPTVIACHCEGKGWKFWGDTNLRSKFWGRSIQLEPVGILTLEF-DDGEIFQWS 481
Cdd:pfam01237  78 FNPLLGETFELVRPDKGFRFIAEQVSHHPPISAFHAESKGWTFWGEIAPKSKFWGKSLEVNPEGTVHLTLkKTGEHYTWT 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 482 KVTTTIYNILLGKLYCDHHGIMKIRGNR-QYSCMLKFKEQSIL-DRNPHQVNGFVEDVTGKKAATVFGKWNDSLYYVAGD 559
Cdd:pfam01237 158 KPTTYVHNIIFGKLWVEHYGEMTITNHTtGYKAVLEFKPKGYFsSGRSNEVTGKVYDKNGKVLYTLSGKWNESLYIKDVS 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946 560 GINKA------------SASLLWKATKAPPNvtRYNFTSFAMTLNElIPGLEEKLPPTDSRLRPDQRHLENGEYEKANEE 627
Cdd:pfam01237 238 TGKKSseddsveeqpdgESRLLWKAGPLPNA--YYGFTSFAVTLNE-LTDELGKLPPTDSRLRPDQRALENGDIDEAEEE 314
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063721946 628 KQRLERRQRMSRQIQESG---WRPRWFE-----PQGESESYKYTGGYWEARD 671
Cdd:pfam01237 315 KLRLEEKQRARRKEREEKgeeWKPRWFKkvkddPVTGEEYWKYKGGYWERRE 366
PH_ORP_plant cd13294
Plant Oxysterol binding protein related protein Pleckstrin homology (PH) domain; Plant ORPs ...
28-162 1.78e-47

Plant Oxysterol binding protein related protein Pleckstrin homology (PH) domain; Plant ORPs contain a N-terminal PH domain and a C-terminal OSBP-related domain. Not much is known about its specific function in plants to date. Members here include: Arabidopsis, spruce, and petunia. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. In general OSBPs and ORPs have been found to be involved in the transport and metabolism of cholesterol and related lipids in eukaryotes. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. They are members of the oxysterol binding protein (OSBP) family which includes OSBP, OSBP-related proteins (ORP), Goodpasture antigen binding protein (GPBP), and Four phosphate adaptor protein 1 (FAPP1). They have a wide range of purported functions including sterol transport, cell cycle control, pollen development and vessicle transport from Golgi recognize both PI lipids and ARF proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 241448  Cd Length: 100  Bit Score: 162.66  E-value: 1.78e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  28 VAGILYKWTNYGKGWRSRWFLLRDGILSYSKIRRPENVnllspsddlrligdistdrllrmkscsgrsrrkhhKNIGIVH 107
Cdd:cd13294     1 VAGILYKWVNYGKGWRSRWFVLQDGVLSYYKVHGPDKV-----------------------------------KPSGEVH 45
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063721946 108 LKVSSYRESKSDHRKFYIFTATKTLHLRTDSRSDRAAWLQALASTRGIVPLQSIN 162
Cdd:cd13294    46 LKVSSIRESRSDDKKFYIFTGTKTLHLRAESREDRAAWLEALQAAKDMFPRMSLN 100
PH_FAPP1_FAPP2 cd01247
Four phosphate adaptor protein 1 and 2 Pleckstrin homology (PH) domain; Human FAPP1 (also ...
30-153 1.95e-12

Four phosphate adaptor protein 1 and 2 Pleckstrin homology (PH) domain; Human FAPP1 (also called PLEKHA3/Pleckstrin homology domain-containing, family A member 3) regulates secretory transport from the trans-Golgi network to the plasma membrane. It is recruited through binding of PH domain to phosphatidylinositol 4-phosphate (PtdIns(4)P) and a small GTPase ADP-ribosylation factor 1 (ARF1). These two binding sites have little overlap the FAPP1 PH domain to associate with both ligands simultaneously and independently. FAPP1 has a N-terminal PH domain followed by a short proline-rich region. FAPP1 is a member of the oxysterol binding protein (OSBP) family which includes OSBP, OSBP-related proteins (ORP), and Goodpasture antigen binding protein (GPBP). They have a wide range of purported functions including sterol transport, cell cycle control, pollen development and vessicle transport from Golgi recognize both PI lipids and ARF proteins. FAPP2 (also called PLEKHA8/Pleckstrin homology domain-containing, family A member 8), a member of the Glycolipid lipid transfer protein(GLTP) family has an N-terminal PH domain that targets the TGN and C-terminal GLTP domain. FAPP2 functions to traffic glucosylceramide (GlcCer) which is made in the Golgi. It's interaction with vesicle-associated membrane protein-associated protein (VAP) could be a means of regulation. Some FAPP2s share the FFAT-like motifs found in GLTP. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 269951  Cd Length: 100  Bit Score: 63.96  E-value: 1.95e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  30 GILYKWTNYGKGWRSRWFLLRDGILSYSKIRrpENVNLLSPSDdlrligdistdrlLRMKSCsgrsrrkhhkNIgIVHlk 109
Cdd:cd01247     3 GVLWKWTNYLSGWQPRWFVLDDGVLSYYKSQ--EEVNQGCKGS-------------VKMSVC----------EI-IVH-- 54
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1063721946 110 vssyresKSDHRKF-YIFTATKTLHLRTDSRSDRAAWLQALASTR 153
Cdd:cd01247    55 -------PTDPTRMdLIIPGEQHFYLKASSAAERQRWLVALGSAK 92
PH_11 pfam15413
Pleckstrin homology domain; This Pleckstrin homology domain is found in some fungal species.
33-149 8.15e-11

Pleckstrin homology domain; This Pleckstrin homology domain is found in some fungal species.


Pssm-ID: 405988  Cd Length: 105  Bit Score: 59.52  E-value: 8.15e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  33 YKWTNYGKGWRSRWF-LLRDGILSY---SKIRRPENVNLLSPSDDLRLIGDISTDRLLrmkscsgrsrrkhhknigivhl 108
Cdd:pfam15413   4 YLKKKGPKTWKHRWFaVLRNGVLFYyksEKMKVVKHVIVLSNYIVGKLGTDIISGALF---------------------- 61
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1063721946 109 KVSSYRESKSDHRKFYIFTATKTLHLRTDSRSDRAAWLQAL 149
Cdd:pfam15413  62 KIDNIRSETSDDLLLEISTETKIFFLYGDNNEETYEWVEAL 102
PH_GPBP cd13283
Goodpasture antigen binding protein Pleckstrin homology (PH) domain; The GPBP (also called ...
30-153 1.96e-10

Goodpasture antigen binding protein Pleckstrin homology (PH) domain; The GPBP (also called Collagen type IV alpha-3-binding protein/hCERT; START domain-containing protein 11/StARD11; StAR-related lipid transfer protein 11) is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen, which is commonly known as the goodpasture antigen. Its splice variant the ceramide transporter (CERT) mediates the cytosolic transport of ceramide. There have been additional splice variants identified, but all of them function as ceramide transport proteins. GPBP and CERT both contain an N-terminal PH domain, followed by a serine rich domain, and a C-terminal START domain. However, GPBP has an additional serine rich domain just upstream of its START domain. They are members of the oxysterol binding protein (OSBP) family which includes OSBP, OSBP-related proteins (ORP), Goodpasture antigen binding protein (GPBP), and Four phosphate adaptor protein 1 (FAPP1). They have a wide range of purported functions including sterol transport, cell cycle control, pollen development and vessicle transport from Golgi recognize both PI lipids and ARF proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270100 [Multi-domain]  Cd Length: 100  Bit Score: 58.07  E-value: 1.96e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  30 GILYKWTNYGKGWRSRWFLLRDGILSYSKirrpenvnllSPSDdlrligdistdrllrmKSCSGRsrrkhhkniGIVHLK 109
Cdd:cd13283     3 GVLSKWTNYIHGWQDRYFVLKDGTLSYYK----------SESE----------------KEYGCR---------GSISLS 47
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1063721946 110 VSSYRESKSDHRKFYIFTATKTLHLRTDSRSDRAAWLQALASTR 153
Cdd:cd13283    48 KAVIKPHEFDECRFDVSVNDSVWYLRAESPEERQRWIDALESHK 91
PH_Osh1p_Osh2p_yeast cd13292
Yeast oxysterol binding protein homologs 1 and 2 Pleckstrin homology (PH) domain; Yeast Osh1p ...
30-152 2.19e-10

Yeast oxysterol binding protein homologs 1 and 2 Pleckstrin homology (PH) domain; Yeast Osh1p is proposed to function in postsynthetic sterol regulation, piecemeal microautophagy of the nucleus, and cell polarity establishment. Yeast Osh2p is proposed to function in sterol metabolism and cell polarity establishment. Both Osh1p and Osh2p contain 3 N-terminal ankyrin repeats, a PH domain, a FFAT motif (two phenylalanines in an acidic tract), and a C-terminal OSBP-related domain. OSBP andOsh1p PH domains specifically localize to the Golgi apparatus in a PtdIns4P-dependent manner. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. In general OSBPs and ORPs have been found to be involved in the transport and metabolism of cholesterol and related lipids in eukaryotes. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. They are members of the oxysterol binding protein (OSBP) family which includes OSBP, OSBP-related proteins (ORP), Goodpasture antigen binding protein (GPBP), and Four phosphate adaptor protein 1 (FAPP1). They have a wide range of purported functions including sterol transport, cell cycle control, pollen development and vessicle transport from Golgi recognize both PI lipids and ARF proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 241446  Cd Length: 103  Bit Score: 58.09  E-value: 2.19e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  30 GILYKWTNYGKGWRSRWFLLRDGILSYSKIRRPENVnllspsddlrligdistdrllrmkscsgRSRrkhhkniGIVHLK 109
Cdd:cd13292     6 GYLKKWTNYAKGYKTRWFVLEDGVLSYYRHQDDEGS----------------------------ACR-------GSINMK 50
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1063721946 110 VSSYRESKSDHRKFYIFTATKT---LHLRTDSRSDRAAWLQALAST 152
Cdd:cd13292    51 NARLVSDPSEKLRFEVSSKTSGspkWYLKANHPVEAARWIQALQKA 96
PH_CpORP2-like cd13293
Cryptosporidium-like Oxysterol binding protein related protein 2 Pleckstrin homology (PH) ...
30-149 2.50e-10

Cryptosporidium-like Oxysterol binding protein related protein 2 Pleckstrin homology (PH) domain; There are 2 types of ORPs found in Cryptosporidium: CpORP1 and CpORP2. Cryptosporium differs from other apicomplexans like Plasmodium, Toxoplasma, and Eimeria which possess only a single long-type ORP consisting of an N-terminal PH domain followed by a C-terminal ligand binding (LB) domain. CpORP2 is like this, but CpORP1 differs and has a truncated N-terminus resulting in only having a LB domain present. The exact functions of these proteins are largely unknown though CpORP1 is thought to be involved in lipid transport across the parasitophorous vacuole membrane. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. In general OSBPs and ORPs have been found to be involved in the transport and metabolism of cholesterol and related lipids in eukaryotes. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. They are members of the oxysterol binding protein (OSBP) family which includes OSBP, OSBP-related proteins (ORP), Goodpasture antigen binding protein (GPBP), and Four phosphate adaptor protein 1 (FAPP1). They have a wide range of purported functions including sterol transport, cell cycle control, pollen development and vessicle transport from Golgi recognize both PI lipids and ARF proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 241447  Cd Length: 88  Bit Score: 57.34  E-value: 2.50e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  30 GILYKWTNYGKGWRSRWFLLRDGILSYSKirrpenvnllspsddlrligdistdrllrmkscSGRSRRKhhkniGIVHLK 109
Cdd:cd13293     3 GYLKKWTNIFNSWKPRYFILYPGILCYSK---------------------------------QKGGPKK-----GTIHLK 44
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1063721946 110 VSSYRESKSDHRKFYIFTATKTLHLRTDSRSDRAAWLQAL 149
Cdd:cd13293    45 ICDIRLVPDDPLRIIINTGTNQLHLRASSVEEKLKWYNAL 84
PH_OSBP_ORP4 cd13284
Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain; ...
30-160 1.22e-08

Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain; Human OSBP is proposed to function is sterol-dependent regulation of ERK dephosphorylation and sphingomyelin synthesis as well as modulation of insulin signaling and hepatic lipogenesis. It contains a N-terminal PH domain, a FFAT motif (two phenylalanines in an acidic tract), and a C-terminal OSBP-related domain. OSBPs and Osh1p PH domains specifically localize to the Golgi apparatus in a PtdIns4P-dependent manner. ORP4 is proposed to function in Vimentin-dependent sterol transport and/or signaling. Human ORP4 has 2 forms, a long (ORP4L) and a short (ORP4S). ORP4L contains a N-terminal PH domain, a FFAT motif (two phenylalanines in an acidic tract), and a C-terminal OSBP-related domain. ORP4S is truncated and contains only an OSBP-related domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. They are members of the oxysterol binding protein (OSBP) family which includes OSBP, OSBP-related proteins (ORP), Goodpasture antigen binding protein (GPBP), and Four phosphate adaptor protein 1 (FAPP1). They have a wide range of purported functions including sterol transport, cell cycle control, pollen development and vessicle transport from Golgi recognize both PI lipids and ARF proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270101  Cd Length: 99  Bit Score: 52.77  E-value: 1.22e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  30 GILYKWTNYGKGWRSRWFLLRDGILSYskIRRPENVNllspsddlrligdistdrllrmKSCSGRsrrkhhknigivhLK 109
Cdd:cd13284     3 GWLLKWTNYIKGYQRRWFVLSNGLLSY--YRNQAEMA----------------------HTCRGT-------------IN 45
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063721946 110 VSSYRESKSDHRKFYIFTATK-TLHLRTDSRSDRAAWLQAL--ASTRGIVPLQS 160
Cdd:cd13284    46 LAGAEIHTEDSCNFVISNGGTqTFHLKASSEVERQRWVTALelAKAKAIRLLES 99
PH1_PH_fungal cd13298
Fungal proteins Pleckstrin homology (PH) domain, repeat 1; The functions of these fungal ...
29-160 1.28e-07

Fungal proteins Pleckstrin homology (PH) domain, repeat 1; The functions of these fungal proteins are unknown, but they all contain 2 PH domains. This cd represents the first PH repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270110  Cd Length: 106  Bit Score: 50.32  E-value: 1.28e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  29 AGILYKWTNYGKGWRSRWFLLRDGILSYSKirrpenvnllsPSDDLRLIGDISTDRLlrmkscsgrsrrkhhknigivhL 108
Cdd:cd13298     9 SGYLLKRSRKTKNWKKRWVVLRPCQLSYYK-----------DEKEYKLRRVINLSEL----------------------L 55
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063721946 109 KVSSYRESKSDHrKFYIFTATKTLHLRTDSRSDRAAWLQALASTRGIVPLQS 160
Cdd:cd13298    56 AVAPLKDKKRKN-VFGIYTPSKNLHFRATSEKDANEWVEALREEFRLDDEEE 106
PH smart00233
Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The ...
30-149 3.10e-07

Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.


Pssm-ID: 214574 [Multi-domain]  Cd Length: 102  Bit Score: 49.08  E-value: 3.10e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946   30 GILYKWT-NYGKGWRSRWFLLRDGILSYSKIRrpenvnllspsddlrligdistdrllrmkscSGRSRRKHHKNIGIVHL 108
Cdd:smart00233   5 GWLYKKSgGGKKSWKKRYFVLFNSTLLYYKSK-------------------------------KDKKSYKPKGSIDLSGC 53
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1063721946  109 KVSSYRESKSDHRK--FYIFTAT-KTLHLRTDSRSDRAAWLQAL 149
Cdd:smart00233  54 TVREAPDPDSSKKPhcFEIKTSDrKTLLLQAESEEEREKWVEAL 97
PH cd00821
Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are ...
29-149 4.01e-07

Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 275388 [Multi-domain]  Cd Length: 92  Bit Score: 48.31  E-value: 4.01e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  29 AGILYKWTNYG-KGWRSRWFLLRDGILSYSKIRrpenvnllsPSDDLRLIGDISTDRLLRMKSCSgrsrrkhhknigivh 107
Cdd:cd00821     2 EGYLLKRGGGGlKSWKKRWFVLFEGVLLYYKSK---------KDSSYKPKGSIPLSGILEVEEVS--------------- 57
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1063721946 108 lkvssyreSKSDHRKFYIFTAT-KTLHLRTDSRSDRAAWLQAL 149
Cdd:cd00821    58 --------PKERPHCFELVTPDgRTYYLQADSEEERQEWLKAL 92
PH_ACAP cd13250
ArfGAP with coiled-coil, ankyrin repeat and PH domains Pleckstrin homology (PH) domain; ACAP ...
30-152 3.53e-06

ArfGAP with coiled-coil, ankyrin repeat and PH domains Pleckstrin homology (PH) domain; ACAP (also called centaurin beta) functions both as a Rab35 effector and as an Arf6-GTPase-activating protein (GAP) by which it controls actin remodeling and membrane trafficking. ACAP contain an NH2-terminal bin/amphiphysin/Rvs (BAR) domain, a phospholipid-binding domain, a PH domain, a GAP domain, and four ankyrin repeats. The AZAPs constitute a family of Arf GAPs that are characterized by an NH2-terminal pleckstrin homology (PH) domain and a central Arf GAP domain followed by two or more ankyrin repeats. On the basis of sequence and domain organization, the AZAP family is further subdivided into four subfamilies: 1) the ACAPs contain an NH2-terminal bin/amphiphysin/Rvs (BAR) domain (a phospholipid-binding domain that is thought to sense membrane curvature), a single PH domain followed by the GAP domain, and four ankyrin repeats; 2) the ASAPs also contain an NH2-terminal BAR domain, the tandem PH domain/GAP domain, three ankyrin repeats, two proline-rich regions, and a COOH-terminal Src homology 3 domain; 3) the AGAPs contain an NH2-terminal GTPase-like domain (GLD), a split PH domain, and the GAP domain followed by four ankyrin repeats; and 4) the ARAPs contain both an Arf GAP domain and a Rho GAP domain, as well as an NH2-terminal sterile-a motif (SAM), a proline-rich region, a GTPase-binding domain, and five PH domains. PMID 18003747 and 19055940 Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270070  Cd Length: 98  Bit Score: 46.06  E-value: 3.53e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  30 GILYKWTNYG-KGWRSRWFLLRDGILSYSKirRPENVNLLSPSDDLRLigdistdrllrmkscsgrsrrkhhknigivhl 108
Cdd:cd13250     3 GYLFKRSSNAfKTWKRRWFSLQNGQLYYQK--RDKKDEPTVMVEDLRL-------------------------------- 48
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1063721946 109 kvSSYRESKSDHRK--FYIFTATKTLHLRTDSRSDRAAWLQALAST 152
Cdd:cd13250    49 --CTVKPTEDSDRRfcFEVISPTKSYMLQAESEEDRQAWIQAIQSA 92
PH_ORP10_ORP11 cd13291
Human Oxysterol binding protein (OSBP) related proteins 10 and 11 (ORP10 and ORP11) Pleckstrin ...
30-73 4.98e-06

Human Oxysterol binding protein (OSBP) related proteins 10 and 11 (ORP10 and ORP11) Pleckstrin homology (PH) domain; Human ORP10 is involvedt in intracellular transport or organelle positioning and is proposed to function as a regulator of cellular lipid metabolism. Human ORP11 localizes at the Golgi-late endosome interface and is thought to form a dimer with ORP9 functioning as an intracellular lipid sensor or transporter. Both ORP10 and ORP11 contain a N-terminal PH domain, a FFAT motif (two phenylalanines in an acidic tract), and a C-terminal OSBP-related domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. In general OSBPs and ORPs have been found to be involved in the transport and metabolism of cholesterol and related lipids in eukaryotes. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. They are members of the oxysterol binding protein (OSBP) family which includes OSBP, OSBP-related proteins (ORP), Goodpasture antigen binding protein (GPBP), and Four phosphate adaptor protein 1 (FAPP1). They have a wide range of purported functions including sterol transport, cell cycle control, pollen development and vessicle transport from Golgi recognize both PI lipids and ARF proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270106  Cd Length: 107  Bit Score: 45.75  E-value: 4.98e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063721946  30 GILYKWTNYGKGWRSRWFLL--RDGILSY-----SKIRRPENV-----NLLSPSDD 73
Cdd:cd13291     3 GQLLKYTNVVKGWQNRWFVLdpDTGILEYflseeSKNQKPRGSlslagAVISPSDE 58
PH_ORP9 cd13290
Human Oxysterol binding protein related protein 9 Pleckstrin homology (PH) domain; Human ORP9 ...
28-153 2.47e-05

Human Oxysterol binding protein related protein 9 Pleckstrin homology (PH) domain; Human ORP9 is proposed to function in regulation of Akt phosphorylation. ORP9 has 2 forms, a long (ORP9L) and a short (ORP9S). ORP9L contains an N-terminal PH domain, a FFAT motif (two phenylalanines in an acidic tract), and a C-terminal OSBP-related domain. ORP1S is truncated and contains a FFAT motif and an OSBP-related domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. In general OSBPs and ORPs have been found to be involved in the transport and metabolism of cholesterol and related lipids in eukaryotes. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. They are members of the oxysterol binding protein (OSBP) family which includes OSBP, OSBP-related proteins (ORP), Goodpasture antigen binding protein (GPBP), and Four phosphate adaptor protein 1 (FAPP1). They have a wide range of purported functions including sterol transport, cell cycle control, pollen development and vessicle transport from Golgi recognize both PI lipids and ARF proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 241444  Cd Length: 102  Bit Score: 43.59  E-value: 2.47e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  28 VAGILYKWTNYGKGWRSRWFLLRD--GILSYSKirrpenvnllspsddlrligdiSTDRLLRmkscsgRSRRkhhkniGI 105
Cdd:cd13290     1 MEGPLSKWTNVMKGWQYRWFVLDDnaGLLSYYT----------------------SKEKMMR------GSRR------GC 46
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1063721946 106 VHLKVSSYRESKSDHRKFYIFTATKTLHLRTDSRSDRAAWLQALASTR 153
Cdd:cd13290    47 VRLKGAVVGIDDEDDSTFTITVDQKTFHFQARDAEERERWIRALEDTI 94
PH_TAAP2-like cd13255
Tandem PH-domain-containing protein 2 Pleckstrin homology (PH) domain; The binding of TAPP2 ...
29-153 5.05e-05

Tandem PH-domain-containing protein 2 Pleckstrin homology (PH) domain; The binding of TAPP2 (also called PLEKHA2) adaptors to PtdIns(3,4)P(2), but not PI(3,4, 5)P3, function as negative regulators of insulin and PI3K signalling pathways (i.e. TAPP/utrophin/syntrophin complex). TAPP2 contains two sequential PH domains in which the C-terminal PH domain specifically binds PtdIns(3,4)P2 with high affinity. The N-terminal PH domain does not interact with any phosphoinositide tested. They also contain a C-terminal PDZ-binding motif that interacts with several PDZ-binding proteins, including PTPN13 (known previously as PTPL1 or FAP-1) as well as the scaffolding proteins MUPP1 (multiple PDZ-domain-containing protein 1), syntrophin and utrophin. The members here are most sequence similar to TAPP2 proteins, but may not be actual TAPP2 proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270075  Cd Length: 110  Bit Score: 42.79  E-value: 5.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  29 AGILYKWTNYGKGWRSRWFLLRDGILSYSKirrpenvnllspSDD----LRLI--GDISTdrllrmksCSGRSRRKHHKN 102
Cdd:cd13255     9 AGYLEKKGERRKTWKKRWFVLRPTKLAYYK------------NDKeyrlLRLIdlTDIHT--------CTEVQLKKHDNT 68
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063721946 103 IGIVhlkvssyresksdhrkfyifTATKTLHLRTDSRSDRAAWLQALASTR 153
Cdd:cd13255    69 FGIV--------------------TPARTFYVQADSKAEMESWISAINLAR 99
PH pfam00169
PH domain; PH stands for pleckstrin homology.
30-149 1.99e-04

PH domain; PH stands for pleckstrin homology.


Pssm-ID: 459697 [Multi-domain]  Cd Length: 105  Bit Score: 41.01  E-value: 1.99e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  30 GILYKWTNY-GKGWRSRWFLLRDGILSYSKIRRPENVNLLSPSDDLRLIGDISTDRLLRMKscsgrsrRKHHKNIgivhl 108
Cdd:pfam00169   5 GWLLKKGGGkKKSWKKRYFVLFDGSLLYYKDDKSGKSKEPKGSISLSGCEVVEVVASDSPK-------RKFCFEL----- 72
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1063721946 109 kvssyresksdhrKFYIFTATKTLHLRTDSRSDRAAWLQAL 149
Cdd:pfam00169  73 -------------RTGERTGKRTYLLQAESEEERKDWIKAI 100
PH2_MyoX cd13296
Myosin X Pleckstrin homology (PH) domain, repeat 2; MyoX, a MyTH-FERM myosin, is a molecular ...
40-151 2.24e-04

Myosin X Pleckstrin homology (PH) domain, repeat 2; MyoX, a MyTH-FERM myosin, is a molecular motor that has crucial functions in the transport and/or tethering of integrins in the actin-based extensions known as filopodia, microtubule binding, and in netrin-mediated axon guidance. It functions as a dimer. MyoX walks on bundles of actin, rather than single filaments, unlike the other unconventional myosins. MyoX is present in organisms ranging from humans to choanoflagellates, but not in Drosophila and Caenorhabditis elegans.MyoX consists of a N-terminal motor/head region, a neck made of 3 IQ motifs, and a tail consisting of a coiled-coil domain, a PEST region, 3 PH domains, a myosin tail homology 4 (MyTH4), and a FERM domain at its very C-terminus. The first PH domain in the MyoX tail is a split-PH domain, interupted by the second PH domain such that PH 1a and PH 1b flanks PH 2. The third PH domain (PH 3) follows the PH 1b domain. This cd contains the second PH repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270108  Cd Length: 103  Bit Score: 40.91  E-value: 2.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  40 KGWRSRWFLLRDGILSYSKirrpenvnllSPSDDLRLIGDIstdrllrmkscsgrsrrkhhkNIGIVHLKVssyrESKSD 119
Cdd:cd13296    18 RNWKSRWFVLRDTVLKYYE----------NDQEGEKLLGTI---------------------DIRSAKEIV----DNDPK 62
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1063721946 120 HRKFYIFTATKTLHLRTDSRSDRAAWLQALAS 151
Cdd:cd13296    63 ENRLSITTEERTYHLVAESPEDASQWVNVLTR 94
PH1_PLEKHH1_PLEKHH2 cd13282
Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 ...
29-149 3.54e-03

Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; PLEKHH1 and PLEKHH2 (also called PLEKHH1L) are thought to function in phospholipid binding and signal transduction. There are 3 Human PLEKHH genes: PLEKHH1, PLEKHH2, and PLEKHH3. There are many isoforms, the longest of which contain a FERM domain, a MyTH4 domain, two PH domains, a peroximal domain, a vacuolar domain, and a coiled coil stretch. The FERM domain has a cloverleaf tripart structure (FERM_N, FERM_M, FERM_C/N, alpha-, and C-lobe/A-lobe, B-lobe, C-lobe/F1, F2, F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 241436  Cd Length: 96  Bit Score: 37.28  E-value: 3.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721946  29 AGILYKWTNYGKGWRSRWFLLRDGILSYSKirrpenvnllSPSDDLRligdistdrllrmkscsgrsrrkhhKNIGIVHL 108
Cdd:cd13282     2 AGYLTKLGGKVKTWKRRWFVLKNGELFYYK----------SPNDVIR-------------------------KPQGQIAL 46
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1063721946 109 KVSSYRESKSDHRKFYIFTATKTLHLRTDSRSDRAAWLQAL 149
Cdd:cd13282    47 DGSCEIARAEGAQTFEIVTEKRTYYLTADSENDLDEWIRVI 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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