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Conserved domains on  [gi|1063713325|ref|NP_001326592|]
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Cyclopropane-fatty-acyl-phospholipid synthase [Arabidopsis thaliana]

Protein Classification

SAM-dependent methyltransferase( domain architecture ID 11454891)

SAM-dependent methyltransferase catalyzes the methylation of one or more specific substrates using S-adenosyl-L-methionine (SAM or AdoMet) as the methyl donor

CATH:  2.20.25.110
EC:  2.1.-.-
SCOP:  3000118

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
CMAS super family cl47167
Mycolic acid cyclopropane synthetase; This family consist of ...
117-374 8.22e-69

Mycolic acid cyclopropane synthetase; This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.


The actual alignment was detected with superfamily member pfam02353:

Pssm-ID: 481507 [Multi-domain]  Cd Length: 272  Bit Score: 220.28  E-value: 8.22e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 117 SNEFFGLFMDDTMMYSSAVFK---VTIKNFQNEKNTSFNRKGEDKEEPYeVLEIGCGWGTLAIEVVKRTGCKYTGFTLSI 193
Cdd:pfam02353  16 SNDFFALFLDPTMTYSCAYFErpdMTLEEAQQAKLDLILDKLGLKPGMT-LLDIGCGWGGLMRRAAERYDVNVVGLTLSK 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 194 EQLKYVEEKVKEAGLQERITFKLCDYRQLcdTQKYDRIISCEMIEHVGHKFMETFFSHCEAALAEDGIFVLQ-FTAIPEE 272
Cdd:pfam02353  95 NQYKLARKRVAAEGLARKVEVLLQDYRDF--DEPFDRIVSVGMFEHVGHENYDTFFKKLYNLLPPGGLMLLHtITGLHPD 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 273 LYDESRLTSGFITEYIFPGGCLPSLARVTSAMaSSSRLCIENVENIGIHYYPTLRYWRKNLLERQKQIIDLgFDEKFLRT 352
Cdd:pfam02353 173 ETSERGLPLKFIDKYIFPGGELPSISMIVESS-SEAGFTVEDVESLRPHYAKTLDLWAENLQANKDEAIAL-QSEEFYRM 250
                         250       260
                  ....*....|....*....|..
gi 1063713325 353 WEYYFDYCAAGFKTLTLRNYQI 374
Cdd:pfam02353 251 WMLYLTGCAVAFRIGYIDVHQF 272
 
Name Accession Description Interval E-value
CMAS pfam02353
Mycolic acid cyclopropane synthetase; This family consist of ...
117-374 8.22e-69

Mycolic acid cyclopropane synthetase; This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.


Pssm-ID: 396777 [Multi-domain]  Cd Length: 272  Bit Score: 220.28  E-value: 8.22e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 117 SNEFFGLFMDDTMMYSSAVFK---VTIKNFQNEKNTSFNRKGEDKEEPYeVLEIGCGWGTLAIEVVKRTGCKYTGFTLSI 193
Cdd:pfam02353  16 SNDFFALFLDPTMTYSCAYFErpdMTLEEAQQAKLDLILDKLGLKPGMT-LLDIGCGWGGLMRRAAERYDVNVVGLTLSK 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 194 EQLKYVEEKVKEAGLQERITFKLCDYRQLcdTQKYDRIISCEMIEHVGHKFMETFFSHCEAALAEDGIFVLQ-FTAIPEE 272
Cdd:pfam02353  95 NQYKLARKRVAAEGLARKVEVLLQDYRDF--DEPFDRIVSVGMFEHVGHENYDTFFKKLYNLLPPGGLMLLHtITGLHPD 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 273 LYDESRLTSGFITEYIFPGGCLPSLARVTSAMaSSSRLCIENVENIGIHYYPTLRYWRKNLLERQKQIIDLgFDEKFLRT 352
Cdd:pfam02353 173 ETSERGLPLKFIDKYIFPGGELPSISMIVESS-SEAGFTVEDVESLRPHYAKTLDLWAENLQANKDEAIAL-QSEEFYRM 250
                         250       260
                  ....*....|....*....|..
gi 1063713325 353 WEYYFDYCAAGFKTLTLRNYQI 374
Cdd:pfam02353 251 WMLYLTGCAVAFRIGYIDVHQF 272
PRK11705 PRK11705
cyclopropane fatty acyl phospholipid synthase;
34-380 1.44e-53

cyclopropane fatty acyl phospholipid synthase;


Pssm-ID: 183282  Cd Length: 383  Bit Score: 183.90  E-value: 1.44e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325  34 LKIHSPQFYWKVMTLADLGLADAYINGDFS------FVDK----------DSGLLNLIMILIAnrdlnsRKSNLAKKRGW 97
Cdd:PRK11705   39 IQVHNPRFFKRVLQEGSLGLGESYMDGWWDcdrldeFFSRvlragldeklPHHLKDTLRILRA------RLFNLQSKKRA 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325  98 WTpvfltasLASATYYLkhSNEFFGLFMDDTMMYSSAVFK--VTIKNFQNEKNTSFNRK-----GEdkeepyEVLEIGCG 170
Cdd:PRK11705  113 WI-------VGKEHYDL--GNDLFEAMLDPRMQYSCGYWKdaDTLEEAQEAKLDLICRKlqlkpGM------RVLDIGCG 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 171 WGTLAIEVVKRTGCKYTGFTLSIEQLKYVEEKVkeAGLQerITFKLCDYRQLcdTQKYDRIISCEMIEHVGHKFMETFFS 250
Cdd:PRK11705  178 WGGLARYAAEHYGVSVVGVTISAEQQKLAQERC--AGLP--VEIRLQDYRDL--NGQFDRIVSVGMFEHVGPKNYRTYFE 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 251 HCEAALAEDGIFVLQftAIPEELYDESrlTSGFITEYIFPGGCLPSLARVTSamASSSRLCIENVENIGIHYYPTLRYWR 330
Cdd:PRK11705  252 VVRRCLKPDGLFLLH--TIGSNKTDTN--VDPWINKYIFPNGCLPSVRQIAQ--ASEGLFVMEDWHNFGADYDRTLMAWH 325
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063713325 331 KNLLERQKQIIDlGFDEKFLRTWEYYFDYCAAGFKTLTLRNYQIVFSRPG 380
Cdd:PRK11705  326 ENFEAAWPELAD-NYSERFYRMWRYYLLSCAGAFRARDIQLWQVVFSPRG 374
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
117-266 7.15e-50

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 167.03  E-value: 7.15e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 117 SNEFFGLFMDDTMMYSSAVFK---VTIKNFQNEKNTSFNRKGEDKEEPyEVLEIGCGWGTLAIEVVKRTGCKYTGFTLSI 193
Cdd:COG2230     6 GNDFYRLFLDPTMTYSCAYFEdpdDTLEEAQEAKLDLILRKLGLKPGM-RVLDIGCGWGGLALYLARRYGVRVTGVTLSP 84
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063713325 194 EQLKYVEEKVKEAGLQERITFKLCDYRQLCDTQKYDRIISCEMIEHVGHKFMETFFSHCEAALAEDGIFVLQF 266
Cdd:COG2230    85 EQLEYARERAAEAGLADRVEVRLADYRDLPADGQFDAIVSIGMFEHVGPENYPAYFAKVARLLKPGGRLLLHT 157
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
164-266 7.69e-13

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 64.76  E-value: 7.69e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 164 VLEIGCGWGTLAIEVVKRTGCKYTGFTLSIEQLKYVeEKVKEAGLQERITFKLCDYRQL--CDTQKYDRIISCEMIEHVG 241
Cdd:cd02440     2 VLDLGCGTGALALALASGPGARVTGVDISPVALELA-RKAAAALLADNVEVLKGDAEELppEADESFDVIISDPPLHHLV 80
                          90       100
                  ....*....|....*....|....*
gi 1063713325 242 HKFMEtFFSHCEAALAEDGIFVLQF 266
Cdd:cd02440    81 EDLAR-FLEEARRLLKPGGVLVLTL 104
PKS_MT smart00828
Methyltransferase in polyketide synthase (PKS) enzymes;
164-285 7.15e-09

Methyltransferase in polyketide synthase (PKS) enzymes;


Pssm-ID: 214839 [Multi-domain]  Cd Length: 224  Bit Score: 55.89  E-value: 7.15e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325  164 VLEIGCGWGTLAIEVVKRTG-CKYTGFTLSIEQLKYVEEKVKEAGLQERITFKLCDYRQLCDTQKYDRIISCEMIEHVGH 242
Cdd:smart00828   3 VLDFGCGYGSDLIDLAERHPhLQLHGYTISPEQAEVGRERIRALGLQGRIRIFYRDSAKDPFPDTYDLVFGFEVIHHIKD 82
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1063713325  243 KfmETFFSHCEAALAEDGIFVL-QFTAIPEELYDESRLTSGFIT 285
Cdd:smart00828  83 K--MDLFSNISRHLKDGGHLVLaDFIANLLSAIEHEETTSYLVT 124
 
Name Accession Description Interval E-value
CMAS pfam02353
Mycolic acid cyclopropane synthetase; This family consist of ...
117-374 8.22e-69

Mycolic acid cyclopropane synthetase; This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.


Pssm-ID: 396777 [Multi-domain]  Cd Length: 272  Bit Score: 220.28  E-value: 8.22e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 117 SNEFFGLFMDDTMMYSSAVFK---VTIKNFQNEKNTSFNRKGEDKEEPYeVLEIGCGWGTLAIEVVKRTGCKYTGFTLSI 193
Cdd:pfam02353  16 SNDFFALFLDPTMTYSCAYFErpdMTLEEAQQAKLDLILDKLGLKPGMT-LLDIGCGWGGLMRRAAERYDVNVVGLTLSK 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 194 EQLKYVEEKVKEAGLQERITFKLCDYRQLcdTQKYDRIISCEMIEHVGHKFMETFFSHCEAALAEDGIFVLQ-FTAIPEE 272
Cdd:pfam02353  95 NQYKLARKRVAAEGLARKVEVLLQDYRDF--DEPFDRIVSVGMFEHVGHENYDTFFKKLYNLLPPGGLMLLHtITGLHPD 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 273 LYDESRLTSGFITEYIFPGGCLPSLARVTSAMaSSSRLCIENVENIGIHYYPTLRYWRKNLLERQKQIIDLgFDEKFLRT 352
Cdd:pfam02353 173 ETSERGLPLKFIDKYIFPGGELPSISMIVESS-SEAGFTVEDVESLRPHYAKTLDLWAENLQANKDEAIAL-QSEEFYRM 250
                         250       260
                  ....*....|....*....|..
gi 1063713325 353 WEYYFDYCAAGFKTLTLRNYQI 374
Cdd:pfam02353 251 WMLYLTGCAVAFRIGYIDVHQF 272
PRK11705 PRK11705
cyclopropane fatty acyl phospholipid synthase;
34-380 1.44e-53

cyclopropane fatty acyl phospholipid synthase;


Pssm-ID: 183282  Cd Length: 383  Bit Score: 183.90  E-value: 1.44e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325  34 LKIHSPQFYWKVMTLADLGLADAYINGDFS------FVDK----------DSGLLNLIMILIAnrdlnsRKSNLAKKRGW 97
Cdd:PRK11705   39 IQVHNPRFFKRVLQEGSLGLGESYMDGWWDcdrldeFFSRvlragldeklPHHLKDTLRILRA------RLFNLQSKKRA 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325  98 WTpvfltasLASATYYLkhSNEFFGLFMDDTMMYSSAVFK--VTIKNFQNEKNTSFNRK-----GEdkeepyEVLEIGCG 170
Cdd:PRK11705  113 WI-------VGKEHYDL--GNDLFEAMLDPRMQYSCGYWKdaDTLEEAQEAKLDLICRKlqlkpGM------RVLDIGCG 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 171 WGTLAIEVVKRTGCKYTGFTLSIEQLKYVEEKVkeAGLQerITFKLCDYRQLcdTQKYDRIISCEMIEHVGHKFMETFFS 250
Cdd:PRK11705  178 WGGLARYAAEHYGVSVVGVTISAEQQKLAQERC--AGLP--VEIRLQDYRDL--NGQFDRIVSVGMFEHVGPKNYRTYFE 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 251 HCEAALAEDGIFVLQftAIPEELYDESrlTSGFITEYIFPGGCLPSLARVTSamASSSRLCIENVENIGIHYYPTLRYWR 330
Cdd:PRK11705  252 VVRRCLKPDGLFLLH--TIGSNKTDTN--VDPWINKYIFPNGCLPSVRQIAQ--ASEGLFVMEDWHNFGADYDRTLMAWH 325
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063713325 331 KNLLERQKQIIDlGFDEKFLRTWEYYFDYCAAGFKTLTLRNYQIVFSRPG 380
Cdd:PRK11705  326 ENFEAAWPELAD-NYSERFYRMWRYYLLSCAGAFRARDIQLWQVVFSPRG 374
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
117-266 7.15e-50

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 167.03  E-value: 7.15e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 117 SNEFFGLFMDDTMMYSSAVFK---VTIKNFQNEKNTSFNRKGEDKEEPyEVLEIGCGWGTLAIEVVKRTGCKYTGFTLSI 193
Cdd:COG2230     6 GNDFYRLFLDPTMTYSCAYFEdpdDTLEEAQEAKLDLILRKLGLKPGM-RVLDIGCGWGGLALYLARRYGVRVTGVTLSP 84
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063713325 194 EQLKYVEEKVKEAGLQERITFKLCDYRQLCDTQKYDRIISCEMIEHVGHKFMETFFSHCEAALAEDGIFVLQF 266
Cdd:COG2230    85 EQLEYARERAAEAGLADRVEVRLADYRDLPADGQFDAIVSIGMFEHVGPENYPAYFAKVARLLKPGGRLLLHT 157
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
164-260 9.50e-19

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 81.07  E-value: 9.50e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 164 VLEIGCGWGTLAIEVVKRTGCKYTGFTLSIEQLKYVEEKVKEAGLqeRITFKLCDYRQL-CDTQKYDRIISCEMIEHVGH 242
Cdd:pfam13649   1 VLDLGCGTGRLTLALARRGGARVTGVDLSPEMLERARERAAEAGL--NVEFVQGDAEDLpFPDGSFDLVVSSGVLHHLPD 78
                          90
                  ....*....|....*...
gi 1063713325 243 KFMETFFSHCEAALAEDG 260
Cdd:pfam13649  79 PDLEAALREIARVLKPGG 96
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
156-279 1.89e-16

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 77.65  E-value: 1.89e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 156 EDKEEPYEVLEIGCGWGTLAIEVVKRTGCKYTGFTLSIEQLKYVEEKVKEAGLqERITFKLCDYRQLCD--TQKYDRIIS 233
Cdd:COG0500    22 ERLPKGGRVLDLGCGTGRNLLALAARFGGRVIGIDLSPEAIALARARAAKAGL-GNVEFLVADLAELDPlpAESFDLVVA 100
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1063713325 234 CEMIEHVGHKFMETFFSHCEAALAEDGIFVLQFTAIPEELYDESRL 279
Cdd:COG0500   101 FGVLHHLPPEEREALLRELARALKPGGVLLLSASDAAAALSLARLL 146
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
164-266 1.19e-14

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 70.43  E-value: 1.19e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 164 VLEIGCGWGTLAIEVVKRtGCKYTGFTLSIEQLKYVEEKVKEAglqeRITFKLCDYRQL-CDTQKYDRIISCEMIEHVGH 242
Cdd:COG2227    28 VLDVGCGTGRLALALARR-GADVTGVDISPEALEIARERAAEL----NVDFVQGDLEDLpLEDGSFDLVICSEVLEHLPD 102
                          90       100
                  ....*....|....*....|....
gi 1063713325 243 kfMETFFSHCEAALAEDGIFVLQF 266
Cdd:COG2227   103 --PAALLRELARLLKPGGLLLLST 124
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
164-283 9.47e-14

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 68.10  E-value: 9.47e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 164 VLEIGCGWGTLAIEVVKRtGCKYTGFTLSIEQLKYVEEKVKEAGLqeRITFKLCDYRQL-CDTQKYDRIISCEMIEHVGH 242
Cdd:COG2226    26 VLDLGCGTGRLALALAER-GARVTGVDISPEMLELARERAAEAGL--NVEFVVGDAEDLpFPDGSFDLVISSFVLHHLPD 102
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1063713325 243 KfmETFFSHCEAALAEDGIFVLQFTAIPEELYDESRLTS-GF 283
Cdd:COG2226   103 P--ERALAEIARVLKPGGRLVVVDFSPPDLAELEELLAEaGF 142
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
164-266 7.69e-13

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 64.76  E-value: 7.69e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 164 VLEIGCGWGTLAIEVVKRTGCKYTGFTLSIEQLKYVeEKVKEAGLQERITFKLCDYRQL--CDTQKYDRIISCEMIEHVG 241
Cdd:cd02440     2 VLDLGCGTGALALALASGPGARVTGVDISPVALELA-RKAAAALLADNVEVLKGDAEELppEADESFDVIISDPPLHHLV 80
                          90       100
                  ....*....|....*....|....*
gi 1063713325 242 HKFMEtFFSHCEAALAEDGIFVLQF 266
Cdd:cd02440    81 EDLAR-FLEEARRLLKPGGVLVLTL 104
PKS_MT smart00828
Methyltransferase in polyketide synthase (PKS) enzymes;
164-285 7.15e-09

Methyltransferase in polyketide synthase (PKS) enzymes;


Pssm-ID: 214839 [Multi-domain]  Cd Length: 224  Bit Score: 55.89  E-value: 7.15e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325  164 VLEIGCGWGTLAIEVVKRTG-CKYTGFTLSIEQLKYVEEKVKEAGLQERITFKLCDYRQLCDTQKYDRIISCEMIEHVGH 242
Cdd:smart00828   3 VLDFGCGYGSDLIDLAERHPhLQLHGYTISPEQAEVGRERIRALGLQGRIRIFYRDSAKDPFPDTYDLVFGFEVIHHIKD 82
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1063713325  243 KfmETFFSHCEAALAEDGIFVL-QFTAIPEELYDESRLTSGFIT 285
Cdd:smart00828  83 K--MDLFSNISRHLKDGGHLVLaDFIANLLSAIEHEETTSYLVT 124
COG4976 COG4976
Predicted methyltransferase, contains TPR repeat [General function prediction only];
164-264 2.16e-08

Predicted methyltransferase, contains TPR repeat [General function prediction only];


Pssm-ID: 444001 [Multi-domain]  Cd Length: 181  Bit Score: 53.85  E-value: 2.16e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 164 VLEIGCGWGTLAIEVVKRtGCKYTGFTLSIEQLkyveEKVKEAGLQerITFKLCDYRQLCDT-QKYDRIISCEMIEHVGH 242
Cdd:COG4976    50 VLDLGCGTGLLGEALRPR-GYRLTGVDLSEEML----AKAREKGVY--DRLLVADLADLAEPdGRFDLIVAADVLTYLGD 122
                          90       100
                  ....*....|....*....|..
gi 1063713325 243 kfMETFFSHCEAALAEDGIFVL 264
Cdd:COG4976   123 --LAAVFAGVARALKPGGLFIF 142
Tam COG4106
Trans-aconitate methyltransferase [Energy production and conversion];
164-266 2.55e-08

Trans-aconitate methyltransferase [Energy production and conversion];


Pssm-ID: 443282 [Multi-domain]  Cd Length: 100  Bit Score: 51.36  E-value: 2.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 164 VLEIGCGWGTLAIEVVKR-TGCKYTGFTLSIEQLKYVEEKVkeaglqERITFKLCDYRQLCDTQKYDRIISCEMIEHVGH 242
Cdd:COG4106     5 VLDLGCGTGRLTALLAERfPGARVTGVDLSPEMLARARARL------PNVRFVVADLRDLDPPEPFDLVVSNAALHWLPD 78
                          90       100
                  ....*....|....*....|....
gi 1063713325 243 kfMETFFSHCEAALAEDGIFVLQF 266
Cdd:COG4106    79 --HAALLARLAAALAPGGVLAVQV 100
Methyltransf_12 pfam08242
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
165-262 3.08e-08

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 400515 [Multi-domain]  Cd Length: 98  Bit Score: 51.21  E-value: 3.08e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 165 LEIGCGWGTLAIEVVKR-TGCKYTGFTLSIEQLKYVEEKVKEAGLQ--ERITFKLCDyRQLCDTQKYDRIISCEMIEHVG 241
Cdd:pfam08242   1 LEIGCGTGTLLRALLEAlPGLEYTGLDISPAALEAARERLAALGLLnaVRVELFQLD-LGELDPGSFDVVVASNVLHHLA 79
                          90       100
                  ....*....|....*....|.
gi 1063713325 242 HkfMETFFSHCEAALAEDGIF 262
Cdd:pfam08242  80 D--PRAVLRNIRRLLKPGGVL 98
Methyltransf_11 pfam08241
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
165-264 5.02e-07

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 462406 [Multi-domain]  Cd Length: 94  Bit Score: 47.66  E-value: 5.02e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 165 LEIGCGWGtLAIEVVKRTGCKYTGFTLSIEQLKYVEEKVKEAGLqeriTFKLCDYRQLC-DTQKYDRIISCEMIEHVghK 243
Cdd:pfam08241   1 LDVGCGTG-LLTELLARLGARVTGVDISPEMLELAREKAPREGL----TFVVGDAEDLPfPDNSFDLVLSSEVLHHV--E 73
                          90       100
                  ....*....|....*....|.
gi 1063713325 244 FMETFFSHCEAALAEDGIFVL 264
Cdd:pfam08241  74 DPERALREIARVLKPGGILII 94
Methyltransf_23 pfam13489
Methyltransferase domain; This family appears to be a methyltransferase domain.
152-265 1.98e-06

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 404385 [Multi-domain]  Cd Length: 162  Bit Score: 47.81  E-value: 1.98e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 152 NRKGEDKEEPYEVLEIGCGWGTLAIEvVKRTGCKYTGFTLSIEQLKYVEEKVKEAGLQERItfklcdyrQLCDTQKYDRI 231
Cdd:pfam13489  14 LRLLPKLPSPGRVLDFGCGTGIFLRL-LRAQGFSVTGVDPSPIAIERALLNVRFDQFDEQE--------AAVPAGKFDVI 84
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1063713325 232 ISCEMIEHVG--HKFMETFFSHceaaLAEDGIFVLQ 265
Cdd:pfam13489  85 VAREVLEHVPdpPALLRQIAAL----LKPGGLLLLS 116
PLN02244 PLN02244
tocopherol O-methyltransferase
155-245 3.80e-06

tocopherol O-methyltransferase


Pssm-ID: 215135 [Multi-domain]  Cd Length: 340  Bit Score: 48.59  E-value: 3.80e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 155 GEDKEEPYEVLEIGCGWGTLAIEVVKRTGCKYTGFTLSIEQLKYVEEKVKEAGLQERITFKLCD-YRQLCDTQKYDRIIS 233
Cdd:PLN02244  113 DDDEKRPKRIVDVGCGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADaLNQPFEDGQFDLVWS 192
                          90
                  ....*....|....
gi 1063713325 234 CEMIEHV--GHKFM 245
Cdd:PLN02244  193 MESGEHMpdKRKFV 206
Methyltransf_31 pfam13847
Methyltransferase domain; This family appears to have methyltransferase activity.
158-282 3.02e-04

Methyltransferase domain; This family appears to have methyltransferase activity.


Pssm-ID: 463998 [Multi-domain]  Cd Length: 150  Bit Score: 40.86  E-value: 3.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 158 KEEPYEVLEIGCGWGTLAIEVVKRTG--CKYTGFTLSIEQLKYVEEKVKEAGLqERITFKLCDYRQLCDT---QKYDRII 232
Cdd:pfam13847   1 IDKGMRVLDLGCGTGHLSFELAEELGpnAEVVGIDISEEAIEKARENAQKLGF-DNVEFEQGDIEELPELledDKFDVVI 79
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063713325 233 SCEMIEHVGH--KFMETFFShceaALAEDGIFVLQ----FTAIPEELYDESRLTSG 282
Cdd:pfam13847  80 SNCVLNHIPDpdKVLQEILR----VLKPGGRLIISdpdsLAELPAHVKEDSTYYAG 131
Spermine_synth pfam01564
Spermine/spermidine synthase domain; Spermine and spermidine are polyamines. This family ...
155-275 9.07e-04

Spermine/spermidine synthase domain; Spermine and spermidine are polyamines. This family includes spermidine synthase that catalyzes the fifth (last) step in the biosynthesis of spermidine from arginine, and spermine synthase.


Pssm-ID: 396237 [Multi-domain]  Cd Length: 183  Bit Score: 40.00  E-value: 9.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 155 GEDKEEPYEVLEIGCGWGTLAIEVVKRTgckytgftlSIEQLKYVE--EKV-----------KEAGLQERITFKLCD-YR 220
Cdd:pfam01564  13 LCSHPNPKKVLIIGGGDGGVLREVVKHP---------SVEKITLVDidEKVidfskkflpslAIGFQDPRVKVVIGDgFK 83
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1063713325 221 QLCDTQ-KYDRIIScEMIEHVG---HKFMETFFSHCEAALAEDGIFVLQFTAIPEELYD 275
Cdd:pfam01564  84 FLKDYLnTFDVIIV-DSTDPVGpaeNLFSKPFFDLLKKALKEDGVFITQAESPWLHLEL 141
TrmN6 COG4123
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) ...
164-264 2.36e-03

tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) A37 N6-methylase TrmN6 is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 443299 [Multi-domain]  Cd Length: 238  Bit Score: 39.36  E-value: 2.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063713325 164 VLEIGCGWGTLAIEVVKRT-GCKYTGftlsIE-QLKYVE---EKVKEAGLQERITFKLCDYRQLCD---TQKYDRIIS-- 233
Cdd:COG4123    41 VLDLGTGTGVIALMLAQRSpGARITG----VEiQPEAAElarRNVALNGLEDRITVIHGDLKEFAAelpPGSFDLVVSnp 116
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1063713325 234 ----------CEMIE-----HVGHKFMETFFSHCEAALAEDGIFVL 264
Cdd:COG4123   117 pyfkagsgrkSPDEAraiarHEDALTLEDLIRAAARLLKPGGRFAL 162
Gcd14 COG2519
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 ...
164-232 7.15e-03

tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 N-methylase Trm61 is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 442009 [Multi-domain]  Cd Length: 249  Bit Score: 38.22  E-value: 7.15e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063713325 164 VLEIGCGWGTLAI---EVVKRTGcKYTGFTLSIEQLKYVEEKVKEAGLQERITFKLCDYRQLCDTQKYDRII 232
Cdd:COG2519    95 VLEAGTGSGALTLalaRAVGPEG-KVYSYERREDFAEIARKNLERFGLPDNVELKLGDIREGIDEGDVDAVF 165
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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