NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1063704932|ref|NP_001324880|]
View 

Chalcone-flavanone isomerase family protein [Arabidopsis thaliana]

Protein Classification

chalcone isomerase domain-containing protein; chalcone isomerase family protein( domain architecture ID 10011019)

chalcone isomerase domain-containing protein, similar to fungal altered inheritance of mitochondria proteins 18 and 46| chalcone isomerase family protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PLN03175 PLN03175
hypothetical protein; Provisional
 2-398 0e+00

hypothetical protein; Provisional


:

Pssm-ID: 178719  Cd Length: 415  Bit Score: 677.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932   2 SNMDPNSV--LPKRSFLQHEL------------------FSQLHIPGSLAF-EAFSCISKFTGALLCWFSHGNLQKEVSK 60
Cdd:PLN03175    1 SNLDHNSGylFPIDSPLSHDLglglfshvgtfvdnslhqSRQICIPGSLAFqEAFSCISKFAGALLFWFSRASNPKLSRR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932  61 HQWGLTCKSRDSLKHVFEHR----NVSVFPFHYVSKDISPG--FFGNISKSTIQHFVNEAERLHSCSLLSLAAAMIPSLN 134
Cdd:PLN03175   81 LSGGQGSSSRASQSHIAQVKscmqNLAGLPFGSQSKEEHAGqlLFAKISSFTIGRLWNEAERLHSCNVLSLAAALVPPLE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 135 VMSANGLALPLGSNDVKLRENiehrtcpenTEHRTCQVGCEEYSGLSFQKLDWTRQSVEPRTGIEFPMLLKENASRSNSE 214
Cdd:PLN03175  161 NISPKVLAMPLGNDDVQVSEP---------TDQRYCEVEHSGCSGLSFPDLNWTRDAVEPRTGIEFPMLLDENNSSLTSE 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 215 VLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINT 294
Cdd:PLN03175  232 VLVGTGSRTMKIIRIKSLKVYAFGFYVHPNSVCEKLGPKYASVPASELKKCPDFYEDLLREDIVMTVRLVVNYNGLKINT 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 295 VRDVFEKSLRARLVKANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITEIGGNLIGAVRSKDLCRAFFGMYI 374
Cdd:PLN03175  312 VRDAFEKSLRNRLQKMNPNTDYNCLKTFGSFFTEDIPIPAGTKIDFRRTSDGQLITEIGGNQIGAVRSKDLCRAFFDMYI 391

                         410       420
                  ....*....|....*....|....
gi 1063704932 375 GDVPVSEQTKEEIGRKVVGIIKRC 398
Cdd:PLN03175  392 GDVPVSEQTKEEIGQNVAGIIRRC 415
 
Name Accession Description Interval E-value
PLN03175 PLN03175
hypothetical protein; Provisional
 2-398 0e+00

hypothetical protein; Provisional


Pssm-ID: 178719  Cd Length: 415  Bit Score: 677.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932   2 SNMDPNSV--LPKRSFLQHEL------------------FSQLHIPGSLAF-EAFSCISKFTGALLCWFSHGNLQKEVSK 60
Cdd:PLN03175    1 SNLDHNSGylFPIDSPLSHDLglglfshvgtfvdnslhqSRQICIPGSLAFqEAFSCISKFAGALLFWFSRASNPKLSRR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932  61 HQWGLTCKSRDSLKHVFEHR----NVSVFPFHYVSKDISPG--FFGNISKSTIQHFVNEAERLHSCSLLSLAAAMIPSLN 134
Cdd:PLN03175   81 LSGGQGSSSRASQSHIAQVKscmqNLAGLPFGSQSKEEHAGqlLFAKISSFTIGRLWNEAERLHSCNVLSLAAALVPPLE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 135 VMSANGLALPLGSNDVKLRENiehrtcpenTEHRTCQVGCEEYSGLSFQKLDWTRQSVEPRTGIEFPMLLKENASRSNSE 214
Cdd:PLN03175  161 NISPKVLAMPLGNDDVQVSEP---------TDQRYCEVEHSGCSGLSFPDLNWTRDAVEPRTGIEFPMLLDENNSSLTSE 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 215 VLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINT 294
Cdd:PLN03175  232 VLVGTGSRTMKIIRIKSLKVYAFGFYVHPNSVCEKLGPKYASVPASELKKCPDFYEDLLREDIVMTVRLVVNYNGLKINT 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 295 VRDVFEKSLRARLVKANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITEIGGNLIGAVRSKDLCRAFFGMYI 374
Cdd:PLN03175  312 VRDAFEKSLRNRLQKMNPNTDYNCLKTFGSFFTEDIPIPAGTKIDFRRTSDGQLITEIGGNQIGAVRSKDLCRAFFDMYI 391

                         410       420
                  ....*....|....*....|....
gi 1063704932 375 GDVPVSEQTKEEIGRKVVGIIKRC 398
Cdd:PLN03175  392 GDVPVSEQTKEEIGQNVAGIIRRC 415
Chalcone_2 pfam16035
Chalcone isomerase like;
216-387 2.32e-25

Chalcone isomerase like;


Pssm-ID: 435089  Cd Length: 203  Bit Score: 101.89  E-value: 2.32e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 216 LVATGSRTMKIIRIKslkVYAFGFYVHPSSVC---QKLGRKYASVPA----------SKLDKCDD-------LYKDLLRE 275
Cdd:pfam16035   5 LLGLGVRTVSFLSIK---VYVVGIYIATSDIAklqKVLNSTYLSKNFidtdlvksekENLKKALLdpekseeLIENLLDS 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 276 DIVMSVRLVVNYNGlKINTVRDVFEKSLRARLVKANPKTD--F-NCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITEI 352
Cdd:pfam16035  82 GIRTAARIVPVRNT-DFGHLRDGFVRAILARPKAKYEYDDeeFgEGLKEFKSLFPRKGSVPKGDELLLERDANGSLSVSY 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1063704932 353 GGN------LIGAVRSKDLCRAFFGMYI-GDVPVSEQTKEEI 387
Cdd:pfam16035 161 DGKkkkeveKLGTVEDPRVSRLLFLQYLsGKKPLSEPARKSV 202
 
Name Accession Description Interval E-value
PLN03175 PLN03175
hypothetical protein; Provisional
 2-398 0e+00

hypothetical protein; Provisional


Pssm-ID: 178719  Cd Length: 415  Bit Score: 677.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932   2 SNMDPNSV--LPKRSFLQHEL------------------FSQLHIPGSLAF-EAFSCISKFTGALLCWFSHGNLQKEVSK 60
Cdd:PLN03175    1 SNLDHNSGylFPIDSPLSHDLglglfshvgtfvdnslhqSRQICIPGSLAFqEAFSCISKFAGALLFWFSRASNPKLSRR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932  61 HQWGLTCKSRDSLKHVFEHR----NVSVFPFHYVSKDISPG--FFGNISKSTIQHFVNEAERLHSCSLLSLAAAMIPSLN 134
Cdd:PLN03175   81 LSGGQGSSSRASQSHIAQVKscmqNLAGLPFGSQSKEEHAGqlLFAKISSFTIGRLWNEAERLHSCNVLSLAAALVPPLE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 135 VMSANGLALPLGSNDVKLRENiehrtcpenTEHRTCQVGCEEYSGLSFQKLDWTRQSVEPRTGIEFPMLLKENASRSNSE 214
Cdd:PLN03175  161 NISPKVLAMPLGNDDVQVSEP---------TDQRYCEVEHSGCSGLSFPDLNWTRDAVEPRTGIEFPMLLDENNSSLTSE 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 215 VLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINT 294
Cdd:PLN03175  232 VLVGTGSRTMKIIRIKSLKVYAFGFYVHPNSVCEKLGPKYASVPASELKKCPDFYEDLLREDIVMTVRLVVNYNGLKINT 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 295 VRDVFEKSLRARLVKANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITEIGGNLIGAVRSKDLCRAFFGMYI 374
Cdd:PLN03175  312 VRDAFEKSLRNRLQKMNPNTDYNCLKTFGSFFTEDIPIPAGTKIDFRRTSDGQLITEIGGNQIGAVRSKDLCRAFFDMYI 391

                         410       420
                  ....*....|....*....|....
gi 1063704932 375 GDVPVSEQTKEEIGRKVVGIIKRC 398
Cdd:PLN03175  392 GDVPVSEQTKEEIGQNVAGIIRRC 415
PLN03174 PLN03174
Chalcone-flavanone isomerase-related; Provisional
 191-396 2.20e-46

Chalcone-flavanone isomerase-related; Provisional


Pssm-ID: 215613  Cd Length: 278  Bit Score: 160.40  E-value: 2.20e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 191 SVEPRTGIEFPmllkenASRSNSEVLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYK 270
Cdd:PLN03174   78 VVESKTGVSFP------AEIGDSRRLLGVGLRKKSILGLKNIDVYAFGVYADDDDLKKLLGEKYGKLSASELKGNKEFID 151

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 271 DLLREDIVMSVRLVVNYNGLKINTVRDVFEKSLRARLVKANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLIT 350
Cdd:PLN03174  152 DLMEADIKMTVRLQIVYGKLSIRSVRSAFEESVGSRLQKFGGSDNKELLQSFTSLFKDEYKIPKGSVIDLSREPGHVLRT 231

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1063704932 351 EIGGNLIGAVRSKDLCRAFFGMYIGDVPVSEQTKEEIGRKVVGIIK 396
Cdd:PLN03174  232 TIDGKEVGSIQSKLLCRSILDLYIGEDPFDKNAKEDIEENLASLLQ 277
Chalcone_2 pfam16035
Chalcone isomerase like;
216-387 2.32e-25

Chalcone isomerase like;


Pssm-ID: 435089  Cd Length: 203  Bit Score: 101.89  E-value: 2.32e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 216 LVATGSRTMKIIRIKslkVYAFGFYVHPSSVC---QKLGRKYASVPA----------SKLDKCDD-------LYKDLLRE 275
Cdd:pfam16035   5 LLGLGVRTVSFLSIK---VYVVGIYIATSDIAklqKVLNSTYLSKNFidtdlvksekENLKKALLdpekseeLIENLLDS 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 276 DIVMSVRLVVNYNGlKINTVRDVFEKSLRARLVKANPKTD--F-NCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITEI 352
Cdd:pfam16035  82 GIRTAARIVPVRNT-DFGHLRDGFVRAILARPKAKYEYDDeeFgEGLKEFKSLFPRKGSVPKGDELLLERDANGSLSVSY 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1063704932 353 GGN------LIGAVRSKDLCRAFFGMYI-GDVPVSEQTKEEI 387
Cdd:pfam16035 161 DGKkkkeveKLGTVEDPRVSRLLFLQYLsGKKPLSEPARKSV 202
PLN02311 PLN02311
chalcone isomerase
 142-396 5.84e-11

chalcone isomerase


Pssm-ID: 215177  Cd Length: 271  Bit Score: 62.67  E-value: 5.84e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 142 ALPLGsNDVKLREN--IEHRTCPENTEH----RTCQVGCEEYSglsfqkldwtrqsVEPRTGIEFPMLLKENASrSNSEV 215
Cdd:PLN02311   27 VLQTG-NTVSDSPNslLKHRHCNEISRVivksAAFSVGSAEYA-------------EETATSVKFQRSLTLPGC-SSPLS 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 216 LVATGSRTmKIIRIKSLKVYAFGFYVHPSSVcqklgrkyASVPASKLDKCDDLYKDllrEDIVMSVRLVVNYNGLKINTV 295
Cdd:PLN02311   92 LLGTGYRE-KVFAIIGVKVYAAGLYVNPSIL--------SGLSAWKGRSADEIQRD---SSLFSSIFQAPAEKSLQIVLV 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 296 RDV--------FEKSLRARLVKANPkTDFNCLNDFGSFFrQDIPIPAGTIIDFRRTEDGQLITEIGG-----NLIGAVRS 362
Cdd:PLN02311  160 RDVdgktfwdaLDEAISPRIKAPSP-DDTSALSTFRSIF-QNRSLNKGTVIFLTWINPSKMLVCISSeglpsSVDATIES 237

                         250       260       270
                  ....*....|....*....|....*....|....
gi 1063704932 363 KDLCRAFFGMYIGDVPVSEQTKEEIGRKVVGIIK 396
Cdd:PLN02311  238 GNVTSALFDVFFGDSPVSPSLKASVANGLATTLK 271
Chalcone_3 pfam16036
Chalcone isomerase-like; Chalcone_3 is a family of largely bacterial members.
 197-387 3.18e-03

Chalcone isomerase-like; Chalcone_3 is a family of largely bacterial members.


Pssm-ID: 435090  Cd Length: 165  Bit Score: 37.94  E-value: 3.18e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 197 GIEFPmllkENASRSNSE-VLVATGSRTMKIIrikslKVYAFGFYV-HPSSVCQKLgrKYASVPASKLD-KCDDLYKDLL 273
Cdd:pfam16036   6 GVKLP----DTVTVGGKElVLNGAGLRSKFFF-----KVYVAGLYLpEKSTDAQAI--LAAPGKAIRLHiLSRDVDSDKL 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704932 274 REDIVmsvrlvvnyNGLKINTVRDVfeKSLRARLVKanpktdfnclndFGSFFRQDIPipAGTIIDFRRTEDGQLITEIG 353
Cdd:pfam16036  75 KDAFT---------EGFENNTGGEL--ASLKPRIDR------------FKAAFAAEVK--KGDVFTLDYLPGTGTVVYKN 129

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1063704932 354 GNLIGAVRSKDLCRAFFGMYIGDVPVSEQTKEEI 387
Cdd:pfam16036 130 GKPLGTIPGEDFAKALLGIWLGEKPADDSLKDGL 163
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH