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Conserved domains on  [gi|1063706111|ref|NP_001324503|]
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cyclin-dependent kinase B1;2 [Arabidopsis thaliana]

Protein Classification

protein kinase family protein( domain architecture ID 229378)

protein kinase family protein may catalyze the transfer of the gamma-phosphoryl group from ATP to substrates such as serine/threonine and/or tyrosine residues on proteins, or may be a pseudokinase

CATH:  1.10.510.10
PubMed:  16244704
SCOP:  4003661

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PKc_like super family cl21453
Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the ...
2-242 1.04e-167

Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases, and choline kinases. These proteins catalyze the transfer of the gamma-phosphoryl group from ATP to hydroxyl groups in specific substrates such as serine, threonine, or tyrosine residues of proteins.


The actual alignment was detected with superfamily member cd07837:

Pssm-ID: 473864 [Multi-domain]  Cd Length: 294  Bit Score: 464.69  E-value: 1.04e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE--------------------------------------- 42
Cdd:cd07837     1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMEEEgvpstalrevsllqmlsqsiyivrlldvehveengkpll 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 ---------------DSHRKGsNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRA 107
Cdd:cd07837    81 ylvfeyldtdlkkfiDSYGRG-PHNPLPAKTIQSFMYQLCKGVAHCHSHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 108 FTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVM 187
Cdd:cd07837   160 FTIPIKSYTHEIVTLWYRAPEVLLGSTHYSTPVDMWSVGCIFAEMSRKQPLFPGDSELQQLLHIFRLLGTPNEEVWPGVS 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 188 ALRDWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:cd07837   240 KLRDWHEYPQWKPQDLSRAVPDLEPEGVDLLTKMLAYDPAKRISAKAALQHPYFD 294
 
Name Accession Description Interval E-value
STKc_CdkB_plant cd07837
Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase; ...
2-242 1.04e-167

Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270830 [Multi-domain]  Cd Length: 294  Bit Score: 464.69  E-value: 1.04e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE--------------------------------------- 42
Cdd:cd07837     1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMEEEgvpstalrevsllqmlsqsiyivrlldvehveengkpll 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 ---------------DSHRKGsNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRA 107
Cdd:cd07837    81 ylvfeyldtdlkkfiDSYGRG-PHNPLPAKTIQSFMYQLCKGVAHCHSHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 108 FTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVM 187
Cdd:cd07837   160 FTIPIKSYTHEIVTLWYRAPEVLLGSTHYSTPVDMWSVGCIFAEMSRKQPLFPGDSELQQLLHIFRLLGTPNEEVWPGVS 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 188 ALRDWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:cd07837   240 KLRDWHEYPQWKPQDLSRAVPDLEPEGVDLLTKMLAYDPAKRISAKAALQHPYFD 294
PLN00009 PLN00009
cyclin-dependent kinase A; Provisional
1-244 2.51e-113

cyclin-dependent kinase A; Provisional


Pssm-ID: 177649 [Multi-domain]  Cd Length: 294  Bit Score: 326.77  E-value: 2.51e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED---------------SHRK------------------ 47
Cdd:PLN00009    1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGvpstaireisllkemQHGNivrlqdvvhsekrlylvf 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 -----------------GSNPRpleasLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTV 110
Cdd:PLN00009   81 eyldldlkkhmdsspdfAKNPR-----LIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 PLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALR 190
Cdd:PLN00009  156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 191 DWH-VYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:PLN00009  236 DYKsAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
4-241 1.70e-76

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 232.04  E-value: 1.70e-76
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111    4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE-------------------------------------------MD 40
Cdd:smart00220   1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKkikkdrerilreikilkklkhpnivrlydvfededklylvmeyCE 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   41 EEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYThEIV 120
Cdd:smart00220  81 GGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDED-GHVKLADFGLARQLDPGEKLTT-FVG 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  121 TLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSefqQLLHIFRLLGTPTEQQWPgvmalrdwhvypkwep 200
Cdd:smart00220 159 TPEYMAPEVLLG-KGYGKAVDIWSLGVILYELLTGKPPFPGDD---QLLELFKKIGKPKPPFPP---------------- 218
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|.
gi 1063706111  201 qdlsrAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:smart00220 219 -----PEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
Pkinase pfam00069
Protein kinase domain;
4-241 6.86e-45

Protein kinase domain;


Pssm-ID: 459660 [Multi-domain]  Cd Length: 217  Bit Score: 150.09  E-value: 6.86e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHRKGSNprplEASLVQRFMFQ---LFKGVAHCHSH---- 76
Cdd:pfam00069   1 YEVLRKLGSGSFGTVYKAKHRDTGKIVAIKKIKKEKIKKKKDKNILR----EIKILKKLNHPnivRLYDAFEDKDNlylv 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  77 ------GVLHRDLKPQNLLLDKD-----KGILKiadlGLSRAftvplKAYTHEIVTLWYRAPEVLlGSTHYSTAVDIWSV 145
Cdd:pfam00069  77 leyvegGSLFDLLSEKGAFSEREakfimKQILE----GLESG-----SSLTTFVGTPWYMAPEVL-GGNPYGPKVDVWSL 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 146 GCIFAEMIRRQALFPGDSEFQQLLHIFRllgtpteqqwpgvmalrdwhvypkwEPQDLSRAVPSLSPEGIDLLTQMLKYN 225
Cdd:pfam00069 147 GCILYELLTGKPPFPGINGNEIYELIID-------------------------QPYAFPELPSNLSEEAKDLLKKLLKKD 201
                         250
                  ....*....|....*.
gi 1063706111 226 PAERISAKAALDHPYF 241
Cdd:pfam00069 202 PSKRLTATQALQHPWF 217
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
3-237 5.26e-34

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 127.44  E-value: 5.26e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEEDSHR---------------------------------- 46
Cdd:COG0515     8 RYRILRLLGRGGMGVVYLARDLRLGRPVALKvlRPELAADPEARERfrrearalarlnhpnivrvydvgeedgrpylvme 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 -----------KGSNPRPLEASLvqRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAY 115
Cdd:COG0515    88 yvegesladllRRRGPLPPAEAL--RILAQLAEALAAAHAAGIVHRDIKPANILLTPD-GRVKLIDFGIARALGGATLTQ 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIV-TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRllgtpteqqwpgvmalrdwhv 194
Cdd:COG0515   165 TGTVVgTPGYMAPEQARGEP-VDPRSDVYSLGVTLYELLTGRPPFDGDSPAELLRAHLR--------------------- 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 195 ypkWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERI-SAKAALD 237
Cdd:COG0515   223 ---EPPPPPSELRPDLPPALDAIVLRALAKDPEERYqSAAELAA 263
PknB_PASTA_kin NF033483
Stk1 family PASTA domain-containing Ser/Thr kinase;
4-163 3.39e-16

Stk1 family PASTA domain-containing Ser/Thr kinase;


Pssm-ID: 468045 [Multi-domain]  Cd Length: 563  Bit Score: 77.53  E-value: 3.39e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEM-------------------------------DEEDS-------- 44
Cdd:NF033483    9 YEIGERIGRGGMAEVYLAKDTRLDRDVAVKVLRPDLardpefvarfrreaqsaaslshpnivsvydvGEDGGipyivmey 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 ----------HRKGsnPRPLEASLvqRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKA 114
Cdd:NF033483   89 vdgrtlkdyiREHG--PLSPEEAV--EIMIQILSALEHAHRNGIVHRDIKPQNILITKD-GRVKVTDFGIARALSSTTMT 163
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YTHEIvtlwyrapevlLGSTHY--------STA---VDIWSVGCIFAEMIRRQALFPGDS 163
Cdd:NF033483  164 QTNSV-----------LGTVHYlspeqargGTVdarSDIYSLGIVLYEMLTGRPPFDGDS 212
TOMM_kin_cyc TIGR03903
TOMM system kinase/cyclase fusion protein; This model represents proteins of 1350 in length, ...
53-168 6.50e-10

TOMM system kinase/cyclase fusion protein; This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein. [Cellular processes, Toxin production and resistance]


Pssm-ID: 274846 [Multi-domain]  Cd Length: 1266  Bit Score: 59.09  E-value: 6.50e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDK--DKGILKIADLGLS------RAFTVPLKAYTHEIV-TLW 123
Cdd:TIGR03903   75 ALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQtgVRPHAKVLDFGIGtllpgvRDADVATLTRTTEVLgTPT 154
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 1063706111  124 YRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSE----FQQL 168
Cdd:TIGR03903  155 YCAPEQLRGEP-VTPNSDLYAWGLIFLECLTGQRVVQGASVaeilYQQL 202
 
Name Accession Description Interval E-value
STKc_CdkB_plant cd07837
Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase; ...
2-242 1.04e-167

Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270830 [Multi-domain]  Cd Length: 294  Bit Score: 464.69  E-value: 1.04e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE--------------------------------------- 42
Cdd:cd07837     1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMEEEgvpstalrevsllqmlsqsiyivrlldvehveengkpll 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 ---------------DSHRKGsNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRA 107
Cdd:cd07837    81 ylvfeyldtdlkkfiDSYGRG-PHNPLPAKTIQSFMYQLCKGVAHCHSHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 108 FTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVM 187
Cdd:cd07837   160 FTIPIKSYTHEIVTLWYRAPEVLLGSTHYSTPVDMWSVGCIFAEMSRKQPLFPGDSELQQLLHIFRLLGTPNEEVWPGVS 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 188 ALRDWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:cd07837   240 KLRDWHEYPQWKPQDLSRAVPDLEPEGVDLLTKMLAYDPAKRISAKAALQHPYFD 294
STKc_CDK1_CdkB_like cd07835
Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases and of ...
4-241 7.97e-156

Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases and of Plant B-type Cyclin-Dependent protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK, CDK2, and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270829 [Multi-domain]  Cd Length: 283  Bit Score: 434.03  E-value: 7.97e-156
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE----------------------------------------- 42
Cdd:cd07835     1 YQKLEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEgvpstaireisllkelnhpnivrlldvvhsenklylvfefl 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 --------DSHRKgsnpRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKA 114
Cdd:cd07835    81 dldlkkymDSSPL----TGLDPPLIKSYLYQLLQGIAFCHSHRVLHRDLKPQNLLIDT-EGALKLADFGLARAFGVPVRT 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRD-WH 193
Cdd:cd07835   156 YTHEVVTLWYRAPEILLGSKHYSTPVDIWSVGCIFAEMVTRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDyKP 235
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 194 VYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07835   236 TFPKWARQDLSKVVPSLDEDGLDLLSQMLVYDPAKRISAKAALQHPYF 283
STKc_CDK_like cd07829
Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; STKs ...
4-241 1.76e-138

Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270823 [Multi-domain]  Cd Length: 282  Bit Score: 389.92  E-value: 1.76e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED---------------SH----------------------- 45
Cdd:cd07829     1 YEKLEKLGEGTYGVVYKAKDKKTGEIVALKKIRLDNEEEGipstalreisllkelKHpnivklldvihtenklylvfeyc 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 ----RK--GSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEI 119
Cdd:cd07829    81 dqdlKKylDKRPGPLPPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNLLINRD-GVLKLADFGLARAFGIPLRTYTHEV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 120 VTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWH-VYPKW 198
Cdd:cd07829   160 VTLWYRAPEILLGSKHYSTAVDIWSVGCIFAELITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKpTFPKW 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 199 EPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07829   240 PKNDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282
STKc_CDK2_3 cd07860
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3; ...
4-241 5.06e-120

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270844 [Multi-domain]  Cd Length: 284  Bit Score: 343.72  E-value: 5.06e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE----------------------------DSHRK-------- 47
Cdd:cd07860     2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEgvpstaireisllkelnhpnivklldviHTENKlylvfefl 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 ---------GSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd07860    82 hqdlkkfmdASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHV-YPK 197
Cdd:cd07860   161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPsFPK 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 198 WEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07860   241 WARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284
PLN00009 PLN00009
cyclin-dependent kinase A; Provisional
1-244 2.51e-113

cyclin-dependent kinase A; Provisional


Pssm-ID: 177649 [Multi-domain]  Cd Length: 294  Bit Score: 326.77  E-value: 2.51e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED---------------SHRK------------------ 47
Cdd:PLN00009    1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGvpstaireisllkemQHGNivrlqdvvhsekrlylvf 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 -----------------GSNPRpleasLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTV 110
Cdd:PLN00009   81 eyldldlkkhmdsspdfAKNPR-----LIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 PLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALR 190
Cdd:PLN00009  156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 191 DWH-VYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:PLN00009  236 DYKsAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290
STKc_CDK1_euk cd07861
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher ...
3-241 4.55e-109

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis as well as neuronal apoptosis in neurodegenerative diseases. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270845 [Multi-domain]  Cd Length: 285  Bit Score: 315.90  E-value: 4.55e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE---------------------------------------- 42
Cdd:cd07861     1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEgvpstaireisllkelqhpnivcledvlmqenrlylvfef 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 ---------DSHRKGsnpRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLK 113
Cdd:cd07861    81 lsmdlkkylDSLPKG---KYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN-KGVIKLADFGLARAFGIPVR 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDW- 192
Cdd:cd07861   157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDIWPGVTSLPDYk 236
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1063706111 193 HVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07861   237 NTFPKWKKGSLRTAVKNLDEDGLDLLEKMLIYDPAKRISAKKALVHPYF 285
STKc_CDK5 cd07839
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5; STKs ...
3-241 5.54e-102

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143344 [Multi-domain]  Cd Length: 284  Bit Score: 297.81  E-value: 5.54e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED----------------------------SHRK------- 47
Cdd:cd07839     1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGvpssalreicllkelkhknivrlydvlhSDKKltlvfey 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 ---------GSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd07839    81 cdqdlkkyfDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVRCYSAE 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRR-QALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHVYPK 197
Cdd:cd07839   160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAgRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 198 WEP-QDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07839   240 YPAtTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284
STKc_CDK7 cd07841
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; STKs ...
3-241 5.45e-101

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270833 [Multi-domain]  Cd Length: 298  Bit Score: 295.64  E-value: 5.45e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLemDEEDSHRKGSNPRPLEA-------------------------S 57
Cdd:cd07841     1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKL--GERKEAKDGINFTALREikllqelkhpniiglldvfghksniN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  58 LVQRFMF------------------------QLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLK 113
Cdd:cd07841    79 LVFEFMEtdlekvikdksivltpadiksymlMTLRGLEYLHSNWILHRDLKPNNLLIASD-GVLKLADFGLARSFGSPNR 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWH 193
Cdd:cd07841   158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 194 VYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07841   238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYF 285
STKc_CDC2L1 cd07843
Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1; STKs catalyze ...
2-241 2.31e-100

Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173741 [Multi-domain]  Cd Length: 293  Bit Score: 294.13  E-value: 2.31e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKtrLEMDEED-----------------SHRK---------GSN----- 50
Cdd:cd07843     5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKK--LKMEKEKegfpitslreinillklQHPNivtvkevvvGSNldkiy 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 -----------------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLK 113
Cdd:cd07843    83 mvmeyvehdlkslmetmKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN-RGILKICDFGLAREYGSPLK 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMAL---- 189
Cdd:cd07843   162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELpgak 241
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 190 -RDWHVYPKWEPQDLSRAvPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07843   242 kKTFTKYPYNQLRKKFPA-LSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293
STKc_PCTAIRE_like cd07844
Catalytic domain of PCTAIRE-like Serine/Threonine Kinases; STKs catalyze the transfer of the ...
4-241 6.52e-99

Catalytic domain of PCTAIRE-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. They share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270835 [Multi-domain]  Cd Length: 286  Bit Score: 290.05  E-value: 6.52e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDE--------EDSHRKG--------------------------- 48
Cdd:cd07844     2 YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEgapftairEASLLKDlkhanivtlhdiihtkktltlvfeyld 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 --------SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYTHEIV 120
Cdd:cd07844    82 tdlkqymdDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS-ERGELKLADFGLARAKSVPSKTYSNEVV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQ-QLLHIFRLLGTPTEQQWPGVMALRDW--HVYPK 197
Cdd:cd07844   161 TLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEdQLHKIFRVLGTPTEETWPGVSSNPEFkpYSFPF 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 198 WEPQDLSRAVPSLS--PEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07844   241 YPPRPLINHAPRLDriPHGEELALKFLQYEPKKRISAAEAMKHPYF 286
STKc_Pho85 cd07836
Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85; ...
4-241 9.32e-98

Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Pho85 is a multifunctional CDK in yeast. It is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143341 [Multi-domain]  Cd Length: 284  Bit Score: 287.07  E-value: 9.32e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE----------------------------------------- 42
Cdd:cd07836     2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGtpstaireislmkelkhenivrlhdvihtenklmlvfeymd 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 -------DSHrkgSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAY 115
Cdd:cd07836    82 kdlkkymDTH---GVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK-RGELKLADFGLARAFGIPVNTF 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHV- 194
Cdd:cd07836   158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPt 237
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 195 YPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07836   238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284
STKc_CDK9_like cd07840
Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; STKs ...
4-241 3.28e-97

Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270832 [Multi-domain]  Cd Length: 291  Bit Score: 286.00  E-value: 3.28e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE-------------------------------MDEEDSHR-KGS-- 49
Cdd:cd07840     1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEnekegfpitaireikllqkldhpnvvrlkeiVTSKGSAKyKGSiy 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 ---------------NPR-PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLK 113
Cdd:cd07840    81 mvfeymdhdltglldNPEvKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN-NDGVLKLADFGLARPYTKENN 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 A-YTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDW 192
Cdd:cd07840   160 AdYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFTGKPIFQGKTELEQLEKIFELCGSPTEENWPGVSDLPWF 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 193 -HVYPKWEPQDLSRAVPS--LSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07840   240 eNLKPKKPYKRRLREVFKnvIDPSALDLLDKLLTLDPKKRISADQALQHEYF 291
STKc_CCRK cd07832
Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase; STKs catalyze the ...
3-241 1.17e-92

Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed; this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270826 [Multi-domain]  Cd Length: 287  Bit Score: 274.21  E-value: 1.17e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE--------------------------DSHRKGSN------ 50
Cdd:cd07832     1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRKLEGgipnqalreikalqacqghpyvvklrDVFPHGTGfvlvfe 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 -------------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVP-LKAYT 116
Cdd:cd07832    81 ymlsslsevlrdeERPLTEAQVKRYMRMLLKGVAYMHANRIMHRDLKPANLLIS-STGVLKIADFGLARLFSEEdPRLYS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWH--V 194
Cdd:cd07832   160 HQVATRWYRAPELLYGSRKYDEGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVLRTLGTPNEKTWPELTSLPDYNkiT 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 195 YPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07832   240 FPESKGIRLEEIFPDCSPEAIDLLKGLLVYNPKKRLSAEEALRHPYF 286
STKc_CDK4_6_like cd07838
Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases; ...
4-241 1.67e-92

Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinases activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270831 [Multi-domain]  Cd Length: 287  Bit Score: 273.77  E-value: 1.67e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE----------------------------------------- 42
Cdd:cd07838     1 YEEVAEIGEGAYGTVYKARDLQDGRFVALKKVRVPLSEEgiplstireiallkqlesfehpnvvrlldvchgprtdrelk 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 ----------DSHRKGSN-PRP-LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTV 110
Cdd:cd07838    81 ltlvfehvdqDLATYLDKcPKPgLPPETIKDLMRQLLRGLDFLHSHRIVHRDLKPQNILVTSD-GQVKLADFGLARIYSF 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 PLkAYTHEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALR 190
Cdd:cd07838   160 EM-ALTSVVVTLWYRAPEVLLQSS-YATPVDMWSVGCIFAELFNRRPLFRGSSEADQLGKIFDVIGLPSEEEWPRNSALP 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 191 dWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07838   238 -RSSFPSYTPRPFKSFVPEIDEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287
STKc_PCTAIRE3 cd07871
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase; STKs catalyze the transfer ...
1-241 2.68e-90

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles. In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270853 [Multi-domain]  Cd Length: 288  Bit Score: 268.42  E-value: 2.68e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDE--------EDS---HRKGSNPRPL------EASL----- 58
Cdd:cd07871     4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEgapctairEVSllkNLKHANIVTLhdiihtERCLtlvfe 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 ---------------------VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYTH 117
Cdd:cd07871    84 yldsdlkqyldncgnlmsmhnVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN-EKGELKLADFGLARAKSVPTKTYSN 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHVY-- 195
Cdd:cd07871   163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGVTSNEEFRSYlf 242
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 196 PKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07871   243 PQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288
STKc_PCTAIRE1 cd07873
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase; STKs catalyze the transfer ...
1-244 1.14e-85

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270854 [Multi-domain]  Cd Length: 297  Bit Score: 256.85  E-value: 1.14e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDE--------EDS---HRKGSNPRPL------EASL----- 58
Cdd:cd07873     1 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEgapctairEVSllkDLKHANIVTLhdiihtEKSLtlvfe 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 ---------------------VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYTH 117
Cdd:cd07873    81 yldkdlkqylddcgnsinmhnVKLFLFQLLRGLAYCHRRKVLHRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYSN 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDW--HVY 195
Cdd:cd07873   160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFksYNY 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1063706111 196 PKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:cd07873   240 PKYRADALHNHAPRLDSDGADLLSKLLQFEGRKRISAEEAMKHPYFHSL 288
STKc_MAPK cd07834
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase; STKs ...
3-244 1.25e-83

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270828 [Multi-domain]  Cd Length: 329  Bit Score: 252.83  E-value: 1.25e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKK-----------------------------TRLE--------------- 38
Cdd:cd07834     1 RYELLKPIGSGAYGVVCSAYDKRTGRKVAIKKisnvfddlidakrilreikilrhlkheniIGLLdilrppspeefndvy 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  39 --MD--EEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFTVPLKA 114
Cdd:cd07834    81 ivTElmETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAGVIHRDLKPSNILVNSNC-DLKICDFGLARGVDPDEDK 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 Y--THEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQ--QWPGVMALR 190
Cdd:cd07834   160 GflTEYVVTRWYRAPELLLSSKKYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEdlKFISSEKAR 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 191 DWhVY--PKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:cd07834   240 NY-LKslPKKPKKPLSEVFPGASPEAIDLLEKMLVFNPKKRITADEALAHPYLAQL 294
STKc_CDK10 cd07845
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10; STKs ...
4-241 4.02e-83

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173742 [Multi-domain]  Cd Length: 309  Bit Score: 250.75  E-value: 4.02e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRleMDEE-----------------------------------DS---- 44
Cdd:cd07845     9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVR--MDNErdgipisslreitlllnlrhpnivelkevvvgkhlDSiflv 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 -----HRKGS----NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAY 115
Cdd:cd07845    87 meyceQDLASlldnMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT-DKGCLKIADFGLARTYGLPAKPM 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHVY 195
Cdd:cd07845   166 TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKF 245
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 196 --PKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07845   246 tlPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293
STKc_GSK3 cd14137
The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; STKs catalyze ...
3-244 2.24e-80

The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GSK3 is a mutifunctional kinase involved in many cellular processes including cell division, proliferation, differentiation, adhesion, and apoptosis. In plants, GSK3 plays a role in the response to osmotic stress. In Caenorhabditis elegans, it plays a role in regulating normal oocyte-to-embryo transition and response to oxidative stress. In Chlamydomonas reinhardtii, GSK3 regulates flagellar length and assembly. In mammals, there are two isoforms, GSK3alpha and GSK3beta, which show both distinct and redundant functions. The two isoforms differ mainly in their N-termini. They are both involved in axon formation and in Wnt signaling.They play distinct roles in cardiogenesis, with GSKalpha being essential in cardiomyocyte survival, and GSKbeta regulating heart positioning and left-right symmetry. GSK3beta was first identified as a regulator of glycogen synthesis, but has since been determined to play other roles. It regulates the degradation of beta-catenin and IkB. Beta-catenin is the main effector of Wnt, which is involved in normal haematopoiesis and stem cell function. IkB is a central inhibitor of NF-kB, which is critical in maintaining leukemic cell growth. GSK3beta is enriched in the brain and is involved in regulating neuronal signaling pathways. It is implicated in the pathogenesis of many diseases including Type II diabetes, obesity, mood disorders, Alzheimer's disease, osteoporosis, and some types of cancer, among others. The GSK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271039 [Multi-domain]  Cd Length: 293  Bit Score: 243.18  E-value: 2.24e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKT--------R-LEMDEEDSHR-----------KGSNP----------- 51
Cdd:cd14137     5 SYTIEKVIGSGSFGVVYQAKLLETGEVVAIKKVlqdkryknReLQIMRRLKHPnivklkyffysSGEKKdevylnlvmey 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 ----------------RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGlSRAFTVPLKAY 115
Cdd:cd14137    85 mpetlyrvirhysknkQTIPIIYVKLYSYQLFRGLAYLHSLGICHRDIKPQNLLVDPETGVLKLCDFG-SAKRLVPGEPN 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQwpgvmaLRDWHV- 194
Cdd:cd14137   164 VSYICSRYYRAPELIFGATDYTTAIDIWSAGCVLAELLLGQPLFPGESSVDQLVEIIKVLGTPTREQ------IKAMNPn 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 195 -----YPKWEPQDLSRAVPS-LSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:cd14137   238 ytefkFPQIKPHPWEKVFPKrTPPDAIDLLSKILVYNPSKRLTALEALAHPFFDEL 293
STKc_CMGC cd05118
Catalytic domain of CMGC family Serine/Threonine Kinases; STKs catalyze the transfer of the ...
4-241 1.45e-79

Catalytic domain of CMGC family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and other kinases. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Other members of the CMGC family include casein kinase 2 (CK2), Dual-specificity tYrosine-phosphorylated and -Regulated Kinase (DYRK), Glycogen Synthase Kinase 3 (GSK3), among many others. The CMGC family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270688 [Multi-domain]  Cd Length: 249  Bit Score: 239.44  E-value: 1.45e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR----------------------------LEMDEEDSHRKGS------ 49
Cdd:cd05118     1 YEVLRKIGEGAFGTVWLARDKVTGEKVAIKKIKndfrhpkaalreikllkhlndveghpniVKLLDVFEHRGGNhlclvf 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 -------------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPlkAYT 116
Cdd:cd05118    81 elmgmnlyelikdYPRGLPLDLIKSYLYQLLQALDFLHSNGIIHRDLKPENILINLELGQLKLADFGLARSFTSP--PYT 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTpteqqwpgvmalrdwhvyp 196
Cdd:cd05118   159 PYVATRWYRAPEVLLGAKPYGSSIDIWSLGCILAELLTGRPLFPGDSEVDQLAKIVRLLGT------------------- 219
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 197 kwepqdlsravpslsPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd05118   220 ---------------PEALDLLSKMLKYDPAKRITASQALAHPYF 249
STKc_MAK_like cd07830
Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases; STKs ...
4-241 7.38e-79

Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia, suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270824 [Multi-domain]  Cd Length: 283  Bit Score: 238.97  E-value: 7.38e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEE-----------------------DSHR------------ 46
Cdd:cd07830     1 YKVIKQLGDGTFGSVYLARNKETGELVAIKkmKKKFYSWEEcmnlrevkslrklnehpnivklkEVFRendelyfvfeym 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 --------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAfTVPLKAYTHE 118
Cdd:cd07830    81 egnlyqlmKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP-EVVKIADFGLARE-IRSRPPYTDY 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMAL-RDW-HVYP 196
Cdd:cd07830   159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLaSKLgFRFP 238
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 197 KWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07830   239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283
STKc_PCTAIRE2 cd07872
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase; STKs catalyze the transfer ...
1-244 2.17e-78

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143377 [Multi-domain]  Cd Length: 309  Bit Score: 238.74  E-value: 2.17e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE---DSHRKGSNPRPL--------------EASL----- 58
Cdd:cd07872     5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGapcTAIREVSLLKDLkhanivtlhdivhtDKSLtlvfe 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 ---------------------VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYTH 117
Cdd:cd07872    85 yldkdlkqymddcgnimsmhnVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTYSN 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHVY-- 195
Cdd:cd07872   164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYnf 243
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1063706111 196 PKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:cd07872   244 PKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
4-241 1.70e-76

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 232.04  E-value: 1.70e-76
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111    4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE-------------------------------------------MD 40
Cdd:smart00220   1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKkikkdrerilreikilkklkhpnivrlydvfededklylvmeyCE 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   41 EEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYThEIV 120
Cdd:smart00220  81 GGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDED-GHVKLADFGLARQLDPGEKLTT-FVG 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  121 TLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSefqQLLHIFRLLGTPTEQQWPgvmalrdwhvypkwep 200
Cdd:smart00220 159 TPEYMAPEVLLG-KGYGKAVDIWSLGVILYELLTGKPPFPGDD---QLLELFKKIGKPKPPFPP---------------- 218
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|.
gi 1063706111  201 qdlsrAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:smart00220 219 -----PEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
STKc_BUR1 cd07866
Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase (CDK), ...
4-241 2.18e-76

Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase (CDK), Bypass UAS Requirement 1, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BUR1, also called SGV1, is a yeast CDK that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270849 [Multi-domain]  Cd Length: 311  Bit Score: 233.75  E-value: 2.18e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKK------------TRL------------------EM----DEEDSHRKGS 49
Cdd:cd07866    10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKilmhnekdgfpiTALreikilkklkhpnvvpliDMaverPDKSKRKRGS 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 -----------------NPR-PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVP 111
Cdd:cd07866    90 vymvtpymdhdlsglleNPSvKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILID-NQGILKIADFGLARPYDGP 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 112 -----------LKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTE 180
Cdd:cd07866   169 ppnpkggggggTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTE 248
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 181 QQWPGVMAL---RDWHVYPKWEPQdLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07866   249 ETWPGWRSLpgcEGVHSFTNYPRT-LEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311
STKc_PFTAIRE2 cd07870
Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase; STKs catalyze the transfer ...
4-241 2.82e-76

Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. It shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270852 [Multi-domain]  Cd Length: 286  Bit Score: 232.54  E-value: 2.82e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDE--------EDSHRKG--------------------------- 48
Cdd:cd07870     2 YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEgvpftairEASLLKGlkhanivllhdiihtketltfvfeymh 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 --------SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHEIV 120
Cdd:cd07870    82 tdlaqymiQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY-LGELKLADFGLARAKSIPSQTYSSEVV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSE-FQQLLHIFRLLGTPTEQQWPGVMALRDWHvyPKW- 198
Cdd:cd07870   161 TLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDvFEQLEKIWTVLGVPTEDTWPGVSKLPNYK--PEWf 238
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 199 ---EPQDLSRAVPSLS--PEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07870   239 lpcKPQQLRVVWKRLSrpPKAEDLASQMLMMFPKDRISAQDALLHPYF 286
STKc_CDKL cd07833
Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs ...
2-241 1.13e-74

Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270827 [Multi-domain]  Cd Length: 288  Bit Score: 228.36  E-value: 1.13e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSH--------------------------RKG------- 48
Cdd:cd07833     1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKktalrevkvlrqlrhenivnlkeafrRKGrlylvfe 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 -----------SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTV-PLKAYT 116
Cdd:cd07833    81 yvertllelleASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSES-GVLKLCDFGFARALTArPASPLT 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQwpGVMALRDWH--- 193
Cdd:cd07833   160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSH--QELFSSNPRfag 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 194 --VYPKWEPQDLSRAVPS-LSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07833   238 vaFPEPSQPESLERRYPGkVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288
STKc_CDK8_like cd07842
Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases; STKs ...
3-241 1.01e-72

Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270834 [Multi-domain]  Cd Length: 316  Bit Score: 224.47  E-value: 1.01e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKT--TGKLVALKKTRLEMDEEDS------------------------------------ 44
Cdd:cd07842     1 KYEIEGCIGRGTYGRVYKAKRKNgkDGKEYAIKKFKGDKEQYTGisqsacreiallrelkhenvvslvevflehadksvy 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 ----------------HRKgSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL---DKDKGILKIADLGLS 105
Cdd:cd07842    81 llfdyaehdlwqiikfHRQ-AKRVSIPPSMVKSLLWQILNGIHYLHSNWVLHRDLKPANILVmgeGPERGVVKIGDLGLA 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 106 RAFTVPLKAYTHE---IVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSE-------FQ--QLLHIFR 173
Cdd:cd07842   160 RLFNAPLKPLADLdpvVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAkikksnpFQrdQLERIFE 239
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 174 LLGTPTEQQWPGVMALRDWH---------VYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07842   240 VLGTPTEKDWPDIKKMPEYDtlksdtkasTYPNSLLAKWMHKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316
PTZ00024 PTZ00024
cyclin-dependent protein kinase; Provisional
2-243 4.20e-72

cyclin-dependent protein kinase; Provisional


Pssm-ID: 240233 [Multi-domain]  Cd Length: 335  Bit Score: 223.48  E-value: 4.20e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEK-VGEGTYGKVYKAMEKTTGKLVALKKTR-------------------------------------------- 36
Cdd:PTZ00024    8 ERYIQKGAhLGEGTYGKVEKAYDTLTGKIVAIKKVKiieisndvtkdrqlvgmcgihfttlrelkimneikhenimglvd 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  37 ---------LEMDEEDSHRK---GSNPRpLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGL 104
Cdd:PTZ00024   88 vyvegdfinLVMDIMASDLKkvvDRKIR-LTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN-SKGICKIADFGL 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 105 SRAFTVPL--------------KAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLH 170
Cdd:PTZ00024  166 ARRYGYPPysdtlskdetmqrrEEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGR 245
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 171 IFRLLGTPTEQQWPGVMALRDWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDS 243
Cdd:PTZ00024  246 IFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKS 318
STKc_MAPK15-like cd07852
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 and ...
2-249 8.94e-71

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 and similar MAPKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. MAPKs are important mediators of cellular responses to extracellular signals. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270841 [Multi-domain]  Cd Length: 337  Bit Score: 220.12  E-value: 8.94e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKT------------------------------------RLEMD----- 40
Cdd:cd07852     7 RRYEILKKLGKGAYGIVWKAIDKKTGEVVALKKIfdafrnatdaqrtfreimflqelndhpniikllnviRAENDkdiyl 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  41 -----EEDSH---RKGSnprpLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFT--- 109
Cdd:cd07852    87 vfeymETDLHaviRANI----LEDIHKQYIMYQLLKALKYLHSGGVIHRDLKPSNILLNSDCRV-KLADFGLARSLSqle 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 110 --VPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQ-----Q 182
Cdd:cd07852   162 edDENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGRPSAEdiesiQ 241
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 183 WPGVMALRDWHVYPKwePQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFdsldkSQF 249
Cdd:cd07852   242 SPFAATMLESLPPSR--PKSLDELFPKASPDALDLLKKLLVFNPNKRLTAEEALRHPYV-----AQF 301
STKc_CDK4 cd07863
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4; STKs ...
3-241 6.53e-70

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of TGF-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143368 [Multi-domain]  Cd Length: 288  Bit Score: 216.37  E-value: 6.53e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE------------------------------------DSHR 46
Cdd:cd07863     1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDglplstvrevallkrleafdhpnivrlmdvcatsrtDRET 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 K----------------GSNPRP-LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFT 109
Cdd:cd07863    81 KvtlvfehvdqdlrtylDKVPPPgLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-TSGGQVKLADFGLARIYS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 110 VPLkAYTHEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMAL 189
Cdd:cd07863   160 CQM-ALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTL 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 190 RDwHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07863   238 PR-GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288
STKc_CDK9 cd07865
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9; STKs ...
3-241 8.44e-67

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK9, together with a cyclin partner (cyclin T1, T2a, T2b, or K), is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270848 [Multi-domain]  Cd Length: 310  Bit Score: 209.15  E-value: 8.44e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED---------------SH--------------RKGSNPRP 53
Cdd:cd07865    13 KYEKLAKIGQGTFGEVFKARHRKTGQIVALKKVLMENEKEGfpitalreikilqllKHenvvnlieicrtkaTPYNRYKG 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 -----------------------LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTV 110
Cdd:cd07865    93 siylvfefcehdlagllsnknvkFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKD-GVLKLADFGLARAFSL 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 PLKA----YTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGV 186
Cdd:cd07865   172 AKNSqpnrYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGV 251
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 187 MALrdwHVYPKWE-PQDLSRAVPSL------SPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07865   252 DKL---ELFKKMElPQGQKRKVKERlkpyvkDPYALDLIDKLLVLDPAKRIDADTALNHDFF 310
STKc_PFTAIRE1 cd07869
Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase; STKs catalyze the transfer ...
2-244 4.40e-66

Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143374 [Multi-domain]  Cd Length: 303  Bit Score: 207.24  E-value: 4.40e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDE--------EDSHRKG------------------------- 48
Cdd:cd07869     5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEgtpftairEASLLKGlkhanivllhdiihtketltlvfey 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 ----------SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd07869    85 vhtdlcqymdKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI-SDTGELKLADFGLARAKSVPSHTYSNE 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQ-QLLHIFRLLGTPTEQQWPGVMALRdwHVYPK 197
Cdd:cd07869   164 VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQdQLERIFLVLGTPNEDTWPGVHSLP--HFKPE 241
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 198 ----WEPQDLSRAVPSLS--PEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:cd07869   242 rftlYSPKNLRQAWNKLSyvNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294
STKc_ERK5 cd07855
Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5; ...
2-241 5.50e-65

Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ERK5 (also called Big MAPK1 (BMK1) or MAPK7) has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. MAPKs are important mediators of cellular responses to extracellular signals. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270842 [Multi-domain]  Cd Length: 336  Bit Score: 205.29  E-value: 5.50e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR--------------------------------------------- 36
Cdd:cd07855     5 DRYEPIETIGSGAYGVVCSAIDTKSGQKVAIKKIPnafdvvttakrtlrelkilrhfkhdniiairdilrpkvpyadfkd 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  37 ----LEMDEEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRA---FT 109
Cdd:cd07855    85 vyvvLDLMESDLHHIIHSDQPLTLEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEN-CELKIGDFGMARGlctSP 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 110 VPLKAY-THEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQwpgVMA 188
Cdd:cd07855   164 EEHKYFmTEYVATRWYRAPELMLSLPEYTQAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLQLILTVLGTPSQAV---INA 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1063706111 189 LRDWHVY------PKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07855   241 IGADRVRryiqnlPNKQPVPWETLYPKADQQALDLLSQMLRFDPSERITVAEALQHPFL 299
STKc_CDKL1_4 cd07847
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4; ...
2-241 1.10e-63

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL1/4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270837 [Multi-domain]  Cd Length: 286  Bit Score: 200.29  E-value: 1.10e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTrLEMDEEDSHRK---------------------------------- 47
Cdd:cd07847     1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKF-VESEDDPVIKKialreirmlkqlkhpnlvnlievfrrkrklhlvf 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 -----------GSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYT 116
Cdd:cd07847    80 eycdhtvlnelEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQ-GQIKLCDFGFARILTGPGDDYT 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLG--TPTEQQwpgVMALRDW-H 193
Cdd:cd07847   159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGdlIPRHQQ---IFSTNQFfK 235
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 194 VYPKWEPQD---LSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07847   236 GLSIPEPETrepLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286
STKc_MOK cd07831
Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase; STKs ...
4-241 1.94e-63

Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270825 [Multi-domain]  Cd Length: 282  Bit Score: 199.42  E-value: 1.94e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEEDSH--------RKGSNP---------------------- 51
Cdd:cd07831     1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKcmKKHFKSLEQVNNlreiqalrRLSPHPnilrlievlfdrktgrlalvfe 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 --------------RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkgILKIADLGLSRAFTVPLkAYTH 117
Cdd:cd07831    81 lmdmnlyelikgrkRPLPEKRVKNYMYQLLKSLDHMHRNGIFHRDIKPENILIKDD--ILKLADFGSCRGIYSKP-PYTE 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTeqqwPGVMA-LRDWHV-- 194
Cdd:cd07831   158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPD----AEVLKkFRKSRHmn 233
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1063706111 195 --YPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07831   234 ynFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282
STKc_CDK6 cd07862
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6; STKs ...
2-241 3.79e-63

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270846 [Multi-domain]  Cd Length: 290  Bit Score: 199.10  E-value: 3.79e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAME-KTTGKLVALKKTRLEMDEE----DSHRKGSNPRPLEA-------------------- 56
Cdd:cd07862     1 QQYECVAEIGEGAYGKVFKARDlKNGGRFVALKRVRVQTGEEgmplSTIREVAVLRHLETfehpnvvrlfdvctvsrtdr 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  57 -----------------------------SLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRA 107
Cdd:cd07862    81 etkltlvfehvdqdlttyldkvpepgvptETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV-TSSGQIKLADFGLARI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 108 FTVPLkAYTHEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVM 187
Cdd:cd07862   160 YSFQM-ALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 188 ALRDWHVYPKwEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07862   238 ALPRQAFHSK-SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290
STKc_CDK12 cd07864
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12; STKs ...
1-240 1.56e-62

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an RS domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270847 [Multi-domain]  Cd Length: 302  Bit Score: 198.10  E-value: 1.56e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED---------------SHRKGSNPRP------------ 53
Cdd:cd07864     6 VDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEGfpitaireikilrqlNHRSVVNLKEivtdkqdaldfk 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 --------------------LEASLV-------QRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSR 106
Cdd:cd07864    86 kdkgafylvfeymdhdlmglLESGLVhfsedhiKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN-NKGQIKLADFGLAR 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 107 AFTV-PLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPG 185
Cdd:cd07864   165 LYNSeESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPD 244
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 186 VMALRDWHVY-PKWEPQDLSRAVPSLSP-EGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd07864   245 VIKLPYFNTMkPKKQYRRRLREEFSFIPtPALDLLDHMLTLDPSKRCTAEQALNSPW 301
STKc_TEY_MAPK cd07858
Catalytic domain of the Serine/Threonine Kinases, Plant TEY Mitogen-Activated Protein Kinases; ...
3-244 2.01e-62

Catalytic domain of the Serine/Threonine Kinases, Plant TEY Mitogen-Activated Protein Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Plant MAPKs are typed based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype of plant MAPKs and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs; Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143363 [Multi-domain]  Cd Length: 337  Bit Score: 198.75  E-value: 2.01e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKK-------------TRLE------MDEE--------------------- 42
Cdd:cd07858     6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKianafdnridakrTLREikllrhLDHEnviaikdimppphreafndvy 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 --------DSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSRAFTVPLKA 114
Cdd:cd07858    86 ivyelmdtDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSEKGDF 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMA------ 188
Cdd:cd07858   165 MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNekarry 244
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 189 LRDWHVYPKwepQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:cd07858   245 IRSLPYTPR---QSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297
STKc_CDKL2_3 cd07846
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3; ...
2-241 2.39e-61

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270836 [Multi-domain]  Cd Length: 286  Bit Score: 194.56  E-value: 2.39e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTrLEMDEEDSHRK---------------------------------- 47
Cdd:cd07846     1 EKYENLGLVGEGSYGMVMKCRHKETGQIVAIKKF-LESEDDKMVKKiamreikmlkqlrhenlvnlievfrrkkrwylvf 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 -----------GSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYT 116
Cdd:cd07846    80 efvdhtvlddlEKYPNGLDESRVRKYLFQILRGIDFCHSHNIIHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGEVYT 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGT--PTEQQW----PGVMALR 190
Cdd:cd07846   159 DYVATRWYRAPELLVGDTKYGKAVDVWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNliPRHQELfqknPLFAGVR 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 191 DWHVYpkwEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07846   239 LPEVK---EVEPLERRYPKLSGVVIDLAKKCLHIDPDKRPSCSELLHHEFF 286
STKc_ERK1_2_like cd07849
Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine ...
2-240 5.80e-58

Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270839 [Multi-domain]  Cd Length: 336  Bit Score: 187.13  E-value: 5.80e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKK--------------------------------------TRLEMD--- 40
Cdd:cd07849     5 PRYQNLSYIGEGAYGMVCSAVHKPTGQKVAIKKispfehqtyclrtlreikillrfkheniigildiqrppTFESFKdvy 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  41 ------EEDSHRKGSNpRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDK--DkgiLKIADLGLSRAfTVPL 112
Cdd:cd07849    85 ivqelmETDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTncD---LKICDFGLARI-ADPE 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 113 KAY----THEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMA 188
Cdd:cd07849   160 HDHtgflTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGILGTPSQEDLNCIIS 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 189 LRDwHVY----PKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd07849   240 LKA-RNYikslPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY 294
STKc_NLK cd07853
Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer ...
38-242 9.47e-58

Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NLK is an atypical mitogen-activated protein kinase (MAPK) that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. MAPKs are important mediators of cellular responses to extracellular signals. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173748 [Multi-domain]  Cd Length: 372  Bit Score: 187.64  E-value: 9.47e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  38 EMDEEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTV-PLKAYT 116
Cdd:cd07853    84 ELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN-CVLKICDFGLARVEEPdESKHMT 162
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHVY- 195
Cdd:cd07853   163 QEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILr 242
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 196 PKWEPQDLSRAVPSLSP---EGIDLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:cd07853   243 GPHKPPSLPVLYTLSSQathEAVHLLCRMLVFDPDKRISAADALAHPYLD 292
STKc_p38 cd07851
Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase; STKs ...
2-241 2.05e-54

Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143356 [Multi-domain]  Cd Length: 343  Bit Score: 178.26  E-value: 2.05e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKK-----------------TRL--EMDEED------------------- 43
Cdd:cd07851    15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKlsrpfqsaihakrtyreLRLlkHMKHENviglldvftpassledfqd 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 ----SHRKGSN------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSRAFTVPLK 113
Cdd:cd07851    95 vylvTHLMGADlnnivkCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYtheIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVM--ALRD 191
Cdd:cd07851   174 GY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLKKISseSARN 250
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 192 W-HVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07851   251 YiQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYL 301
STKc_MPK1 cd07857
Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1; ...
38-240 8.87e-54

Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. MAPKs are important mediators of cellular responses to extracellular signals. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173750 [Multi-domain]  Cd Length: 332  Bit Score: 176.44  E-value: 8.87e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  38 EMDEEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKA--- 114
Cdd:cd07857    86 ELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNAD-CELKICDFGLARGFSENPGEnag 164
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 -YTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDW- 192
Cdd:cd07857   165 fMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQn 244
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 193 --HVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd07857   245 yiRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294
STKc_CK2_alpha cd14132
Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2; STKs catalyze the ...
1-242 7.48e-53

Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CK2 is a tetrameric protein with two catalytic (alpha) and two regulatory (beta) subunits. It is constitutively active and ubiquitously expressed, and is found in the cytoplasm, nucleus, as well as in the plasma membrane. It phosphorylates a wide variety of substrates including gylcogen synthase, cell cycle proteins, nuclear proteins (e.g. DNA topoisomerase II), and ion channels (e.g. ENaC), among others. It may be considered a master kinase controlling the activity or lifespan of many other kinases and exerting its effect over cell fate, gene expression, protein synthesis and degradation, and viral infection. CK2 is implicated in every stage of the cell cycle and is required for cell cycle progression. It plays crucial roles in cell differentiation, proliferation, and survival, and is thus implicated in cancer. CK2 is not an oncogene by itself but elevated CK2 levels create an environment that enhances the survival of tumor cells. The CK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271034 [Multi-domain]  Cd Length: 306  Bit Score: 173.11  E-value: 7.48e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK--------KTRLE----------------MD---EEDS--------H 45
Cdd:cd14132    17 QDDYEIIRKIGRGKYSEVFEGINIGNNEKVVIKvlkpvkkkKIKREikilqnlrggpnivklLDvvkDPQSktpslifeY 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 RKGSNPRPLEASL----VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRaFTVPLKAYTHEIVT 121
Cdd:cd14132    97 VNNTDFKTLYPTLtdydIRYYMYELLKALDYCHSKGIMHRDVKPHNIMIDHEKRKLRLIDWGLAE-FYHPGQEYNVRVAS 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 122 LWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMI-RRQALFPGDSEFQQLLHIFRLLGT---------------PTEQQWPG 185
Cdd:cd14132   176 RYYKGPELLVDYQYYDYSLDMWSLGCMLASMIfRKEPFFHGHDNYDQLVKIAKVLGTddlyayldkygielpPRLNDILG 255
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 186 VMALRDWHVYPKWEPQDLsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:cd14132   256 RHSKKPWERFVNSENQHL------VTPEALDLLDKLLRYDHQERITAKEAMQHPYFD 306
STKc_Sty1_Hog1 cd07856
Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases ...
2-240 3.43e-50

Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. It is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response. Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. MAPKs are important mediators of cellular responses to extracellular signals. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270843 [Multi-domain]  Cd Length: 328  Bit Score: 166.98  E-value: 3.43e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR--------------------------------------------L 37
Cdd:cd07856    10 TRYSDLQPVGMGAFGLVCSARDQLTGQNVAVKKIMkpfstpvlakrtyrelkllkhlrheniislsdifisplediyfvT 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  38 EMDEEDSHRKGSNpRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSRAFTVPLKAYth 117
Cdd:cd07856    90 ELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVIHRDLKPSNILVNENCD-LKICDFGLARIQDPQMTGY-- 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 eIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMA---LRDWHV 194
Cdd:cd07856   166 -VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTICSentLRFVQS 244
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 195 YPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd07856   245 LPKRERVPFSEKFKNADPDAIDLLEKMLVFDPKKRISAAEALAHPY 290
PTZ00036 PTZ00036
glycogen synthase kinase; Provisional
50-244 3.95e-50

glycogen synthase kinase; Provisional


Pssm-ID: 173333 [Multi-domain]  Cd Length: 440  Bit Score: 169.83  E-value: 3.95e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKAYTHeIVTLWYRAPEV 129
Cdd:PTZ00036  163 NNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSY-ICSRFYRAPEL 241
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 130 LLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQW----PGVMALRdwhvYPKWEPQDLSR 205
Cdd:PTZ00036  242 MLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLkemnPNYADIK----FPDVKPKDLKK 317
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1063706111 206 AVPSLSP-EGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:PTZ00036  318 VFPKGTPdDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357
STKc_p38delta cd07879
Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase ...
2-244 7.11e-50

Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase (also called MAPK13); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38delta/MAPK13 is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. p38 kinases are MAPKs, serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143384 [Multi-domain]  Cd Length: 342  Bit Score: 166.62  E-value: 7.11e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED------------SHRKGSN------------------- 50
Cdd:cd07879    15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIfakrayreltllKHMQHENviglldvftsavsgdefqd 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 ----------------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSRAFTVPLKA 114
Cdd:cd07879    95 fylvmpymqtdlqkimGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCE-LKILDFGLARHADAEMTG 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YtheIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTE---QQWPGVMALRD 191
Cdd:cd07879   174 Y---VVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPefvQKLEDKAAKSY 250
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 192 WHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:cd07879   251 IKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303
STKc_p38gamma cd07880
Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase ...
2-244 1.54e-49

Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase (also called MAPK12); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38gamma/MAPK12 is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. p38 kinases are MAPKs, serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143385 [Multi-domain]  Cd Length: 343  Bit Score: 165.90  E-value: 1.54e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKT-----------------RL--EMDEED------------------- 43
Cdd:cd07880    15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLyrpfqselfakrayrelRLlkHMKHENviglldvftpdlsldrfhd 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 ----------------SHRKGSNPRpleaslVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSRA 107
Cdd:cd07880    95 fylvmpfmgtdlgklmKHEKLSEDR------IQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCE-LKILDFGLARQ 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 108 FTVPLKAYtheIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTeQQWPGVM 187
Cdd:cd07880   168 TDSEMTGY---VVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPS-KEFVQKL 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 188 ALRDWHVY----PKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:cd07880   244 QSEDAKNYvkklPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304
STKc_p38beta cd07878
Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase ...
2-241 1.64e-48

Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase (also called MAPK11); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38beta/MAPK11 is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143383 [Multi-domain]  Cd Length: 343  Bit Score: 163.30  E-value: 1.64e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKK----------TRLEMDEED--SHRKGSNPRPL--------------E 55
Cdd:cd07878    15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKlsrpfqslihARRTYRELRllKHMKHENVIGLldvftpatsienfnE 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  56 ASLVQRFM----------------------FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSRAFTVPLK 113
Cdd:cd07878    95 VYLVTNLMgadlnnivkcqklsdehvqfliYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE-LRILDFGLARQADDEMT 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYtheIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVM---ALR 190
Cdd:cd07878   174 GY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISsehARK 250
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 191 DWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07878   251 YIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYF 301
STKc_TDY_MAPK cd07859
Catalytic domain of the Serine/Threonine Kinases, Plant TDY Mitogen-Activated Protein Kinases; ...
3-246 4.59e-48

Catalytic domain of the Serine/Threonine Kinases, Plant TDY Mitogen-Activated Protein Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Plant MAPKs are typed based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs; Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20 while Oryza sativa contains at least 17 MAPKs. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143364 [Multi-domain]  Cd Length: 338  Bit Score: 161.87  E-value: 4.59e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKK-----------TRL---------------------------------- 37
Cdd:cd07859     1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKindvfehvsdaTRIlreikllrllrhpdiveikhimlppsrrefkdiy 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  38 ---EMDEEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSR-AF--TVP 111
Cdd:cd07859    81 vvfELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARvAFndTPT 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 112 LKAYTHEIVTLWYRAPEvLLGS--THYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGV--- 186
Cdd:cd07859   160 AIFWTDYVATRWYRAPE-LCGSffSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVrne 238
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 187 MALRDWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSLDK 246
Cdd:cd07859   239 KARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298
STKc_MAPK4_6 cd07854
Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also ...
53-241 1.52e-47

Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK4 (also called ERK4 or p63MAPK) and MAPK6 (also called ERK3 or p97MAPK) are atypical MAPKs that are not regulated by MAPK kinases. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. MAPKs are important mediators of cellular responses to extracellular signals. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143359 [Multi-domain]  Cd Length: 342  Bit Score: 160.33  E-value: 1.52e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTvplKAYTHE------IVTLWYRA 126
Cdd:cd07854   110 PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVD---PHYSHKgylsegLVTKWYRS 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 127 PEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFR---LLGTPTEQQWPGVMA--LRDWHVYPKWEPQ 201
Cdd:cd07854   187 PRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILEsvpVVREEDRNELLNVIPsfVRNDGGEPRRPLR 266
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1063706111 202 DLsraVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07854   267 DL---LPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM 303
STKc_p38alpha cd07877
Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase ...
2-241 3.38e-47

Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase (also called MAPK14); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38alpha/MAPK14 is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. p38 kinases MAPKs, serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143382 [Multi-domain]  Cd Length: 345  Bit Score: 159.82  E-value: 3.38e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKT-----------------RL--EMDEED------------------- 43
Cdd:cd07877    17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLsrpfqsiihakrtyrelRLlkHMKHENviglldvftparsleefnd 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 ----SHRKGSN------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSRAFTVPLK 113
Cdd:cd07877    97 vylvTHLMGADlnnivkCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYtheIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTE---QQWPGVMALR 190
Cdd:cd07877   176 GY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAellKKISSESARN 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 191 DWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07877   253 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 303
Pkinase pfam00069
Protein kinase domain;
4-241 6.86e-45

Protein kinase domain;


Pssm-ID: 459660 [Multi-domain]  Cd Length: 217  Bit Score: 150.09  E-value: 6.86e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHRKGSNprplEASLVQRFMFQ---LFKGVAHCHSH---- 76
Cdd:pfam00069   1 YEVLRKLGSGSFGTVYKAKHRDTGKIVAIKKIKKEKIKKKKDKNILR----EIKILKKLNHPnivRLYDAFEDKDNlylv 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  77 ------GVLHRDLKPQNLLLDKD-----KGILKiadlGLSRAftvplKAYTHEIVTLWYRAPEVLlGSTHYSTAVDIWSV 145
Cdd:pfam00069  77 leyvegGSLFDLLSEKGAFSEREakfimKQILE----GLESG-----SSLTTFVGTPWYMAPEVL-GGNPYGPKVDVWSL 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 146 GCIFAEMIRRQALFPGDSEFQQLLHIFRllgtpteqqwpgvmalrdwhvypkwEPQDLSRAVPSLSPEGIDLLTQMLKYN 225
Cdd:pfam00069 147 GCILYELLTGKPPFPGINGNEIYELIID-------------------------QPYAFPELPSNLSEEAKDLLKKLLKKD 201
                         250
                  ....*....|....*.
gi 1063706111 226 PAERISAKAALDHPYF 241
Cdd:pfam00069 202 PSKRLTATQALQHPWF 217
STKc_JNK cd07850
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase; STKs catalyze the ...
62-240 1.55e-44

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270840 [Multi-domain]  Cd Length: 337  Bit Score: 152.57  E-value: 1.55e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSR----AFTVplkayTHEIVTLWYRAPEVLLGsTHYS 137
Cdd:cd07850   107 LLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARtagtSFMM-----TPYVVTRYYRAPEVILG-MGYK 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 138 TAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHV--YPKWEPQDLSRAVP-SLSPEG 214
Cdd:cd07850   180 ENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVenRPKYAGYSFEELFPdVLFPPD 259
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1063706111 215 I------------DLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd07850   260 SeehnklkasqarDLLSKMLVIDPEKRISVDDALQHPY 297
STKc_CDKL5 cd07848
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5; STKs ...
3-241 3.99e-44

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270838 [Multi-domain]  Cd Length: 287  Bit Score: 150.15  E-value: 3.99e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR---------------------LEMD-----EEDSHRKG-------- 48
Cdd:cd07848     2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKdseeneevkettlrelkmlrtLKQEnivelKEAFRRRGklylvfey 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 ----------SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFTVPLKA-YTH 117
Cdd:cd07848    82 veknmlelleEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND-VLKLCDFGFARNLSEGSNAnYTE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGT-PTEQQW-----PGVMALRd 191
Cdd:cd07848   161 YVATRWYRSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPlPAEQMKlfysnPRFHGLR- 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 192 whvYPKW-EPQDLSRAVPS-LSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07848   239 ---FPAVnHPQSLERRYLGiLSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287
STKc_MAPKKK cd06606
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase ...
3-241 1.02e-43

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270783 [Multi-domain]  Cd Length: 258  Bit Score: 148.05  E-value: 1.02e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE----------MDEEDSHRKGSNPR-------------------- 52
Cdd:cd06606     1 RWKKGELLGKGSFGSVYLALNLDTGELMAVKEVELSgdseeelealEREIRILSSLKHPNivrylgtertentlnifley 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 --------------PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAF-TVPLKAYTH 117
Cdd:cd06606    81 vpggslasllkkfgKLPEPVVRKYTRQILEGLEYLHSNGIVHRDIKGANILVDSD-GVVKLADFGCAKRLaEIATGEGTK 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIV-TLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLL-HIFRLLGTPteqqwpgvmalrdwhVY 195
Cdd:cd06606   160 SLRgTPYWMAPEVIRG-EGYGRAADIWSLGCTVIEMATGKPPWSELGNPVAALfKIGSSGEPP---------------PI 223
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 196 PKWepqdlsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06606   224 PEH-----------LSEEAKDFLRKCLQRDPKKRPTADELLQHPFL 258
PKc_DYRK cd14210
Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and ...
4-241 1.71e-42

Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase; Protein Kinases (PKs), Dual-specificity tYrosine-phosphorylated and -Regulated Kinase (DYRK) subfamily, catalytic (c) domain. Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. The DYRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein S/T PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. They play important roles in cell proliferation, differentiation, survival, and development. Vertebrates contain multiple DYRKs (DYRK1-4) and mammals contain two types of DYRK1 proteins, DYRK1A and DYRK1B. DYRK1A is involved in neuronal differentiation and is implicated in the pathogenesis of DS (Down syndrome). DYRK1B plays a critical role in muscle differentiation by regulating transcription, cell motility, survival, and cell cycle progression. It is overexpressed in many solid tumors where it acts as a tumor survival factor. DYRK2 promotes apoptosis in response to DNA damage by phosphorylating the tumor suppressor p53, while DYRK3 promotes cell survival by phosphorylating SIRT1 and promoting p53 deacetylation. DYRK4 is a testis-specific kinase that may function during spermiogenesis.


Pssm-ID: 271112 [Multi-domain]  Cd Length: 311  Bit Score: 146.54  E-value: 1.71e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR---------------LEM----DEEDSH-----------R------- 46
Cdd:cd14210    15 YEVLSVLGKGSFGQVVKCLDHKTGQLVAIKIIRnkkrfhqqalvevkiLKHlndnDPDDKHnivrykdsfifRghlcivf 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 -----------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGlSRAFtVPLKA 114
Cdd:cd14210    95 ellsinlyellKSNNFQGLSLSLIRKFAKQILQALQFLHKLNIIHCDLKPENILLkQPSKSSIKVIDFG-SSCF-EGEKV 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YTHeIVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTP---TEQQWP------- 184
Cdd:cd14210   173 YTY-IQSRFYRAPEVILG-LPYDTAIDMWSLGCILAELYTGYPLFPGENEEEQLACIMEVLGVPpksLIDKASrrkkffd 250
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 185 GVMALRDWHVYPK--WEP--QDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14210   251 SNGKPRPTTNSKGkkRRPgsKSLAQVLKCDDPSFLDFLKKCLRWDPSERMTPEEALQHPWI 311
STKc_CAMK cd05117
The catalytic domain of CAMK family Serine/Threonine Kinases; STKs catalyze the transfer of ...
3-239 1.34e-41

The catalytic domain of CAMK family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. CaMKII is a signaling molecule that translates upstream calcium and reactive oxygen species (ROS) signals into downstream responses that play important roles in synaptic function and cardiovascular physiology. CAMKIV is implicated in regulating several transcription factors like CREB, MEF2, and retinoid orphan receptors, as well as in T-cell development and signaling. The CAMK family also consists of other related kinases including the Phosphorylase kinase Gamma subunit (PhKG), the C-terminal kinase domains of Ribosomal S6 kinase (RSK) and Mitogen and stress-activated kinase (MSK), Doublecortin-like kinase (DCKL), and the MAPK-activated protein kinases MK2, MK3, and MK5, among others. The CAMK family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270687 [Multi-domain]  Cd Length: 258  Bit Score: 142.62  E-value: 1.34e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDS-------HRKGSNPRPL------------------ 54
Cdd:cd05117     1 KYELGKVLGRGSFGVVRLAVHKKTGEEYAVKiidKKKLKSEDEEMlrreieiLKRLDHPNIVklyevfeddknlylvmel 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 -------------------EASLVqrfMFQLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGILKIADLGLSRAFTVPLK 113
Cdd:cd05117    81 ctggelfdrivkkgsfserEAAKI---MKQILSAVAYLHSQGIVHRDLKPENILLasKDPDSPIKIIDFGLAKIFEEGEK 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYTheIV-TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSE---FQQLLHifrllGTPT--EQQWPGVm 187
Cdd:cd05117   158 LKT--VCgTPYYVAPEVLKGKG-YGKKCDIWSLGVILYILLCGYPPFYGETEqelFEKILK-----GKYSfdSPEWKNV- 228
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 188 alrdwhvypkwepqdlsravpslSPEGIDLLTQMLKYNPAERISAKAALDHP 239
Cdd:cd05117   229 -----------------------SEEAKDLIKRLLVVDPKKRLTAAEALNHP 257
PKc_DYRK_like cd14133
Catalytic domain of Dual-specificity tYrosine-phosphorylated and -Regulated Kinase-like ...
4-241 2.25e-41

Catalytic domain of Dual-specificity tYrosine-phosphorylated and -Regulated Kinase-like protein kinases; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity DYRKs and YAK1, as well as the S/T kinases (STKs), HIPKs. DYRKs and YAK1 autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. Proteins in this subfamily play important roles in cell proliferation, differentiation, survival, growth, and development. The DYRK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271035 [Multi-domain]  Cd Length: 262  Bit Score: 142.41  E-value: 2.25e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLE-----MDE------------EDSHR------------------ 46
Cdd:cd14133     1 YEVLEVLGKGTFGQVVKCYDLLTGEEVALKiiKNNKDyldqsLDEirllellnkkdkADKYHivrlkdvfyfknhlcivf 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 -----------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGLSRAFTVPLKA 114
Cdd:cd14133    81 ellsqnlyeflKQNKFQYLSLPRIRKIAQQILEALVFLHSLGLIHCDLKPENILLaSYSRCQIKIIDFGSSCFLTQRLYS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YtheIVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPteqqwpgvmalrdwhv 194
Cdd:cd14133   161 Y---IQSRYYRAPEVILG-LPYDEKIDMWSLGCILAELYTGEPLFPGASEVDQLARIIGTIGIP---------------- 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 195 ypkwePQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14133   221 -----PAHMLDQGKADDELFVDFLKKLLEIDPKERPTASQALSHPWL 262
STKc_AMPK-like cd14003
Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases; STKs catalyze ...
3-240 3.58e-41

Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AMPK-like subfamily is composed of AMPK, MARK, BRSK, NUAK, MELK, SNRK, TSSK, and SIK, among others. LKB1 serves as a master upstream kinase that activates AMPK and most AMPK-like kinases. AMPK, also called SNF1 (sucrose non-fermenting1) in yeasts and SnRK1 (SNF1-related kinase1) in plants, is a heterotrimeric enzyme composed of a catalytic alpha subunit and two regulatory subunits, beta and gamma. It is a stress-activated kinase that serves as master regulator of glucose and lipid metabolism by monitoring carbon and energy supplies, via sensing the cell's AMP:ATP ratio. MARKs phosphorylate tau and related microtubule-associated proteins (MAPs), and regulates microtubule-based intracellular transport. They are involved in embryogenesis, epithelial cell polarization, cell signaling, and neuronal differentiation. BRSKs play important roles in establishing neuronal polarity. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. The AMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270905 [Multi-domain]  Cd Length: 252  Bit Score: 141.50  E-value: 3.58e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEE-------DSHRKGSNP--------------------- 51
Cdd:cd14003     1 NYELGKTLGEGSFGKVKLARHKLTGEKVAIKiidKSKLKEEIEekikreiEIMKLLNHPniiklyevietenkiylvmey 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 -------------RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTvpLKAYTHE 118
Cdd:cd14003    81 asggelfdyivnnGRLSEDEARRFFQQLISAVDYCHSNGIVHRDLKLENILLDKN-GNLKIIDFGLSNEFR--GGSLLKT 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IV-TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRllGTPTeqqwpgvmalrdwhvYPK 197
Cdd:cd14003   158 FCgTPAYAAPEVLLGRKYDGPKADVWSLGVILYAMLTGYLPFDDDNDSKLFRKILK--GKYP---------------IPS 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 198 WepqdlsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14003   221 H-----------LSPDARDLIRRMLVVDPSKRITIEEILNHPW 252
PKc cd00180
Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group ...
11-239 4.87e-41

Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. PKs make up a large family of serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and more than 500 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase.


Pssm-ID: 270622 [Multi-domain]  Cd Length: 215  Bit Score: 140.10  E-value: 4.87e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  11 GEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHR-------------------------------------KGS---- 49
Cdd:cd00180     2 GKGSFGKVYKARDKETGKKVAVKVIPKEKLKKLLEEllreieilkklnhpnivklydvfetenflylvmeyceGGSlkdl 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 ---NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTL-WYR 125
Cdd:cd00180    82 lkeNKGPLSEEEALSILRQLLSALEYLHSNGIIHRDLKPENILLDSD-GTVKLADFGLAKDLDSDDSLLKTTGGTTpPYY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 126 APEVLLGSTHYSTAVDIWSVGCIFAEMirrqalfpgdsefqqllhifrllgtpteqqwpgvmalrdwhvypkwepqdlsr 205
Cdd:cd00180   161 APPELLGGRYYGPKVDIWSLGVILYEL----------------------------------------------------- 187
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1063706111 206 avpslsPEGIDLLTQMLKYNPAERISAKAALDHP 239
Cdd:cd00180   188 ------EELKDLIRRMLQYDPKKRPSAKELLEHL 215
STKc_Cdc7 cd14019
Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 7 kinase; STKs catalyze ...
2-241 1.52e-38

Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 7 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Cdc7 kinase (or Hsk1 in fission yeast) is a critical regulator in the initiation of DNA replication. It forms a complex with a Dbf4-related regulatory subunit, a cyclin-like molecule that activates the kinase in late G1 phase, and is also referred to as Dbf4-dependent kinase (DDK). Its main targets are mini-chromosome maintenance (MCM) proteins. Cdc7 kinase may also have additional roles in meiosis, checkpoint responses, the maintenance and repair of chromosome structures, and cancer progression. The Cdc7 kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270921 [Multi-domain]  Cd Length: 252  Bit Score: 134.66  E-value: 1.52e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTT-------GKLVALKK-------TRLEMDEEDSHRKG--SNPRPLEASL------- 58
Cdd:cd14019     1 NKYRIIEKIGEGTFSSVYKAEDKLHdlydrnkGRLVALKHiyptsspSRILNELECLERLGgsNNVSGLITAFrnedqvv 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 ----------------------VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFtvplkAYT 116
Cdd:cd14019    81 avlpyiehddfrdfyrkmsltdIRIYLRNLFKALKHVHSFGIIHRDVKPGNFLYNRETGKGVLVDFGLAQRE-----EDR 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIV-----TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMI-RRQALFPGDSEFQQLLHIFRLLGtpteqqwpgvmalr 190
Cdd:cd14019   156 PEQRapragTRGFRAPEVLFKCPHQTTAIDIWSAGVILLSILsGRFPFFFSSDDIDALAEIATIFG-------------- 221
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 191 dwhvypkwepqdlsravpslSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14019   222 --------------------SDEAYDLLDKLLELDPSKRITAEEALKHPFF 252
PKc_STE cd05122
Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the ...
3-241 5.27e-37

Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPKK kinases (MAPKKKs), or MAPKKK kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. The STE family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270692 [Multi-domain]  Cd Length: 254  Bit Score: 130.79  E-value: 5.27e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDS--------HRKGSNP----------------------- 51
Cdd:cd05122     1 LFEILEKIGKGGFGVVYKARHKKTGQIVAIKKINLESKEKKEsilneiaiLKKCKHPnivkyygsylkkdelwivmefcs 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 ------------RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTvPLKAYTHEI 119
Cdd:cd05122    81 ggslkdllkntnKTLTEQQIAYVCKEVLKGLEYLHSHGIIHRDIKAANILL-TSDGEVKLIDFGLSAQLS-DGKTRNTFV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 120 VTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQalfPGDSEfqqlLHIFRLLG-TPTEqqwpGVMALRDwhvyPKW 198
Cdd:cd05122   159 GTPYWMAPEVIQG-KPYGFKADIWSLGITAIEMAEGK---PPYSE----LPPMKALFlIATN----GPPGLRN----PKK 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 199 epqdlsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd05122   223 -----------WSKEFKDFLKKCLQKDPEKRPTAEQLLKHPFI 254
STKc_CDC2L6 cd07867
Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6; STKs catalyze the ...
44-241 2.79e-36

Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270850 [Multi-domain]  Cd Length: 318  Bit Score: 130.57  E-value: 2.79e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 SHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL---DKDKGILKIADLGLSRAFTVPLKAYTH--- 117
Cdd:cd07867    96 ASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVmgeGPERGRVKIADMGFARLFNSPLKPLADldp 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSE---------FQQLLHIFRLLGTPTEQQWPGVMA 188
Cdd:cd07867   176 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEdiktsnpfhHDQLDRIFSVMGFPADKDWEDIRK 255
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 189 LRDwhvYPKWEpQDLSRAVPS------------LSPEG--IDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07867   256 MPE---YPTLQ-KDFRRTTYAnsslikymekhkVKPDSkvFLLLQKLLTMDPTKRITSEQALQDPYF 318
STKc_PknB_like cd14014
Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs ...
3-236 1.30e-35

Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270916 [Multi-domain]  Cd Length: 260  Bit Score: 127.32  E-value: 1.30e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHRK--------------------------GSNP----- 51
Cdd:cd14014     1 RYRLVRLLGRGGMGEVYRARDTLLGRPVAIKVLRPELAEDEEFRErflrearalarlshpnivrvydvgedDGRPyivme 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 --------------RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTH 117
Cdd:cd14014    81 yveggsladllrerGPLPPREALRILAQIADALAAAHRAGIVHRDIKPANILLTED-GRVKLTDFGIARALGDSGLTQTG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIV-TLWYRAPEVLLGStHYSTAVDIWSVGCIFAEMIRRQALFPGDSEfqqllhifrllgtpteqqwpgvMALRDWHVYP 196
Cdd:cd14014   160 SVLgTPAYMAPEQARGG-PVDPRSDIYSLGVVLYELLTGRPPFDGDSP----------------------AAVLAKHLQE 216
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1063706111 197 kwEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAAL 236
Cdd:cd14014   217 --APPPPSPLNPDVPPALDAIILRALAKDPEERPQSAAEL 254
STKc_Bck1_like cd06629
Catalytic domain of the Serine/Threonine Kinases, fungal Bck1-like Mitogen-Activated Protein ...
3-240 1.26e-34

Catalytic domain of the Serine/Threonine Kinases, fungal Bck1-like Mitogen-Activated Protein Kinase Kinase Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The Bck1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270799 [Multi-domain]  Cd Length: 270  Bit Score: 124.80  E-value: 1.26e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRL---EMDEEDSHRK-------------------------------- 47
Cdd:cd06629     2 KWVKGELIGKGTYGRVYLAMNATTGEMLAVKQVELpktSSDRADSRQKtvvdalkseidtlkdldhpnivqylgfeeted 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 -----------GS------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTv 110
Cdd:cd06629    82 yfsifleyvpgGSigsclrKYGKFEEDLVRFFTRQILDGLAYLHSKGILHRDLKADNILVDLE-GICKISDFGISKKSD- 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 plKAY-THEIVTL----WYRAPEVL-LGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFrllgtpTEQQWP 184
Cdd:cd06629   160 --DIYgNNGATSMqgsvFWMAPEVIhSQGQGYSAKVDIWSLGCVVLEMLAGRRPWSDDEAIAAMFKLG------NKRSAP 231
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 185 GVmalrdwhvypkwePQDLsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd06629   232 PV-------------PEDV-----NLSPEALDFLNACFAIDPRDRPTAAELLSHPF 269
STKc_MEKK4 cd06626
Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP) ...
3-240 1.35e-34

Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK4 is a MAPK kinase kinase that phosphorylates and activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270796 [Multi-domain]  Cd Length: 265  Bit Score: 124.72  E-value: 1.35e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRL-------------EMD--EEDSHRK-------------------- 47
Cdd:cd06626     1 RWQRGNKIGEGTFGKVYTAVNLDTGELMAMKEIRFqdndpktikeiadEMKvlEGLDHPNlvryygvevhreevyifmey 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 ---GS------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd06626    81 cqeGTleellrHGRILDEAVIRVYTLQLLEGLAYLHENGIVHRDIKPANIFLD-SNGLIKLGDFGSAVKLKNNTTTMAPG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IV-----TLWYRAPEVLLGS--THYSTAVDIWSVGCIFAEMI--RRqalfPG---DSEFQQLLHIfRLLGTPTeqqwpgv 186
Cdd:cd06626   160 EVnslvgTPAYMAPEVITGNkgEGHGRAADIWSLGCVVLEMAtgKR----PWselDNEWAIMYHV-GMGHKPP------- 227
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 187 malrdwhvypkwEPQDLsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd06626   228 ------------IPDSL-----QLSPEGKDFLSRCLESDPKKRPTASELLDHPF 264
PKc_YAK1 cd14212
Catalytic domain of the Dual-specificity protein kinase, YAK1; Dual-specificity PKs catalyze ...
4-241 1.93e-34

Catalytic domain of the Dual-specificity protein kinase, YAK1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of proteins with similarity to Saccharomyces cerevisiae YAK1 (or Yak1p), a dual-specificity kinase that autophosphorylates at tyrosine residues and phosphorylates substrates on S/T residues. YAK1 phosphorylates and activates the transcription factors Hsf1 and Msn2, which play important roles in cellular homeostasis during stress conditions including heat shock, oxidative stress, and nutrient deficiency. It also phosphorylates the protein POP2, a component of a complex that regulates transcription, under glucose-deprived conditions. It functions as a part of a glucose-sensing system that is involved in controlling growth in yeast. The YAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271114 [Multi-domain]  Cd Length: 330  Bit Score: 125.83  E-value: 1.93e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTR-------------LEM-----DEEDSHR----------------- 46
Cdd:cd14212     1 YLVLDLLGQGTFGQVVKCQDLKTNKLVAVKvlKNKpayfrqamleiaiLTLlntkyDPEDKHHivrlldhfmhhghlciv 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ------------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGlSRAF---TV 110
Cdd:cd14212    81 fellgvnlyellKQNQFRGLSLQLIRKFLQQLLDALSVLKDARIIHCDLKPENILLvNLDSPEIKLIDFG-SACFenyTL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 plkaYTHeIVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTP------------ 178
Cdd:cd14212   160 ----YTY-IQSRFYRSPEVLLG-LPYSTAIDMWSLGCIAAELFLGLPLFPGNSEYNQLSRIIEMLGMPpdwmlekgkntn 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 179 ----TEQQWPGVMALR-------DWHVYPKWEP----------QDLSRAVP---SLSPEG----------IDLLTQMLKY 224
Cdd:cd14212   234 kffkKVAKSGGRSTYRlktpeefEAENNCKLEPgkryfkyktlEDIIMNYPmkkSKKEQIdkemetrlafIDFLKGLLEY 313
                         330
                  ....*....|....*..
gi 1063706111 225 NPAERISAKAALDHPYF 241
Cdd:cd14212   314 DPKKRWTPDQALNHPFI 330
STKc_CDK8 cd07868
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8; STKs ...
44-241 3.93e-34

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270851 [Multi-domain]  Cd Length: 333  Bit Score: 125.17  E-value: 3.93e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 SHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL---DKDKGILKIADLGLSRAFTVPLKAYTH--- 117
Cdd:cd07868   111 ASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVmgeGPERGRVKIADMGFARLFNSPLKPLADldp 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSE---------FQQLLHIFRLLGTPTEQQWPGVMA 188
Cdd:cd07868   191 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEdiktsnpyhHDQLDRIFNVMGFPADKDWEDIKK 270
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 189 LRDWHVYPKwepqDLSRAVPS------------LSPE--GIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd07868   271 MPEHSTLMK----DFRRNTYTncslikymekhkVKPDskAFHLLQKLLTMDPIKRITSEQAMQDPYF 333
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
3-237 5.26e-34

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 127.44  E-value: 5.26e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEEDSHR---------------------------------- 46
Cdd:COG0515     8 RYRILRLLGRGGMGVVYLARDLRLGRPVALKvlRPELAADPEARERfrrearalarlnhpnivrvydvgeedgrpylvme 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 -----------KGSNPRPLEASLvqRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAY 115
Cdd:COG0515    88 yvegesladllRRRGPLPPAEAL--RILAQLAEALAAAHAAGIVHRDIKPANILLTPD-GRVKLIDFGIARALGGATLTQ 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIV-TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRllgtpteqqwpgvmalrdwhv 194
Cdd:COG0515   165 TGTVVgTPGYMAPEQARGEP-VDPRSDVYSLGVTLYELLTGRPPFDGDSPAELLRAHLR--------------------- 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 195 ypkWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERI-SAKAALD 237
Cdd:COG0515   223 ---EPPPPPSELRPDLPPALDAIVLRALAKDPEERYqSAAELAA 263
STKc_JNK3 cd07874
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3; STKs catalyze the ...
54-242 1.95e-33

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in JNK3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143379 [Multi-domain]  Cd Length: 355  Bit Score: 124.05  E-value: 1.95e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLkAYTHEIVTLWYRAPEVLLGs 133
Cdd:cd07874   116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG- 192
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 134 THYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVM-ALRDwhvYPKWEPQDLSRAVPSLSP 212
Cdd:cd07874   193 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQpTVRN---YVENRPKYAGLTFPKLFP 269
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 213 EGI----------------DLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:cd07874   270 DSLfpadsehnklkasqarDLLSKMLVIDPAKRISVDEALQHPYIN 315
STKc_Nek cd08215
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase; ...
3-241 5.31e-33

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270855 [Multi-domain]  Cd Length: 258  Bit Score: 120.26  E-value: 5.31e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRL-EMDEED--------------SH---------------------- 45
Cdd:cd08215     1 KYEKIRVIGKGSFGSAYLVRRKSDGKLYVLKEIDLsNMSEKEreealnevkllsklKHpnivkyyesfeengklcivmey 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 -----------RKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAF--TVPL 112
Cdd:cd08215    81 adggdlaqkikKQKKKGQPFPEEQILDWFVQICLALKYLHSRKILHRDLKTQNIFLTKD-GVVKLGDFGISKVLesTTDL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 113 kAYTheIV-TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSeFQQLLhifrllgtpteqqwpgVMALRD 191
Cdd:cd08215   160 -AKT--VVgTPYYLSPELCENKP-YNYKSDIWALGCVLYELCTLKHPFEANN-LPALV----------------YKIVKG 218
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 192 whvypkwEPQDLSravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd08215   219 -------QYPPIP---SQYSSELRDLVNSMLQKDPEKRPSANEILSSPFI 258
STKc_JNK2 cd07876
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2; STKs catalyze the ...
62-240 1.08e-32

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK2 is expressed in every cell and tissue type. It is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143381 [Multi-domain]  Cd Length: 359  Bit Score: 122.06  E-value: 1.08e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLkAYTHEIVTLWYRAPEVLLGsTHYSTAVD 141
Cdd:cd07876   128 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-CTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILG-MGYKENVD 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 142 IWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQ-----------------QWPGVMALrdwHVYPKWE-PQDL 203
Cdd:cd07876   205 IWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEfmnrlqptvrnyvenrpQYPGISFE---ELFPDWIfPSES 281
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1063706111 204 SRAVPSLSpEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd07876   282 ERDKLKTS-QARDLLSKMLVIDPDKRISVDEALRHPY 317
STKc_AGC cd05123
Catalytic domain of AGC family Serine/Threonine Kinases; STKs catalyze the transfer of the ...
10-241 4.66e-32

Catalytic domain of AGC family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. The AGC family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase.


Pssm-ID: 270693 [Multi-domain]  Cd Length: 250  Bit Score: 117.62  E-value: 4.66e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDSHRKgsNPRPLEASLVQRFM------FQ--------------- 65
Cdd:cd05123     1 LGKGSFGKVLLVRKKDTGKLYAMKvlrKKEIIKRKEVEHTL--NERNILERVNHPFIvklhyaFQteeklylvldyvpgg 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 -LFK----------------------GVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFtVPLKAYTHEIV-T 121
Cdd:cd05123    79 eLFShlskegrfpeerarfyaaeivlALEYLHSLGIIYRDLKPENILLDSD-GHIKLTDFGLAKEL-SSDGDRTYTFCgT 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 122 LWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQqllhIFRLLgtpteqqwpgvmaLRDWHVYPkwepq 201
Cdd:cd05123   157 PEYLAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAENRKE----IYEKI-------------LKSPLKFP----- 213
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 202 dlsravPSLSPEGIDLLTQMLKYNPAERISAKAALD---HPYF 241
Cdd:cd05123   214 ------EYVSPEAKSLISGLLQKDPTKRLGSGGAEEikaHPFF 250
STKc_Rad53_Cds1 cd14098
Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the ...
3-240 1.01e-31

Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Rad53 and Cds1 are the checkpoint kinase 2 (Chk2) homologs found in budding and fission yeast, respectively. They play a central role in the cell's response to DNA lesions to prevent genome rearrangements and maintain genome integrity. They are phosphorylated in response to DNA damage and incomplete replication, and are essential for checkpoint control. They help promote DNA repair by stalling the cell cycle prior to mitosis in the presence of DNA damage. The Rad53/Cds1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271000 [Multi-domain]  Cd Length: 265  Bit Score: 117.19  E-value: 1.01e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK----------KTRLEM--DEEDSHRKGSNPR----------PLEASLVQ 60
Cdd:cd14098     1 KYQIIDRLGSGTFAEVKKAVEVETGKMRAIKqivkrkvagnDKNLQLfqREINILKSLEHPGivrlidwyedDQHIYLVM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFM------------------------FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG-ILKIADLGLSRAFTVP--LK 113
Cdd:cd14098    81 EYVeggdlmdfimawgaipeqhareltKQILEAMAYTHSMGITHRDLKPENILITQDDPvIVKISDFGLAKVIHTGtfLV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYTHeivTLWYRAPEVLLGSTH-----YSTAVDIWSVGCIFAEMIRRQALFPGDSEFQqllhIFRLLGTPTEQQWPgvma 188
Cdd:cd14098   161 TFCG---TMAYLAPEILMSKEQnlqggYSNLVDMWSVGCLVYVMLTGALPFDGSSQLP----VEKRIRKGRYTQPP---- 229
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 189 LRDWHVypkwepqdlsravpslSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14098   230 LVDFNI----------------SEEAIDFILRLLDVDPEKRMTAAQALDHPW 265
STKc_Aurora cd14007
Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of ...
4-239 2.15e-31

Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Yeast contains only one Aurora kinase while most higher eukaryotes have two. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2. Aurora-B is most active at the transition during metaphase to the end of mitosis. It is critical for accurate chromosomal segregation, cytokinesis, protein localization to the centrosome and kinetochore, correct microtubule-kinetochore attachments, and regulation of the mitotic checkpoint. Aurora-C is mainly expressed in meiotically dividing cells; it was originally discovered in mice as a testis-specific STK called Aie1. Both Aurora-B and -C are chromosomal passenger proteins that can form complexes with INCENP and survivin, and they may have redundant cellular functions. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270909 [Multi-domain]  Cd Length: 253  Bit Score: 116.03  E-value: 2.15e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRL-EMDEEDS-------HRKGSNP--------------------- 51
Cdd:cd14007     2 FEIGKPLGKGKFGNVYLAREKKSGFIVALKvisKSQLqKSGLEHQlrreieiQSHLRHPnilrlygyfedkkriyliley 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 -------------RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSrAFTVPLKAYThe 118
Cdd:cd14007    82 apngelykelkkqKRFDEKEAAKYIYQLALALDYLHSKNIIHRDIKPENILLG-SNGELKLADFGWS-VHAPSNRRKT-- 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IV-TLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtptEQQWPgvmalrdwhvypk 197
Cdd:cd14007   158 FCgTLDYLPPEMVEG-KEYDYKVDIWSLGVLCYELLVGKPPFESKSHQETYKRIQNV-----DIKFP------------- 218
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 198 wepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHP 239
Cdd:cd14007   219 ----------SSVSPEAKDLISKLLQKDPSKRLSLEQVLNHP 250
STKc_STK36 cd14002
Catalytic domain of Serine/Threonine Kinase 36; STKs catalyze the transfer of the ...
2-240 2.43e-31

Catalytic domain of Serine/Threonine Kinase 36; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK36, also called Fused (or Fu) kinase, is involved in the Hedgehog signaling pathway. It is activated by the Smoothened (SMO) signal transducer, resulting in the stabilization of GLI transcription factors and the phosphorylation of SUFU to facilitate the nuclear accumulation of GLI. In Drosophila, Fused kinase is maternally required for proper segmentation during embryonic development and for the development of legs and wings during the larval stage. In mice, STK36 is not necessary for embryonic development, although mice deficient in STK36 display growth retardation postnatally. The STK36 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270904 [Multi-domain]  Cd Length: 253  Bit Score: 115.81  E-value: 2.43e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK----KTRLEMD------EEDSHRKGSNP-------------------- 51
Cdd:cd14002     1 ENYHVLELIGEGSFGKVYKGRRKYTGQVVALKfipkRGKSEKElrnlrqEIEILRKLNHPniiemldsfetkkefvvvte 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 -------------RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd14002    81 yaqgelfqileddGTLPEEEVRSIAKQLVSALHYLHSNRIIHRDMKPQNILIGKG-GVVKLCDFGFARAMSCNTLVLTSI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVTLWYRAPEvLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFqQLLHifrllgtpteqqwpgvMALRDWHVYPKw 198
Cdd:cd14002   160 KGTPLYMAPE-LVQEQPYDHTADLWSLGCILYELFVGQPPFYTNSIY-QLVQ----------------MIVKDPVKWPS- 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 199 epqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14002   221 ----------NMSPEFKSFLQGLLNKDPSKRLSWPDLLEHPF 252
PKc_CLK cd14134
Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases; Dual-specificity ...
2-241 5.65e-31

Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. CLKs are involved in the phosphorylation and regulation of serine/arginine-rich (SR) proteins, which play a crucial role in pre-mRNA splicing by directing splice site selection. SR proteins are phosphorylated first by SR protein kinases (SRPKs) at the N-terminus, which leads to its assembly into nuclear speckles where splicing factors are stored. CLKs phosphorylate the C-terminal part of SR proteins, causing the nuclear speckles to dissolve and splicing factors to be recruited at sites of active transcription. Based on a conserved "EHLAMMERILG" signature motif which may be crucial for substrate specificity, CLKs are also referred to as LAMMER kinases. CLKs autophosphorylate at tyrosine residues and phosphorylate their substrates exclusively on S/T residues. In Drosophila, the CLK homolog DOA (Darkener of apricot) is essential for embryogenesis and its mutation leads to defects in sexual differentiation, eye formation, and neuronal development. In fission yeast, the CLK homolog Lkh1 is a negative regulator of filamentous growth and asexual flocculation, and is also involved in oxidative stress response. Vertebrates contain mutliple CLK proteins and mammals have four (CLK1-4). The CLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271036 [Multi-domain]  Cd Length: 332  Bit Score: 116.90  E-value: 5.65e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR----------LEMD----------EEDSH---------------- 45
Cdd:cd14134    12 NRYKILRLLGEGTFGKVLECWDRKRKRYVAVKIIRnvekyreaakIEIDvletlaekdpNGKSHcvqlrdwfdyrghmci 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 ------------RKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLD-------------------KDK 94
Cdd:cd14134    92 vfellgpslydfLKKNNYGPFPLEHVQHIAKQLLEAVAFLHDLKLTHTDLKPENILLVdsdyvkvynpkkkrqirvpKST 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  95 GIlKIADLGLSraftvplkAYTHE-----IVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLL 169
Cdd:cd14134   172 DI-KLIDFGSA--------TFDDEyhssiVSTRHYRAPEVILG-LGWSYPCDVWSIGCILVELYTGELLFQTHDNLEHLA 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 170 HIFRLLGTP-------------------TEQQWPGVMALRDwhvYPKWEPQDLSRAVPSLSPEG---IDLLTQMLKYNPA 227
Cdd:cd14134   242 MMERILGPLpkrmirrakkgakyfyfyhGRLDWPEGSSSGR---SIKRVCKPLKRLMLLVDPEHrllFDLIRKMLEYDPS 318
                         330
                  ....*....|....
gi 1063706111 228 ERISAKAALDHPYF 241
Cdd:cd14134   319 KRITAKEALKHPFF 332
PKc_DYRK4 cd14225
Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and ...
3-241 6.08e-31

Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. DYRK4 is a testis-specific kinase with restricted expression to postmeiotic spermatids. It may function during spermiogenesis, however, it is not required for male fertility. DYRK4 has also been detected in a human teratocarcinoma cell line induced to produce postmitotic neurons. It may have a role in neuronal differentiation. DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. They play important roles in cell proliferation, differentiation, survival, and development. The DYRK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271127 [Multi-domain]  Cd Length: 341  Bit Score: 116.73  E-value: 6.08e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK----KTRL---------------EMDEEDSHR----------------- 46
Cdd:cd14225    44 RYEILEVIGKGSFGQVVKALDHKTNEHVAIKiirnKKRFhhqalvevkildalrRKDRDNSHNvihmkeyfyfrnhlcit 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ------------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGLSraftvplk 113
Cdd:cd14225   124 fellgmnlyeliKKNNFQGFSLSLIRRFAISLLQCLRLLYRERIIHCDLKPENILLrQRGQSSIKVIDFGSS-------- 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYTHEIV-----TLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPT--------- 179
Cdd:cd14225   196 CYEHQRVytyiqSRFYRSPEVILG-LPYSMAIDMWSLGCILAELYTGYPLFPGENEVEQLACIMEVLGLPPpelienaqr 274
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 180 -------------------EQQWPGvmalrdwhvypkwePQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14225   275 rrlffdskgnprcitnskgKKRRPN--------------SKDLASALKTSDPLFLDFIRRCLEWDPSKRMTPDEALQHEW 340

                  .
gi 1063706111 241 F 241
Cdd:cd14225   341 I 341
STKc_JNK1 cd07875
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1; STKs catalyze the ...
54-242 6.43e-31

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK1 is expressed in every cell and tissue type. It specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in JNK1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Initially, it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNKs are mitogen-activated protein kinases that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143380 [Multi-domain]  Cd Length: 364  Bit Score: 117.45  E-value: 6.43e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLkAYTHEIVTLWYRAPEVLLGs 133
Cdd:cd07875   123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG- 199
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 134 THYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHV--YPKWEPQDLSRAVPSL- 210
Cdd:cd07875   200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVenRPKYAGYSFEKLFPDVl 279
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 211 -----------SPEGIDLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:cd07875   280 fpadsehnklkASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
STKc_SRPK cd14136
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase; STKs catalyze ...
47-241 1.30e-30

Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. They play important roles in mediating pre-mRNA processing and mRNA maturation, as well as other cellular functions such as chromatin reorganization, cell cycle and p53 regulation, and metabolic signaling. Vertebrates contain three distinct SRPKs, called SRPK1-3. The SRPK homolog in budding yeast, Sky1p, recognizes and phosphorylates its substrate Npl3p, which lacks a classic RS domain but contains a single RS dipeptide at the C-terminus of its RGG domain. Npl3p is a shuttling heterogeneous nuclear ribonucleoprotein (hnRNP) that exports a distinct class of mRNA from the nucleus to the cytoplasm. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271038 [Multi-domain]  Cd Length: 320  Bit Score: 115.37  E-value: 1.30e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 KGSNPRPLEASLVQRFMFQLFKGVAHCHSH-GVLHRDLKPQNLLLDKDKGILKIADLGlSRAFTVplKAYTHEIVTLWYR 125
Cdd:cd14136   109 KRYNYRGIPLPLVKKIARQVLQGLDYLHTKcGIIHTDIKPENVLLCISKIEVKIADLG-NACWTD--KHFTEDIQTRQYR 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 126 APEVLLGStHYSTAVDIWSVGCIFAEMIRRQALF---PGDS---EFQQLLHIFRLLGT-PTE------------------ 180
Cdd:cd14136   186 SPEVILGA-GYGTPADIWSTACMAFELATGDYLFdphSGEDysrDEDHLALIIELLGRiPRSiilsgkysreffnrkgel 264
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 181 ------QQWPGVMALRDWHVYPKWEPQDLSravpslspegiDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14136   265 rhisklKPWPLEDVLVEKYKWSKEEAKEFA-----------SFLLPMLEYDPEKRATAAQCLQHPWL 320
STKc_PLK cd14099
Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the ...
2-241 3.72e-30

Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. PLKs derive their names from homology to polo, a kinase first identified in Drosophila. There are five mammalian PLKs (PLK1-5) from distinct genes. There is good evidence that PLK1 may function as an oncogene while PLK2-5 have tumor suppressive properties. PLK1 functions as a positive regulator of mitosis, meiosis, and cytokinesis. PLK2 functions in G1 progression, S-phase arrest, and centriole duplication. PLK3 regulates angiogenesis and responses to DNA damage. PLK4 is required for late mitotic progression, cell survival, and embryonic development. PLK5 was first identified as a pseudogene containing a stop codon within the kinase domain, however, both murine and human genes encode expressed proteins. PLK5 functions in cell cycle arrest.


Pssm-ID: 271001 [Multi-domain]  Cd Length: 258  Bit Score: 113.03  E-value: 3.72e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK----------KTRLEMDEE-DSHRKGSNPRPLE--------------- 55
Cdd:cd14099     1 KRYRRGKFLGKGGFAKCYEVTDMSTGKVYAGKvvpkssltkpKQREKLKSEiKIHRSLKHPNIVKfhdcfedeenvyill 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  56 -----ASL--------------VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTvplkaYT 116
Cdd:cd14099    81 elcsnGSLmellkrrkaltepeVRYFMRQILSGVKYLHSNRIIHRDLKLGNLFLDEN-MNVKIGDFGLAARLE-----YD 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HE-IVTLW----YRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtptEQQWPgvmalrd 191
Cdd:cd14099   155 GErKKTLCgtpnYIAPEVLEKKKGHSFEVDIWSLGVILYTLLVGKPPFETSDVKETYKRIKKN-----EYSFP------- 222
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 192 whvypkwepqdlsrAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14099   223 --------------SHLSISDEAKDLIRSMLQPDPTKRPSLDEILSHPFF 258
PKc_DYRK1 cd14226
Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and ...
1-241 6.23e-30

Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. Mammals contain two types of DYRK1 proteins, DYRK1A and DYRK1B. DYRK1A was previously called minibrain kinase homolog (MNBH) or dual-specificity YAK1-related kinase. It phosphorylates various substrates and is involved in many cellular events. It phosphorylates and inhibits the transcription factors, nuclear factor of activated T cells (NFAT) and forkhead in rhabdomyosarcoma (FKHR). It regulates neuronal differentiation by targetting CREB (cAMP response element-binding protein). It also targets many endocytic proteins including dynamin and amphiphysin and may play a role in the endocytic pathway. The gene encoding DYRK1A is located in the DSCR (Down syndrome critical region) of human chromosome 21 and DYRK1A has been implicated in the pathogenesis of DS. DYRK1B, also called minibrain-related kinase (MIRK), is highly expressed in muscle and plays a critical role in muscle differentiation by regulating transcription, cell motility, survival, and cell cycle progression. It is overexpressed in many solid tumors where it acts as a tumor survival factor. DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. The DYRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271128 [Multi-domain]  Cd Length: 339  Bit Score: 114.34  E-value: 6.23e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR---------------LEM----DEEDS-----------HR---- 46
Cdd:cd14226    12 MDRYEIDSLIGKGSFGQVVKAYDHVEQEWVAIKIIKnkkaflnqaqievrlLELmnkhDTENKyyivrlkrhfmFRnhlc 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 --------------KGSNPRPLEASLVQRFMFQLFKGVAHCHSH--GVLHRDLKPQNLLL-DKDKGILKIADLGLSraFT 109
Cdd:cd14226    92 lvfellsynlydllRNTNFRGVSLNLTRKFAQQLCTALLFLSTPelSIIHCDLKPENILLcNPKRSAIKIIDFGSS--CQ 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 110 VPLKAYTHeIVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTE---QQWPGV 186
Cdd:cd14226   170 LGQRIYQY-IQSRFYRSPEVLLG-LPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGMPPVhmlDQAPKA 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 187 MALRDWHV----YPKWEPQDLSRAVPS-------LSPEG---------------------IDLLTQMLKYNPAERISAKA 234
Cdd:cd14226   248 RKFFEKLPdgtyYLKKTKDGKKYKPPGsrklheiLGVETggpggrragepghtvedylkfKDLILRMLDYDPKTRITPAE 327

                  ....*..
gi 1063706111 235 ALDHPYF 241
Cdd:cd14226   328 ALQHSFF 334
STKc_Cdc7_like cd06627
Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs ...
8-241 8.59e-29

Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270797 [Multi-domain]  Cd Length: 254  Bit Score: 109.24  E-value: 8.59e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDS---------------HR-----------------------KGS 49
Cdd:cd06627     6 DLIGRGAFGSVYKGLNLNTGEFVAIKQISLEKIPKSDlksvmgeidllkklnHPnivkyigsvktkdslyiileyveNGS 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 ------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSrAFTVPLKAYTHEIV-TL 122
Cdd:cd06627    86 lasiikKFGKFPESLVAVYIYQVLEGLAYLHEQGVIHRDIKGANILTTKD-GLVKLADFGVA-TKLNEVEKDENSVVgTP 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 123 WYRAPEVLLGSTHySTAVDIWSVGCIFAEMIRRQalfPGDSEFQQLLHIFRLLgtpteqqwpgvmalrdwhvypkwepQD 202
Cdd:cd06627   164 YWMAPEVIEMSGV-TTASDIWSVGCTVIELLTGN---PPYYDLQPMAALFRIV-------------------------QD 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1063706111 203 LSRAVPS-LSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06627   215 DHPPLPEnISPELRDFLLQCFQKDPTLRPSAKELLKHPWL 254
STKc_Pat1_like cd13993
Catalytic domain of Fungal Pat1-like Serine/Threonine kinases; STKs catalyze the transfer of ...
3-237 1.02e-28

Catalytic domain of Fungal Pat1-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Pat1 (also called Ran1), Saccharomyces cerevisiae VHS1 and KSP1, and similar fungal STKs. Pat1 blocks Mei2, an RNA-binding protein which is indispensable in the initiation of meiosis. Pat1 is inactivated and Mei2 activated, which initiates meiosis, under nutrient-deprived conditions through a signaling cascade involving Ste11. Meiosis induced by Pat1 inactivation may show different characteristics than normal meiosis including aberrant positioning of centromeres. VHS1 was identified in a screen for suppressors of cell cycle arrest at the G1/S transition, while KSP1 may be involved in regulating PRP20, which is required for mRNA export and maintenance of nuclear structure. The Pat1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270895 [Multi-domain]  Cd Length: 267  Bit Score: 109.36  E-value: 1.02e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---------------KTRLEMDEEDSHRK-GSNPR-------------- 52
Cdd:cd13993     1 RYQLISPIGEGAYGVVYLAVDLRTGRKYAIKclyksgpnskdgndfQKLPQLREIDLHRRvSRHPNiitlhdvfetevai 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 ----------------------PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLsrAFTV 110
Cdd:cd13993    81 yivleycpngdlfeaitenriyVGKTELIKNVFLQLIDAVKHCHSLGIYHRDIKPENILLSQDEGTVKLCDFGL--ATTE 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 PLKaYTHEIVTLWYRAPEVL-----LGSTHYSTAVDIWSVGCIFAEMIRRQALFPgdsefqqllhifrllgTPTEQqwpg 185
Cdd:cd13993   159 KIS-MDFGVGSEFYMAPECFdevgrSLKGYPCAAGDIWSLGIILLNLTFGRNPWK----------------IASES---- 217
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 186 vmalRDWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALD 237
Cdd:cd13993   218 ----DPIFYDYYLNSPNLFDVILPMSDDFYNLLRQIFTVNPNNRILLPELQL 265
STKc_PAK cd06614
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase; STKs catalyze the ...
3-241 2.06e-28

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270789 [Multi-domain]  Cd Length: 255  Bit Score: 108.07  E-value: 2.06e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE----------------------DSHRKGS----------- 49
Cdd:cd06614     1 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKeliineilimkeckhpnivdyyDSYLVGDelwvvmeymdg 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 ---------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPlKAYTHEIV 120
Cdd:cd06614    81 gsltdiitqNPVRMNESQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKD-GSVKLADFGFAAQLTKE-KSKRNSVV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 -TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRrqalfpgdsefqqllhifrllGTPTEQQWPGVMALrdWHVYPKWE 199
Cdd:cd06614   159 gTPYWMAPEVIKRKD-YGPKVDIWSLGIMCIEMAE---------------------GEPPYLEEPPLRAL--FLITTKGI 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 200 PQdlSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06614   215 PP--LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFL 254
STKc_MAP3K-like cd13999
Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine ...
10-229 2.60e-28

Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed mainly of MAP3Ks and similar proteins, including TGF-beta Activated Kinase-1 (TAK1, also called MAP3K7), MAP3K12, MAP3K13, Mixed lineage kinase (MLK), MLK-Like mitogen-activated protein Triple Kinase (MLTK), and Raf (Rapidly Accelerated Fibrosarcoma) kinases. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Also included in this subfamily is the pseudokinase Kinase Suppressor of Ras (KSR), which is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway.


Pssm-ID: 270901 [Multi-domain]  Cd Length: 245  Bit Score: 107.62  E-value: 2.60e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAmeKTTGKLVALKKTRLEMDEED---------------SHR-----------------------KGS-- 49
Cdd:cd13999     1 IGSGSFGEVYKG--KWRGTDVAIKKLKVEDDNDEllkefrrevsilsklRHPnivqfigaclsppplcivteympGGSly 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 -----NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWY 124
Cdd:cd13999    79 dllhkKKIPLSWSLRLKIALDIARGMNYLHSPPIIHRDLKSLNILLDEN-FTVKIADFGLSRIKNSTTEKMTGVVGTPRW 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 125 RAPEVLLGStHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQllhifrllgtpteqqwpgvmalrDWHVYPKWEPQDLS 204
Cdd:cd13999   158 MAPEVLRGE-PYTEKADVYSFGIVLWELLTGEVPFKELSPIQI-----------------------AAAVVQKGLRPPIP 213
                         250       260
                  ....*....|....*....|....*
gi 1063706111 205 ravPSLSPEGIDLLTQMLKYNPAER 229
Cdd:cd13999   214 ---PDCPPELSKLIKRCWNEDPEKR 235
STKc_ATG1_ULK_like cd14009
Catalytic domain of the Serine/Threonine kinases, Autophagy-related protein 1 and Unc-51-like ...
10-240 3.48e-28

Catalytic domain of the Serine/Threonine kinases, Autophagy-related protein 1 and Unc-51-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes yeast ATG1 and metazoan homologs including vertebrate ULK1-3. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. It is involved in nutrient sensing and signaling, the assembly of autophagy factors and the execution of autophagy. In metazoans, ATG1 homologs display additional functions. Unc-51 and ULKs have been implicated in neuronal and axonal development. The ATG1/ULK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270911 [Multi-domain]  Cd Length: 251  Bit Score: 107.69  E-value: 3.48e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALK--------KTRLE-----------------------MDEEDS-------------- 44
Cdd:cd14009     1 IGRGSFATVWKGRHKQTGEVVAIKeisrkklnKKLQEnleseiailksikhpnivrlydvQKTEDFiylvleycaggdls 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 ---HRKGsnprPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGILKIADLGLSR-------AFTV-- 110
Cdd:cd14009    81 qyiRKRG----RLPEAVARHFMQQLASGLKFLRSKNIIHRDLKPQNLLLstSGDDPVLKIADFGFARslqpasmAETLcg 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 -PLkaytheivtlwYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSeFQQLLHIFRllgtpteqqwpgvmal 189
Cdd:cd14009   157 sPL-----------YMAPEILQ-FQKYDAKADLWSVGAILFEMLVGKPPFRGSN-HVQLLRNIE---------------- 207
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 190 rdwhvypKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14009   208 -------RSDAVIPFPIAAQLSPDCKDLLRRLLRRDPAERISFEEFFAHPF 251
STKc_MST1_2 cd06612
Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2; ...
2-241 7.38e-28

Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 and MEKK1 by acting as a MAPK kinase kinase kinase. Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132943 [Multi-domain]  Cd Length: 256  Bit Score: 106.97  E-value: 7.38e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED---------------------SHRKGSN---------- 50
Cdd:cd06612     3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEiikeisilkqcdspyivkyygSYFKNTDlwivmeycga 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 ----------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIV 120
Cdd:cd06612    83 gsvsdimkitNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEE-GQAKLADFGVSGQLTDTMAKRNTVIG 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSTHYSTAvDIWSVGCIFAEMIRrqaLFPGDSEFQQLLHIFrllgtpteqqwpgvmalrdwhVYPKWEP 200
Cdd:cd06612   162 TPFWMAPEVIQEIGYNNKA-DIWSLGITAIEMAE---GKPPYSDIHPMRAIF---------------------MIPNKPP 216
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 201 QDLSraVPSL-SPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06612   217 PTLS--DPEKwSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256
STKc_MAST_like cd05579
Catalytic domain of Microtubule-associated serine/threonine (MAST) kinase-like proteins; STKs ...
13-245 8.37e-28

Catalytic domain of Microtubule-associated serine/threonine (MAST) kinase-like proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAST kinases, MAST-like (MASTL) kinases (also called greatwall kinase or Gwl), and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which like in MASTL, also contains an insert relative to MAST kinases. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MASTL/Gwl is involved in the regulation of mitotic entry, mRNA stabilization, and DNA checkpoint recovery. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. The MAST-like kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270731 [Multi-domain]  Cd Length: 272  Bit Score: 106.92  E-value: 8.37e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  13 GTYGKVYKAMEKTTGKLVALKKtrleMDEEDSHRKGSNPRPLE------------------------------------- 55
Cdd:cd05579     4 GAYGRVYLAKKKSTGDLYAIKV----IKKRDMIRKNQVDSVLAernilsqaqnpfvvklyysfqgkknlylvmeylpggd 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  56 -ASLVQ----------RFMF-QLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSR--------------AFT 109
Cdd:cd05579    80 lYSLLEnvgaldedvaRIYIaEIVLALEYLHSHGIIHRDLKPDNILIDAN-GHLKLTDFGLSKvglvrrqiklsiqkKSN 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 110 VPLKAYTHEIV-TLWYRAPEVLLGSTHySTAVDIWSVGCIFAEMIRRQALFPGDSE---FQQLL--HIfrllgtpteqQW 183
Cdd:cd05579   159 GAPEKEDRRIVgTPDYLAPEILLGQGH-GKTVDWWSLGVILYEFLVGIPPFHAETPeeiFQNILngKI----------EW 227
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 184 PgvmalrdwhvypkwepqdlsrAVPSLSPEGIDLLTQMLKYNPAERISAKAALD---HPYFDSLD 245
Cdd:cd05579   228 P---------------------EDPEVSDEAKDLISKLLTPDPEKRLGAKGIEEiknHPFFKGID 271
STKc_Rim15_like cd05611
Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the ...
7-245 8.45e-28

Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. The Rim15-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270762 [Multi-domain]  Cd Length: 263  Bit Score: 106.80  E-value: 8.45e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   7 LEKVGEGTYGKVYKAMEKTTGKLVALKK------------TRLEMDEEDSHRKGSNPR---------------------- 52
Cdd:cd05611     1 LKPISKGAFGSVYLAKKRSTGDYFAIKVlkksdmiaknqvTNVKAERAIMMIQGESPYvaklyysfqskdylylvmeyln 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 ------------PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAftVPLKAYTHEIV 120
Cdd:cd05611    81 ggdcasliktlgGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ-TGHLKLTDFGLSRN--GLEKRHNKKFV 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 -TLWYRAPEVLLGSTHySTAVDIWSVGCIFAEMirrqaLFpGDSEFQQllhifrllGTPtEQQWPGVMALR-DWHvypkw 198
Cdd:cd05611   158 gTPDYLAPETILGVGD-DKMSDWWSLGCVIFEF-----LF-GYPPFHA--------ETP-DAVFDNILSRRiNWP----- 216
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 199 epqdlSRAVPSLSPEGIDLLTQMLKYNPAERISAKAAL---DHPYFDSLD 245
Cdd:cd05611   217 -----EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQeikSHPFFKSIN 261
STKc_LKB1_CaMKK cd14008
Catalytic domain of the Serine/Threonine kinases, Liver Kinase B1, Calmodulin Dependent ...
11-241 9.84e-28

Catalytic domain of the Serine/Threonine kinases, Liver Kinase B1, Calmodulin Dependent Protein Kinase Kinase, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Both LKB1 and CaMKKs can phosphorylate and activate AMP-activated protein kinase (AMPK). LKB1, also called STK11, serves as a master upstream kinase that activates AMPK and most AMPK-like kinases. LKB1 and AMPK are part of an energy-sensing pathway that links cell energy to metabolism and cell growth. They play critical roles in the establishment and maintenance of cell polarity, cell proliferation, cytoskeletal organization, as well as T-cell metabolism, including T-cell development, homeostasis, and effector function. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMPK. Vertebrates contain two CaMKKs, CaMKK1 (or alpha) and CaMKK2 (or beta). CaMKK1 is involved in the regulation of glucose uptake in skeletal muscles. CaMKK2 is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. The LKB1/CaMKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270910 [Multi-domain]  Cd Length: 267  Bit Score: 106.87  E-value: 9.84e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  11 GEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEE---------------------------------------DSHRK- 47
Cdd:cd14008     2 GRGSFGKVKLALDTETGQLYAIKifnKSRLRKRREgkndrgkiknalddvrreiaimkkldhpnivrlyeviddPESDKl 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 -----------------GSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTV 110
Cdd:cd14008    82 ylvleyceggpvmeldsGDRVPPLPEETARKYFRDLVLGLEYLHENGIVHRDIKPENLLLTAD-GTVKISDFGVSEMFED 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 PLKAYTHEIVTLWYRAPEVLLG-STHYST-AVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrlLGTPTEQQWPgvma 188
Cdd:cd14008   161 GNDTLQKTAGTPAFLAPELCDGdSKTYSGkAADIWALGVTLYCLVFGRLPFNGDNILELYEAI---QNQNDEFPIP---- 233
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 189 lrdwhvypkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14008   234 -------------------PELSPELKDLLRRMLEKDPEKRITLKEIKEHPWV 267
STKc_MEKK1_plant cd06632
Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP) ...
3-240 1.43e-27

Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of plant MAPK kinase kinases (MAPKKKs) including Arabidopsis thaliana MEKK1 and MAPKKK3. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270802 [Multi-domain]  Cd Length: 259  Bit Score: 106.33  E-value: 1.43e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLemDEEDSHRKGS---------------NPR--------------- 52
Cdd:cd06632     1 RWQKGQLLGSGSFGSVYEGFNGDTGDFFAVKEVSL--VDDDKKSRESvkqleqeiallsklrHPNivqyygtereednly 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 -------------------PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSR-----AF 108
Cdd:cd06632    79 ifleyvpggsihkllqrygAFEEPVIRLYTRQILSGLAYLHSRNTVHRDIKGANILVDTN-GVVKLADFGMAKhveafSF 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 109 TVPLKAYTHeivtlwYRAPEVLLG-STHYSTAVDIWSVGCIFAEMIRRQalfPGDSEFQQLLHIFRLLGTPTeqqwpgvm 187
Cdd:cd06632   158 AKSFKGSPY------WMAPEVIMQkNSGYGLAVDIWSLGCTVLEMATGK---PPWSQYEGVAAIFKIGNSGE-------- 220
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 188 alrdwhvYPkwepqdlsrAVP-SLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd06632   221 -------LP---------PIPdHLSPDAKDFIRLCLQRDPEDRPTASQLLEHPF 258
STKc_ULK3 cd14121
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 3; STKs catalyze the ...
8-240 1.99e-27

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK3 mRNA is up-regulated in fibroblasts after Ras-induced senescence, and its overexpression induces both autophagy and senescence in a fibroblast cell line. ULK3, through its kinase activity, positively regulates Gli proteins, mediators of the Sonic hedgehog (Shh) signaling pathway that is implicated in tissue homeostasis maintenance and neurogenesis. It is inhibited by binding to Suppressor of Fused (Sufu). The ULK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271023 [Multi-domain]  Cd Length: 252  Bit Score: 105.45  E-value: 1.99e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGK-LVALK---KTRL------------------------EM-----DEE------------ 42
Cdd:cd14121     1 EKLGSGTYATVYKAYRKSGAReVVAVKcvsKSSLnkastenllteiellkklkhphivELkdfqwDEEhiylimeycsgg 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 DSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGLSRAFTVPLKAYTHEIVT 121
Cdd:cd14121    81 DLSRFIRSRRTLPESTVRRFLQQLASALQFLREHNISHMDLKPQNLLLsSRYNPVLKLADFGFAQHLKPNDEAHSLRGSP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 122 LwYRAPEVLLGStHYSTAVDIWSVGCIFAEMIRRQALFPGDSeFQQLLHIFRllgtpteqqwpgvmalrdwhvypKWEPQ 201
Cdd:cd14121   161 L-YMAPEMILKK-KYDARVDLWSVGVILYECLFGRAPFASRS-FEELEEKIR-----------------------SSKPI 214
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1063706111 202 DLSRAvPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14121   215 EIPTR-PELSADCRDLLLRLLQRDPDRRISFEEFFAHPF 252
STKc_MST3_like cd06609
Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; STKs ...
2-240 2.27e-26

Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270786 [Multi-domain]  Cd Length: 274  Bit Score: 103.48  E-value: 2.27e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED------------------------SHRKGSN------- 50
Cdd:cd06609     1 ELFTLLERIGKGSFGEVYKGIDKRTNQVVAIKVIDLEEAEDEiediqqeiqflsqcdspyitkyygSFLKGSKlwiimey 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 -----------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEI 119
Cdd:cd06609    81 cgggsvldllkPGPLDETYIAFILREVLLGLEYLHSEGKIHRDIKAANILLSEE-GDVKLADFGVSGQLTSTMSKRNTFV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 120 VTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQalfPGDSEfqqlLHIFRLLgtpteqqwpgvmalrdwHVYPKWE 199
Cdd:cd06609   160 GTPFWMAPEVIKQSG-YDEKADIWSLGITAIELAKGE---PPLSD----LHPMRVL-----------------FLIPKNN 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 200 PQDLSRavPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd06609   215 PPSLEG--NKFSKPFKDFVELCLNKDPKERPSAKELLKHKF 253
STKc_NUAK cd14073
Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK; STKs catalyze ...
3-168 2.75e-26

Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NUAK proteins are classified as AMP-activated protein kinase (AMPK)-related kinases, which like AMPK are activated by the major tumor suppressor LKB1. Vertebrates contain two NUAK proteins, called NUAK1 and NUAK2. NUAK1, also called ARK5 (AMPK-related protein kinase 5), regulates cell proliferation and displays tumor suppression through direct interaction and phosphorylation of p53. It is also involved in cell senescence and motility. High NUAK1 expression is associated with invasiveness of nonsmall cell lung cancer (NSCLC) and breast cancer cells. NUAK2, also called SNARK (Sucrose, non-fermenting 1/AMP-activated protein kinase-related kinase), is involved in energy metabolism. It is activated by hyperosmotic stress, DNA damage, and nutrients such as glucose and glutamine. NUAK2-knockout mice develop obesity, altered serum lipid profiles, hyperinsulinaemia, hyperglycaemia, and impaired glucose tolerance. The NUAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270975 [Multi-domain]  Cd Length: 254  Bit Score: 102.47  E-value: 2.75e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEmDEEDSHR--------------------------------- 46
Cdd:cd14073     2 RYELLETLGKGTYGKVKLAIERATGREVAIKsikKDKIE-DEQDMVRirreieimsslnhphiiriyevfenkdkivivm 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ----KG------SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTvplkayT 116
Cdd:cd14073    81 eyasGGelydyiSERRRLPEREARRIFRQIVSAVHYCHKNGVVHRDLKLENILLD-QNGNAKIADFGLSNLYS------K 153
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 117 HEIVTLW-----YRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGdSEFQQL 168
Cdd:cd14073   154 DKLLQTFcgsplYASPEIVNGTPYQGPEVDCWSLGVLLYTLVYGTMPFDG-SDFKRL 209
STKc_TSSK-like cd14080
Catalytic domain of testis-specific serine/threonine kinases and similar proteins; STKs ...
4-241 8.61e-26

Catalytic domain of testis-specific serine/threonine kinases and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK1 and TSSK2 are expressed specifically in meiotic and postmeiotic spermatogenic cells, respectively. TSSK3 has been reported to be expressed in the interstitial Leydig cells of adult testis. TSSK4, also called TSSK5, is expressed in testis from haploid round spermatids to mature spermatozoa. TSSK6, also called SSTK, is expressed at the head of elongated sperm. TSSK1/TSSK2 double knock-out and TSSK6 null mice are sterile without manifesting other defects, making these kinases viable targets for male contraception. The TSSK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270982 [Multi-domain]  Cd Length: 262  Bit Score: 101.49  E-value: 8.61e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKA--MEKTTGKLVALK---KTRLEMD--------EEDSHRKGSNP------------------- 51
Cdd:cd14080     2 YRLGKTIGEGSYSKVKLAeyTKSGLKEKVACKiidKKKAPKDflekflprELEILRKLRHPniiqvysifergskvfifm 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 ---------------RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTvplKAYT 116
Cdd:cd14080    82 eyaehgdlleyiqkrGALSESQARIWFRQLALAVQYLHSLDIAHRDLKCENILLDSNNNV-KLSDFGFARLCP---DDDG 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIVT-----LWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFpGDSEFQQLLhifrllgtptEQQWPgvmalRD 191
Cdd:cd14080   158 DVLSKtfcgsAAYAAPEILQGIPYDPKKYDIWSLGVILYIMLCGSMPF-DDSNIKKML----------KDQQN-----RK 221
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 192 WHVYPKWEPqdlsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14080   222 VRFPSSVKK---------LSPECKDLIDQLLEPDPTKRATIEEILNHPWL 262
STKc_SnRK3 cd14663
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
3-240 9.53e-26

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK3 is represented in this cd. The SnRK3 group contains members also known as CBL-interacting protein kinase, salt overly sensitive 2, SOS3-interacting proteins and protein kinase S. These kinases interact with calcium-binding proteins such as SOS3, SCaBPs, and CBL proteins, and are involved in responses to salt stress and in sugar and ABA signaling. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271133 [Multi-domain]  Cd Length: 256  Bit Score: 101.33  E-value: 9.53e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK------KTRLEMDEE---------------------------------- 42
Cdd:cd14663     1 RYELGRTLGEGTFAKVKFARNTKTGESVAIKiidkeqVAREGMVEQikreiaimkllrhpnivelhevmatktkiffvme 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 -----DSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSrAFTVPLKAYT- 116
Cdd:cd14663    81 lvtggELFSKIAKNGRLKEDKARKYFQQLIDAVDYCHSRGVFHRDLKPENLLLDED-GNLKISDFGLS-ALSEQFRQDGl 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 -HEIV-TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIrrQALFPGDSEfqQLLHIFRLLGtptEQQWPgvmalrdwhv 194
Cdd:cd14663   159 lHTTCgTPNYVAPEVLARRGYDGAKADIWSCGVILFVLL--AGYLPFDDE--NLMALYRKIM---KGEFE---------- 221
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 195 YPKWepqdlsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14663   222 YPRW-----------FSPGAKSLIKRILDPNPSTRITVEQIMASPW 256
STKc_Chk1 cd14069
Catalytic domain of the Serine/Threonine kinase, Checkpoint kinase 1; STKs catalyze the ...
2-241 9.99e-26

Catalytic domain of the Serine/Threonine kinase, Checkpoint kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chk1 is implicated in many major checkpoints of the cell cycle, providing a link between upstream sensors and the cell cycle engine. It plays an important role in DNA damage response and maintaining genomic stability. Chk1 acts as an effector of the sensor kinase, ATR (ATM and Rad3-related), a member of the PI3K family, which is activated upon DNA replication stress. Chk1 delays mitotic entry in response to replication blocks by inhibiting cyclin dependent kinase (Cdk) activity. In addition, Chk1 contributes to the function of centrosome and spindle-based checkpoints, inhibits firing of origins of DNA replication (Ori), and represses transcription of cell cycle proteins including cyclin B and Cdk1. The Chk1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270971 [Multi-domain]  Cd Length: 261  Bit Score: 101.25  E-value: 9.99e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKK---TRLEMDEEDSHRK-----------------GSNPRP-------- 53
Cdd:cd14069     1 EDWDLVQTLGEGAFGEVFLAVNRNTEEAVAVKFvdmKRAPGDCPENIKKevciqkmlshknvvrfyGHRREGefqylfle 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 ----------------LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTV--PLKAY 115
Cdd:cd14069    81 yasggelfdkiepdvgMPEDVAQFYFQQLMAGLKYLHSCGITHRDIKPENLLLDE-NDNLKISDFGLATVFRYkgKERLL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQalFPGD--SEFQQLLHIFRLLGTPTEQQWPGvmalrdwh 193
Cdd:cd14069   160 NKMCGTLPYVAPELLAKKKYRAEPVDVWSCGIVLFAMLAGE--LPWDqpSDSCQEYSDWKENKKTYLTPWKK-------- 229
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 194 vypkwepqdlsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14069   230 ----------------IDTAALSLLRKILTENPNKRITIEDIKKHPWY 261
STKc_PRP4 cd14135
Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4; STKs catalyze ...
54-241 2.03e-25

Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PRP4 phosphorylates a number of factors involved in the formation of active spliceosomes, which catalyze pre-mRNA splicing. It phosphorylates PRP6 and PRP31, components of the U4/U6-U5 tri-small nuclear ribonucleoprotein (snRNP), during spliceosomal complex formation. In fission yeast, PRP4 phosphorylates the splicing factor PRP1 (U5-102 kD in mammals). Thus, PRP4 plays a key role in regulating spliceosome assembly and pre-mRNA splicing. It also plays an important role in mitosis by acting as a spindle assembly checkpoint kinase that is required for chromosome alignment and the recruitment of the checkpoint proteins MPS1, MAD1, and MAD2 at kinetochores. The PRP4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271037 [Multi-domain]  Cd Length: 318  Bit Score: 101.53  E-value: 2.03e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGlsRAFTVPLKAYTHEIVTLWYRAPEVLLGS 133
Cdd:cd14135   102 LNIKAVRSYAQQLFLALKHLKKCNILHADIKPDNILVNEKKNTLKLCDFG--SASDIGENEITPYLVSRFYRAPEIILGL 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 134 ThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPteqqwPGVM----ALRDWHVYP----------KWE 199
Cdd:cd14135   180 P-YDYPIDMWSVGCTLYELYTGKILFPGKTNNHMLKLMMDLKGKF-----PKKMlrkgQFKDQHFDEnlnfiyrevdKVT 253
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 200 PQDLSRAVPSLSP-----------------------EGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14135   254 KKEVRRVMSDIKPtkdlktlligkqrlpdedrkkllQLKDLLDKCLMLDPEKRITPNEALQHPFI 318
STKc_Nek2 cd08217
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
3-152 2.12e-25

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Nek2 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. It The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270857 [Multi-domain]  Cd Length: 265  Bit Score: 100.31  E-value: 2.12e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR-LEMDEEDSH---------RKGSNP--------------------- 51
Cdd:cd08217     1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDyGKMSEKEKQqlvsevnilRELKHPnivryydrivdranttlyivm 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 -------------------RPLEASLVQRFMFQLFKGVAHCHSHG-----VLHRDLKPQNLLLDKDKGIlKIADLGLSRA 107
Cdd:cd08217    81 eyceggdlaqlikkckkenQYIPEEFIWKIFTQLLLALYECHNRSvgggkILHRDLKPANIFLDSDNNV-KLGDFGLARV 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 108 FTVPLKaYTHEIV-TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEM 152
Cdd:cd08217   160 LSHDSS-FAKTYVgTPYYMSPELLNEQS-YDEKSDIWSLGCLIYEL 203
STKc_BRSK1_2 cd14081
Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2; STKs catalyze the ...
6-241 4.03e-25

Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BRSK1, also called SAD-B or SAD1 (Synapses of Amphids Defective homolog 1), and BRSK2, also called SAD-A, are highly expressed in mammalian forebrain. They play important roles in establishing neuronal polarity. BRSK1/2 double knock-out mice die soon after birth, showing thin cerebral cortices due to disordered subplate layers and neurons that lack distinct axons and dendrites. BRSK1 regulates presynaptic neurotransmitter release. Its activity fluctuates during cell cysle progression and it acts as a regulator of centrosome duplication. BRSK2 is also abundant in pancreatic islets, where it is involved in the regulation of glucose-stimulated insulin secretion. The BRSK1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270983 [Multi-domain]  Cd Length: 255  Bit Score: 99.64  E-value: 4.03e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   6 KLEK-VGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDE---------------------------EDS--------HR 46
Cdd:cd14081     4 RLGKtLGKGQTGLVKLAKHCVTGQKVAIKivnKEKLSKESvlmkvereiaimkliehpnvlklydvyENKkylylvleYV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 KG-------SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSR--AFTVPLKAYT- 116
Cdd:cd14081    84 SGgelfdylVKKGRLTEKEARKFFRQIISALDYCHSHSICHRDLKPENLLLDEKNNI-KIADFGMASlqPEGSLLETSCg 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 --HeivtlwYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSeFQQLLHIFRllgtpteqqwpgvmalRDWHV 194
Cdd:cd14081   163 spH------YACPEVIKGEKYDGRKADIWSCGVILYALLVGALPFDDDN-LRQLLEKVK----------------RGVFH 219
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 195 YPkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14081   220 IP-----------HFISPDAQDLLRRMLEVNPEKRITIEEIKKHPWF 255
STKc_Nek6_7 cd08224
Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related ...
3-162 5.46e-25

Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related kinase 6 and 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Nek6/7 is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270863 [Multi-domain]  Cd Length: 262  Bit Score: 99.27  E-value: 5.46e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRL-EMDEEDSHRK---------------------------------- 47
Cdd:cd08224     1 NYEIEKKIGKGQFSVVYRARCLLDGRLVALKKVQIfEMMDAKARQDclkeidllqqlnhpniikylasfiennelnivle 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 --------------GSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLK 113
Cdd:cd08224    81 ladagdlsrlikhfKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITAN-GVVKLGDLGLGRFFSSKTT 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AyTHEIV-TLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGD 162
Cdd:cd08224   160 A-AHSLVgTPYYMSPERIRE-QGYDFKSDIWSLGCLLYEMAALQSPFYGE 207
PKc_MAPKK_plant_like cd06623
Catalytic domain of Plant dual-specificity Mitogen-Activated Protein Kinase Kinases and ...
5-239 6.59e-25

Catalytic domain of Plant dual-specificity Mitogen-Activated Protein Kinase Kinases and similar proteins; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis; MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling; MKK2 is involved in cold and salt stress signaling; MKK4/MKK5 participates in innate immunity; and MKK7 regulates basal and systemic acquired resistance. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132954 [Multi-domain]  Cd Length: 264  Bit Score: 99.20  E-value: 6.59e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   5 EKLEKVGEGTYGKVYKAMEKTTGKLVALKKtrLEMDEEDSHRK---------------------GSNPRPLEASLVQRFM 63
Cdd:cd06623     4 ERVKVLGQGSSGVVYKVRHKPTGKIYALKK--IHVDGDEEFRKqllrelktlrscespyvvkcyGAFYKEGEISIVLEYM 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 ------------------------FQLFKGVAHCHS-HGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTvPLKAYTHE 118
Cdd:cd06623    82 dggsladllkkvgkipepvlayiaRQILKGLDYLHTkRHIIHRDIKPSNLLINS-KGEVKIADFGISKVLE-NTLDQCNT 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IV-TLWYRAPEVLLGStHYSTAVDIWSVGCIFAEMIRRQalFPgdseFQqllhifrllgtPTEQqwPGVMALRDwHVypk 197
Cdd:cd06623   160 FVgTVTYMSPERIQGE-SYSYAADIWSLGLTLLECALGK--FP----FL-----------PPGQ--PSFFELMQ-AI--- 215
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 198 wepqdLSRAVPSL-----SPEGIDLLTQMLKYNPAERISAKAALDHP 239
Cdd:cd06623   216 -----CDGPPPSLpaeefSPEFRDFISACLQKDPKKRPSAAELLQHP 257
STKc_HAL4_like cd13994
Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases; STKs ...
46-241 8.74e-25

Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of HAL4, Saccharomyces cerevisiae Ptk2/Stk2, and similar fungal proteins. Proteins in this subfamily are involved in regulating ion transporters. In budding and fission yeast, HAL4 promotes potassium ion uptake, which increases cellular resistance to other cations such as sodium, lithium, and calcium ions. HAL4 stabilizes the major high-affinity K+ transporter Trk1 at the plasma membrane under low K+ conditions, which prevents endocytosis and vacuolar degradation. Budding yeast Ptk2 phosphorylates and regulates the plasma membrane H+ ATPase, Pma1. The HAL4-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270896 [Multi-domain]  Cd Length: 265  Bit Score: 98.92  E-value: 8.74e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 RKGSNPRPLEASLvqrFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVP---LKAYTHEIV-T 121
Cdd:cd13994    90 EKADSLSLEEKDC---FFKQILRGVAYLHSHGIAHRDLKPENILLDED-GVLKLTDFGTAEVFGMPaekESPMSAGLCgS 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 122 LWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALF----PGDSEFQQLLHIFRLLGTPTEQqwpgvmalrdwhvypk 197
Cdd:cd13994   166 EPYMAPEVFTSGSYDGRAVDVWSCGIVLFALFTGRFPWrsakKSDSAYKAYEKSGDFTNGPYEP---------------- 229
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 198 wepqdlsrAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd13994   230 --------IENLLPSECRRLIYRMLHPDPEKRITIDEALNDPWV 265
PKc_DYRK2_3 cd14224
Catalytic domain of the protein kinases, Dual-specificity tYrosine-phosphorylated and ...
3-240 1.09e-24

Catalytic domain of the protein kinases, Dual-specificity tYrosine-phosphorylated and -Regulated Kinases 2 and 3; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of DYRK2 and DYRK3, and similar proteins. Drosophila DYRK2 interacts and phosphorylates the chromatin remodelling factor, SNR1 (Snf5-related 1), and also interacts with the essential chromatin component, trithorax. It may play a role in chromatin remodelling. Vertebrate DYRK2 phosphorylates and regulates the tumor suppressor p53 to induce apoptosis in response to DNA damage. It can also phosphorylate the transcription factor, nuclear factor of activated T cells (NFAT). DYRK2 is overexpressed in lung adenocarcinoma and esophageal carcinomas, and is a predictor for favorable prognosis in lung adenocarcinoma. DYRK3, also called regulatory erythroid kinase (REDK), is highly expressed in erythroid cells and the testis, and is also present in adult kidney and liver. It promotes cell survival by phosphorylating and activating SIRT1, an NAD(+)-dependent protein deacetylase, which promotes p53 deacetylation, resulting in the inhibition of apoptosis. DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. The DYRK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other S/T kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271126 [Multi-domain]  Cd Length: 380  Bit Score: 100.59  E-value: 1.09e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRlemDEEDSHRKGSNP-RPLEA------------------------- 56
Cdd:cd14224    66 RYEVLKVIGKGSFGQVVKAYDHKTHQHVALKMVR---NEKRFHRQAAEEiRILEHlkkqdkdntmnvihmlesftfrnhi 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  57 ------------SLVQR-----FMFQLFKGVAH----C----HSHGVLHRDLKPQNLLLdKDKGI--LKIADLGlSRAFT 109
Cdd:cd14224   143 cmtfellsmnlyELIKKnkfqgFSLQLVRKFAHsilqCldalHRNKIIHCDLKPENILL-KQQGRsgIKVIDFG-SSCYE 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 110 vPLKAYTHeIVTLWYRAPEVLLGStHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQ-------- 181
Cdd:cd14224   221 -HQRIYTY-IQSRFYRAPEVILGA-RYGMPIDMWSFGCILAELLTGYPLFPGEDEGDQLACMIELLGMPPQKlletskra 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 182 ----------QWPGVMALRDWHVY--------PKW----EPQDLSRAVPSLS-PEGIDLLTQMLKYNPAERISAKAALDH 238
Cdd:cd14224   298 knfisskgypRYCTVTTLPDGSVVlnggrsrrGKMrgppGSKDWVTALKGCDdPLFLDFLKRCLEWDPAARMTPSQALRH 377

                  ..
gi 1063706111 239 PY 240
Cdd:cd14224   378 PW 379
STKc_EIF2AK cd13996
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
4-236 1.80e-24

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: General Control Non-derepressible-2 (GCN2) which is activated during amino acid or serum starvation; protein kinase regulated by RNA (PKR) which is activated by double stranded RNA; heme-regulated inhibitor kinase (HRI) which is activated under heme-deficient conditions; and PKR-like endoplasmic reticulum kinase (PERK) which is activated when misfolded proteins accumulate in the ER. The EIF2AK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270898 [Multi-domain]  Cd Length: 273  Bit Score: 98.13  E-value: 1.80e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRL---------EMDEEDSHRKGSNP----------------------- 51
Cdd:cd13996     8 FEEIELLGSGGFGSVYKVRNKVDGVTYAIKKIRLtekssasekVLREVKALAKLNHPnivryytawveepplyiqmelce 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 -RPLEASLVQRF------------MF-QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSR---AFTVPLK- 113
Cdd:cd13996    88 gGTLRDWIDRRNssskndrklaleLFkQILKGVSYIHSKGIVHRDLKPSNIFLDNDDLQVKIGDFGLATsigNQKRELNn 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 ----------AYTHEIVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMirrqaLFPGDSEFQQLLHI--FRLLGTPTEq 181
Cdd:cd13996   168 lnnnnngntsNNSVGIGTPLYASPEQLDG-ENYNEKADIYSLGIILFEM-----LHPFKTAMERSTILtdLRNGILPES- 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 182 qwpgvmaLRDWHvyPKWepqdlsravpslspegIDLLTQMLKYNPAERISAKAAL 236
Cdd:cd13996   241 -------FKAKH--PKE----------------ADLIQSLLSKNPEERPSAEQLL 270
STKc_MAP4K3_like cd06613
Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like ...
3-241 3.87e-24

Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270788 [Multi-domain]  Cd Length: 259  Bit Score: 96.99  E-value: 3.87e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE-----------------------DSHRKGSN--------- 50
Cdd:cd06613     1 DYELIQRIGSGTYGDVYKARNIATGELAAVKVIKLEPGDDfeiiqqeismlkecrhpnivayfGSYLRRDKlwivmeycg 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 ----------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIV 120
Cdd:cd06613    81 ggslqdiyqvTGPLSELQIAYVCRETLKGLAYLHSTGKIHRDIKGANILLTED-GDVKLADFGVSAQLTATIAKRKSFIG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLL--GSTHYSTAVDIWSVGCIFAEMIRRQalfPGDSEfqqlLHIFRLLGTPTEQQWPGVMaLRDWHvypKW 198
Cdd:cd06613   160 TPYWMAPEVAAveRKGGYDGKCDIWALGITAIELAELQ---PPMFD----LHPMRALFLIPKSNFDPPK-LKDKE---KW 228
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 199 epqdlsravpslSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06613   229 ------------SPDFHDFIKKCLTKNPKKRPTATKLLQHPFV 259
STKc_CaMKII cd14086
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
63-240 4.32e-24

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKs contain an N-terminal catalytic domain followed by a regulatory domain that harbors a CaM binding site. In addition, CaMKII contains a C-terminal association domain that facilitates oligomerization. There are four CaMKII proteins (alpha, beta, gamma, delta) encoded by different genes; each gene undergoes alternative splicing to produce more than 30 isoforms. CaMKII-alpha and -beta are enriched in neurons while CaMKII-gamma and -delta are predominant in myocardium. CaMKII is a signaling molecule that translates upstream calcium and reactive oxygen species (ROS) signals into downstream responses that play important roles in synaptic function and cardiovascular physiology. It is a major component of the postsynaptic density and is critical in regulating synaptic plasticity including long-term potentiation. It is critical in regulating ion channels and proteins involved in myocardial excitation-contraction and excitation-transcription coupling. Excessive CaMKII activity promotes processes that contribute to heart failure and arrhythmias. The CaMKII subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270988 [Multi-domain]  Cd Length: 292  Bit Score: 97.49  E-value: 4.32e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 MFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKG-ILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVlLGSTHYSTAV 140
Cdd:cd14086   106 IQQILESVNHCHQNGIVHRDLKPENLLLaSKSKGaAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV-LRKDPYGKPV 184
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 141 DIWSVGCIfaemirrqalfpgdsefqqlLHIFrLLGTP----TEQQ--WPGVMALRDWHVYPKWEpqdlsravpSLSPEG 214
Cdd:cd14086   185 DIWACGVI--------------------LYIL-LVGYPpfwdEDQHrlYAQIKAGAYDYPSPEWD---------TVTPEA 234
                         170       180
                  ....*....|....*....|....*.
gi 1063706111 215 IDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14086   235 KDLINQMLTVNPAKRITAAEALKHPW 260
STKc_Byr2_like cd06628
Catalytic domain of the Serine/Threonine Kinases, fungal Byr2-like Mitogen-Activated Protein ...
10-240 6.19e-24

Catalytic domain of the Serine/Threonine Kinases, fungal Byr2-like Mitogen-Activated Protein Kinase Kinase Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. The Byr2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270798 [Multi-domain]  Cd Length: 267  Bit Score: 96.83  E-value: 6.19e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTRLEMDE---EDSHRK------------------------GSNPR---------- 52
Cdd:cd06628     8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSaenKDRKKSmldalqreiallrelqhenivqylGSSSDanhlnifley 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 --------------PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd06628    88 vpggsvatllnnygAFEESLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD-NKGGIKISDFGISKKLEANSLSTKNN 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IV------TLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPgdsEFQQLLHIFRL--LGTPTeqqwpgvmalr 190
Cdd:cd06628   167 GArpslqgSVFWMAPEV-VKQTSYTRKADIWSLGCLVVEMLTGTHPFP---DCTQMQAIFKIgeNASPT----------- 231
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 191 dwhvYPkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd06628   232 ----IP-----------SNISSEARDFLEKTFEIDHNKRPTADELLKHPF 266
STKc_DRAK cd14106
Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
59-241 8.19e-24

Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs, also called STK17, were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 and DRAK2. Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. They may play a role in apoptotic signaling. The DRAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271008 [Multi-domain]  Cd Length: 268  Bit Score: 96.27  E-value: 8.19e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDK--GILKIADLGLSRAftVPLKAYTHEIV-TLWYRAPEVLlgstH 135
Cdd:cd14106   110 VRRLMRQILEGVQYLHERNIVHLDLKPQNILLTSEFplGDIKLCDFGISRV--IGEGEEIREILgTPDYVAPEIL----S 183
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 136 Y---STAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVmalrdwhvypkwepqdlsravpslSP 212
Cdd:cd14106   184 YepiSLATDMWSIGVLTYVLLTGHSPFGGDDKQETFLNISQCNLDFPEELFKDV------------------------SP 239
                         170       180
                  ....*....|....*....|....*....
gi 1063706111 213 EGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14106   240 LAIDFIKRLLVKDPEKRLTAKECLEHPWL 268
STKc_PDK1 cd05581
Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1; STKs ...
4-241 1.00e-23

Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. It is essential for normal embryo development and is important in regulating cell volume. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270733 [Multi-domain]  Cd Length: 278  Bit Score: 96.13  E-value: 1.00e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK-----------KTRLEMDEEDSHRKGSNP--------------------- 51
Cdd:cd05581     3 FKFGKPLGEGSYSTVVLAKEKETGKEYAIKvldkrhiikekKVKYVTIEKEVLSRLAHPgivklyytfqdesklyfvley 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 ---RPLEASL----------VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd05581    83 apnGDLLEYIrkygsldekcTRFYTAEIVLALEYLHSKGIIHRDLKPENILLDEDMHI-KITDFGTAKVLGPDSSPESTK 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IV-----------------TLWYRAPEvLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtptEQ 181
Cdd:cd05581   162 GDadsqiaynqaraasfvgTAEYVSPE-LLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIVKL-----EY 235
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 182 QWPgvmalrdwhvypkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALD------HPYF 241
Cdd:cd05581   236 EFP-----------------------ENFPPDAKDLIQKLLVLDPSKRLGVNENGGydelkaHPFF 278
STKc_AMPK_alpha cd14079
Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein ...
11-241 1.18e-23

Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. AMPK, also called SNF1 (sucrose non-fermenting1) in yeasts and SnRK1 (SNF1-related kinase1) in plants, is a heterotrimeric enzyme composed of a catalytic alpha subunit and two regulatory subunits, beta and gamma. It is a stress-activated kinase that serves as master regulator of glucose and lipid metabolism by monitoring carbon and energy supplies, via sensing the cell's AMP:ATP ratio. In response to decreased ATP levels, it enhances energy-producing processes and inhibits energy-consuming pathways. Once activated, AMPK phosphorylates a broad range of downstream targets, with effects in carbohydrate metabolism and uptake, lipid and fatty acid biosynthesis, carbon energy storage, and inflammation, among others. Defects in energy homeostasis underlie many human diseases including Type 2 diabetes, obesity, heart disease, and cancer. As a result, AMPK has emerged as a therapeutic target in the treatment of these diseases. The AMPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270981 [Multi-domain]  Cd Length: 256  Bit Score: 95.80  E-value: 1.18e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  11 GEGTYGKVYKAMEKTTGKLVALK---KTRLE-MD-EEDSHRKGSNPR----------------PLEASLV---------- 59
Cdd:cd14079    11 GVGSFGKVKLAEHELTGHKVAVKilnRQKIKsLDmEEKIRREIQILKlfrhphiirlyevietPTDIFMVmeyvsggelf 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  60 --------------QRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFT----------VPLkay 115
Cdd:cd14079    91 dyivqkgrlsedeaRRFFQQIISGVEYCHRHMVVHRDLKPENLLLDSNMNV-KIADFGLSNIMRdgeflktscgSPN--- 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 theivtlwYRAPEVLLGSTHYSTAVDIWSVGCI-FAEMIRRqalFPGDSEFQQLLhiFRLLGTpteqqwpGVMALRDWhv 194
Cdd:cd14079   167 --------YAAPEVISGKLYAGPEVDVWSCGVIlYALLCGS---LPFDDEHIPNL--FKKIKS-------GIYTIPSH-- 224
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 195 ypkwepqdlsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14079   225 ---------------LSPGARDLIKRMLVVDPLKRITIPEIRQHPWF 256
STKc_MEKK3_like cd06625
Catalytic domain of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) ...
10-241 1.65e-23

Catalytic domain of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MEKK3, MEKK2, and related proteins; all contain an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are MAPK kinase kinases (MAPKKKs or MKKK) that activate MEK5 (also called MKK5), which activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270795 [Multi-domain]  Cd Length: 260  Bit Score: 95.50  E-value: 1.65e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHRK-----------------------------------------G 48
Cdd:cd06625     8 LGQGAFGQVYLCYDADTGRELAVKQVEIDPINTEASKEvkaleceiqllknlqherivqyygclqdekslsifmeympgG 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 S------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLS-RAFTVPLKAYTHEIV- 120
Cdd:cd06625    88 SvkdeikAYGALTENVTRKYTRQILEGLAYLHSNMIVHRDIKGANILRDSN-GNVKLGDFGASkRLQTICSSTGMKSVTg 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSTHYSTAvDIWSVGCIFAEMIRRQalfPGDSEFQQLLHIFRLLGTPTEQQWPgvmalrdwhvypkwep 200
Cdd:cd06625   167 TPYWMSPEVINGEGYGRKA-DIWSVGCTVVEMLTTK---PPWAEFEPMAAIFKIATQPTNPQLP---------------- 226
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 201 qdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06625   227 -------PHVSEDARDFLSLIFVRNKKQRPSAEELLSHSFV 260
STKc_SNRK cd14074
Catalytic domain of the Serine/Threonine Kinase, SNF1-related kinase; STKs catalyze the ...
49-240 2.15e-23

Catalytic domain of the Serine/Threonine Kinase, SNF1-related kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SNRK is a kinase highly expressed in testis and brain that is found inactive in cells that lack the LKB1 tumour suppressor protein kinase. The regulatory subunits STRAD and MO25 are required for LKB1 to activate SNRK. The SNRK mRNA is increased 3-fold when granule neurons are cultured in low potassium, and may thus play a role in the survival responses in these cells. In some vertebrates, a second SNRK gene (snrkb or snrk-1) has been sequenced and/or identified. Snrk-1 is expressed specifically in embryonic zebrafish vasculature; it plays an essential role in angioblast differentiation, maintenance, and migration. The SNRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270976 [Multi-domain]  Cd Length: 258  Bit Score: 95.17  E-value: 2.15e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFtVPLKAYTHEIVTLWYRAPE 128
Cdd:cd14074    95 KHENGLNEDLARKYFRQIVSAISYCHKLHVVHRDLKPENVVFFEKQGLVKLTDFGFSNKF-QPGEKLETSCGSLAYSAPE 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 129 VLLGSTHYSTAVDIWSVGCIFAEMIRRQALF--PGDSEfqQLLHIFrllgtpteqqwpgvmalrdwhvypkwepqDLSRA 206
Cdd:cd14074   174 ILLGDEYDAPAVDIWSLGVILYMLVCGQPPFqeANDSE--TLTMIM-----------------------------DCKYT 222
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1063706111 207 VPS-LSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14074   223 VPAhVSPECKDLIRRMLIRDPKKRASLEEIENHPW 257
STKc_PKC cd05570
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase C; STKs catalyze the transfer ...
9-245 2.73e-23

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270722 [Multi-domain]  Cd Length: 318  Bit Score: 95.74  E-value: 2.73e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   9 KV-GEGTYGKVYKAMEKTTGKLVA---LKKTRLEMDEE-DSHR-------KGSNPrPLEASLVQRF-------------- 62
Cdd:cd05570     1 KVlGKGSFGKVMLAERKKTDELYAikvLKKEVIIEDDDvECTMtekrvlaLANRH-PFLTGLHACFqtedrlyfvmeyvn 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 ----MFQLFK------------------GVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIV 120
Cdd:cd05570    80 ggdlMFHIQRarrfteerarfyaaeiclALQFLHERGIIYRDLKLDNVLLDAE-GHIKIADFGMCKEGIWGGNTTSTFCG 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSE---FQQLLHifrllgtpteqqwpgvmalrDWHVYPK 197
Cdd:cd05570   159 TPDYIAPEILREQD-YGFSVDWWALGVLLYEMLAGQSPFEGDDEdelFEAILN--------------------DEVLYPR 217
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 198 WepqdlsravpsLSPEGIDLLTQMLKYNPAERI--SAKAALD---HPYFDSLD 245
Cdd:cd05570   218 W-----------LSREAVSILKGLLTKDPARRLgcGPKGEADikaHPFFRNID 259
STKc_CNK2-like cd08530
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii CNK2 and similar ...
4-239 3.42e-23

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii CNK2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. This subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270869 [Multi-domain]  Cd Length: 256  Bit Score: 94.38  E-value: 3.42e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRL----EMDEEDS----------------------------------- 44
Cdd:cd08530     2 FKVLKKLGKGSYGSVYKVKRLSDNQVYALKEVNLgslsQKEREDSvneirllasvnhpniirykeafldgnrlcivmeya 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 ---------HRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLkAY 115
Cdd:cd08530    82 pfgdlskliSKRKKKRRLFPEDDIWRIFIQMLRGLKALHDQKILHRDLKSANILL-SAGDLVKIGDLGISKVLKKNL-AK 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 ThEIVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSefQQLLHIFRLLGTPTeqqwpgvmalRDWHVY 195
Cdd:cd08530   160 T-QIGTPLYAAPEVWKG-RPYDYKSDIWSLGCLLYEMATFRPPFEART--MQELRYKVCRGKFP----------PIPPVY 225
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 196 pkwePQDLSRAVPSlspegidlltqMLKYNPAERISAKAALDHP 239
Cdd:cd08530   226 ----SQDLQQIIRS-----------LLQVNPKKRPSCDKLLQSP 254
STKc_PhKG cd14093
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; STKs ...
61-241 3.52e-23

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). Each subunit has tissue-specific isoforms or splice variants. Vertebrates contain two isoforms of the gamma subunit (gamma 1 and gamma 2). The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270995 [Multi-domain]  Cd Length: 272  Bit Score: 94.73  E-value: 3.52e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGlsraFTVPLKA--YTHEIV-TLWYRAPEVL-----LG 132
Cdd:cd14093   113 RIMRQLFEAVEFLHSLNIVHRDLKPENILLDDNLNV-KISDFG----FATRLDEgeKLRELCgTPGYLAPEVLkcsmyDN 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 133 STHYSTAVDIWSVGCIfaeMIRRQALFPGDSEFQQLLhIFRLlgtpteqqwpgVMALRDWHVYPKWEpqDLSRAVPslsp 212
Cdd:cd14093   188 APGYGKEVDMWACGVI---MYTLLAGCPPFWHRKQMV-MLRN-----------IMEGKYEFGSPEWD--DISDTAK---- 246
                         170       180
                  ....*....|....*....|....*....
gi 1063706111 213 egiDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14093   247 ---DLISKLLVVDPKKRLTAEEALEHPFF 272
STKc_RSK_C cd14091
C-terminal catalytic domain of the Serine/Threonine Kinases, Ribosomal S6 kinases; STKs ...
4-241 5.17e-23

C-terminal catalytic domain of the Serine/Threonine Kinases, Ribosomal S6 kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), 90 kDa ribosomal protein S6 kinases (p90-RSKs), or p90S6Ks. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270993 [Multi-domain]  Cd Length: 291  Bit Score: 94.62  E-value: 5.17e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDS--HRKGSNP-------------------------RP 53
Cdd:cd14091     2 YEIKEEIGKGSYSVCKRCIHKATGKEYAVKiidKSKRDPSEEIEilLRYGQHPniitlrdvyddgnsvylvtellrggEL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRF---------MFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG---ILKIADLGlsraFTVPLKA------- 114
Cdd:cd14091    82 LDRILRQKFfsereasavMKTLTKTVEYLHSQGVVHRDLKPSNILYADESGdpeSLRICDFG----FAKQLRAengllmt 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 --YTHEIVtlwyrAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALF---PGDSEFQQLLHI----FRLLGtpteqqwpg 185
Cdd:cd14091   158 pcYTANFV-----APEV-LKKQGYDAACDIWSLGVLLYTMLAGYTPFasgPNDTPEVILARIgsgkIDLSG--------- 222
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 186 vmalrdwhvyPKWEpqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14091   223 ----------GNWD---------HVSDSAKDLVRKMLHVDPSQRPTAAQVLQHPWI 259
STKc_GRK cd05577
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase; STKs ...
10-245 5.57e-23

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. They contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7, which are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270729 [Multi-domain]  Cd Length: 278  Bit Score: 94.52  E-value: 5.57e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKK-----------TRLEMDEEDSHRKGSNP----------RPLEASLVQRFM----- 63
Cdd:cd05577     1 LGRGGFGEVCACQVKATGKMYACKKldkkrikkkkgETMALNEKIILEKVSSPfivslayafeTKDKLCLVLTLMnggdl 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 -FQLFK--------------------GVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLsrAFTVPLKAYTHEIV-T 121
Cdd:cd05577    81 kYHIYNvgtrgfsearaifyaaeiicGLEHLHNRFIVYRDLKPENILLD-DHGHVRISDLGL--AVEFKGGKKIKGRVgT 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 122 LWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRrqalfpGDSEFQQllhifrlLGTPTEQQWPGVMALRDWHVYPKwepq 201
Cdd:cd05577   158 HGYMAPEVLQKEVAYDFSVDWFALGCMLYEMIA------GRSPFRQ-------RKEKVDKEELKRRTLEMAVEYPD---- 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1063706111 202 dlsravpSLSPEGIDLLTQMLKYNPAERI-----SAKAALDHPYFDSLD 245
Cdd:cd05577   221 -------SFSPEARSLCEGLLQKDPERRLgcrggSADEVKEHPFFRSLN 262
STKc_ULK4 cd14010
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the ...
8-240 8.20e-23

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ULK4 is a functionally uncharacterized kinase that shows similarity to ATG1/ULKs. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. The ULK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270912 [Multi-domain]  Cd Length: 269  Bit Score: 93.51  E-value: 8.20e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGKLVALKKT----------RLEMDEEDSHR---------KGSN------------------ 50
Cdd:cd14010     6 DEIGRGKHSVVYKGRRKGTIEFVAIKCVdkskrpevlnEVRLTHELKHPnvlkfyewyETSNhlwlvveyctggdletll 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 --PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYTHEI--------- 119
Cdd:cd14010    86 rqDGNLPESSVRKFGRDLVRGLHYIHSKGIIYCDLKPSNILLD-GNGTLKLSDFGLARREGEILKELFGQFsdegnvnkv 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 120 -------VTLWYRAPEVLLGSTHySTAVDIWSVGCIFAEMIRRQALFPGDSeFQQLLHifRLLGTPTEqqwpgvmalrdw 192
Cdd:cd14010   165 skkqakrGTPYYMAPELFQGGVH-SFASDLWALGCVLYEMFTGKPPFVAES-FTELVE--KILNEDPP------------ 228
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 193 hvYPKwepqdlSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14010   229 --PPP------PKVSSKPSPDFKSLLKGLLEKDPAKRLSWDELVKHPF 268
STKc_Chk2 cd14084
Catalytic domain of the Serine/Threonine kinase, Cell cycle Checkpoint Kinase 2; STKs catalyze ...
2-240 8.76e-23

Catalytic domain of the Serine/Threonine kinase, Cell cycle Checkpoint Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Checkpoint Kinase 2 (Chk2) plays an important role in cellular responses to DNA double-strand breaks and related lesions. It is phosphorylated and activated by ATM kinase, resulting in its dissociation from sites of damage to phosphorylate downstream targets such as BRCA1, p53, cell cycle transcription factor E2F1, the promyelocytic leukemia protein (PML) involved in apoptosis, and CDC25 phosphatases, among others. Mutations in Chk2 is linked to a variety of cancers including familial breast cancer, myelodysplastic syndromes, prostate cancer, lung cancer, and osteosarcomas. Chk2 contains an N-terminal SQ/TQ cluster domain (SCD), a central forkhead-associated (FHA) domain, and a C-terminal catalytic kinase domain. The Chk2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270986 [Multi-domain]  Cd Length: 275  Bit Score: 93.61  E-value: 8.76e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEM----------------------------------DEEDS 44
Cdd:cd14084     6 KKYIMSRTLGSGACGEVKLAYDKSTCKKVAIKiinKRKFTIgsrreinkprnieteieilkklshpciikiedffDAEDD 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 H-------------RKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGILKIADLGLSRaFT 109
Cdd:cd14084    86 YyivlelmeggelfDRVVSNKRLKEAICKLYFYQMLLAVKYLHSNGIIHRDLKPENVLLssQEEECLIKITDFGLSK-IL 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 110 VPLKAYTHEIVTLWYRAPEVLL--GSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEfqqllhifrllGTPTEQQwpgVM 187
Cdd:cd14084   165 GETSLMKTLCGTPTYLAPEVLRsfGTEGYTRAVDCWSLGVILFICLSGYPPFSEEYT-----------QMSLKEQ---IL 230
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 188 ALRDWHVYPKWEpqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14084   231 SGKYTFIPKAWK---------NVSEEAKDLVKKMLVVDPSRRPSIEEALEHPW 274
PKc_Mps1 cd14131
Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle ...
4-240 9.95e-23

Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle 1 (also called TTK); Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TTK/Mps1 is a spindle checkpoint kinase that was first discovered due to its necessity in centrosome duplication in budding yeast. It was later found to function in the spindle assembly checkpoint, which monitors the proper attachment of chromosomes to the mitotic spindle. In yeast, substrates of Mps1 include the spindle pole body components Spc98p, Spc110p, and Spc42p. The TTK/Mps1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271033 [Multi-domain]  Cd Length: 271  Bit Score: 93.43  E-value: 9.95e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEkTTGKLVALKKTRL---------------------------------EMDEEDSH----- 45
Cdd:cd14131     3 YEILKQLGKGGSSKVYKVLN-PKKKIYALKRVDLegadeqtlqsykneiellkklkgsdriiqlydyEVTDEDDYlymvm 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 RKGS----------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdkDKGILKIADLGLSRAftvpLKAY 115
Cdd:cd14131    82 ECGEidlatilkkkRPKPIDPNFIRYYWKQMLEAVHTIHEEGIVHSDLKPANFLL--VKGRLKLIDFGIAKA----IQND 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIV------TLWYRAPEVLLGSTHY---------STAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHifrllgtpte 180
Cdd:cd14131   156 TTSIVrdsqvgTLNYMSPEAIKDTSASgegkpkskiGRPSDVWSLGCILYQMVYGKTPFQHITNPIAKLQ---------- 225
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 181 qqwpgvmALRDWHV---YPKWEPQDLsravpslspegIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14131   226 -------AIIDPNHeieFPDIPNPDL-----------IDVMKRCLQRDPKKRPSIPELLNHPF 270
STKc_ROCK_NDR_like cd05573
Catalytic domain of Rho-associated coiled-coil containing protein kinase (ROCK)- and Nuclear ...
2-245 1.01e-22

Catalytic domain of Rho-associated coiled-coil containing protein kinase (ROCK)- and Nuclear Dbf2-Related (NDR)-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. The ROCK/NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270725 [Multi-domain]  Cd Length: 350  Bit Score: 95.04  E-value: 1.01e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR----LEMD-------EEDSHRKGSNP------------------- 51
Cdd:cd05573     1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKILRksdmLKREqiahvraERDILADADSPwivrlhyafqdedhlylvm 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 ---------------RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLS----------- 105
Cdd:cd05573    81 eympggdlmnllikyDVFPEETARFYIAELVLALDSLHKLGFIHRDIKPDNILLDAD-GHIKLADFGLCtkmnksgdres 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 106 -----------------RAFTVPLKAYTHEIV-TLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSefqq 167
Cdd:cd05573   160 ylndsvntlfqdnvlarRRPHKQRRVRAYSAVgTPDYIAPEVLRG-TGYGPECDWWSLGVILYEMLYGFPPFYSDS---- 234
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063706111 168 llhifrLLGTpteqqWPGVMALRDWHVYPkwepqdlsrAVPSLSPEGIDLLTQMLKyNPAERI-SAKAALDHPYFDSLD 245
Cdd:cd05573   235 ------LVET-----YSKIMNWKESLVFP---------DDPDVSPEAIDLIRRLLC-DPEDRLgSAEEIKAHPFFKGID 292
STKc_PLK4 cd14186
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 4; STKs catalyze the ...
38-240 2.92e-22

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK4, also called SAK or STK18, is structurally different from other PLKs in that it contains only one polo box that can form two adjacent polo boxes and a functional PDB by homodimerization. It is required for late mitotic progression, cell survival, and embryonic development. It localizes to centrosomes and is required for centriole duplication and chromosomal stability. Overexpression of PLK4 may be associated with colon tumors. The PLK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271088 [Multi-domain]  Cd Length: 256  Bit Score: 91.85  E-value: 2.92e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  38 EMDEEDSHRKgsnpRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYTH 117
Cdd:cd14186    87 EMSRYLKNRK----KPFTEDEARHFMHQIVTGMLYLHSHGILHRDLTLSNLLLTRNMNI-KIADFGLATQLKMPHEKHFT 161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVLLGSTHySTAVDIWSVGCIFaemirrQALFPGDSEFQqllhifrllgTPTEQQWPGVMALRDWHVypk 197
Cdd:cd14186   162 MCGTPNYISPEIATRSAH-GLESDVWSLGCMF------YTLLVGRPPFD----------TDTVKNTLNKVVLADYEM--- 221
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 198 wePQDLSRavpslspEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14186   222 --PAFLSR-------EAQDLIHQLLRKNPADRLSLSSVLDHPF 255
PKc_MAPKK cd06605
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase ...
5-241 7.67e-22

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAPK, which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPKK kinase (MAPKKK or MKKK or MAP3K). There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270782 [Multi-domain]  Cd Length: 265  Bit Score: 90.87  E-value: 7.67e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   5 EKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE------------------------------------------ 42
Cdd:cd06605     4 EYLGELGEGNGGVVSKVRHRPSGQIMAVKVIRLEIDEAlqkqilreldvlhkcnspyivgfygafysegdisicmeymdg 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 ---DSHRKGSNPRPLEasLVQRFMFQLFKGVAHCHS-HGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPL-KAYTH 117
Cdd:cd06605    84 gslDKILKEVGRIPER--ILGKIAVAVVKGLIYLHEkHKIIHRDVKPSNILVNS-RGQVKLCDFGVSGQLVDSLaKTFVG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 eivTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMirrqAL--FPGDSefqqllhifrllgtPTEQQWPGVMALRDWHVy 195
Cdd:cd06605   161 ---TRSYMAPERISG-GKYTVKSDIWSLGLSLVEL----ATgrFPYPP--------------PNAKPSMMIFELLSYIV- 217
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 196 pKWEPQDLSRAVpsLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06605   218 -DEPPPLLPSGK--FSPDFQDFVSQCLQKDPTERPSYKELMEHPFI 260
STKc_MLCK cd14103
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase; STKs catalyze the ...
10-240 8.68e-22

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. In vertebrates, different MLCKs function in smooth (MLCK1), skeletal (MLCK2), and cardiac (MLCK3) muscles. A fourth protein, MLCK4, has also been identified through comprehensive genome analysis although it has not been biochemically characterized. The MLCK1 gene expresses three transcripts in a cell-specific manner: a short MLCK1 which contains three immunoglobulin (Ig)-like and one fibronectin type III (FN3) domains, PEVK and actin-binding regions, and a kinase domain near the C-terminus; a long MLCK1 containing six additional Ig-like domains at the N-terminus compared to the short MLCK1; and the C-terminal Ig module. MLCK2, MLCK3, and MLCK4 share a simpler domain architecture of a single kinase domain near the C-terminus and the absence of Ig-like or FN3 domains. The MLCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271005 [Multi-domain]  Cd Length: 250  Bit Score: 90.36  E-value: 8.68e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEEDSHRKGS------NPR----------PLEASLVQ----------- 60
Cdd:cd14103     1 LGRGKFGTVYRCVEKATGKELAAKfiKCRKAKDREDVRNEIEimnqlrHPRllqlydafetPREMVLVMeyvaggelfer 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 --------------RFMFQLFKGVAHCHSHGVLHRDLKPQNLL-LDKDKGILKIADLGLSRAF--TVPLKAY--THEIVt 121
Cdd:cd14103    81 vvdddfelterdciLFMRQICEGVQYMHKQGILHLDLKPENILcVSRTGNQIKIIDFGLARKYdpDKKLKVLfgTPEFV- 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 122 lwyrAPEVLlgstHY---STAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtpteqqwpgvmalrdwhvypKW 198
Cdd:cd14103   160 ----APEVV----NYepiSYATDMWSVGVICYVLLSGLSPFMGDNDAETLANVTRA----------------------KW 209
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 199 EPQDlsRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14103   210 DFDD--EAFDDISDEAKDFISKLLVKDPRKRMSAAQCLQHPW 249
STKc_NUAK2 cd14161
Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK 2; STKs ...
3-161 9.00e-22

Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NUAK proteins are classified as AMP-activated protein kinase (AMPK)-related kinases, which like AMPK are activated by the major tumor suppressor LKB1. Vertebrates contain two NUAK proteins, called NUAK1 and NUAK2. NUAK2, also called SNARK (Sucrose, non-fermenting 1/AMP-activated protein kinase-related kinase), is involved in energy metabolism. It is activated by hyperosmotic stress, DNA damage, and nutrients such as glucose and glutamine. NUAK2-knockout mice develop obesity, altered serum lipid profiles, hyperinsulinaemia, hyperglycaemia, and impaired glucose tolerance. NUAK2 is implicated in regulating actin stress fiber assembly through its association with myosin phosphatase Rho-interacting protein (MRIP), which leads to an increase in myosin regulatory light chain (MLC) phosphorylation. It is also associated with tumor growth, migration, and oncogenicity of melanoma cells. The NUAK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271063 [Multi-domain]  Cd Length: 255  Bit Score: 90.78  E-value: 9.00e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTtGKLVALKKTRLEM--DEED--------------SH--------------------- 45
Cdd:cd14161     4 RYEFLETLGKGTYGRVKKARDSS-GRLVAIKSIRKDRikDEQDllhirreieimsslNHphiisvyevfensskivivme 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 --RKG------SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVP--LKAY 115
Cdd:cd14161    83 yaSRGdlydyiSERQRLSELEARHFFRQIVSAVHYCHANGIVHRDLKLENILLDANGNI-KIADFGLSNLYNQDkfLQTY 161
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 116 THEIVtlwYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPG 161
Cdd:cd14161   162 CGSPL---YASPEIVNGRPYIGPEVDSWSLGVLLYILVHGTMPFDG 204
STKc_RCK1-like cd14096
Catalytic domain of RCK1-like Serine/Threonine Kinases; STKs catalyze the transfer of the ...
2-240 1.06e-21

Catalytic domain of RCK1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of fungal STKs including Saccharomyces cerevisiae RCK1 and RCK2, Schizosaccharomyces pombe Sty1-regulated kinase 1 (Srk1), and similar proteins. RCK1, RCK2 (or Rck2p), and Srk1 are MAPK-activated protein kinases. RCK1 and RCK2 are involved in oxidative and metal stress resistance in budding yeast. RCK2 also regulates rapamycin sensitivity in both S. cerevisiae and Candida albicans. Srk1 is activated by Sty1/Spc1 and is involved in negatively regulating cell cycle progression by inhibiting Cdc25. The RCK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270998 [Multi-domain]  Cd Length: 295  Bit Score: 91.34  E-value: 1.06e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAM-EKTTGKLVALKKTRLE---------------MDEEDSHRKGSNPRPLE---------- 55
Cdd:cd14096     1 ENYRLINKIGEGAFSNVYKAVpLRNTGKPVAIKVVRKAdlssdnlkgssraniLKEVQIMKRLSHPNIVKlldfqesdey 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  56 ASLVQ-----------------------RFMF-QLFKGVAHCHSHGVLHRDLKPQNLLL-----------------DKDK 94
Cdd:cd14096    81 YYIVLeladggeifhqivrltyfsedlsRHVItQVASAVKYLHEIGVVHRDIKPENLLFepipfipsivklrkaddDETK 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  95 ---------------GILKIADLGLSRAFTvPLKAYThEIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALF 159
Cdd:cd14096   161 vdegefipgvggggiGIVKLADFGLSKQVW-DSNTKT-PCGTVGYTAPEV-VKDERYSKKVDMWALGCVLYTLLCGFPPF 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 160 PGDSEFQQLLHIFRllGTPTeqqwpgvmALRDWhvypkWEpqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHP 239
Cdd:cd14096   238 YDESIETLTEKISR--GDYT--------FLSPW-----WD---------EISKSAKDLISHLLTVDPAKRYDIDEFLAHP 293

                  .
gi 1063706111 240 Y 240
Cdd:cd14096   294 W 294
STKc_IRE1 cd13982
Catalytic domain of the Serine/Threonine kinase, Inositol-requiring protein 1; STKs catalyze ...
61-241 1.67e-21

Catalytic domain of the Serine/Threonine kinase, Inositol-requiring protein 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRE1, also called Endoplasmic reticulum (ER)-to-nucleus signaling protein (or ERN), is an ER-localized type I transmembrane protein with kinase and endoribonuclease domains in the cytoplasmic side. It acts as an ER stress sensor and is the oldest and most conserved component of the unfolded protein response (UPR) in eukaryotes. The UPR is activated when protein misfolding is detected in the ER in order to decrease the synthesis of new proteins and increase the capacity of the ER to cope with the stress. During ER stress, IRE1 dimerizes and forms oligomers, allowing the kinase domain to undergo trans-autophosphorylation. This leads to a conformational change that stimulates its endoribonuclease activity and results in the cleavage of its mRNA substrate, HAC1 in yeast and XBP1 in metazoans, promoting a splicing event that enables translation into a transcription factor which activates the UPR. Mammals contain two IRE1 proteins, IRE1alpha (or ERN1) and IRE1beta (or ERN2). The Ire1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270884 [Multi-domain]  Cd Length: 269  Bit Score: 90.02  E-value: 1.67e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKD----KGILKIADLGLSRAFTV---PLKAYTHEIVTLWYRAPEVLLGS 133
Cdd:cd13982   103 RLLRQIASGLAHLHSLNIVHRDLKPQNILISTPnahgNVRAMISDFGLCKKLDVgrsSFSRRSGVAGTSGWIAPEMLSGS 182
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 134 THY--STAVDIWSVGCIFAEMIrRQALFPGDSEFQQLLHIFRllgtpteqqwpgvmalrdwHVYPKWEPQDLSravpSLS 211
Cdd:cd13982   183 TKRrqTRAVDIFSLGCVFYYVL-SGGSHPFGDKLEREANILK-------------------GKYSLDKLLSLG----EHG 238
                         170       180       190
                  ....*....|....*....|....*....|
gi 1063706111 212 PEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd13982   239 PEAQDLIERMIDFDPEKRPSAEEVLNHPFF 268
STKc_Yank1 cd05578
Catalytic domain of the Serine/Threonine Kinase, Yank1; STKs catalyze the transfer of the ...
4-241 2.27e-21

Catalytic domain of the Serine/Threonine Kinase, Yank1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily contains uncharacterized STKs with similarity to the human protein designated as Yank1 or STK32A. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270730 [Multi-domain]  Cd Length: 257  Bit Score: 89.62  E-value: 2.27e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKK----------------------TRLE-----------MDEED------- 43
Cdd:cd05578     2 FQILRVIGKGSFGKVCIVQKKDTKKMFAMKYmnkqkciekdsvrnvlneleilQELEhpflvnlwysfQDEEDmymvvdl 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 ----------SHRkgsnpRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLK 113
Cdd:cd05578    82 llggdlryhlQQK-----VKFSEETVKFYICEIVLALDYLHSKNIIHRDIKPDNILLDE-QGHVHITDFNIATKLTDGTL 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AyTHEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEF--QQLLHIFrllgtptEQQWPgvmalrd 191
Cdd:cd05578   156 A-TSTSGTKPYMAPEVFMRAG-YSFAVDWWSLGVTAYEMLRGKRPYEIHSRTsiEEIRAKF-------ETASV------- 219
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 192 whVYPkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISA-KAALDHPYF 241
Cdd:cd05578   220 --LYP-----------AGWSEEAIDLINKLLERDPQKRLGDlSDLKNHPYF 257
STKc_SLK_like cd06611
Catalytic domain of Ste20-Like Kinase-like Serine/Threonine Kinases; STKs catalyze the ...
2-246 2.86e-21

Catalytic domain of Ste20-Like Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of the subfamily include SLK, STK10 (also called LOK for Lymphocyte-Oriented Kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132942 [Multi-domain]  Cd Length: 280  Bit Score: 89.80  E-value: 2.86e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDS-------------HRKGSN------------------ 50
Cdd:cd06611     5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEdfmveidilseckHPNIVGlyeayfyenklwiliefc 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 ------------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd06611    85 dggaldsimlelERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLD-GDVKLADFGVSAKNKSTLQKRDTF 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVTLWYRAPEVLLGSTH----YSTAVDIWSVGCIFAEMIRRQalfPGDSEfqqlLHIFRLLgtpteqqwpgvmaLRdwhv 194
Cdd:cd06611   164 IGTPYWMAPEVVACETFkdnpYDYKADIWSLGITLIELAQME---PPHHE----LNPMRVL-------------LK---- 219
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 195 YPKWEPQDLSRavPSL-SPEGIDLLTQMLKYNPAERISAKAALDHPYFDSLDK 246
Cdd:cd06611   220 ILKSEPPTLDQ--PSKwSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSD 270
STKc_HIPK cd14211
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase; STKs ...
4-240 5.27e-21

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). They show speckled localization in the nucleus, apart from the nucleoles. They play roles in the regulation of many nuclear pathways including gene transcription, cell survival, proliferation, differentiation, development, and DNA damage response. Vertebrates contain three HIPKs (HIPK1-3) and mammals harbor an additional family member HIPK4, which does not contain a homeobox-interacting domain and is localized in the cytoplasm. HIPK2, the most studied HIPK, is a coregulator of many transcription factors and cofactors and it regulates gene transcription during development and in DNA damage response. The HIPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271113 [Multi-domain]  Cd Length: 329  Bit Score: 89.82  E-value: 5.27e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK------------------KTRLEMDEEDSHR------------------- 46
Cdd:cd14211     1 YEVLEFLGRGTFGQVVKCWKRGTNEIVAIKilknhpsyarqgqievsiLSRLSQENADEFNfvrayecfqhknhtclvfe 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ----------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL---DKDKGILKIADLGLSRAFTVPLK 113
Cdd:cd14211    81 mleqnlydflKQNKFSPLPLKYIRPILQQVLTALLKLKSLGLIHADLKPENIMLvdpVRQPYRVKVIDFGSASHVSKAVC 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AyTHeIVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMA----- 188
Cdd:cd14211   161 S-TY-LQSRYYRAPEIILG-LPFCEAIDMWSLGCVIAELFLGWPLYPGSSEYDQIRYISQTQGLPAEHLLNAATKtsrff 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 189 LRDWH-VYPKWEPQ-------------------------DLSRA-VPSLSP------------EGIDLLTQMLKYNPAER 229
Cdd:cd14211   238 NRDPDsPYPLWRLKtpeeheaetgikskearkyifncldDMAQVnGPSDLEgsellaekadrrEFIDLLKRMLTIDQERR 317
                         330
                  ....*....|.
gi 1063706111 230 ISAKAALDHPY 240
Cdd:cd14211   318 ITPGEALNHPF 328
STKc_cGK cd05572
Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG); ...
74-245 6.66e-21

Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270724 [Multi-domain]  Cd Length: 262  Bit Score: 88.44  E-value: 6.66e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHeIVTLWYRAPEVLLGStHYSTAVDIWSVGCIFAEMI 153
Cdd:cd05572   110 HSRGIIYRDLKPENLLLDS-NGYVKLVDFGFAKKLGSGRKTWTF-CGTPEYVAPEIILNK-GYDFSVDYWSLGILLYELL 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 154 RRQALFPGDSEFQqlLHIFRLLGTPTEQqwpgvmalrdwHVYPKWepqdlsravpsLSPEGIDLLTQMLKYNPAERI--- 230
Cdd:cd05572   187 TGRPPFGGDDEDP--MKIYNIILKGIDK-----------IEFPKY-----------IDKNAKNLIKQLLRRNPEERLgyl 242
                         170
                  ....*....|....*..
gi 1063706111 231 --SAKAALDHPYFDSLD 245
Cdd:cd05572   243 kgGIRDIKKHKWFEGFD 259
PKc_Wee1_like cd13997
Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the ...
4-239 9.21e-21

Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity kinase Myt1, the protein tyrosine kinase Wee1, and similar proteins. These proteins are cell cycle checkpoint kinases that are involved in the regulation of cyclin-dependent kinase CDK1, the master engine for mitosis. CDK1 is kept inactivated through phosphorylation of N-terminal thr (T14 by Myt1) and tyr (Y15 by Myt1 and Wee1) residues. Mitosis progression is ensured through activation of CDK1 by dephoshorylation and inactivation of Myt1/Wee1. The Wee1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270899 [Multi-domain]  Cd Length: 252  Bit Score: 87.82  E-value: 9.21e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKT----RLEMD---------------------------EEDSH------- 45
Cdd:cd13997     2 FHELEQIGSGSFSEVFKVRSKVDGCLYAVKKSkkpfRGPKEraralreveahaalgqhpnivryysswEEGGHlyiqmel 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 -RKGSNPRPLEAS---------LVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLsraftvplkAY 115
Cdd:cd13997    82 cENGSLQDALEELspisklseaEVWDLLLQVALGLAFIHSKGIVHLDIKPDNIFISN-KGTCKIGDFGL---------AT 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVTLW------YRAPEVLLGSTHYSTAVDIWSVGCIFAEMIrrqalfpGDSEFqqllhifrllgtPTEQQWpgvmal 189
Cdd:cd13997   152 RLETSGDVeegdsrYLAPELLNENYTHLPKADIFSLGVTVYEAA-------TGEPL------------PRNGQQ------ 206
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 190 rdWHVYPKWEPQDLSRavPSLSPEGIDLLTQMLKYNPAERISAKAALDHP 239
Cdd:cd13997   207 --WQQLRQGKLPLPPG--LVLSQELTRLLKVMLDPDPTRRPTADQLLAHD 252
STKc_Nek8 cd08220
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
3-239 1.48e-20

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Nek8 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270859 [Multi-domain]  Cd Length: 256  Bit Score: 87.48  E-value: 1.48e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE-------------------------------------------- 38
Cdd:cd08220     1 KYEKIRVVGRGAYGTVYLCRRKDDNKLVIIKQIPVEqmtkeerqaalnevkvlsmlhhpniieyyesfledkalmivmey 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  39 -----MDEEDSHRKGSnprPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLK 113
Cdd:cd08220    81 apggtLFEYIQQRKGS---LLSEEEILHFFVQILLALHHVHSKQILHRDLKTQNILLNKKRTVVKIGDFGISKILSSKSK 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYThEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWpgvmalrdwh 193
Cdd:cd08220   158 AYT-VVGTPCYISPELCEGKP-YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMRGTFAPISDRY---------- 225
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 194 vypkwepqdlsravpslSPEGIDLLTQMLKYNPAERISAKAALDHP 239
Cdd:cd08220   226 -----------------SEELRHLILSMLHLDPNKRPTLSEIMAQP 254
STKc_DRAK1 cd14197
Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
59-241 1.52e-20

Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 (also called STK17A) and DRAK2. Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. Rabbit DRAK1 has been shown to induce apoptosis in osteoclasts and overexpressio of human DRAK1 induces apoptosis in cultured fibroblast cells. DRAK1 may be involved in apoptotic signaling. The DRAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271099 [Multi-domain]  Cd Length: 271  Bit Score: 87.68  E-value: 1.52e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDK--GILKIADLGLSRafTVPLKAYTHEIV-TLWYRAPEVlLGSTH 135
Cdd:cd14197   113 VKRLMKQILEGVSFLHNNNVVHLDLKPQNILLTSESplGDIKIVDFGLSR--ILKNSEELREIMgTPEYVAPEI-LSYEP 189
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 136 YSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGvmalrdwhvypkwepqdlsravpsLSPEGI 215
Cdd:cd14197   190 ISTATDMWSIGVLAYVMLTGISPFLGDDKQETFLNISQMNVSYSEEEFEH------------------------LSESAI 245
                         170       180
                  ....*....|....*....|....*.
gi 1063706111 216 DLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14197   246 DFIKTLLIKKPENRATAEDCLKHPWL 271
STKc_Aurora-A cd14116
Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer ...
1-240 1.74e-20

Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2, which also localizes the kinase to spindle microtubules. Aurora-A is overexpressed in many cancer types such as prostate, ovarian, breast, bladder, gastric, and pancreatic. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271018 [Multi-domain]  Cd Length: 258  Bit Score: 87.32  E-value: 1.74e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMD----------EEDSHRKGSN----------------- 50
Cdd:cd14116     4 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKvlfKAQLEKAgvehqlrrevEIQSHLRHPNilrlygyfhdatrvyli 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 ----PRPLEASLVQR-----------FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSraFTVPLKAY 115
Cdd:cd14116    84 leyaPLGTVYRELQKlskfdeqrtatYITELANALSYCHSKRVIHRDIKPENLLLGSA-GELKIADFGWS--VHAPSSRR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVTLWYRAPEVLLGSTHySTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtptEQQWPgvmalrdwhvy 195
Cdd:cd14116   161 TTLCGTLDYLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----EFTFP----------- 223
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 196 pkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14116   224 ------------DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
STKc_MELK cd14078
Catalytic domain of the Serine/Threonine Kinase, Maternal Embryonic Leucine zipper Kinase; ...
2-240 2.13e-20

Catalytic domain of the Serine/Threonine Kinase, Maternal Embryonic Leucine zipper Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MELK is a cell cycle dependent protein which functions in cytokinesis, cell cycle, apoptosis, cell proliferation, and mRNA processing. It is found upregulated in many types of cancer cells, playing an indispensable role in cancer cell survival. It makes an attractive target in the design of inhibitors for use in the treatment of a wide range of human cancer. The MELK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270980 [Multi-domain]  Cd Length: 257  Bit Score: 87.05  E-value: 2.13e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK------------KTRLEMD-----------------EEDSH------- 45
Cdd:cd14078     3 KYYELHETIGSGGFAKVKLATHILTGEKVAIKimdkkalgddlpRVKTEIEalknlshqhicrlyhviETDNKifmvley 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 -----------RKGSnprpLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSRAftvPLKA 114
Cdd:cd14078    83 cpggelfdyivAKDR----LSEDEARVFFRQIVSAVAYVHSQGYAHRDLKPENLLLDEDQN-LKLIDFGLCAK---PKGG 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YTHEIVT----LWYRAPEVLLGSTHYSTAVDIWSVGCI-FAEMIrrqALFPGDSEFQQLLhiFRLLgtpteqqwpgvmaL 189
Cdd:cd14078   155 MDHHLETccgsPAYAAPELIQGKPYIGSEADVWSMGVLlYALLC---GFLPFDDDNVMAL--YRKI-------------Q 216
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 190 RDWHVYPKWepqdlsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14078   217 SGKYEEPEW-----------LSPSSKLLLDQMLQVDPKKRITVKELLNHPW 256
STKc_FA2-like cd08529
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar ...
4-239 2.68e-20

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily contains FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270868 [Multi-domain]  Cd Length: 256  Bit Score: 86.70  E-value: 2.68e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE-----MDEEDSHR-------------------------------- 46
Cdd:cd08529     2 FEILNKLGKGSFGVVYKVVRKVDGRVYALKQIDISrmsrkMREEAIDEarvlsklnspyvikyydsfvdkgklnivmeya 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ---------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTvPLKAYTH 117
Cdd:cd08529    82 engdlhsliKSQRGRPLPEDQIWKFFIQTLLGLSHLHSKKILHRDIKSMNIFLDKGDNV-KIGDLGVAKILS-DTTNFAQ 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIV-TLWYRAPEvLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRllgtpteqqwpgvmalrdwhvyP 196
Cdd:cd08529   160 TIVgTPYYLSPE-LCEDKPYNEKSDVWALGCVLYELCTGKHPFEAQNQGALILKIVR----------------------G 216
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 197 KWEPqdlsraVP-SLSPEGIDLLTQMLKYNPAERISAKAALDHP 239
Cdd:cd08529   217 KYPP------ISaSYSQDLSQLIDSCLTKDYRQRPDTTELLRNP 254
STKc_MEKK1 cd06630
Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP) ...
53-241 3.76e-20

Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK1 is a MAPK kinase kinase (MAPKKK or MKKK) that phosphorylates and activates activates the ERK1/2 and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270800 [Multi-domain]  Cd Length: 268  Bit Score: 86.71  E-value: 3.76e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKA---YTHEIV-TLWYRAPE 128
Cdd:cd06630    99 AFSENVIINYTLQILRGLAYLHDNQIIHRDLKGANLLVDSTGQRLRIADFGAAARLASKGTGageFQGQLLgTIAFMAPE 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 129 VLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtPTEQQWPGVmalrdwhvypkwePQdlsravp 208
Cdd:cd06630   179 VLRGEQ-YGRSCDVWSVGCVIIEMATAKPPWNAEKISNHLALIFKI---ASATTPPPI-------------PE------- 234
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1063706111 209 SLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06630   235 HLSPGLRDVTLRCLELQPEDRPPARELLKHPVF 267
STKc_STK10 cd06644
Catalytic domain of the Serine/Threonine Kinase, STK10 (also called Lymphocyte-Oriented Kinase ...
2-244 3.92e-20

Catalytic domain of the Serine/Threonine Kinase, STK10 (also called Lymphocyte-Oriented Kinase or LOK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK10/LOK is also called polo-like kinase kinase 1 in Xenopus (xPlkk1). It is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132975 [Multi-domain]  Cd Length: 292  Bit Score: 87.01  E-value: 3.92e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEEDSHRK----GSNPRPLEASLVQRFMF----------- 64
Cdd:cd06644    12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKviETKSEEELEDYMVEieilATCNHPYIVKLLGAFYWdgklwimiefc 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 --------------------------QLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd06644    92 pggavdaimleldrgltepqiqvicrQMLEALQYLHSMKIIHRDLKAGNVLLTLD-GDIKLADFGVSAKNVKTLQRRDSF 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVTLWYRAPEVLLGSTH----YSTAVDIWSVGCIFAEMIRRQalfPGDSEfqqlLHIFRLLGTPTEQQWPGVMALRDWhv 194
Cdd:cd06644   171 IGTPYWMAPEVVMCETMkdtpYDYKADIWSLGITLIEMAQIE---PPHHE----LNPMRVLLKIAKSEPPTLSQPSKW-- 241
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 195 ypkwepqdlsravpslSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:cd06644   242 ----------------SMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV 275
STKc_MLCK-like cd14006
Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs ...
11-240 8.42e-20

Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This family is composed of MLCKs and related MLCK-like kinase domains from giant STKs such as titin, obscurin, SPEG, Unc-89, Trio, kalirin, and Twitchin. Also included in this family are Death-Associated Protein Kinases (DAPKs) and Death-associated protein kinase-Related Apoptosis-inducing protein Kinase (DRAKs). MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. Titin, obscurin, Twitchin, and SPEG are muscle proteins involved in the contractile apparatus. The giant STKs are multidomain proteins containing immunoglobulin (Ig), fibronectin type III (FN3), SH3, RhoGEF, PH and kinase domains. Titin, obscurin, Twitchin, and SPEG contain many Ig domain repeats at the N-terminus, while Trio and Kalirin contain spectrin-like repeats. The MLCK-like family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270908 [Multi-domain]  Cd Length: 247  Bit Score: 85.01  E-value: 8.42e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  11 GEGTYGKVYKAMEKTTGKLVALK--KTRLE-----MDEEDSHRKGSNPR----------PLEASL--------------- 58
Cdd:cd14006     2 GRGRFGVVKRCIEKATGREFAAKfiPKRDKkkeavLREISILNQLQHPRiiqlheayesPTELVLilelcsggelldrla 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 ---------VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGLSRAFTvPLKAYTHEIVTLWYRAPE 128
Cdd:cd14006    82 ergslseeeVRTYMRQLLEGLQYLHNHHILHLDLKPENILLaDRPSPQIKIIDFGLARKLN-PGEELKEIFGTPEFVAPE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 129 VLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrllgtpTEQQWpgvmalrdwhvypkwepqDLSR-AV 207
Cdd:cd14006   161 IVNGEP-VSLATDMWSIGVLTYVLLSGLSPFLGEDDQETLANI-------SACRV------------------DFSEeYF 214
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1063706111 208 PSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14006   215 SSVSQEAKDFIRKLLVKEPRKRPTAQEALQHPW 247
PKc_Myt1 cd14050
Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze ...
4-239 1.54e-19

Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. Myt1 is a cytoplasmic cell cycle checkpoint kinase that can keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of N-terminal thr (T14) and tyr (Y15) residues, leading to the delay of meiosis I entry. Meiotic progression is ensured by a two-step inhibition and downregulation of Myt1 by CDK1/XRINGO and p90Rsk during oocyte maturation. In addition, Myt1 targets cyclin B1/B2 and is essential for Golgi and ER assembly during telophase. In Drosophila, Myt1 may be a downstream target of Notch during eye development. The Myt1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270952 [Multi-domain]  Cd Length: 249  Bit Score: 84.67  E-value: 1.54e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR-LEMDEEDSHRK----------GSNPRPLE----------------- 55
Cdd:cd14050     3 FTILSKLGEGSFGEVFKVRSREDGKLYAVKRSRsRFRGEKDRKRKleeverheklGEHPNCVRfikaweekgilyiqtel 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  56 --ASLVQ--------------RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLsrafTVPL-KAYTHE 118
Cdd:cd14050    83 cdTSLQQyceethslpesevwNILLDLLKGLKHLHDHGLIHLDIKPANIFLSKD-GVCKLGDFGL----VVELdKEDIHD 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVT--LWYRAPEVLLGstHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQllhifrllgtpteqqwpgvmaLRDWHVyp 196
Cdd:cd14050   158 AQEgdPRYMAPELLQG--SFTKAADIFSLGITILELACNLELPSGGDGWHQ---------------------LRQGYL-- 212
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 197 kwePQDLsraVPSLSPEGIDLLTQMLKYNPAERISAKAALDHP 239
Cdd:cd14050   213 ---PEEF---TAGLSPELRSIIKLMMDPDPERRPTAEDLLALP 249
STKc_Nek5 cd08225
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
3-241 2.28e-19

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Nek5 is one in a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173765 [Multi-domain]  Cd Length: 257  Bit Score: 84.24  E-value: 2.28e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKK---TRLEMDEEDSHR---------KGSNPRPLEAS------------- 57
Cdd:cd08225     1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEidlTKMPVKEKEASKkevillakmKHPNIVTFFASfqengrlfivmey 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  58 -----LVQRF------MF----------QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLK-AY 115
Cdd:cd08225    81 cdggdLMKRInrqrgvLFsedqilswfvQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMElAY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THeIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSeFQQLlhifrllgtpteqqwpgVMALRDWHVY 195
Cdd:cd08225   161 TC-VGTPYYLSPEI-CQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-LHQL-----------------VLKICQGYFA 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 196 PkwepqdlsrAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd08225   221 P---------ISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257
STKc_HIPK3 cd14229
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 3; ...
4-181 2.47e-19

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPK3 is a Fas-interacting protein that induces FADD (Fas-associated death domain) phosphorylation and mediates FasL-induced JNK activation. Overexpression of HIPK3 does not affect cell death, however its expression in prostate cancer cells contributes to increased resistance to Fas receptor-mediated apoptosis. HIPK3 also plays a role in regulating steroidogenic gene expression. In response to cAMP, HIPK3 activates the phosphorylation of JNK and c-Jun, leading to increased activity of the transcription factor SF-1 (Steroidogenic factor 1), a key regulator for steroid biosynthesis in the gonad and adrenal gland. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). The HIPK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 271131 [Multi-domain]  Cd Length: 330  Bit Score: 85.47  E-value: 2.47e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK------------------KTRLEMDEEDSHR------------------- 46
Cdd:cd14229     2 YEVLDFLGRGTFGQVVKCWKRGTNEIVAVKilknhpsyarqgqievgiLARLSNENADEFNfvrayecfqhrnhtclvfe 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ----------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGLSRAFTVPLKAY 115
Cdd:cd14229    82 mleqnlydflKQNKFSPLPLKVIRPILQQVATALKKLKSLGLIHADLKPENIMLvDPVRQPYRVKVIDFGSASHVSKTVC 161
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 116 THEIVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQ 181
Cdd:cd14229   162 STYLQSRYYRAPEIILG-LPFCEAIDMWSLGCVIAELFLGWPLYPGALEYDQIRYISQTQGLPGEQ 226
STKc_myosinIII_N_like cd06608
N-terminal Catalytic domain of Class III myosin-like Serine/Threonine Kinases; STKs catalyze ...
2-152 2.59e-19

N-terminal Catalytic domain of Class III myosin-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), and mitogen-activated protein kinase (MAPK) kinase kinase kinase 4/6. MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270785 [Multi-domain]  Cd Length: 275  Bit Score: 84.28  E-value: 2.59e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED-------------SHRK--------------------- 47
Cdd:cd06608     6 GIFELVEVIGEGTYGKVYKARHKKTGQLAAIKIMDIIEDEEEeikleinilrkfsNHPNiatfygafikkdppggddqlw 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 --------GS----------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFT 109
Cdd:cd06608    86 lvmeycggGSvtdlvkglrkKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTEEAEV-KLVDFGVSAQLD 164
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 110 VPLKAYTHEIVTLWYRAPEVLLGS----THYSTAVDIWSVGCIFAEM 152
Cdd:cd06608   165 STLGRRNTFIGTPYWMAPEVIACDqqpdASYDARCDVWSLGITAIEL 211
STKc_SLK cd06643
Catalytic domain of the Serine/Threonine Kinase, Ste20-Like Kinase; STKs catalyze the transfer ...
2-248 3.83e-19

Catalytic domain of the Serine/Threonine Kinase, Ste20-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270811 [Multi-domain]  Cd Length: 283  Bit Score: 83.92  E-value: 3.83e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE-----------------------DSHRKGSN-------- 50
Cdd:cd06643     5 DFWEIVGELGDGAFGKVYKAQNKETGILAAAKVIDTKSEEEledymveidilascdhpnivkllDAFYYENNlwiliefc 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 ------------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd06643    85 aggavdavmlelERPLTEPQIRVVCKQTLEALVYLHENKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTLQRRDSF 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVTLWYRAPEVLLGSTH----YSTAVDIWSVGCIFAEMIRRQalfPGDSEFQQLLHIFRLlgtpteqqwpgvmalrdwhv 194
Cdd:cd06643   164 IGTPYWMAPEVVMCETSkdrpYDYKADVWSLGVTLIEMAQIE---PPHHELNPMRVLLKI-------------------- 220
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 195 yPKWEPQDLsrAVPS-LSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSLDKSQ 248
Cdd:cd06643   221 -AKSEPPTL--AQPSrWSPEFKDFLRKCLEKNVDARWTTSQLLQHPFVSVLVSNK 272
PKc_CLK3 cd14214
Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 3; Dual-specificity ...
2-241 4.29e-19

Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 3; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. CLK3 is predominantly expressed in mature spermatozoa, and might play a role in the fertilization process. CLKs are involved in the phosphorylation and regulation of serine/arginine-rich (SR) proteins, which play a crucial role in pre-mRNA splicing by directing splice site selection. SR proteins are phosphorylated first by SR protein kinases (SRPKs) at the N-terminus, which leads to its assembly into nuclear speckles where splicing factors are stored. CLKs phosphorylate the C-terminal part of SR proteins, causing the nuclear speckles to dissolve and splicing factors to be recruited at sites of active transcription. Based on a conserved "EHLAMMERILG" signature motif which may be crucial for substrate specificity, CLKs are also referred to as LAMMER kinases. CLKs autophosphorylate at tyrosine residues and phosphorylate their substrates exclusively on serine/threonine residues. The CLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271116 [Multi-domain]  Cd Length: 331  Bit Score: 84.68  E-value: 4.29e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGK-LVALK----------KTRLEMD------EEDSHRK----------------- 47
Cdd:cd14214    13 ERYEIVGDLGEGTFGKVVECLDHARGKsQVALKiirnvgkyreAARLEINvlkkikEKDKENKflcvlmsdwfnfhghmc 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 ------GSN-----------PRPLEAslVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLD--------------KDKGI 96
Cdd:cd14214    93 iafellGKNtfeflkennfqPYPLPH--IRHMAYQLCHALKFLHENQLTHTDLKPENILFVnsefdtlyneskscEEKSV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  97 ----LKIADLGlsrAFTVPLKAYTHEIVTLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIF 172
Cdd:cd14214   171 kntsIRVADFG---SATFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSLGCILFEYYRGFTLFQTHENREHLVMME 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 173 RLLGT-------PTEQQ---------W-----PGVMALRDWHVYPKWEPQDlsravpslSPEGI---DLLTQMLKYNPAE 228
Cdd:cd14214   247 KILGPipshmihRTRKQkyfykgslvWdenssDGRYVSENCKPLMSYMLGD--------SLEHTqlfDLLRRMLEFDPAL 318
                         330
                  ....*....|...
gi 1063706111 229 RISAKAALDHPYF 241
Cdd:cd14214   319 RITLKEALLHPFF 331
STKc_LKB1 cd14119
Catalytic domain of the Serine/Threonine kinase, Liver Kinase B1; STKs catalyze the transfer ...
11-241 5.76e-19

Catalytic domain of the Serine/Threonine kinase, Liver Kinase B1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LKB1, also called STK11, was first identified as a tumor suppressor responsible for Peutz-Jeghers syndrome, a disorder that leads to an increased risk of spontaneous epithelial cancer. It serves as a master upstream kinase that activates AMP-activated protein kinase (AMPK) and most AMPK-like kinases. LKB1 and AMPK are part of an energy-sensing pathway that links cell energy to metabolism and cell growth. They play critical roles in the establishment and maintenance of cell polarity, cell proliferation, cytoskeletal organization, as well as T-cell metabolism, including T-cell development, homeostasis, and effector function. To be activated, LKB1 requires the adaptor proteins STe20-Related ADaptor (STRAD) and mouse protein 25 (MO25). The LKB1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271021 [Multi-domain]  Cd Length: 255  Bit Score: 83.08  E-value: 5.76e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  11 GEGTYGKVYKAMEKTTGKLVA---LKKTRL------------EM---------------DEEDSHRK-----------GS 49
Cdd:cd14119     2 GEGSYGKVKEVLDTETLCRRAvkiLKKRKLrripngeanvkrEIqilrrlnhrnviklvDVLYNEEKqklymvmeycvGG 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 NPRPLEASLVQRF--------MFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAftvpLKAYTHEIV- 120
Cdd:cd14119    82 LQEMLDSAPDKRLpiwqahgyFVQLIDGLEYLHSQGIIHKDIKPGNLLLTTD-GTLKISDFGVAEA----LDLFAEDDTc 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 -----TLWYRAPEVLLGSTHYS-TAVDIWSVGCIFAEMIRRQALFPGDSefqqllhIFRLLGTPTEQQWpgvmalrdwhV 194
Cdd:cd14119   157 ttsqgSPAFQPPEIANGQDSFSgFKVDIWSAGVTLYNMTTGKYPFEGDN-------IYKLFENIGKGEY----------T 219
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 195 YPKWEPQDLSravpslspegiDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14119   220 IPDDVDPDLQ-----------DLLRGMLEKDPEKRFTIEQIRQHPWF 255
STKc_GRK4_like cd05605
Catalytic domain of G protein-coupled Receptor Kinase 4-like Serine/Threonine Kinases; STKs ...
69-245 6.34e-19

Catalytic domain of G protein-coupled Receptor Kinase 4-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. They contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK4-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270756 [Multi-domain]  Cd Length: 285  Bit Score: 83.56  E-value: 6.34e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLsrAFTVPLKAYTHEIV-TLWYRAPEVlLGSTHYSTAVDIWSVGC 147
Cdd:cd05605   114 GLEHLHSERIVYRDLKPENILLD-DHGHVRISDLGL--AVEIPEGETIRGRVgTVGYMAPEV-VKNERYTFSPDWWGLGC 189
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 148 IFAEMIRRQALFPGDSEFQQLLHIFRLLgtpteqqwpgvmalrdwhvypKWEPQDLSRavpSLSPEGIDLLTQMLKYNPA 227
Cdd:cd05605   190 LIYEMIEGQAPFRARKEKVKREEVDRRV---------------------KEDQEEYSE---KFSEEAKSICSQLLQKDPK 245
                         170       180
                  ....*....|....*....|...
gi 1063706111 228 ERI-----SAKAALDHPYFDSLD 245
Cdd:cd05605   246 TRLgcrgeGAEDVKSHPFFKSIN 268
STKc_PKB cd05571
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B; STKs catalyze the transfer ...
11-245 6.55e-19

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of phosphoinositide 3-kinase (PI3K) and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and PI3K.


Pssm-ID: 270723 [Multi-domain]  Cd Length: 322  Bit Score: 83.94  E-value: 6.55e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  11 GEGTYGKVYKAMEKTTGKLVA---LKKTRLEMDEEDSHRKGSN------PRPLEASLvqRFMFQ---------------- 65
Cdd:cd05571     4 GKGTFGKVILCREKATGELYAikiLKKEVIIAKDEVAHTLTENrvlqntRHPFLTSL--KYSFQtndrlcfvmeyvngge 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 LFKGVAHC----------------------HSHGVLHRDLKPQNLLLDKDkGILKIADLGLSR---AFTVPLKAY--THE 118
Cdd:cd05571    82 LFFHLSRErvfsedrtrfygaeivlalgylHSQGIVYRDLKLENLLLDKD-GHIKITDFGLCKeeiSYGATTKTFcgTPE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 ivtlwYRAPEVLLGSThYSTAVDIWSVGCIFAEMI-RRQALFPGDSEFqqllhIFRLLgtpteqqwpgvmaLRDWHVYPk 197
Cdd:cd05571   161 -----YLAPEVLEDND-YGRAVDWWGLGVVMYEMMcGRLPFYNRDHEV-----LFELI-------------LMEEVRFP- 215
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 198 wepqdlsravPSLSPEGIDLLTQMLKYNPAERI-----SAKAALDHPYFDSLD 245
Cdd:cd05571   216 ----------STLSPEAKSLLAGLLKKDPKKRLgggprDAKEIMEHPFFASIN 258
STKc_DCKL cd14095
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase (also called ...
3-240 7.14e-19

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase (also called Doublecortin-like and CAM kinase-like); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL (or DCAMKL) proteins belong to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL proteins contain a C-terminal kinase domain with similarity to CAMKs. They are involved in the regulation of cAMP signaling. Vertebrates contain three DCKL proteins (DCKL1-3); DCKL1 and 2 also contain a serine, threonine, and proline rich domain (SP), while DCKL3 contains only a single DCX domain instead of tandem domains. The DCKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270997 [Multi-domain]  Cd Length: 258  Bit Score: 82.76  E-value: 7.14e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRL---EM---DEEDSHRKGSNPR----------PLEASLV---- 59
Cdd:cd14095     1 KYDIGRVIGDGNFAVVKECRDKATDKEYALKiidKAKCkgkEHmieNEVAILRRVKHPNivqlieeydtDTELYLVmelv 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  60 --------------------QRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGI-LKIADLGLSRAFTVPLkaYT 116
Cdd:cd14095    81 kggdlfdaitsstkfterdaSRMVTDLAQALKYLHSLSIVHRDIKPENLLVveHEDGSKsLKLADFGLATEVKEPL--FT 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 heiV--TLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGtptEQQWPGvmalrdwhv 194
Cdd:cd14095   159 ---VcgTPTYVAPEI-LAETGYGLKVDIWAAGVITYILLCGFPPFRSPDRDQEELFDLILAG---EFEFLS--------- 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 195 yPKWEPqdlsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14095   223 -PYWDN---------ISDSAKDLISRMLVVDPEKRYSAGQVLDHPW 258
STKc_nPKC_theta_like cd05592
Catalytic domain of the Serine/Threonine Kinases, Novel Protein Kinase C theta, delta, and ...
69-245 1.17e-18

Catalytic domain of the Serine/Threonine Kinases, Novel Protein Kinase C theta, delta, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. The nPKC-theta-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270744 [Multi-domain]  Cd Length: 320  Bit Score: 83.20  E-value: 1.17e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGStHYSTAVDIWSVGCI 148
Cdd:cd05592   108 GLQFLHSRGIIYRDLKLDNVLLDRE-GHIKIADFGMCKENIYGENKASTFCGTPDYIAPEILKGQ-KYNQSVDWWSFGVL 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 149 FAEMIRRQALFPGDSEfQQLLHIFRllgtpteqqwpgvmalRDWHVYPKWepqdlsravpsLSPEGIDLLTQMLKYNPAE 228
Cdd:cd05592   186 LYEMLIGQSPFHGEDE-DELFWSIC----------------NDTPHYPRW-----------LTKEAASCLSLLLERNPEK 237
                         170       180
                  ....*....|....*....|..
gi 1063706111 229 RI-----SAKAALDHPYFDSLD 245
Cdd:cd05592   238 RLgvpecPAGDIRDHPFFKTID 259
STKc_PAK_I cd06647
Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase; STKs catalyze ...
2-241 1.79e-18

Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270814 [Multi-domain]  Cd Length: 261  Bit Score: 81.90  E-value: 1.79e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK--------KTRLEMDEEDSHRKGSNPRP---LEASLVQRFMF------ 64
Cdd:cd06647     7 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKqmnlqqqpKKELIINEILVMRENKNPNIvnyLDSYLVGDELWvvmeyl 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 ------------------------QLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIV 120
Cdd:cd06647    87 aggsltdvvtetcmdegqiaavcrECLQALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVG 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQlLHIFRLLGTPTEQQwpgvmalrdwhvypkweP 200
Cdd:cd06647   166 TPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIATNGTPELQN-----------------P 226
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 201 QdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06647   227 E-------KLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFL 260
STKc_PAK_II cd06648
Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase; STKs catalyze ...
2-241 1.85e-18

Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270815 [Multi-domain]  Cd Length: 261  Bit Score: 81.72  E-value: 1.85e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE-----------------------DSHRKGSnprplEASL 58
Cdd:cd06648     7 SDLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRrellfnevvimrdyqhpnivemySSYLVGD-----ELWV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFM-----------------------FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAY 115
Cdd:cd06648    82 VMEFLeggaltdivthtrmneeqiatvcRAVLKALSFLHSQGVIHRDIKSDSILLTSD-GRVKLSDFGFCAQVSKEVPRR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfRLLGTPTeqqwpgvmaLRDWHvy 195
Cdd:cd06648   161 KSLVGTPYWMAPEV-ISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI-RDNEPPK---------LKNLH-- 227
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 196 pkwepqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06648   228 -------------KVSPRLRSFLDRMLVRDPAQRATAAELLNHPFL 260
STKc_PDIK1L cd13977
Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like; STKs ...
3-232 1.91e-18

Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PDIK1L is also called STK35 or CLIK-1. It is predominantly a nuclear protein which is capable of autophosphorylation. Through its interaction with the PDZ-LIM protein CLP-36, it is localized to actin stress fibers. The PDIK1L subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270879 [Multi-domain]  Cd Length: 322  Bit Score: 82.60  E-value: 1.91e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDE------------EDSHRKGSNPRPLEASLVQR--------- 61
Cdd:cd13977     1 KYSLIREVGRGSYGVVYEAVVRRTGARVAVKKIRCNAPEnvelalrefwalSSIQRQHPNVIQLEECVLQRdglaqrmsh 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 ----------------------------------------------------------FMFQLFKGVAHCHSHGVLHRDL 83
Cdd:cd13977    81 gssksdlylllvetslkgercfdprsacylwfvmefcdggdmneyllsrrpdrqtntsFMLQLSSALAFLHRNQIVHRDL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  84 KPQNLLLDKDKG--ILKIADLGLSRAFT-------VPLKAYTHEIVTL----WYRAPEVLLGstHYSTAVDIWSVGCIFA 150
Cdd:cd13977   161 KPDNILISHKRGepILKVADFGLSKVCSgsglnpeEPANVNKHFLSSAcgsdFYMAPEVWEG--HYTAKADIFALGIIIW 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 151 EMIRRQALFPGDSEfqqllhiFRLLGTPTEQQWPGVMALRDWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERI 230
Cdd:cd13977   239 AMVERITFRDGETK-------KELLGTYIQQGKEIVPLGEALLENPKLELQIPLKKKKSMNDDMKQLLRDMLAANPQERP 311

                  ..
gi 1063706111 231 SA 232
Cdd:cd13977   312 DA 313
STKc_p70S6K cd05584
Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase; STKs ...
7-245 2.06e-18

Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270736 [Multi-domain]  Cd Length: 323  Bit Score: 82.45  E-value: 2.06e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   7 LEKVGEGTYGKVYKAMEKTT---GKLVA---LKKTRLEMDEEDSHRKGSNPRPLEAS----LVQ-RFMFQ---------- 65
Cdd:cd05584     1 LKVLGKGGYGKVFQVRKTTGsdkGKIFAmkvLKKASIVRNQKDTAHTKAERNILEAVkhpfIVDlHYAFQtggklylile 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 ------LF-----KGV-----------------AHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAfTVPLKAYTH 117
Cdd:cd05584    81 ylsggeLFmhlerEGIfmedtacfylaeitlalGHLHSLGIIYRDLKPENILLDAQ-GHVKLTDFGLCKE-SIHDGTVTH 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIV-TLWYRAPEVLLGSTHySTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRllgtpteqqwpGVMALrdwhvyp 196
Cdd:cd05584   159 TFCgTIEYMAPEILTRSGH-GKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILK-----------GKLNL------- 219
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 197 kwepqdlsraVPSLSPEGIDLLTQMLKYNPAERI-----SAKAALDHPYFDSLD 245
Cdd:cd05584   220 ----------PPYLTNEARDLLKKLLKRNVSSRLgsgpgDAEEIKAHPFFRHIN 263
STKc_PIM cd14005
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
3-241 2.07e-18

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are two PIM1 and three PIM2 isoforms as a result of alternative translation initiation sites, while there is only one PIM3 protein. Compound knockout mice deficient of all three PIM kinases that survive the perinatal period show a profound reduction in body size, indicating that PIMs are important for body growth. The PIM subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270907 [Multi-domain]  Cd Length: 255  Bit Score: 81.51  E-value: 2.07e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHRKGSNPRPLEASLVQR--------------------- 61
Cdd:cd14005     1 QYEVGDLLGKGGFGTVYSGVRIRDGLPVAVKFVPKSRVTEWAMINGPVPVPLEIALLLKaskpgvpgvirlldwyerpdg 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 -------------------------------FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGlSRAFtv 110
Cdd:cd14005    81 fllimerpepcqdlfdfitergalsenlariIFRQVVEAVRHCHQRGVLHRDIKDENLLINLRTGEVKLIDFG-CGAL-- 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 pLK--AYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRrqalfpGDSEFQQllhifrllgtptEQQWpgvMA 188
Cdd:cd14005   158 -LKdsVYTDFDGTRVYSPPEWIRHGRYHGRPATVWSLGILLYDMLC------GDIPFEN------------DEQI---LR 215
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 189 LRDWHvypkwepqdlsraVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14005   216 GNVLF-------------RPRLSKECCDLISRCLQFDPSKRPSLEQILSHPWF 255
STKc_Sid2p_like cd05600
Catalytic domain of Fungal Sid2p-like Protein Serine/Threonine Kinases; STKs catalyze the ...
4-245 2.67e-18

Catalytic domain of Fungal Sid2p-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. The Sid2p-like group is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270751 [Multi-domain]  Cd Length: 386  Bit Score: 82.77  E-value: 2.67e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK----KTRLEMDE-------------EDS---------------------- 44
Cdd:cd05600    13 FQILTQVGQGGYGSVFLARKKDTGEICALKimkkKVLFKLNEvnhvlterdilttTNSpwlvkllyafqdpenvylamey 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 HRKG------SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVP------- 111
Cdd:cd05600    93 VPGGdfrtllNNSGILSEEHARFYIAEMFAAISSLHQLGYIHRDLKPENFLIDS-SGHIKLTDFGLASGTLSPkkiesmk 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 112 -----------------------------LKAYTHEIV-TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPG 161
Cdd:cd05600   172 irleevkntafleltakerrniyramrkeDQNYANSVVgSPDYMAPEVLRGEG-YDLTVDYWSLGCILFECLVGFPPFSG 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 162 DSefqqllhifrllgtpTEQQWpgvMALRDW-HVY--PKWEPQDLSravPSLSPEGIDLLTQMLKyNPAERISAKAAL-D 237
Cdd:cd05600   251 ST---------------PNETW---ANLYHWkKTLqrPVYTDPDLE---FNLSDEAWDLITKLIT-DPQDRLQSPEQIkN 308

                  ....*...
gi 1063706111 238 HPYFDSLD 245
Cdd:cd05600   309 HPFFKNID 316
STKc_CaMKI_alpha cd14167
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
2-240 3.37e-18

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271069 [Multi-domain]  Cd Length: 263  Bit Score: 81.23  E-value: 3.37e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDE---------------------EDSHRKGSN------- 50
Cdd:cd14167     3 DIYDFREVLGTGAFSEVVLAEEKRTQKLVAIKciaKKALEGKEtsieneiavlhkikhpnivalDDIYESGGHlylimql 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 -------PRPLEASL-----VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLL---LDKDKGILkIADLGLSRaFTVPLKAY 115
Cdd:cd14167    83 vsggelfDRIVEKGFyterdASKLIFQILDAVKYLHDMGIVHRDLKPENLLyysLDEDSKIM-ISDFGLSK-IEGSGSVM 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSE---FQQLLHifrllgtpTEQQWPGvmalrdw 192
Cdd:cd14167   161 STACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDaklFEQILK--------AEYEFDS------- 224
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 193 hvyPKWEpqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14167   225 ---PYWD---------DISDSAKDFIQHLMEKDPEKRFTCEQALQHPW 260
STKc_PhKG2 cd14181
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit; STKs ...
63-241 4.06e-18

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). The gamma 2 subunit (PhKG2) is also referred to as the testis/liver gamma isoform. Mutations in its gene cause autosomal-recessive glycogenosis of the liver. The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271083 [Multi-domain]  Cd Length: 279  Bit Score: 81.17  E-value: 4.06e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 MFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTvPLKAYTHEIVTLWYRAPEVL---LGSTH--YS 137
Cdd:cd14181   122 MRSLLEAVSYLHANNIVHRDLKPENILLD-DQLHIKLSDFGFSCHLE-PGEKLRELCGTPGYLAPEILkcsMDETHpgYG 199
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 138 TAVDIWSVGCIFAemirrqALFPGDSEF---QQLLhIFRLlgtpteqqwpgVMALRDWHVYPKWEpqDLSRAVPslspeg 214
Cdd:cd14181   200 KEVDLWACGVILF------TLLAGSPPFwhrRQML-MLRM-----------IMEGRYQFSSPEWD--DRSSTVK------ 253
                         170       180
                  ....*....|....*....|....*..
gi 1063706111 215 iDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14181   254 -DLISRLLVVDPEIRLTAEQALQHPFF 279
STKc_CAMKK cd14118
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase; ...
51-240 4.07e-18

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). Vertebrates contain two CaMKKs, CaMKK1 (or alpha) and CaMKK2 (or beta). CaMKK1 is involved in the regulation of glucose uptake in skeletal muscles. CaMKK2 is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. The CaMKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271020 [Multi-domain]  Cd Length: 275  Bit Score: 81.25  E-value: 4.07e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVL 130
Cdd:cd14118   109 DNPLSEETARSYFRDIVLGIEYLHYQKIIHRDIKPSNLLLGDD-GHVKIADFGVSNEFEGDDALLSSTAGTPAFMAPEAL 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 131 LGSTH-YS-TAVDIWSVGCIFaemirrQALFPGDSEFQQllhifrllgtpteqqwPGVMALrdwHVYPKWEPQDLSRAvP 208
Cdd:cd14118   188 SESRKkFSgKALDIWAMGVTL------YCFVFGRCPFED----------------DHILGL---HEKIKTDPVVFPDD-P 241
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1063706111 209 SLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14118   242 VVSEQLKDLILRMLDKNPSERITLPEIKEHPW 273
STKc_HIPK2 cd14227
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 2; ...
4-240 4.87e-18

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPK2, the most studied HIPK, is a coregulator of many transcription factors and cofactors including homeodomain proteins (Nkx and HOX families), Smad1-4, Pax6, c-Myb, AML1, the histone acetyltransferase p300, and the tumor repressor p53, among others. It regulates gene transcription during development and in DNA damage response (DDR), and mediates cell processes such as apoptosis, survival, differentiation, and proliferation. HIPK2 mediates apoptosis by phosphorylating and activating p53 during DDR, resulting in the activation of apoptotic genes. In the absence of p53, HIPK2 targets the anti-apoptotic corepressor C-terminal binding protein (CtBP), leading to CtBP's degradation and the promotion of apoptosis. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). The HIPK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271129 [Multi-domain]  Cd Length: 355  Bit Score: 82.06  E-value: 4.87e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK------------------KTRLEMDEEDSHR------------------- 46
Cdd:cd14227    17 YEVLEFLGRGTFGQVVKCWKRGTNEIVAIKilknhpsyarqgqievsiLARLSTESADDYNfvrayecfqhknhtclvfe 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ----------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGLSRAFTVPLKAY 115
Cdd:cd14227    97 mleqnlydflKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLvDPSRQPYRVKVIDFGSASHVSKAVC 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQW-PGVMALRDWH- 193
Cdd:cd14227   177 STYLQSRYYRAPEIILG-LPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPAEYLLsAGTKTTRFFNr 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 194 ----VYPKWEPQ-------------------------DLSRAVPSLSPEG-------------IDLLTQMLKYNPAERIS 231
Cdd:cd14227   256 dtdsPYPLWRLKtpedheaetgikskearkyifncldDMAQVNMTTDLEGsdmlvekadrrefIDLLKKMLTIDADKRIT 335

                  ....*....
gi 1063706111 232 AKAALDHPY 240
Cdd:cd14227   336 PIETLNHPF 344
STKc_LATS cd05598
Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor; STKs catalyze the ...
55-245 5.19e-18

Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270749 [Multi-domain]  Cd Length: 333  Bit Score: 81.59  E-value: 5.19e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAF--TVPLKAYT-HEIV-TLWYRAPEVL 130
Cdd:cd05598    99 EEDLARFYIAELVCAIESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGFrwTHDSKYYLaHSLVgTPNYIAPEVL 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 131 LgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDsefqqllhifrllgTPTEQQWPGVmalrDWHVYPKWEPQdlsravPSL 210
Cdd:cd05598   178 L-RTGYTQLCDWWSVGVILYEMLVGQPPFLAQ--------------TPAETQLKVI----NWRTTLKIPHE------ANL 232
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1063706111 211 SPEGIDLLTQMLKyNPAERISAKAALD---HPYFDSLD 245
Cdd:cd05598   233 SPEAKDLILRLCC-DAEDRLGRNGADEikaHPFFAGID 269
STKc_YSK4 cd06631
Catalytic domain of the Serine/Threonine Kinase, Yeast Sps1/Ste20-related Kinase 4; STKs ...
53-240 6.30e-18

Catalytic domain of the Serine/Threonine Kinase, Yeast Sps1/Ste20-related Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270801 [Multi-domain]  Cd Length: 266  Bit Score: 80.56  E-value: 6.30e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYTHEIV------TLWYRA 126
Cdd:cd06631    99 ALEEPVFCRYTKQILEGVAYLHNNNVIHRDIKGNNIML-MPNGVIKLIDFGCAKRLCINLSSGSQSQLlksmrgTPYWMA 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 127 PEVLLGSTHySTAVDIWSVGCIFAEMIRRQalfPGDSEFQQLLHIFRlLGTPteqqwpgvmalrdwhvypkwepqdlSRA 206
Cdd:cd06631   178 PEVINETGH-GRKSDIWSIGCTVFEMATGK---PPWADMNPMAAIFA-IGSG-------------------------RKP 227
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1063706111 207 VPSL----SPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd06631   228 VPRLpdkfSPEARDFVHACLTRDQDERPSAEQLLKHPF 265
STKc_nPKC_theta cd05619
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C theta; STKs catalyze ...
69-245 6.46e-18

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C theta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270770 [Multi-domain]  Cd Length: 331  Bit Score: 81.51  E-value: 6.46e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSThYSTAVDIWSVGCI 148
Cdd:cd05619   118 GLQFLHSKGIVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTSTFCGTPDYIAPEILLGQK-YNTSVDWWSFGVL 195
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 149 FAEMIRRQALFPGDSEfQQLLHIFRLlgtpteqqwpgvmalrDWHVYPKWepqdlsravpsLSPEGIDLLTQMLKYNPAE 228
Cdd:cd05619   196 LYEMLIGQSPFHGQDE-EELFQSIRM----------------DNPFYPRW-----------LEKEAKDILVKLFVREPER 247
                         170
                  ....*....|....*...
gi 1063706111 229 RISAKAAL-DHPYFDSLD 245
Cdd:cd05619   248 RLGVRGDIrQHPFFREIN 265
STKc_MSK_C cd14092
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
55-241 6.70e-18

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270994 [Multi-domain]  Cd Length: 311  Bit Score: 81.19  E-value: 6.70e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASlvqRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGILKIADLGLSRaFTVPLKAYTHEIVTLWYRAPEVLLG 132
Cdd:cd14092   100 EAS---RIMRQLVSAVSFMHSKGVVHRDLKPENLLFtdEDDDAEIKIVDFGFAR-LKPENQPLKTPCFTLPYAAPEVLKQ 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 133 STH---YSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHI--------FRLLGtpteQQWPGVmalrdwhvypkwepq 201
Cdd:cd14092   176 ALStqgYDESCDLWSLGVILYTMLSGQVPFQSPSRNESAAEImkriksgdFSFDG----EEWKNV--------------- 236
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1063706111 202 dlsravpslSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14092   237 ---------SSEAKSLIQGLLTVDPSKRLTMSELRNHPWL 267
STKc_HIPK1 cd14228
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 1; ...
4-180 1.49e-17

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPK1 has been implicated in regulating eye size, lens formation, and retinal morphogenesis during late embryogenesis. It also contributes to the regulation of haematopoiesis and leukaemogenesis by phosphorylating and repressing the transcription factor c-Myb, which is crucial in T- and B-cell development. In glucose-deprived conditions, HIPK1 phosphorylates Daxx, leading to its relocalization from the nucleus to the cytoplasm, where it binds and stabilizes ASK1 (apoptosis signal-regulating kinase 1), a mitogen-activated protein kinase (MAPK) kinase kinase that activates the JNK and p38 MAPK pathways. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). The HIPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271130 [Multi-domain]  Cd Length: 355  Bit Score: 80.52  E-value: 1.49e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK------------------KTRLEMDEEDSHR------------------- 46
Cdd:cd14228    17 YEVLEFLGRGTFGQVAKCWKRSTKEIVAIKilknhpsyarqgqievsiLSRLSSENADEYNfvrsyecfqhknhtclvfe 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ----------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGLSRAFTVPLKAY 115
Cdd:cd14228    97 mleqnlydflKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLvDPVRQPYRVKVIDFGSASHVSKAVC 176
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 116 THEIVTLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTE 180
Cdd:cd14228   177 STYLQSRYYRAPEIILG-LPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPAE 240
STKc_nPKC_delta cd05620
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta; STKs catalyze ...
69-245 2.30e-17

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-delta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173710 [Multi-domain]  Cd Length: 316  Bit Score: 79.60  E-value: 2.30e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGsTHYSTAVDIWSVGCI 148
Cdd:cd05620   108 GLQFLHSKGIIYRDLKLDNVMLDRD-GHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQG-LKYTFSVDWWSFGVL 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 149 FAEMIRRQALFPGDSEfQQLLHIFRlLGTPTeqqwpgvmalrdwhvYPKWepqdlsravpsLSPEGIDLLTQMLKYNPAE 228
Cdd:cd05620   186 LYEMLIGQSPFHGDDE-DELFESIR-VDTPH---------------YPRW-----------ITKESKDILEKLFERDPTR 237
                         170
                  ....*....|....*...
gi 1063706111 229 RISAKAAL-DHPYFDSLD 245
Cdd:cd05620   238 RLGVVGNIrGHPFFKTIN 255
STKc_MEKK2 cd06652
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular ...
10-184 2.50e-17

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK2 is a MAPK kinase kinase (MAPKKK or MKKK), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270818 [Multi-domain]  Cd Length: 264  Bit Score: 78.93  E-value: 2.50e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHRK-----------------------GSNPRPLEASL-------- 58
Cdd:cd06652    10 LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEvnaleceiqllknllherivqyyGCLRDPQERTLsifmeymp 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 ------------------VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAF-TVPLKAYTHEI 119
Cdd:cd06652    90 ggsikdqlksygaltenvTRKYTRQILEGVHYLHSNMIVHRDIKGANILRDS-VGNVKLGDFGASKRLqTICLSGTGMKS 168
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 120 V--TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQalfPGDSEFQQLLHIFRLLGTPTEQQWP 184
Cdd:cd06652   169 VtgTPYWMSPEVISGEG-YGRKADIWSVGCTVVEMLTEK---PPWAEFEAMAAIFKIATQPTNPQLP 231
STKc_EIF2AK4_GCN2_rpt2 cd14046
Catalytic domain, repeat 2, of the Serine/Threonine kinase, eukaryotic translation Initiation ...
4-153 2.61e-17

Catalytic domain, repeat 2, of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GCN2 (or EIF2AK4) is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. Its kinase domain is activated via conformational changes as a result of the binding of uncharged tRNA to the HisRS-like domain. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270948 [Multi-domain]  Cd Length: 278  Bit Score: 78.95  E-value: 2.61e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLemDEEDSHrkgsNPRPL-EASLVQR--------------------- 61
Cdd:cd14046     8 FEELQVLGKGAFGQVVKVRNKLDGRYYAIKKIKL--RSESKN----NSRILrEVMLLSRlnhqhvvryyqawieranlyi 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 -----------------------FMFQLFK----GVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRA-FTVPLK 113
Cdd:cd14046    82 qmeycekstlrdlidsglfqdtdRLWRLFRqileGLAYIHSQGIIHRDLKPVNIFLDSNGNV-KIGDFGLATSnKLNVEL 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1063706111 114 AY-----------------THEIVTLWYRAPEVLLGST-HYSTAVDIWSVGCIFAEMI 153
Cdd:cd14046   161 ATqdinkstsaalgssgdlTGNVGTALYVAPEVQSGTKsTYNEKVDMYSLGIIFFEMC 218
STKc_SIK cd14071
Catalytic domain of the Serine/Threonine Kinases, Salt-Inducible kinases; STKs catalyze the ...
17-146 2.74e-17

Catalytic domain of the Serine/Threonine Kinases, Salt-Inducible kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SIKs are part of a complex network that regulates Na,K-ATPase to maintain sodium homeostasis and blood pressure. Vertebrates contain three forms of SIKs (SIK1-3) from three distinct genes, which display tissue-specific effects. SIK1, also called SNF1LK, controls steroidogenic enzyme production in adrenocortical cells. In the brain, both SIK1 and SIK2 regulate energy metabolism. SIK2, also called QIK or SNF1LK2, is involved in the regulation of gluconeogenesis in the liver and lipogenesis in adipose tissues, where it phosphorylates the insulin receptor substrate-1. In the liver, SIK3 (also called QSK) regulates cholesterol and bile acid metabolism. In addition, SIK2 plays an important role in the initiation of mitosis and regulates the localization of C-Nap1, a centrosome linker protein. The SIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270973 [Multi-domain]  Cd Length: 253  Bit Score: 78.59  E-value: 2.74e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  17 KVYKAME-KTTGKLVALKKTRLEM-DEEDSHRKGSNPrplEAslvqRFMF-QLFKGVAHCHSHGVLHRDLKPQNLLLDKD 93
Cdd:cd14071    63 KLYQVMEtKDMLYLVTEYASNGEIfDYLAQHGRMSEK---EA----RKKFwQILSAVEYCHKRHIVHRDLKAENLLLDAN 135
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1063706111  94 KGIlKIADLGLSRAFTvplkayTHEIVTLW-----YRAPEVLLGSTHYSTAVDIWSVG 146
Cdd:cd14071   136 MNI-KIADFGFSNFFK------PGELLKTWcgsppYAAPEVFEGKEYEGPQLDIWSLG 186
STKc_Kin1_2 cd14077
Catalytic domain of Kin1, Kin2, and simlar Serine/Threonine Kinases; STKs catalyze the ...
53-240 2.83e-17

Catalytic domain of Kin1, Kin2, and simlar Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of yeast Kin1, Kin2, and similar proteins. Fission yeast Kin1 is a membrane-associated kinase that is involved in regulating cell surface cohesiveness during interphase. It also plays a role during mitosis, linking actomyosin ring assembly with septum synthesis and membrane closure to ensure separation of daughter cells. Budding yeast Kin1 and Kin2 act downstream of the Rab-GTPase Sec4 and are associated with the exocytic apparatus; they play roles in the secretory pathway. The Kin1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270979 [Multi-domain]  Cd Length: 267  Bit Score: 78.64  E-value: 2.83e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYTHeIVTLWYRAPEVLLG 132
Cdd:cd14077   109 KLKEKQARKFARQIASALDYLHRNSIVHRDLKIENILISKSGNI-KIIDFGLSNLYDPRRLLRTF-CGSLYFAAPELLQA 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 133 STHYSTAVDIWSVGCIFAEMIRRQAlfPGDSEFQQLLHifrllgtptEQQWPGVMAlrdwhvYPKWepqdlsravpsLSP 212
Cdd:cd14077   187 QPYTGPEVDVWSFGVVLYVLVCGKV--PFDDENMPALH---------AKIKKGKVE------YPSY-----------LSS 238
                         170       180
                  ....*....|....*....|....*...
gi 1063706111 213 EGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14077   239 ECKSLISRMLVVDPKKRATLEQVLNHPW 266
PLN03225 PLN03225
Serine/threonine-protein kinase SNT7; Provisional
55-242 4.38e-17

Serine/threonine-protein kinase SNT7; Provisional


Pssm-ID: 215638 [Multi-domain]  Cd Length: 566  Bit Score: 79.84  E-value: 4.38e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKAYTHE-IVTLWYRAPEVLLGS 133
Cdd:PLN03225  253 ENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEfLLDPRYAAPEQYIMS 332
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 134 THYSTA---------------------VDIWSVGCIFAEMIrrqalFPGDSEFQQLLHIFRLLGTPTE--QQWpgvmalR 190
Cdd:PLN03225  333 TQTPSApsapvatalspvlwqlnlpdrFDIYSAGLIFLQMA-----FPNLRSDSNLIQFNRQLKRNDYdlVAW------R 401
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 191 DwHVYPKWEPqDLSRAVPSLSPE---GIDLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:PLN03225  402 K-LVEPRASP-DLRRGFEVLDLDggaGWELLKSMMRFKGRQRISAKAALAHPYFD 454
STKc_PASK cd14004
Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase; STKs ...
3-241 4.53e-17

Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PASK (or PASKIN) is a nutrient and energy sensor and thus, plays an important role in maintaining cellular energy homeostasis. It coordinates the utilization of glucose in response to metabolic demand. It contains an N-terminal PAS domain which directly interacts and inhibits a C-terminal catalytic kinase domain. The PAS domain serves as a sensory module for different environmental signals such as light, redox state, and various metabolites. Binding of ligands to the PAS domain causes structural changes which leads to kinase activation and the phosphorylation of substrates to trigger the appropriate cellular response. The PASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270906 [Multi-domain]  Cd Length: 256  Bit Score: 77.81  E-value: 4.53e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDSHRKgSNPRPLEASLVQRF----------------- 62
Cdd:cd14004     1 DYTILKEMGEGAYGQVNLAIYKSKGKEVVIKfifKERILVDTWVRDRK-LGTVPLEIHILDTLnkrshpnivklldffed 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 -----------------------------------MFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGlSRA 107
Cdd:cd14004    80 defyylvmekhgsgmdlfdfierkpnmdekeakyiFRQVADAVKHLHDQGIVHRDIKDENVILDGN-GTIKLIDFG-SAA 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 108 FTVPLKAYTHeIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQalfpgdSEFQQLLHIFRllgtpteqqwpgvm 187
Cdd:cd14004   158 YIKSGPFDTF-VGTIDYAAPEVLRGNPYGGKEQDIWALGVLLYTLVFKE------NPFYNIEEILE-------------- 216
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 188 alRDWHVYpkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14004   217 --ADLRIP------------YAVSEDLIDLISRMLNRDVGDRPTIEELLTDPWL 256
STKc_TSSK4-like cd14162
Catalytic domain of testis-specific serine/threonine kinase 4 and similar proteins; STKs ...
4-241 5.14e-17

Catalytic domain of testis-specific serine/threonine kinase 4 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK4, also called TSSK5, is expressed in testis from haploid round spermatids to mature spermatozoa. It phosphorylates Cre-Responsive Element Binding protein (CREB), facilitating the binding of CREB to the specific cis cAMP responsive element (CRE), which is important in activating genes related to germ cell differentiation. Mutations in the human TSSK4 gene is associated with infertile Chinese men with impaired spermatogenesis. The TSSK4-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271064 [Multi-domain]  Cd Length: 259  Bit Score: 77.72  E-value: 5.14e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTrlemdeedSHRKGSN-------PRPLEA-------SLVQ--------- 60
Cdd:cd14162     2 YIVGKTLGHGSYAVVKKAYSTKHKCKVAIKIV--------SKKKAPEdylqkflPREIEVikglkhpNLICfyeaietts 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 ------------------------------RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTV 110
Cdd:cd14162    74 rvyiimelaengdlldyirkngalpepqarRWFRQLVAGVEYCHSKGVVHRDLKCENLLLDKN-NNLKITDFGFARGVMK 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 PLKAYTHEIVTLW----YRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFpGDSEFQQLLHifrllgtpTEQQWPgv 186
Cdd:cd14162   153 TKDGKPKLSETYCgsyaYASPEILRGIPYDPFLSDIWSMGVVLYTMVYGRLPF-DDSNLKVLLK--------QVQRRV-- 221
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 187 malrdwhVYPKwepqdlsraVPSLSPEGIDLLTQMLKYNPaERISAKAALDHPYF 241
Cdd:cd14162   222 -------VFPK---------NPTVSEECKDLILRMLSPVK-KRITIEEIKRDPWF 259
STKc_Kin4 cd14076
Catalytic domain of the yeast Serine/Threonine Kinase, Kin4; STKs catalyze the transfer of the ...
50-240 6.62e-17

Catalytic domain of the yeast Serine/Threonine Kinase, Kin4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Kin4 is a central component of the spindle position checkpoint (SPOC), which monitors spindle position and regulates the mitotic exit network (MEN). Kin4 associates with spindle pole bodies in mother cells to inhibit MEN signaling and delay mitosis until the anaphase nucleus is properly positioned along the mother-bud axis. Kin4 activity is regulated by both the bud neck-associated kinase Elm1 and protein phosphatase 2A. The Kin4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270978 [Multi-domain]  Cd Length: 270  Bit Score: 77.52  E-value: 6.62e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGLSRAFTVPL-KAYTHEIVTLWYRAPE 128
Cdd:cd14076    99 ARRRLKDSVACRLFAQLISGVAYLHKKGVVHRDLKLENLLLDKNRNLV-ITDFGFANTFDHFNgDLMSTSCGSPCYAAPE 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 129 -VLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRL----LGTPTeqqwpgvmalrdwhVYPKWepqdl 203
Cdd:cd14076   178 lVVSDSMYAGRKADIWSCGVILYAMLAGYLPFDDDPHNPNGDNVPRLyryiCNTPL--------------IFPEY----- 238
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1063706111 204 sravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14076   239 ------VTPKARDLLRRILVPNPRKRIRLSAIMRHAW 269
STKc_MAST cd05609
Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine ...
53-245 6.77e-17

Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also called syntrophin-associated STK (SAST) while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270760 [Multi-domain]  Cd Length: 280  Bit Score: 77.83  E-value: 6.77e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPL--KAYTHEIV---------- 120
Cdd:cd05609    96 PLPVDMARMYFAETVLALEYLHSYGIVHRDLKPDNLLI-TSMGHIKLTDFGLSKIGLMSLttNLYEGHIEkdtrefldkq 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 ---TLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSE---FQQLLHifrllgtpTEQQWPgvmalrdwhv 194
Cdd:cd05609   175 vcgTPEYIAPEVIL-RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPeelFGQVIS--------DEIEWP---------- 235
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 195 ypkwepqDLSRAVPslsPEGIDLLTQMLKYNPAERISAKAALD---HPYFDSLD 245
Cdd:cd05609   236 -------EGDDALP---DDAQDLITRLLQQNPLERLGTGGAEEvkqHPFFQDLD 279
STKc_ULK1_2-like cd14120
Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar ...
45-240 7.30e-17

Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK1 is required for efficient amino acid starvation-induced autophagy and mitochondrial clearance. ULK2 is ubiquitously expressed and is essential in autophagy induction. ULK1 and ULK2 have unique and cell-type specific roles, but also display partially redundant roles in starvation-induced autophagy. They both display neuron-specific functions: ULK1 is involved in non-clathrin-coated endocytosis in growth cones, filopodia extension, and axon branching; ULK2 plays a role in axon development. The ULK1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271022 [Multi-domain]  Cd Length: 256  Bit Score: 77.41  E-value: 7.30e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 HRKGSnprpLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG--------ILKIADLGLSRAFTVPLKAyt 116
Cdd:cd14120    84 QAKGT----LSEDTIRVFLQQIAAAMKALHSKGIVHRDLKPQNILLSHNSGrkpspndiRLKIADFGFARFLQDGMMA-- 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 heiVTL----WYRAPEVLLgSTHYSTAVDIWSVGCIFAemirrQALfPGDSEFQQllhifrllGTPTEqqwpgvmaLRdw 192
Cdd:cd14120   158 ---ATLcgspMYMAPEVIM-SLQYDAKADLWSIGTIVY-----QCL-TGKAPFQA--------QTPQE--------LK-- 209
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1063706111 193 HVYPKwePQDLSRAVPS-LSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14120   210 AFYEK--NANLRPNIPSgTSPALKDLLLGLLKRNPKDRIDFEDFFSHPF 256
STKc_CaMKI_gamma cd14166
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
2-242 7.47e-17

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I gamma; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271068 [Multi-domain]  Cd Length: 285  Bit Score: 77.73  E-value: 7.47e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDE--------------------EDSHRKGSN-------- 50
Cdd:cd14166     3 ETFIFMEVLGSGAFSEVYLVKQRSTGKLYALKcikKSPLSRDSsleneiavlkrikhenivtlEDIYESTTHyylvmqlv 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 ------PRPLE--------ASLVQRfmfQLFKGVAHCHSHGVLHRDLKPQNLLL---DKDKGILkIADLGLSraftvplK 113
Cdd:cd14166    83 sggelfDRILErgvytekdASRVIN---QVLSAVKYLHENGIVHRDLKPENLLYltpDENSKIM-ITDFGLS-------K 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYTHEIV-----TLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEfqqllhiFRLLGTPTEQQWpgvma 188
Cdd:cd14166   152 MEQNGIMstacgTPGYVAPEV-LAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-------SRLFEKIKEGYY----- 218
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 189 lrDWHVyPKWEpqDLSRAVPslspegiDLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:cd14166   219 --EFES-PFWD--DISESAK-------DFIRHLLEKNPSKRYTCEKALSHPWII 260
STKc_Nek1 cd08218
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
3-240 7.58e-17

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Nek1 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270858 [Multi-domain]  Cd Length: 256  Bit Score: 77.16  E-value: 7.58e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKK---TRLEMDEEDSHRKG-------------SNPRPLEAS--------- 57
Cdd:cd08218     1 KYVRIKKIGEGSFGKALLVKSKEDGKQYVIKEiniSKMSPKEREESRKEvavlskmkhpnivQYQESFEENgnlyivmdy 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  58 -----LVQR----------------FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYT 116
Cdd:cd08218    81 cdggdLYKRinaqrgvlfpedqildWFVQLCLALKHVHDRKILHRDIKSQNIFLTKD-GIIKLGDFGIARVLNSTVELAR 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRllGTpteqqwpgvmalrdwhvYP 196
Cdd:cd08218   160 TCIGTPYYLSPEI-CENKPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--GS-----------------YP 219
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 197 kwepqdlsrAVPS-LSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd08218   220 ---------PVPSrYSYDLRSLVSQLFKRNPRDRPSINSILEKPF 255
STKc_LRRK cd14000
Catalytic domain of the Serine/Threonine kinase, Leucine-Rich Repeat Kinase; STKs catalyze the ...
53-204 7.58e-17

Catalytic domain of the Serine/Threonine kinase, Leucine-Rich Repeat Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. Vertebrates contain two members, LRRK1 and LRRK2, which show complementary expression in the brain. Mutations in LRRK2 are linked to both familial and sporadic forms of Parkinson's disease. The normal roles of LRRKs are not clearly defined. They may be involved in mitogen-activated protein kinase (MAPK) pathways, protein translation control, programmed cell death pathways, and cytoskeletal dynamics. The LRRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270902 [Multi-domain]  Cd Length: 275  Bit Score: 77.65  E-value: 7.58e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL----DKDKGILKIADLGLSRaFTVPLKAYTHEiVTLWYRAPE 128
Cdd:cd14000   108 SLGRTLQQRIALQVADGLRYLHSAMIIYRDLKSHNVLVwtlyPNSAIIIKIADYGISR-QCCRMGAKGSE-GTPGFRAPE 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 129 VLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFR----LLGTPTEQQWPGVMAL--RDWHVYPKWEPQD 202
Cdd:cd14000   186 IARGNVIYNEKVDVFSFGMLLYEILSGGAPMVGHLKFPNEFDIHGglrpPLKQYECAPWPEVEVLmkKCWKENPQQRPTA 265

                  ..
gi 1063706111 203 LS 204
Cdd:cd14000   266 VT 267
STKc_PIM3 cd14102
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
7-240 7.64e-17

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3). PIM3 can inhibit apoptosis and promote cell survival and protein translation, therefore, it can enhance the proliferation of normal and cancer cells. Mice deficient with PIM3 show minimal effects, suggesting that PIM3 msy not be essential. Since its expression is enhanced in several cancers, it may make a good molecular target for cancer drugs. The PIM3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271004 [Multi-domain]  Cd Length: 253  Bit Score: 77.30  E-value: 7.64e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   7 LEKVGEGTYG--KVYKAMEKTTGKLVALKKTRLEMDEEDS-HRKGsnprPLEASLVQRFMFQLFKGVAHCHSHGVLHRDL 83
Cdd:cd14102    56 LKKVGSGFRGviKLLDWYERPDGFLIVMERPEPVKDLFDFiTEKG----ALDEDTARGFFRQVLEAVRHCYSCGVVHRDI 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  84 KPQNLLLDKDKGILKIADLGlSRAFtvpLK--AYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIrrqalfPG 161
Cdd:cd14102   132 KDENLLVDLRTGELKLIDFG-SGAL---LKdtVYTDFDGTRVYSPPEWIRYHRYHGRSATVWSLGVLLYDMV------CG 201
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063706111 162 DSEFQQLLHIFRllgtpteqqwpGVMALRDwhvypkwepqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14102   202 DIPFEQDEEILR-----------GRLYFRR-----------------RVSPECQQLIKWCLSLRPSDRPTLEQIFDHPW 252
STKc_Nek6 cd08228
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
8-162 8.43e-17

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270865 [Multi-domain]  Cd Length: 268  Bit Score: 77.38  E-value: 8.43e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGKLVALKKTRL-EM----------DEEDSHRKGSNP------------------------- 51
Cdd:cd08228     8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIfEMmdakarqdcvKEIDLLKQLNHPnvikyldsfiednelnivleladag 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 -------------RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd08228    88 dlsqmikyfkkqkRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSL 166
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 119 IVTLWYRAPEvLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGD 162
Cdd:cd08228   167 VGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209
STKc_GRK6 cd05630
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6; STKs ...
69-245 8.66e-17

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK6 is widely expressed in many tissues and is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270779 [Multi-domain]  Cd Length: 285  Bit Score: 77.76  E-value: 8.66e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLsrAFTVPL-KAYTHEIVTLWYRAPEVlLGSTHYSTAVDIWSVGC 147
Cdd:cd05630   114 GLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGL--AVHVPEgQTIKGRVGTVGYMAPEV-VKNERYTFSPDWWALGC 189
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 148 IFAEMIRrqalfpGDSEFQQLLHIFRllgtpteqqwpgvmalrdwhvypKWEPQDLSRAVPS-----LSPEGIDLLTQML 222
Cdd:cd05630   190 LLYEMIA------GQSPFQQRKKKIK-----------------------REEVERLVKEVPEeysekFSPQARSLCSMLL 240
                         170       180
                  ....*....|....*....|....*...
gi 1063706111 223 KYNPAERI-----SAKAALDHPYFDSLD 245
Cdd:cd05630   241 CKDPAERLgcrggGAREVKEHPLFKKLN 268
STKc_RSK1_C cd14175
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 1 (also called ...
55-249 8.91e-17

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 1 (also called Ribosomal protein S6 kinase alpha-1 or 90kDa ribosomal protein S6 kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK1 is also called S6K-alpha-1, RPS6KA1, p90RSK1 or MAPK-activated protein kinase 1a (MAPKAPK-1a). It is a component of the insulin transduction pathway, regulating the function of IRS1. It also interacts with PKA and promotes its inactivation. RSK1 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271077 [Multi-domain]  Cd Length: 291  Bit Score: 77.76  E-value: 8.91e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVqrfMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG---ILKIADLGlsraFTVPLKAYTHEIVTLWYR----AP 127
Cdd:cd14175    96 EASSV---LHTICKTVEYLHSQGVVHRDLKPSNILYVDESGnpeSLRICDFG----FAKQLRAENGLLMTPCYTanfvAP 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 128 EVlLGSTHYSTAVDIWSVGCIFAEMIRRQALF---PGDSEFQQLLHI----FRLLGTpteqqwpgvmalrDWHvypkwep 200
Cdd:cd14175   169 EV-LKRQGYDEGCDIWSLGILLYTMLAGYTPFangPSDTPEEILTRIgsgkFTLSGG-------------NWN------- 227
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 201 qdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF---DSLDKSQF 249
Cdd:cd14175   228 --------TVSDAAKDLVSKMLHVDPHQRLTAKQVLQHPWItqkDKLPQSQL 271
STKc_PKB_beta cd05595
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B beta (also called Akt2); ...
10-245 8.94e-17

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B beta (also called Akt2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain.The PKB-beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173686 [Multi-domain]  Cd Length: 323  Bit Score: 78.12  E-value: 8.94e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTRLEM---DEEDSH-----RKGSNPR-PLEASLvqRFMFQ--------------- 65
Cdd:cd05595     3 LGKGTFGKVILVREKATGRYYAMKILRKEViiaKDEVAHtvtesRVLQNTRhPFLTAL--KYAFQthdrlcfvmeyangg 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 -LF----------------------KGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTL 122
Cdd:cd05595    81 eLFfhlsrervftedrarfygaeivSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGITDGATMKTFCGTP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 123 WYRAPEVlLGSTHYSTAVDIWSVGCIFAEMI-RRQALFPGDSE--FQQLLhifrllgtpteqqwpgVMALRdwhvYPKwe 199
Cdd:cd05595   160 EYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMcGRLPFYNQDHErlFELIL----------------MEEIR----FPR-- 216
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 200 pqdlsravpSLSPEGIDLLTQMLKYNPAERI-----SAKAALDHPYFDSLD 245
Cdd:cd05595   217 ---------TLSPEAKSLLAGLLKKDPKQRLgggpsDAKEVMEHRFFLSIN 258
STKc_RSK_N cd05582
N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase; ...
59-245 9.90e-17

N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270734 [Multi-domain]  Cd Length: 317  Bit Score: 77.83  E-value: 9.90e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSR-AFTVPLKAYTHeIVTLWYRAPEVLLGSTHyS 137
Cdd:cd05582    99 VKFYLAELALALDHLHSLGIIYRDLKPENILLDED-GHIKLTDFGLSKeSIDHEKKAYSF-CGTVEYMAPEVVNRRGH-T 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 138 TAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRL-LGTPTeqqwpgvmalrdwhvypkwepqdlsravpSLSPEGID 216
Cdd:cd05582   176 QSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAkLGMPQ-----------------------------FLSPEAQS 226
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1063706111 217 LLTQMLKYNPAERISAKAA-----LDHPYFDSLD 245
Cdd:cd05582   227 LLRALFKRNPANRLGAGPDgveeiKRHPFFATID 260
STKc_PAK6 cd06659
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 6; STKs catalyze the ...
5-241 1.00e-16

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. PAK6 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270821 [Multi-domain]  Cd Length: 297  Bit Score: 77.72  E-value: 1.00e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   5 EKLEKVGEGTYGKVYKAMEKTTGKLVALK--------KTRLEMDEEDSHRKGSNPRPLE---ASLVQRFMFQL------- 66
Cdd:cd06659    24 ENYVKIGEGSTGVVCIAREKHSGRQVAVKmmdlrkqqRRELLFNEVVIMRDYQHPNVVEmykSYLVGEELWVLmeylqgg 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  67 -----------------------FKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLW 123
Cdd:cd06659   104 altdivsqtrlneeqiatvceavLQALAYLHSQGVIHRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKRKSLVGTPY 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 124 YRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHifrllgtpteqqwpgvmaLRDwhvypkwEPQDL 203
Cdd:cd06659   183 WMAPEVIS-RCPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR------------------LRD-------SPPPK 236
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1063706111 204 SRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06659   237 LKNSHKASPVLRDFLERMLVRDPQERATAQELLDHPFL 274
PKc_CLK2 cd14215
Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 2; Dual-specificity ...
2-241 1.04e-16

Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 2; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. CLK2 plays a role in hepatic insulin signaling and glucose metabolism. It is induced by the insulin/Akt pathway as part of the hepatic refeeding reponse, and it directly phosphorylates the SR domain of PGC-1alpha, which results in decreased gluconeogenic gene expression and glucose output. CLKs are involved in the phosphorylation and regulation of serine/arginine-rich (SR) proteins, which play a crucial role in pre-mRNA splicing by directing splice site selection. SR proteins are phosphorylated first by SR protein kinases (SRPKs) at the N-terminus, which leads to its assembly into nuclear speckles where splicing factors are stored. CLKs phosphorylate the C-terminal part of SR proteins, causing the nuclear speckles to dissolve and splicing factors to be recruited at sites of active transcription. Based on a conserved "EHLAMMERILG" signature motif which may be crucial for substrate specificity, CLKs are also referred to as LAMMER kinases. CLKs autophosphorylate at tyrosine residues and phosphorylate their substrates exclusively on serine/threonine residues. The CLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271117 [Multi-domain]  Cd Length: 330  Bit Score: 78.13  E-value: 1.04e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAME-KTTGKLVALK----------KTRLEM---------DEEDSHR--------------- 46
Cdd:cd14215    12 ERYEIVSTLGEGTFGRVVQCIDhRRGGARVALKiiknvekykeAARLEInvlekinekDPENKNLcvqmfdwfdyhghmc 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 --------------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-------------DKDKGILKI 99
Cdd:cd14215    92 isfellglstfdflKENNYLPYPIHQVRHMAFQVCQAVKFLHDNKLTHTDLKPENILFvnsdyeltynlekKRDERSVKS 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 100 ADLglsRAFTVPLKAYTHE-----IVTLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRL 174
Cdd:cd14215   172 TAI---RVVDFGSATFDHEhhstiVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERI 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 175 LGT-------PTEQQWPGVMALRDWH------VYPKWEPQDLSRAVPSLSPEG---IDLLTQMLKYNPAERISAKAALDH 238
Cdd:cd14215   248 LGPipsrmirKTRKQKYFYHGRLDWDentsagRYVRENCKPLRRYLTSEAEEHhqlFDLIESMLEYEPSKRLTLAAALKH 327

                  ...
gi 1063706111 239 PYF 241
Cdd:cd14215   328 PFF 330
STKc_Mos cd13979
Catalytic domain of the Serine/Threonine kinase, Oocyte maturation factor Mos; STKs catalyze ...
7-164 1.14e-16

Catalytic domain of the Serine/Threonine kinase, Oocyte maturation factor Mos; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mos (or c-Mos) is a germ-cell specific kinase that plays roles in both the release of primary arrest and the induction of secondary arrest in oocytes. It is expressed towards the end of meiosis I and is quickly degraded upon fertilization. It is a component of the cytostatic factor (CSF), which is responsible for metaphase II arrest. In addition, Mos activates a phoshorylation cascade that leads to the activation of the p34 subunit of MPF (mitosis-promoting factor or maturation promoting factor), a cyclin-dependent kinase that is responsible for the release of primary arrest in meiosis I. The Mos subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270881 [Multi-domain]  Cd Length: 265  Bit Score: 77.04  E-value: 1.14e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   7 LEKVGEGTYGKVYKAMEKttGKLVALKKTRLEMDEEDS--------------HR-------------------------- 46
Cdd:cd13979     8 QEPLGSGGFGSVYKATYK--GETVAVKIVRRRRKNRASrqsfwaelnaarlrHEnivrvlaaetgtdfaslgliimeycg 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ---------KGSNPRPLEASLvqRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTH 117
Cdd:cd13979    86 ngtlqqliyEGSEPLPLAHRI--LISLDIARALRFCHSHGIVHLDVKPANILISEQ-GVCKLCDFGCSVKLGEGNEVGTP 162
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIV---TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSE 164
Cdd:cd13979   163 RSHiggTYTYRAPELLKGER-VTPKADIYSFGITLWQMLTRELPYAGLRQ 211
STKc_Nek11 cd08222
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
38-240 1.16e-16

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 11; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270861 [Multi-domain]  Cd Length: 260  Bit Score: 76.69  E-value: 1.16e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  38 EMDEEDSHRKGSNPRPLEASLVQRFMfQLFKGVAHCHSHGVLHRDLKPQNLLLdkDKGILKIADLGLSRAFTVPLKAYTH 117
Cdd:cd08222    88 DLDDKISEYKKSGTTIDENQILDWFI-QLLLAVQYMHERRILHRDLKAKNIFL--KNNVIKVGDFGISRILMGTSDLATT 164
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrllgtpTEQQWPgvmALRDwhVYPK 197
Cdd:cd08222   165 FTGTPYYMSPEVLKHEG-YNSKSDIWSLGCILYEMCCLKHAFDGQNLLSVMYKI-------VEGETP---SLPD--KYSK 231
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 198 wepqdlsravpslspEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd08222   232 ---------------ELNAIYSRMLNKDPALRPSAAEILKIPF 259
STKc_PAK3 cd06656
Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3; Serine ...
2-241 1.28e-16

Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3; Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation.


Pssm-ID: 132987 [Multi-domain]  Cd Length: 297  Bit Score: 77.45  E-value: 1.28e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE--------MDEEDSHRKGSNPRP---LEASLVQRFMFQLFKGV 70
Cdd:cd06656    19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQqqpkkeliINEILVMRENKNPNIvnyLDSYLVGDELWVVMEYL 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  71 A-----------------------HC-------HSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIV 120
Cdd:cd06656    99 AggsltdvvtetcmdegqiaavcrEClqaldflHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVG 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQlLHIFRLLGTPTEQQwpgvmalrdwhvypkweP 200
Cdd:cd06656   178 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIATNGTPELQN-----------------P 238
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 201 QDLSRAVPslspegiDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06656   239 ERLSAVFR-------DFLNRCLEMDVDRRGSAKELLQHPFL 272
STKc_NDR_like cd05599
Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases; STKs ...
2-153 1.33e-16

Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. The NDR kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270750 [Multi-domain]  Cd Length: 324  Bit Score: 77.65  E-value: 1.33e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR-LEMDEED--SHRKGSNPRPLEAS------------------LVQ 60
Cdd:cd05599     1 EDFEPLKVIGRGAFGEVRLVRKKDTGHVYAMKKLRkSEMLEKEqvAHVRAERDILAEADnpwvvklyysfqdeenlyLIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RF------MFQLFK------------------GVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYT 116
Cdd:cd05599    81 EFlpggdmMTLLMKkdtlteeetrfyiaetvlAIESIHKLGYIHRDIKPDNLLLDA-RGHIKLSDFGLCTGLKKSHLAYS 159
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1063706111 117 hEIVTLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMI 153
Cdd:cd05599   160 -TVGTPDYIAPEVFL-QKGYGKECDWWSLGVIMYEML 194
STKc_MEKK3_like_u1 cd06653
Catalytic domain of an Uncharacterized subfamily of Mitogen-Activated Protein (MAP) ...
54-184 1.41e-16

Catalytic domain of an Uncharacterized subfamily of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of uncharacterized proteins with similarity to MEKK3, MEKK2, and related proteins; they contain an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are MAPK kinase kinases (MAPKKKs or MKKKs), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270819 [Multi-domain]  Cd Length: 264  Bit Score: 76.60  E-value: 1.41e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLS-RAFTVPLKAYTHEIV--TLWYRAPEVL 130
Cdd:cd06653   103 LTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDS-AGNVKLGDFGASkRIQTICMSGTGIKSVtgTPYWMSPEVI 181
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 131 LGSThYSTAVDIWSVGCIFAEMIRRQalfPGDSEFQQLLHIFRLLGTPTEQQWP 184
Cdd:cd06653   182 SGEG-YGRKADVWSVACTVVEMLTEK---PPWAEYEAMAAIFKIATQPTKPQLP 231
STKc_MSK_N cd05583
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
72-244 1.66e-16

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270735 [Multi-domain]  Cd Length: 268  Bit Score: 76.66  E-value: 1.66e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  72 HCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIV-TLWYRAPEVLL-GSTHYSTAVDIWSVGCIF 149
Cdd:cd05583   114 HLHKLGIIYRDIKLENILLDSE-GHVVLTDFGLSKEFLPGENDRAYSFCgTIEYMAPEVVRgGSDGHDKAVDWWSLGVLT 192
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 150 AEMIRRQALFPGDSEFQQLLHIFRLLgtpteqqwpgvmaLRDWHVYPKwepqdlsravpSLSPEGIDLLTQMLKYNPAER 229
Cdd:cd05583   193 YELLTGASPFTVDGERNSQSEISKRI-------------LKSHPPIPK-----------TFSAEAKDFILKLLEKDPKKR 248
                         170       180
                  ....*....|....*....|
gi 1063706111 230 I-----SAKAALDHPYFDSL 244
Cdd:cd05583   249 LgagprGAHEIKEHPFFKGL 268
STKc_HUNK cd14070
Catalytic domain of the Serine/Threonine Kinase, Hormonally up-regulated Neu-associated kinase ...
54-240 1.70e-16

Catalytic domain of the Serine/Threonine Kinase, Hormonally up-regulated Neu-associated kinase (also called MAK-V); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HUNK/MAK-V was identified from a mammary tumor in an MMTV-neu transgenic mouse. It is required for the metastasis of c-myc-induced mammary tumors, but is not necessary for c-myc-induced primary tumor formation or normal development. It is required for HER2/neu-induced tumor formation and maintenance of the cells' tumorigenic phenotype. It is over-expressed in aggressive subsets of ovary, colon, and breast carcinomas. HUNK interacts with synaptopodin, and may also play a role in synaptic plasticity. The HUNK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270972 [Multi-domain]  Cd Length: 262  Bit Score: 76.39  E-value: 1.70e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPlkAYTHEIVTLW----YRAPEv 129
Cdd:cd14070   100 LEEREARRYIRQLVSAVEHLHRAGVVHRDLKIENLLLDENDNI-KLIDFGLSNCAGIL--GYSDPFSTQCgspaYAAPE- 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 130 LLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGtpteqqwpgvmalrdwhvypkwepqDLSRAVPS 209
Cdd:cd14070   176 LLARKKYGPKVDVWSIGVNMYAMLTGTLPFTVEPFSLRALHQKMVDK-------------------------EMNPLPTD 230
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1063706111 210 LSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14070   231 LSPGAISFLRSLLEPDPLKRPNIKQALANRW 261
STKc_nPKC_epsilon cd05591
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C epsilon; STKs catalyze ...
74-245 1.98e-16

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C epsilon; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-epsilon subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270743 [Multi-domain]  Cd Length: 321  Bit Score: 77.15  E-value: 1.98e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMI 153
Cdd:cd05591   113 HRHGVIYRDLKLDNILLDAE-GHCKLADFGMCKEGILNGKTTTTFCGTPDYIAPEI-LQELEYGPSVDWWALGVLMYEMM 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 154 RRQALFPGDSE---FQQLLHifrllgtpteqqwpgvmalrDWHVYPKWepqdlsravpsLSPEGIDLLTQMLKYNPAERI 230
Cdd:cd05591   191 AGQPPFEADNEddlFESILH--------------------DDVLYPVW-----------LSKEAVSILKAFMTKNPAKRL 239
                         170       180
                  ....*....|....*....|..
gi 1063706111 231 SA-------KAALDHPYFDSLD 245
Cdd:cd05591   240 GCvasqggeDAIRQHPFFREID 261
STKc_DRAK2 cd14198
The catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
8-241 2.10e-16

The catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 and DRAK2 (also called STK17B). Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. DRAK2 has been implicated in inducing or enhancing apoptosis in beta cells, fibroblasts, and lymphoid cells, where it is highly expressed. It is involved in regulating many immune processes including the germinal center (GC) reaction, responses to thymus-dependent antigens, activated T cell survival, memory T cell responses. It may be involved in the development of autoimmunity. The DRAK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271100 [Multi-domain]  Cd Length: 270  Bit Score: 76.50  E-value: 2.10e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGKLVA---LKKTRLEMD--EEDSHR------KGSNPR------------------------ 52
Cdd:cd14198    14 KELGRGKFAVVRQCISKSTGQEYAakfLKKRRRGQDcrAEILHEiavlelAKSNPRvvnlhevyettseiilileyaagg 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 -------PLEASLVQ-----RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDK--GILKIADLGLSRafTVPLKAYTHE 118
Cdd:cd14198    94 eifnlcvPDLAEMVSendiiRLIRQILEGVYYLHQNNIVHLDLKPQNILLSSIYplGDIKIVDFGMSR--KIGHACELRE 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IV-TLWYRAPEVLlgstHY---STAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWpgvmalrdwhv 194
Cdd:cd14198   172 IMgTPEYLAPEIL----NYdpiTTATDMWNIGVIAYMLLTHESPFVGEDNQETFLNISQVNVDYSEETF----------- 236
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 195 ypkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14198   237 -------------SSVSQLATDFIQKLLVKNPEKRPTAEICLSHSWL 270
STKc_CaMKI cd14083
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
2-148 2.49e-16

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270985 [Multi-domain]  Cd Length: 259  Bit Score: 75.87  E-value: 2.49e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVA----------------------LKKTR-------LEMDEEDSH------- 45
Cdd:cd14083     3 DKYEFKEVLGTGAFSEVVLAEDKATGKLVAikcidkkalkgkedsleneiavLRKIKhpnivqlLDIYESKSHlylvmel 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 -----------RKGSNPRPlEASLVqrfMFQLFKGVAHCHSHGVLHRDLKPQNLL---LDKDKGILkIADLGLSraftvp 111
Cdd:cd14083    83 vtggelfdrivEKGSYTEK-DASHL---IRQVLEAVDYLHSLGIVHRDLKPENLLyysPDEDSKIM-ISDFGLS------ 151
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 112 lKAYTHEIV-----TLWYRAPEVlLGSTHYSTAVDIWSVGCI 148
Cdd:cd14083   152 -KMEDSGVMstacgTPGYVAPEV-LAQKPYGKAVDCWSIGVI 191
TyrKc smart00219
Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.
5-152 2.81e-16

Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.


Pssm-ID: 197581 [Multi-domain]  Cd Length: 257  Bit Score: 75.65  E-value: 2.81e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111    5 EKLEKVGEGTYGKVYKAM----EKTTGKLVALKKTRLEMDEED--------------SHR-------------------- 46
Cdd:smart00219   2 TLGKKLGEGAFGEVYKGKlkgkGGKKKVEVAVKTLKEDASEQQieeflrearimrklDHPnvvkllgvcteeeplyivme 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   47 ---KGS-------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAftvplkAYT 116
Cdd:smart00219  82 ymeGGDllsylrkNRPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL-VVKISDFGLSRD------LYD 154
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1063706111  117 HEIVTL--------WYrAPEVLLgSTHYSTAVDIWSVGCIFAEM 152
Cdd:smart00219 155 DDYYRKrggklpirWM-APESLK-EGKFTSKSDVWSFGVLLWEI 196
STKc_PKN cd05589
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N; STKs catalyze the transfer ...
11-245 2.88e-16

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270741 [Multi-domain]  Cd Length: 326  Bit Score: 76.57  E-value: 2.88e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  11 GEGTYGKVYKAMEKTTGKLVALKKTR----LEMDEEDSHRkgSNPRPLEAS-------LVQRF-MFQ------------- 65
Cdd:cd05589     8 GRGHFGKVLLAEYKPTGELFAIKALKkgdiIARDEVESLM--CEKRIFETVnsarhpfLVNLFaCFQtpehvcfvmeyaa 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 -----------LFK-------------GVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGL--------SRAFTVplk 113
Cdd:cd05589    86 ggdlmmhihedVFSepravfyaacvvlGLQFLHEHKIVYRDLKLDNLLLDTE-GYVKIADFGLckegmgfgDRTSTF--- 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYTHEIVtlwyrAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSE---FQQLLHifrllgtpteqqwpgvMALR 190
Cdd:cd05589   162 CGTPEFL-----APEVLT-DTSYTRAVDWWGLGVLIYEMLVGESPFPGDDEeevFDSIVN----------------DEVR 219
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 191 dwhvYPKWepqdlsravpsLSPEGIDLLTQMLKYNPAERI--SAKAALD---HPYFDSLD 245
Cdd:cd05589   220 ----YPRF-----------LSTEAISIMRRLLRKNPERRLgaSERDAEDvkkQPFFRNID 264
PknB_PASTA_kin NF033483
Stk1 family PASTA domain-containing Ser/Thr kinase;
4-163 3.39e-16

Stk1 family PASTA domain-containing Ser/Thr kinase;


Pssm-ID: 468045 [Multi-domain]  Cd Length: 563  Bit Score: 77.53  E-value: 3.39e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEM-------------------------------DEEDS-------- 44
Cdd:NF033483    9 YEIGERIGRGGMAEVYLAKDTRLDRDVAVKVLRPDLardpefvarfrreaqsaaslshpnivsvydvGEDGGipyivmey 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 ----------HRKGsnPRPLEASLvqRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKA 114
Cdd:NF033483   89 vdgrtlkdyiREHG--PLSPEEAV--EIMIQILSALEHAHRNGIVHRDIKPQNILITKD-GRVKVTDFGIARALSSTTMT 163
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YTHEIvtlwyrapevlLGSTHY--------STA---VDIWSVGCIFAEMIRRQALFPGDS 163
Cdd:NF033483  164 QTNSV-----------LGTVHYlspeqargGTVdarSDIYSLGIVLYEMLTGRPPFDGDS 212
STYKc smart00221
Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class ...
5-152 3.41e-16

Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.


Pssm-ID: 214568 [Multi-domain]  Cd Length: 258  Bit Score: 75.66  E-value: 3.41e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111    5 EKLEKVGEGTYGKVYKAM----EKTTGKLVALKKTRLEMDEED--------------SHR-------------------- 46
Cdd:smart00221   2 TLGKKLGEGAFGEVYKGTlkgkGDGKEVEVAVKTLKEDASEQQieeflrearimrklDHPnivkllgvcteeeplmivme 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   47 ---KGS------NPRPLEASLVQ--RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFT------ 109
Cdd:smart00221  82 ympGGDlldylrKNRPKELSLSDllSFALQIARGMEYLESKNFIHRDLAARNCLVGENL-VVKISDFGLSRDLYdddyyk 160
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 1063706111  110 -----VPLKaytheivtlWYrAPEVLLgSTHYSTAVDIWSVGCIFAEM 152
Cdd:smart00221 161 vkggkLPIR---------WM-APESLK-EGKFTSKSDVWSFGVLLWEI 197
STKc_MSK2_C cd14180
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
55-163 3.57e-16

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271082 [Multi-domain]  Cd Length: 309  Bit Score: 76.06  E-value: 3.57e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVQRfmfQLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEvLLG 132
Cdd:cd14180   102 EASQLMR---SLVSAVSFMHEAGVVHRDLKPENILYadESDGAVLKVIDFGFARLRPQGSRPLQTPCFTLQYAAPE-LFS 177
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1063706111 133 STHYSTAVDIWSVGCIFAEMIRRQALFPGDS 163
Cdd:cd14180   178 NQGYDESCDLWSLGVILYTMLSGQVPFQSKR 208
STKc_OSR1_SPAK cd06610
Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and ...
2-159 3.64e-16

Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270787 [Multi-domain]  Cd Length: 267  Bit Score: 75.47  E-value: 3.64e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE-----MDE---------EDSHR--------------------- 46
Cdd:cd06610     1 DDYELIEVIGSGATAVVYAAYCLPKKEKVAIKRIDLEkcqtsMDElrkeiqamsQCNHPnvvsyytsfvvgdelwlvmpl 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ----------KGSNPRP-LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAF----TVP 111
Cdd:cd06610    81 lsggslldimKSSYPRGgLDEAIIATVLKEVLKGLEYLHSNGQIHRDVKAGNILLGEDGSV-KIADFGVSASLatggDRT 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 112 LKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALF 159
Cdd:cd06610   160 RKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 207
STKc_EIF2AK2_PKR cd14047
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
4-153 3.67e-16

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 2 or Protein Kinase regulated by RNA; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKR (or EIF2AK2) contains an N-terminal double-stranded RNA (dsRNA) binding domain and a C-terminal catalytic kinase domain. It is activated by dsRNA, which is produced as a replication intermediate in virally infected cells. It plays a key role in mediating innate immune responses to viral infection. PKR is also directly activated by PACT (protein activator of PKR) and heparin, and is inhibited by viral proteins and RNAs. PKR also regulates transcription and signal transduction in diseased cells, playing roles in tumorigenesis and neurodegenerative diseases. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The PKR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270949 [Multi-domain]  Cd Length: 267  Bit Score: 75.61  E-value: 3.67e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRL-------------EMDEED------------------------SHR 46
Cdd:cd14047     8 FKEIELIGSGGFGQVFKAKHRIDGKTYAIKRVKLnnekaerevkalaKLDHPNivryngcwdgfdydpetsssnssrSKT 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 -----------KGS--------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRA 107
Cdd:cd14047    88 kclfiqmefceKGTleswiekrNGEKLDKVLALEIFEQITKGVEYIHSKKLIHRDLKPSNIFLVDTGKV-KIGDFGLVTS 166
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 108 FTVPLKAyTHEIVTLWYRAPEvLLGSTHYSTAVDIWSVGCIFAEMI 153
Cdd:cd14047   167 LKNDGKR-TKSKGTLSYMSPE-QISSQDYGKEVDIYALGLILFELL 210
PHA03209 PHA03209
serine/threonine kinase US3; Provisional
50-244 3.68e-16

serine/threonine kinase US3; Provisional


Pssm-ID: 177557 [Multi-domain]  Cd Length: 357  Bit Score: 76.45  E-value: 3.68e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 NPRPL---EASLVQRfmfQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRaFTVPLKAYTHEIVTLWYRA 126
Cdd:PHA03209  150 RSRPLpidQALIIEK---QILEGLRYLHAQRIIHRDVKTENIFIN-DVDQVCIGDLGAAQ-FPVVAPAFLGLAGTVETNA 224
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 127 PEVlLGSTHYSTAVDIWSVGCIFAEMIRR-QALF---------PGDSEFQQLLHIFRLLGTPTEQ--QWPGVMALRDWHV 194
Cdd:PHA03209  225 PEV-LARDKYNSKADIWSAGIVLFEMLAYpSTIFedppstpeeYVKSCHSHLLKIISTLKVHPEEfpRDPGSRLVRGFIE 303
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 195 YPKWEPQDLSR----AVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:PHA03209  304 YASLERQPYTRypcfQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357
STKc_PAK1 cd06654
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1; STKs catalyze the ...
2-241 4.36e-16

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. PAK1 belongs to the group I PAKs, which contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270820 [Multi-domain]  Cd Length: 296  Bit Score: 75.92  E-value: 4.36e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE--------MDEEDSHRKGSNPRP---LEASLVQRFMF------ 64
Cdd:cd06654    20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQqqpkkeliINEILVMRENKNPNIvnyLDSYLVGDELWvvmeyl 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 ------------------------QLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIV 120
Cdd:cd06654   100 aggsltdvvtetcmdegqiaavcrECLQALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVG 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQlLHIFRLLGTPTEQQwpgvmalrdwhvypkweP 200
Cdd:cd06654   179 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPELQN-----------------P 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 201 QDLSRAVPslspegiDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06654   240 EKLSAIFR-------DFLNRCLEMDVEKRGSAKELLQHQFL 273
STKc_CaMKIV cd14085
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
65-240 4.61e-16

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type IV; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKIV is found predominantly in neurons and immune cells. It is activated by the binding of calcium/CaM and phosphorylation by CaMKK (alpha or beta). The CaMKK-CaMKIV cascade participates in regulating several transcription factors like CREB, MEF2, and retinoid orphan receptors. It also is implicated in T-cell development and signaling, cytokine secretion, and signaling through Toll-like receptors, and is thus, pivotal in immune response and inflammation. The CaMKIV subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270987 [Multi-domain]  Cd Length: 294  Bit Score: 75.63  E-value: 4.61e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGILKIADLGLSRafTVPLKAYTHEIV-TLWYRAPEVLLGSThYSTAVD 141
Cdd:cd14085   106 QILEAVAYLHENGIVHRDLKPENLLYatPAPDAPLKIADFGLSK--IVDQQVTMKTVCgTPGYCAPEILRGCA-YGPEVD 182
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 142 IWSVGCIFAEMIRRQALFPGDSEFQQLLHifRLLGTPTEqqwpgvmalrdwHVYPKWEpqdlsravpSLSPEGIDLLTQM 221
Cdd:cd14085   183 MWSVGVITYILLCGFEPFYDERGDQYMFK--RILNCDYD------------FVSPWWD---------DVSLNAKDLVKKL 239
                         170
                  ....*....|....*....
gi 1063706111 222 LKYNPAERISAKAALDHPY 240
Cdd:cd14085   240 IVLDPKKRLTTQQALQHPW 258
PLN00034 PLN00034
mitogen-activated protein kinase kinase; Provisional
5-240 4.61e-16

mitogen-activated protein kinase kinase; Provisional


Pssm-ID: 215036 [Multi-domain]  Cd Length: 353  Bit Score: 76.40  E-value: 4.61e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   5 EKLEKVGEGTYGKVYKAMEKTTGKLVALKKtrLEMDEEDSHRK-----------GSNPRPL----------EASLVQRFM 63
Cdd:PLN00034   77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKV--IYGNHEDTVRRqicreieilrdVNHPNVVkchdmfdhngEIQVLLEFM 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 --------------------FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYTHEIVTLW 123
Cdd:PLN00034  155 dggslegthiadeqfladvaRQILSGIAYLHRRHIVHRDIKPSNLLINSAKNV-KIADFGVSRILAQTMDPCNSSVGTIA 233
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 124 YRAPEVL---LGSTHYS-TAVDIWSVGCIFAE--MIRrqalFPgdsefqqllhifrlLGTPTEQQWPGVMALRDWHVYPK 197
Cdd:PLN00034  234 YMSPERIntdLNHGAYDgYAGDIWSLGVSILEfyLGR----FP--------------FGVGRQGDWASLMCAICMSQPPE 295
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 198 wepqdlsrAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:PLN00034  296 --------APATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330
STKc_PSKH1 cd14087
Catalytic domain of the Protein Serine/Threonine kinase H1; STKs catalyze the transfer of the ...
6-240 4.69e-16

Catalytic domain of the Protein Serine/Threonine kinase H1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PSKH1 is an autophosphorylating STK that is expressed ubiquitously and exhibits multiple intracellular localizations including the centrosome, Golgi apparatus, and splice factor compartments. It contains a catalytic kinase domain and an N-terminal SH4-like motif that is acylated to facilitate membrane attachment. PSKH1 plays a rile in the maintenance of the Golgi apparatus, an important organelle within the secretory pathway. It may also function as a novel splice factor and a regulator of prostate cancer cell growth. The PSKH1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270989 [Multi-domain]  Cd Length: 259  Bit Score: 75.26  E-value: 4.69e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   6 KLEKVGEgTYGKVYKAMEKTTG-KLVALKKTRLEMDEEDShrkgsnprpleaslvQRFMFQLFKGVAHCHSHGVLHRDLK 84
Cdd:cd14087    61 QLIEVFE-TKERVYMVMELATGgELFDRIIAKGSFTERDA---------------TRVLQMVLDGVKYLHGLGITHRDLK 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  85 PQNLLL---DKDKGILkIADLGL-SRAFTVPLKAYTHEIVTLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFP 160
Cdd:cd14087   125 PENLLYyhpGPDSKIM-ITDFGLaSTRKKGPNCLMKTTCGTPEYIAPEILL-RKPYTQSVDMWAVGVIAYILLSGTMPFD 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 161 GDSEFQQLLHIFRLLGTPTEQQWPGVmalrdwhvypkwepqdlsravpslSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14087   203 DDNRTRLYRQILRAKYSYSGEPWPSV------------------------SNLAKDFIDRLLTVNPGERLSATQALKHPW 258
STKc_beta_ARK cd05606
Catalytic domain of the Serine/Threonine Kinase, beta-adrenergic receptor kinase; STKs ...
69-245 4.83e-16

Catalytic domain of the Serine/Threonine Kinase, beta-adrenergic receptor kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The beta-ARK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270757 [Multi-domain]  Cd Length: 279  Bit Score: 75.55  E-value: 4.83e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTvplKAYTHEIV-TLWYRAPEVLLGSTHYSTAVDIWSVGC 147
Cdd:cd05606   110 GLEHMHNRFIVYRDLKPANILLD-EHGHVRISDLGLACDFS---KKKPHASVgTHGYMAPEVLQKGVAYDSSADWFSLGC 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 148 IFAEMIRrqalfpGDSEFQQllhifrllgtpteqqwpgvMALRDWHVYPKwepQDLSRAVP---SLSPEGIDLLTQMLKY 224
Cdd:cd05606   186 MLYKLLK------GHSPFRQ-------------------HKTKDKHEIDR---MTLTMNVElpdSFSPELKSLLEGLLQR 237
                         170       180
                  ....*....|....*....|....*.
gi 1063706111 225 NPAERI-----SAKAALDHPYFDSLD 245
Cdd:cd05606   238 DVSKRLgclgrGATEVKEHPFFKGVD 263
STKc_SNT7_plant cd14013
Catalytic domain of the Serine/Threonine kinase, Plant SNT7; STKs catalyze the transfer of the ...
55-241 5.05e-16

Catalytic domain of the Serine/Threonine kinase, Plant SNT7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SNT7 is a plant thylakoid-associated kinase that is essential in short- and long-term acclimation responses to cope with various light conditions in order to maintain photosynthetic redox poise for optimal photosynthetic performance. Short-term response involves state transitions over periods of minutes while the long-term response (LTR) occurs over hours to days and involves changing the relative amounts of photosystems I and II. SNT7 acts as a redox sensor and a signal transducer for both responses, which are triggered by the redox state of the plastoquinone (PQ) pool. It is positioned at the top of a phosphorylation cascade that induces state transitions by phosphorylating light-harvesting complex II (LHCII), and triggers the LTR through the phosphorylation of chloroplast proteins. The SNT7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270915 [Multi-domain]  Cd Length: 318  Bit Score: 75.94  E-value: 5.05e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKAYTHE-IVTLWYRAPEVLLGS 133
Cdd:cd14013   118 ENVIIKSIMRQILVALRKLHSTGIVHRDVKPQNIIVSEGDGQFKIIDLGAAADLRIGINYIPKEfLLDPRYAPPEQYIMS 197
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 134 THYSTA---------------------VDIWSVGCIFAEM----IRRQA-LFPGDSEFQQllhifrllgtpteqqwpgvm 187
Cdd:cd14013   198 TQTPSAppapvaaalspvlwqmnlpdrFDMYSAGVILLQMafpnLRSDSnLIAFNRQLKQ-------------------- 257
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 188 alRDWHVyPKWEPQDLSRAVPSLSPE----------GIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14013   258 --CDYDL-NAWRMLVEPRASADLREGfeildlddgaGWDLVTKLIRYKPRGRLSASAALAHPYF 318
STKc_NAK1_like cd06917
Catalytic domain of Fungal Nak1-like Serine/Threonine Kinases; STKs catalyze the transfer of ...
4-249 5.45e-16

Catalytic domain of Fungal Nak1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also called N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270822 [Multi-domain]  Cd Length: 277  Bit Score: 75.20  E-value: 5.45e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED---------------------------------------- 43
Cdd:cd06917     3 YRRLELVGRGSYGAVYRGYHVKTGRVVALKVLNLDTDDDDvsdiqkevallsqlklgqpkniikyygsylkgpslwiimd 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 -----SHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHE 118
Cdd:cd06917    83 yceggSIRTLMRAGPIAERYIAVIMREVLVALKFIHKDGIIHRDIKAANILVTNT-GNVKLCDFGVAASLNQNSSKRSTF 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIrrqalfpgdsefqqllhifrlLGTPTeqqWPGVMALRDWHVYPKW 198
Cdd:cd06917   162 VGTPYWMAPEVITEGKYYDTKADIWSLGITTYEMA---------------------TGNPP---YSDVDALRAVMLIPKS 217
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 199 EPQDLSRAvpSLSPEGIDLLTQMLKYNPAERISAkaaldhpyfDSLDKSQF 249
Cdd:cd06917   218 KPPRLEGN--GYSPLLKEFVAACLDEEPKDRLSA---------DELLKSKW 257
PTKc cd00192
Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
8-147 6.88e-16

Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers.The PTK family is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270623 [Multi-domain]  Cd Length: 262  Bit Score: 74.88  E-value: 6.88e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAM---EKTTGKLVALKKTRLEMDEED--------------SH------------------------- 45
Cdd:cd00192     1 KKLGEGAFGEVYKGKlkgGDGKTVDVAVKTLKEDASESErkdflkearvmkklGHpnvvrllgvcteeeplylvmeymeg 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 ---------RKGSNPRPLEASL----VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSR------ 106
Cdd:cd00192    81 gdlldflrkSRPVFPSPEPSTLslkdLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL-VVKISDFGLSRdiyddd 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 107 ------AFTVPLKaytheivtlWYrAPEVLLGSThYSTAVDIWSVGC 147
Cdd:cd00192   160 yyrkktGGKLPIR---------WM-APESLKDGI-FTSKSDVWSFGV 195
STKc_EIF2AK3_PERK cd14048
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
65-238 7.37e-16

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 3 or PKR-like Endoplasmic Reticulum Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PERK (or EIF2AK3) is a type-I ER transmembrane protein containing a luminal domain bound with the chaperone BiP under unstressed conditions and a cytoplasmic catalytic kinase domain. In response to the accumulation of misfolded or unfolded proteins in the ER, PERK is activated through the release of BiP, allowing it to dimerize and autophosphorylate. It functions as the central regulator of translational control during the Unfolded Protein Response (UPR) pathway. In addition to the eIF-2 alpha subunit, PERK also phosphorylates Nrf2, a leucine zipper transcription factor which regulates cellular redox status and promotes cell survival during the UPR. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The PERK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270950 [Multi-domain]  Cd Length: 281  Bit Score: 74.91  E-value: 7.37e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRA-------FTV--PLKAY---THEIVTLWYRAPEVLLG 132
Cdd:cd14048   126 QIASAVEYLHSKGLIHRDLKPSNVFFSLD-DVVKVGDFGLVTAmdqgepeQTVltPMPAYakhTGQVGTRLYMSPEQIHG 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 133 SThYSTAVDIWSVGCIFAEMIrrqalFPGDSEFQQLLHI--FRLLGTPteqqwpgvmALRDWHVypkwepqdlsravpsl 210
Cdd:cd14048   205 NQ-YSEKVDIFALGLILFELI-----YSFSTQMERIRTLtdVRKLKFP---------ALFTNKY---------------- 253
                         170       180
                  ....*....|....*....|....*...
gi 1063706111 211 sPEGIDLLTQMLKYNPAERISAKAALDH 238
Cdd:cd14048   254 -PEERDMVQQMLSPSPSERPEAHEVIEH 280
STKc_DCKL2 cd14184
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 2 (also called ...
2-240 7.96e-16

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 2 (also called Doublecortin-like and CAM kinase-like 2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL2 (or DCAMKL2) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL2 contains a serine, threonine, and proline rich domain (SP) and a C-terminal kinase domain with similarity to CAMKs. DCKL2 has been shown to interact with tubulin, JIP1/2, JNK, neurabin 2, and actin. It is associated with the terminal segments of axons and dendrites, and may function as a phosphorylation-dependent switch to control microtubule dynamics in neuronal growth cones. The DCKL2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271086 [Multi-domain]  Cd Length: 259  Bit Score: 74.68  E-value: 7.96e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---------KTRLEMDEEDSHRKGSNPR----------PLEASLVQRF 62
Cdd:cd14184     1 EKYKIGKVIGDGNFAVVKECVERSTGKEFALKiidkakccgKEHLIENEVSILRRVKHPNiimlieemdtPAELYLVMEL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 M------------------------FQLFKGVAHCHSHGVLHRDLKPQNLLL----DKDKGiLKIADLGLSRAFTVPLka 114
Cdd:cd14184    81 VkggdlfdaitsstkyterdasamvYNLASALKYLHGLCIVHRDIKPENLLVceypDGTKS-LKLGDFGLATVVEGPL-- 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YThEIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGtptEQQWPGvmalrdwhv 194
Cdd:cd14184   158 YT-VCGTPTYVAPEI-IAETGYGLKVDIWAAGVITYILLCGFPPFRSENNLQEDLFDQILLG---KLEFPS--------- 223
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 195 yPKWEpqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14184   224 -PYWD---------NITDSAKELISHMLQVNVEARYTAEQILSHPW 259
PKc_PBS2_like cd06622
Catalytic domain of fungal PBS2-like dual-specificity Mitogen-Activated Protein Kinase Kinases; ...
5-244 8.42e-16

Catalytic domain of fungal PBS2-like dual-specificity Mitogen-Activated Protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. The PBS2 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132953 [Multi-domain]  Cd Length: 286  Bit Score: 74.89  E-value: 8.42e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   5 EKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDE----------EDSHR---------------------------- 46
Cdd:cd06622     4 EVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDEskfnqiimelDILHKavspyivdfygaffiegavymcmeymda 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 --------KGSNPRPLEASLVQRFMFQLFKGVAHC-HSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLkAYTH 117
Cdd:cd06622    84 gsldklyaGGVATEGIPEDVLRRITYAVVKGLKFLkEEHNIIHRDVKPTNVLVNG-NGQVKLCDFGVSGNLVASL-AKTN 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 eIVTLWYRAPEVLLGST-----HYSTAVDIWSVGCIFAEMIRRQALFP---GDSEFQQLLHIFRllGTPteqqwPGVmal 189
Cdd:cd06622   162 -IGCQSYMAPERIKSGGpnqnpTYTVQSDVWSLGLSILEMALGRYPYPpetYANIFAQLSAIVD--GDP-----PTL--- 230
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 190 rdwhvyPkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:cd06622   231 ------P-----------SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268
STKc_TSSK1_2-like cd14165
Catalytic domain of testis-specific serine/threonine kinase 1, TSSK2, and similar proteins; ...
1-241 9.79e-16

Catalytic domain of testis-specific serine/threonine kinase 1, TSSK2, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK1 and TSSK2 are expressed specifically in meiotic and postmeiotic spermatogenic cells, respectively. TSSK2 is localized in the sperm neck, equatorial segment, and mid-piece of the sperm tail. Both TSSK1 and TSSK2 phosphorylate their common substrate TSKS (testis-specific-kinase-substrate). TSSK1/TSSK2 double knock-out mice are sterile without manifesting other defects, making these kinases viable targets for male contraception. The TSSK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271067 [Multi-domain]  Cd Length: 263  Bit Score: 74.43  E-value: 9.79e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKvgegTYGKVYKAME-KTTGKLVALKKTRLEMDEEDShrkgsnprpleaslvQRFMFQLFKGVAHCHSHGVL 79
Cdd:cd14165    64 IKTYEIFET----SDGKVYIVMElGVQGDLLEFIKLRGALPEDVA---------------RKMFHQLSSAIKYCHELDIV 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  80 HRDLKPQNLLLDKDKGIlKIADLGLSRAFtvpLKAYTHEIV-------TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEM 152
Cdd:cd14165   125 HRDLKCENLLLDKDFNI-KLTDFGFSKRC---LRDENGRIVlsktfcgSAAYAAPEVLQGIPYDPRIYDIWSLGVILYIM 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 153 IRRQALFpGDSEFQQLLHIfrllgtpteqqwpgvmaLRDWHV-YPKWEpqdlsravpSLSPEGIDLLTQMLKYNPAERIS 231
Cdd:cd14165   201 VCGSMPY-DDSNVKKMLKI-----------------QKEHRVrFPRSK---------NLTSECKDLIYRLLQPDVSQRLC 253
                         250
                  ....*....|
gi 1063706111 232 AKAALDHPYF 241
Cdd:cd14165   254 IDEVLSHPWL 263
STKc_GAK_like cd13985
Catalytic domain of cyclin G-Associated Kinase-like proteins; STKs catalyze the transfer of ...
3-232 1.07e-15

Catalytic domain of cyclin G-Associated Kinase-like proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes cyclin G-Associated Kinase (GAK), Drosophila melanogaster Numb-Associated Kinase (NAK)-like proteins, and similar protein kinases. GAK plays regulatory roles in clathrin-mediated membrane trafficking, the maintenance of centrosome integrity and chromosome congression, neural patterning, survival of neurons, and immune responses. NAK plays a role in asymmetric cell division through its association with Numb. It also regulates the localization of Dlg, a protein essential for septate junction formation. The GAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270887 [Multi-domain]  Cd Length: 272  Bit Score: 74.29  E-value: 1.07e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKT-------------------RLE--------MDEEDSHRKG------- 48
Cdd:cd13985     1 RYQVTKQLGEGGFSYVYLAHDVNTGRRYALKRMyfndeeqlrvaikeieimkRLCghpnivqyYDSAILSSEGrkevlll 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 --------------SNPRPLEASLVQRFMFQLFKGVAHCHSHG--VLHRDLKPQNLLLdKDKGILKIADLG-LSRAFTVP 111
Cdd:cd13985    81 meycpgslvdilekSPPSPLSEEEVLRIFYQICQAVGHLHSQSppIIHRDIKIENILF-SNTGRFKLCDFGsATTEHYPL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 112 LKA-----YTHEI---VTLWYRAPEV--LLGSTHYSTAVDIWSVGCIFAEMIRRQalfpgdsefqqllhifrllgTPTEQ 181
Cdd:cd13985   160 ERAeevniIEEEIqknTTPMYRAPEMidLYSKKPIGEKADIWALGCLLYKLCFFK--------------------LPFDE 219
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 182 QWPgvmaLRDWHVYPKWEPQdlsravPSLSPEGIDLLTQMLKYNPAERISA 232
Cdd:cd13985   220 SSK----LAIVAGKYSIPEQ------PRYSPELHDLIRHMLTPDPAERPDI 260
STKc_PhKG1 cd14182
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 1 subunit; STKs ...
60-241 1.08e-15

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 1 subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). The gamma 1 subunit (PhKG1) is also referred to as the muscle gamma isoform. The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271084 [Multi-domain]  Cd Length: 276  Bit Score: 74.57  E-value: 1.08e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  60 QRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSraFTVPLKAYTHEIV-TLWYRAPEVLLGSTH--- 135
Cdd:cd14182   113 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNI-KLTDFGFS--CQLDPGEKLREVCgTPGYLAPEIIECSMDdnh 189
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 136 --YSTAVDIWSVGCIFaemirrQALFPGDSEF---QQLLhIFRLlgtpteqqwpgVMALRDWHVYPKWEpqDLSRAVPsl 210
Cdd:cd14182   190 pgYGKEVDMWSTGVIM------YTLLAGSPPFwhrKQML-MLRM-----------IMSGNYQFGSPEWD--DRSDTVK-- 247
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1063706111 211 spegiDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14182   248 -----DLISRFLVVQPQKRYTAEEALAHPFF 273
STKc_Nek9 cd08221
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
54-241 1.35e-15

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 9; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Nek9 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270860 [Multi-domain]  Cd Length: 256  Bit Score: 74.00  E-value: 1.35e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGS 133
Cdd:cd08221    98 FPEEVVLWYLYQIVSAVSHIHKAGILHRDIKTLNIFLTK-ADLVKLGDFGISKVLDSESSMAESIVGTPYYMSPELVQGV 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 134 ThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrllgtpteqqwpgvmalrdwhVYPKWEPQDlsravPSLSPE 213
Cdd:cd08221   177 K-YNFKSDIWAVGCVLYELLTLKRTFDATNPLRLAVKI----------------------VQGEYEDID-----EQYSEE 228
                         170       180
                  ....*....|....*....|....*...
gi 1063706111 214 GIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd08221   229 IIQLVHDCLHQDPEDRPTAEELLERPLL 256
PK_Unc-89_rpt1 cd14109
Pseudokinase domain, first repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein ...
59-241 1.42e-15

Pseudokinase domain, first repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein 89; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. The nematode Unc-89 gene, through alternative promoter use and splicing, encodes at least six major isoforms (Unc-89A to Unc-89F) of giant muscle proteins that are homologs for the vetebrate obscurin. In flies, five isoforms of Unc-89 have been detected: four in the muscles of adult flies (two in the indirect flight muscle and two in other muscles) and another isoform in the larva. Unc-89 in nematodes is required for normal muscle cell architecture. In flies, it is necessary for the development of a symmetrical sarcomere in the flight muscles. Unc-89 proteins contain several adhesion and signaling domains including multiple copies of the immunoglobulin (Ig) domain, as well as fibronectin type III (FN3), SH3, RhoGEF, and PH domains. The nematode Unc-89 isoforms D, C, D, and F contain two kinase domain with B and F having two complete kinase domains while the first repeat of C and D are partial domains. Homology modeling suggests that the first kinase repeat of Unc-89 may be catalytically inactive, a pseudokinase, while the second kinase repeat may be active. The pseudokinase domain may function as a regulatory domain or a protein interaction domain. The Unc-89 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271011 [Multi-domain]  Cd Length: 255  Bit Score: 73.70  E-value: 1.42e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgiLKIADLGLSRaftvplKAYTHEIVTLWYRAPEV----LLGST 134
Cdd:cd14109   101 VAVFVRQLLLALKHMHDLGIAHLDLRPEDILLQDDK--LKLADFGQSR------RLLRGKLTTLIYGSPEFvspeIVNSY 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 135 HYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrllgtpTEQQWpgvmalrDWHVYPkWEPqdlsravpsLSPEG 214
Cdd:cd14109   173 PVTLATDMWSVGVLTYVLLGGISPFLGDNDRETLTNV-------RSGKW-------SFDSSP-LGN---------ISDDA 228
                         170       180
                  ....*....|....*....|....*..
gi 1063706111 215 IDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14109   229 RDFIKKLLVYIPESRLTVDEALNHPWF 255
STKc_SnRK2-3 cd14665
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
3-240 1.48e-15

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 2, group 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK2 is represented in this cd. SnRK2s are involved in plant response to abiotic stresses and abscisic acid (ABA)-dependent plant development. The SnRK2s subfamily is in turn classed into three subgroups, all 3 of which are represented in this CD. Group 1 comprises kinases not activated by ABA, group 2 - kinases not activated or activated very weakly by ABA (depending on plant species), and group 3 - kinases strongly activated by ABA. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271135 [Multi-domain]  Cd Length: 257  Bit Score: 73.87  E-value: 1.48e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKT-RLEMDEEDSHRKGSNPR----------------PLEASLVQ----- 60
Cdd:cd14665     1 RYELVKDIGSGNFGVARLMRDKQTKELVAVKYIeRGEKIDENVQREIINHRslrhpnivrfkeviltPTHLAIVMeyaag 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 ------------------RFMFQ-LFKGVAHCHSHGVLHRDLKPQNLLLDKDKGI-LKIADLGLSRAfTVPLKAYTHEIV 120
Cdd:cd14665    81 gelfericnagrfsedeaRFFFQqLISGVSYCHSMQICHRDLKLENTLLDGSPAPrLKICDFGYSKS-SVLHSQPKSTVG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSE---FQQLLHifRLLGtpteqqwpgvmalrdwhvypk 197
Cdd:cd14665   160 TPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEprnFRKTIQ--RILS--------------------- 216
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 198 wepqdLSRAVPS---LSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14665   217 -----VQYSIPDyvhISPECRHLISRIFVADPATRITIPEIRNHEW 257
STKc_STK25 cd06642
Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); ...
2-175 1.55e-15

Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). It is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may be involved in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270810 [Multi-domain]  Cd Length: 277  Bit Score: 73.94  E-value: 1.55e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED------------------------SHRKGSN------- 50
Cdd:cd06642     4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEiediqqeitvlsqcdspyitryygSYLKGTKlwiimey 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 -----------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYTHEI 119
Cdd:cd06642    84 lgggsaldllkPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL-SEQGDVKLADFGVAGQLTDTQIKRNTFV 162
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 120 VTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQalfPGDSEfqqlLHIFRLL 175
Cdd:cd06642   163 GTPFWMAPEVIKQSA-YDFKADIWSLGITAIELAKGE---PPNSD----LHPMRVL 210
PK_Tyr_Ser-Thr pfam07714
Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role ...
5-146 2.06e-15

Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyze the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyze the reverse process. Protein kinases fall into three broad classes, characterized with respect to substrate specificity; Serine/threonine-protein kinases, tyrosine-protein kinases, and dual specificity protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins). This entry represents the catalytic domain found in a number of serine/threonine- and tyrosine-protein kinases. It does not include the catalytic domain of dual specificity kinases.


Pssm-ID: 462242 [Multi-domain]  Cd Length: 258  Bit Score: 73.30  E-value: 2.06e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   5 EKLEKVGEGTYGKVYKA----MEKTTGKLVALKKTRLEMDEED--------------SH--------------------- 45
Cdd:pfam07714   2 TLGEKLGEGAFGEVYKGtlkgEGENTKIKVAVKTLKEGADEEEredfleeasimkklDHpnivkllgvctqgeplyivte 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 --RKGS-------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYT 116
Cdd:pfam07714  82 ymPGGDlldflrkHKRKLTLKDLLSMALQIAKGMEYLESKNFVHRDLAARNCLVSEN-LVVKISDFGLSRDIYDDDYYRK 160
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1063706111 117 HEIVTL---WYrAPEVLLGStHYSTAVDIWSVG 146
Cdd:pfam07714 161 RGGGKLpikWM-APESLKDG-KFTSKSDVWSFG 191
STKc_ULK1 cd14202
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 1; STKs catalyze the ...
52-242 2.27e-15

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK1 is required for efficient amino acid starvation-induced autophagy and mitochondrial clearance. It associates with three autophagy-related proteins (Atg13, FIP200 amd Atg101) to form the ULK1 complex. All fours proteins are essential for autophagosome formation. ULK1 is regulated by both mammalian target-of rapamycin complex 1 (mTORC1) and AMP-activated protein kinase (AMPK). mTORC1 negatively regulates the ULK1 complex in a nutrient-dependent manner while AMPK stimulates autophagy by inhibiting mTORC1. ULK1 also plays neuron-specific roles and is involved in non-clathrin-coated endocytosis in growth cones, filopodia extension, neurite extension, and axon branching. The ULK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271104 [Multi-domain]  Cd Length: 267  Bit Score: 73.51  E-value: 2.27e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG--------ILKIADLGLSRAFTVPLKAYTHeIVTLW 123
Cdd:cd14202    96 RTLSEDTIRLFLQQIAGAMKMLHSKGIIHRDLKPQNILLSYSGGrksnpnniRIKIADFGFARYLQNNMMAATL-CGSPM 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 124 YRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEfqQLLHIFrllgtpteqqwpgvmalrdwhvYPKwePQDL 203
Cdd:cd14202   175 YMAPEVIM-SQHYDAKADLWSIGTIIYQCLTGKAPFQASSP--QDLRLF----------------------YEK--NKSL 227
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1063706111 204 SRAVPSLSPEGI-DLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:cd14202   228 SPNIPRETSSHLrQLLLGLLQRNQKDRMDFDEFFHHPFLD 267
STKc_PIM2 cd14101
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
53-240 2.30e-15

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are three PIM2 isoforms resulting from alternative translation initiation sites. PIM2 is highly expressed in leukemia and lymphomas and has been shown to promote the survival and proliferation of tumor cells. The PIM2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271003 [Multi-domain]  Cd Length: 257  Bit Score: 73.34  E-value: 2.30e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGlSRAfTVPLKAYTHEIVTLWYRAPEVLLG 132
Cdd:cd14101   104 ALDESLARRFFKQVVEAVQHCHSKGVVHRDIKDENILVDLRTGDIKLIDFG-SGA-TLKDSMYTDFDGTRVYSPPEWILY 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 133 STHYSTAVDIWSVGCIFAEMIrrqalfPGDSEFQQllhifrllgtpteqqwpgvmalrdwhvypkwePQDLSRAVPS--- 209
Cdd:cd14101   182 HQYHALPATVWSLGILLYDMV------CGDIPFER--------------------------------DTDILKAKPSfnk 223
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1063706111 210 -LSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14101   224 rVSNDCRSLIRSCLAYNPSDRPSLEQILLHPW 255
STKc_TAK1 cd14058
Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated ...
10-233 2.49e-15

Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated Kinase-1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAK1 is also known as mitogen-activated protein kinase kinase kinase 7 (MAPKKK7 or MAP3K7), TAK, or MEKK7. As a MAPKKK, it is an important mediator of cellular responses to extracellular signals. It regulates both the c-Jun N-terminal kinase and p38 MAPK cascades by activating the MAPK kinases, MKK4 and MKK3/6. In addition, TAK1 plays diverse roles in immunity and development, in different biological contexts, through many signaling pathways including TGFbeta/BMP, Wnt/Fz, and NF-kB. It is also implicated in the activation of the tumor suppressor kinase, LKB1. The TAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270960 [Multi-domain]  Cd Length: 253  Bit Score: 73.24  E-value: 2.49e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAmeKTTGKLVALKKTRLEMDEED-----------SHRK------------------------------- 47
Cdd:cd14058     1 VGRGSFGVVCKA--RWRNQIVAVKIIESESEKKAfevevrqlsrvDHPNiiklygacsnqkpvclvmeyaeggslynvlh 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 GSNPRPL-EASLVQRFMFQLFKGVAHCHS---HGVLHRDLKPQNLLLDKDKGILKIADLGLSraftvpLKAYTHEIV--- 120
Cdd:cd14058    79 GKEPKPIyTAAHAMSWALQCAKGVAYLHSmkpKALIHRDLKPPNLLLTNGGTVLKICDFGTA------CDISTHMTNnkg 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGStHYSTAVDIWSVGCIFAEMIRRQALFPGdsefqqllhifrlLGTPTEQQWpgvmalrdWHVYPKWEP 200
Cdd:cd14058   153 SAAWMAPEVFEGS-KYSEKCDVFSWGIILWEVITRRKPFDH-------------IGGPAFRIM--------WAVHNGERP 210
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1063706111 201 qDLSRAVpslsPEGI-DLLTQMLKYNPAERISAK 233
Cdd:cd14058   211 -PLIKNC----PKPIeSLMTRCWSKDPEKRPSMK 239
STKc_STK33 cd14097
Catalytic domain of Serine/Threonine Kinase 33; STKs catalyze the transfer of the ...
66-240 2.84e-15

Catalytic domain of Serine/Threonine Kinase 33; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK33 is highly expressed in the testis and is present in low levels in most tissues. It may be involved in spermatogenesis and organ ontogenesis. It interacts with and phosphorylates vimentin and may be involved in regulating intermediate filament cytoskeletal dynamics. Its role in promoting the cell viability of KRAS-dependent cancer cells is under debate; some studies have found STK33 to promote cancer cell viability, while other studies have found it to be non-essential. KRAS is the most commonly mutated human oncogene, thus, studies on the role of STK33 in KRAS mutant cancer cells are important. The STK33 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270999 [Multi-domain]  Cd Length: 266  Bit Score: 72.97  E-value: 2.84e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 LFKGVAHCHSHGVLHRDLKPQNLLLDK------DKGILKIADLGLS-RAFTVPLKAYTHEIVTLWYRAPEVLlgSTH-YS 137
Cdd:cd14097   109 LASAVAYLHKNDIVHRDLKLENILVKSsiidnnDKLNIKVTDFGLSvQKYGLGEDMLQETCGTPIYMAPEVI--SAHgYS 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 138 TAVDIWSVGCIFAEMIRRQALFPGDSEfQQLLHIFRLLGTPTEQQwpgvmalrdwhvypKWEpqdlsravpSLSPEGIDL 217
Cdd:cd14097   187 QQCDIWSIGVIMYMLLCGEPPFVAKSE-EKLFEEIRKGDLTFTQS--------------VWQ---------SVSDAAKNV 242
                         170       180
                  ....*....|....*....|...
gi 1063706111 218 LTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14097   243 LQQLLKVDPAHRMTASELLDNPW 265
STKc_CRIK cd05601
Catalytic domain of the Serine/Threonine Kinase, Citron Rho-interacting kinase; STKs catalyze ...
53-245 2.96e-15

Catalytic domain of the Serine/Threonine Kinase, Citron Rho-interacting kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CRIK (also called citron kinase) is an effector of the small GTPase Rho. It plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. CRIK contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270752 [Multi-domain]  Cd Length: 328  Bit Score: 73.88  E-value: 2.96e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLG----LSRAFTVPLKAythEIVTLWYRAPE 128
Cdd:cd05601    98 IFEESMARFYLAELVLAIHSLHSMGYVHRDIKPENILIDR-TGHIKLADFGsaakLSSDKTVTSKM---PVGTPDYIAPE 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 129 VLL-----GSTHYSTAVDIWSVGCIFAEMIRRQALFPGD---SEFQQLLHIFRLLGTPTEqqwpgvmalrdwhvypkwep 200
Cdd:cd05601   174 VLTsmnggSKGTYGVECDWWSLGIVAYEMLYGKTPFTEDtviKTYSNIMNFKKFLKFPED-------------------- 233
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 201 qdlsravPSLSPEGIDLLTQMLKyNPAERISAKAALDHPYFDSLD 245
Cdd:cd05601   234 -------PKVSESAVDLIKGLLT-DAKERLGYEGLCCHPFFSGID 270
STKc_Aurora-B_like cd14117
Catalytic domain of the Serine/Threonine kinase, Aurora-B kinase and similar proteins; STKs ...
1-240 3.11e-15

Catalytic domain of the Serine/Threonine kinase, Aurora-B kinase and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). This subfamily includes Aurora-B and Aurora-C. Aurora-B is most active at the transition during metaphase to the end of mitosis. It associates with centromeres, relocates to the midzone of the central spindle, and concentrates at the midbody during cell division. It is critical for accurate chromosomal segregation, cytokinesis, protein localization to the centrosome and kinetochore, correct microtubule-kinetochore attachments, and regulation of the mitotic checkpoint. Aurora-C is mainly expressed in meiotically dividing cells; it was originally discovered in mice as a testis-specific STK called Aie1. Both Aurora-B and -C are chromosomal passenger proteins that can form complexes with INCENP and survivin, and they may have redundant cellular functions. INCENP participates in the activation of Aurora-B in a two-step process: first by binding to form an intermediate state of activation and the phosphorylation of its C-terminal TSS motif to generate the fully active kinase. The Aurora-B subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271019 [Multi-domain]  Cd Length: 270  Bit Score: 72.97  E-value: 3.11e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMD----------EEDSHRKGSN----------------- 50
Cdd:cd14117     5 IDDFDIGRPLGKGKFGNVYLAREKQSKFIVALKvlfKSQIEKEgvehqlrreiEIQSHLRHPNilrlynyfhdrkriyli 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 ----PRPLEASLVQR-----------FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSrAFTVPLKAY 115
Cdd:cd14117    85 leyaPRGELYKELQKhgrfdeqrtatFMEELADALHYCHEKKVIHRDIKPENLLMGY-KGELKIADFGWS-VHAPSLRRR 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THeIVTLWYRAPEVLLGSTHySTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtptEQQWPgvmalrdwhvy 195
Cdd:cd14117   163 TM-CGTLDYLPPEMIEGRTH-DEKVDLWCIGVLCYELLVGMPPFESASHTETYRRIVKV-----DLKFP----------- 224
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 196 pkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14117   225 ------------PFLSDGSRDLISKLLRYHPSERLPLKGVMEHPW 257
STKc_MAP4K5 cd06646
Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase ...
4-156 3.51e-15

Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270813 [Multi-domain]  Cd Length: 268  Bit Score: 72.75  E-value: 3.51e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE-------------MDEEDSHRK-----GSN--------------- 50
Cdd:cd06646    11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEpgddfsliqqeifMVKECKHCNivayfGSYlsreklwicmeycgg 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 ---------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYTHEIVT 121
Cdd:cd06646    91 gslqdiyhvTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL-TDNGDVKLADFGVAAKITATIAKRKSFIGT 169
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1063706111 122 LWYRAPEVLLGSTH--YSTAVDIWSVGCIFAEMIRRQ 156
Cdd:cd06646   170 PYWMAPEVAAVEKNggYNQLCDIWAVGITAIELAELQ 206
STKc_WNK cd13983
Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase; STKs catalyze ...
8-241 3.62e-15

Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNKs comprise a subfamily of STKs with an unusual placement of a catalytic lysine relative to all other protein kinases. They are critical in regulating ion balance and are thus, important components in the control of blood pressure. They are also involved in cell signaling, survival, proliferation, and organ development. WNKs are activated by hyperosmotic or low-chloride hypotonic stress and they function upstream of SPAK and OSR1 kinases, which regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. There are four vertebrate WNKs which show varying expression patterns. WNK1 and WNK2 are widely expressed while WNK3 and WNK4 show a more restricted expression pattern. Because mutations in human WNK1 and WNK4 cause PseudoHypoAldosteronism type II (PHAII), characterized by hypertension (due to increased sodium reabsorption) and hyperkalemia (due to impaired renal potassium secretion), there are more studies conducted on these two proteins, compared to WNK2 and WNK3. The WNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270885 [Multi-domain]  Cd Length: 258  Bit Score: 72.64  E-value: 3.62e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGKLVA---------LKKTRLEMDEEDS------H--------------------------- 45
Cdd:cd13983     7 EVLGRGSFKTVYRAFDTEEGIEVAwneiklrklPKAERQRFKQEIEilkslkHpniikfydsweskskkevifitelmts 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 -------RKGSNPRPleaSLVQRFMFQLFKGVAHCHSHG--VLHRDLKPQNLLLDKDKGILKIADLGLSrafTVPLKAYT 116
Cdd:cd13983    87 gtlkqylKRFKRLKL---KVIKSWCRQILEGLNYLHTRDppIIHRDLKCDNIFINGNTGEVKIGDLGLA---TLLRQSFA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIV-TLWYRAPEVLLGstHYSTAVDIWSVGCIFAEMIRRQALFpgdSEFQQLLHIFRLLGTpteqqwpGVMalrdwhvy 195
Cdd:cd13983   161 KSVIgTPEFMAPEMYEE--HYDEKVDIYAFGMCLLEMATGEYPY---SECTNAAQIYKKVTS-------GIK-------- 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 196 pkwePQDLSRAVpslSPEGIDLLTQMLKyNPAERISAKAALDHPYF 241
Cdd:cd13983   221 ----PESLSKVK---DPELKDFIEKCLK-PPDERPSARELLEHPFF 258
PKc_MKK5 cd06619
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
7-240 3.81e-15

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 5; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK5 (also called MEK5) is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132950 [Multi-domain]  Cd Length: 279  Bit Score: 72.99  E-value: 3.81e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   7 LEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE---------MDEEDSHRKGSNP-------------------------- 51
Cdd:cd06619     6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDitvelqkqiMSELEILYKCDSPyiigfygaffvenrisictefmdggs 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 ----RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPL-KAYtheIVTLWYRA 126
Cdd:cd06619    86 ldvyRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT-RGQVKLCDFGVSTQLVNSIaKTY---VGTNAYMA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 127 PEVLLGStHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPgvmalrdwhVYPkwepqdlsra 206
Cdd:cd06619   162 PERISGE-QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPP---------VLP---------- 221
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1063706111 207 VPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd06619   222 VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF 255
STKc_GRK7 cd05607
Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7; ...
52-153 4.11e-15

Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK7 (also called iodopsin kinase) belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270758 [Multi-domain]  Cd Length: 286  Bit Score: 73.01  E-value: 4.11e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLsrAFTVPL-KAYTHEIVTLWYRAPEVL 130
Cdd:cd05607    99 RGIEMERVIFYSAQITCGILHLHSLKIVYRDMKPENVLLD-DNGNCRLSDLGL--AVEVKEgKPITQRAGTNGYMAPEIL 175
                          90       100
                  ....*....|....*....|...
gi 1063706111 131 LGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd05607   176 KEES-YSYPVDWFAMGCSIYEMV 197
STKc_MST3 cd06641
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs ...
2-172 4.17e-15

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270809 [Multi-domain]  Cd Length: 277  Bit Score: 72.80  E-value: 4.17e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED------------------------SHRKGSN------- 50
Cdd:cd06641     4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEiediqqeitvlsqcdspyvtkyygSYLKDTKlwiimey 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 -----------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYTHEI 119
Cdd:cd06641    84 lgggsaldllePGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL-SEHGEVKLADFGVAGQLTDTQIKRN*FV 162
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 120 VTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQalfPGDSEFQQLLHIF 172
Cdd:cd06641   163 GTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGE---PPHSELHPMKVLF 211
STKc_nPKC_eta cd05590
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C eta; STKs catalyze the ...
10-245 4.18e-15

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C eta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-eta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270742 [Multi-domain]  Cd Length: 323  Bit Score: 73.40  E-value: 4.18e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEEDSHRKGSNPRPLEASLVQRFMFQLF-------------------- 67
Cdd:cd05590     3 LGKGSFGKVMLARLKESGRLYAVKvlKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYccfqtpdrlffvmefvnggd 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  68 ------------------------KGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLW 123
Cdd:cd05590    83 lmfhiqksrrfdeararfyaaeitSALMFLHDKGIIYRDLKLDNVLLDHE-GHCKLADFGMCKEGIFNGKTTSTFCGTPD 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 124 YRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrllgtpteqqwpgvmaLRDWHVYPKWepqdl 203
Cdd:cd05590   162 YIAPEI-LQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI-----------------LNDEVVYPTW----- 218
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 204 sravpsLSPEGIDLLTQMLKYNPAERISA------KAALDHPYFDSLD 245
Cdd:cd05590   219 ------LSQDAVDILKAFMTKNPTMRLGSltlggeEAILRHPFFKELD 260
STKc_Nek3 cd08219
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
3-236 4.22e-15

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173759 [Multi-domain]  Cd Length: 255  Bit Score: 72.31  E-value: 4.22e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEM---DEEDSHR------KGSNP------RPLEAS---------- 57
Cdd:cd08219     1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKsssAVEDSRKeavllaKMKHPnivafkESFEADghlyivmeyc 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  58 ----LVQRFMFQ---LFK-------------GVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTH 117
Cdd:cd08219    81 dggdLMQKIKLQrgkLFPedtilqwfvqmclGVQHIHEKRVLHRDIKSKNIFLTQN-GKVKLGDFGSARLLTSPGAYACT 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWpgvmalrdwhvypk 197
Cdd:cd08219   160 YVGTPYYVPPEI-WENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHY-------------- 224
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1063706111 198 wepqdlsravpslSPEGIDLLTQMLKYNPAERISAKAAL 236
Cdd:cd08219   225 -------------SYELRSLIKQMFKRNPRSRPSATTIL 250
STKc_MARK cd14072
Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases; ...
65-161 4.38e-15

Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MARKs, also called Partitioning-defective 1 (Par1) proteins, function as regulators of diverse cellular processes in nematodes, Drosophila, yeast, and vertebrates. They are involved in embryogenesis, epithelial cell polarization, cell signaling, and neuronal differentiation. MARKs phosphorylate tau and related microtubule-associated proteins (MAPs), and regulates microtubule-based intracellular transport. Vertebrates contain four isoforms, namely MARK1 (or Par1c), MARK2 (or Par1b), MARK3 (Par1a), and MARK4 (or MARKL1). Known substrates of MARKs include the cell cycle-regulating phosphatase Cdc25, tyrosine phosphatase PTPH1, MAPK scaffolding protein KSR1, class IIa histone deacetylases, and plakophilin 2. The MARK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270974 [Multi-domain]  Cd Length: 253  Bit Score: 72.55  E-value: 4.38e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYTHeIVTLWYRAPEVLLGSTHYSTAVDIWS 144
Cdd:cd14072   107 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNI-KIADFGFSNEFTPGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDVWS 184
                          90
                  ....*....|....*..
gi 1063706111 145 VGCIFAEMIRRQALFPG 161
Cdd:cd14072   185 LGVILYTLVSGSLPFDG 201
STKc_Nek4 cd08223
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
4-240 4.74e-15

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek4 is highly abundant in the testis. Its specific function is unknown. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is one in a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270862 [Multi-domain]  Cd Length: 257  Bit Score: 72.47  E-value: 4.74e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE-------------------------MDEEDS-------------- 44
Cdd:cd08223     2 YQFLRVIGKGSYGEVWLVRHKRDRKQYVIKKLNLKnaskrerkaaeqeakllsklkhpniVSYKESfegedgflyivmgf 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 -------HR-KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFTVPLKAYT 116
Cdd:cd08223    82 ceggdlyTRlKEQKGVLLEERQVVEWFVQIAMALQYMHERNILHRDLKTQNIFLTKSN-IIKVGDLGIARVLESSSDMAT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIVTLWYRAPEvLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGdSEFQQLlhIFRLLGTPTEQQwpgvmalrdwhvyP 196
Cdd:cd08223   161 TLIGTPYYMSPE-LFSNKPYNHKSDVWALGCCVYEMATLKHAFNA-KDMNSL--VYKILEGKLPPM-------------P 223
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 197 KwepqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd08223   224 K-----------QYSPELGELIKAMLHQDPEKRPSVKRILRQPY 256
STKc_MSK1_C cd14179
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
55-230 5.03e-15

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MSK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271081 [Multi-domain]  Cd Length: 310  Bit Score: 73.15  E-value: 5.03e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASlvqRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGILKIADLGLSR---AFTVPLKAythEIVTLWYRAPEv 129
Cdd:cd14179   103 EAS---HIMRKLVSAVSHMHDVGVVHRDLKPENLLFtdESDNSEIKIIDFGFARlkpPDNQPLKT---PCFTLHYAAPE- 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 130 LLGSTHYSTAVDIWSVGCIFAEMIRRQAlfPGDSEFQQLLHifrllgTPTEQqwpgvmalrdwhVYPKWEPQDLS---RA 206
Cdd:cd14179   176 LLNYNGYDESCDLWSLGVILYTMLSGQV--PFQCHDKSLTC------TSAEE------------IMKKIKQGDFSfegEA 235
                         170       180
                  ....*....|....*....|....
gi 1063706111 207 VPSLSPEGIDLLTQMLKYNPAERI 230
Cdd:cd14179   236 WKNVSQEAKDLIQGLLTVDPNKRI 259
STKc_MAPKAPK3 cd14172
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
55-240 5.41e-15

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 3 (MAPKAP3 or MK3) contains an N-terminal proline-rich region that can bind to SH3 domains, a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK3 is a bonafide substrate for the MAPK p38. It is closely related to MK2 and thus far, MK2/3 show indistinguishable substrate specificity. They are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. MK3 activity is only significant when MK2 is absent. The MK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271074 [Multi-domain]  Cd Length: 267  Bit Score: 72.33  E-value: 5.41e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVQRfmfQLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGILKIADLGLSRAFTVPlKAYTHEIVTLWYRAPEVlLG 132
Cdd:cd14172   104 EASEIMR---DIGTAIQYLHSMNIAHRDVKPENLLYtsKEKDAVLKLTDFGFAKETTVQ-NALQTPCYTPYYVAPEV-LG 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 133 STHYSTAVDIWSVGCIFAEMI---------RRQALFPGDSEFQQLlhifrllgtpTEQQWPGvmalrdwhvyPKWEpqdl 203
Cdd:cd14172   179 PEKYDKSCDMWSLGVIMYILLcgfppfysnTGQAISPGMKRRIRM----------GQYGFPN----------PEWA---- 234
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1063706111 204 sravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14172   235 -----EVSEEAKQLIRHLLKTDPTERMTITQFMNHPW 266
STKc_DCKL3 cd14185
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 3 (also called ...
66-240 5.97e-15

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 3 (also called Doublecortin-like and CAM kinase-like 3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL3 (or DCAMKL3) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. DCKL3 contains a single DCX domain (instead of a tandem) and a C-terminal kinase domain with similarity to CAMKs. It has been shown to interact with tubulin and JIP1/2. The DCKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271087 [Multi-domain]  Cd Length: 258  Bit Score: 72.29  E-value: 5.97e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 LFKGVAHCHSHGVLHRDLKPQNLLL----DKDKGiLKIADLGLSRAFTVPLKAYTHeivTLWYRAPEVLLGsTHYSTAVD 141
Cdd:cd14185   107 LCEALVYIHSKHIVHRDLKPENLLVqhnpDKSTT-LKLADFGLAKYVTGPIFTVCG---TPTYVAPEILSE-KGYGLEVD 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 142 IWSVGCIFaeMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPgvmalrdwhvyPKWEpqdlsravpSLSPEGIDLLTQM 221
Cdd:cd14185   182 MWAAGVIL--YILLCGFPPFRSPERDQEELFQIIQLGHYEFLP-----------PYWD---------NISEAAKDLISRL 239
                         170
                  ....*....|....*....
gi 1063706111 222 LKYNPAERISAKAALDHPY 240
Cdd:cd14185   240 LVVDPEKRYTAKQVLQHPW 258
STKc_MSK2_N cd05614
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
72-245 6.28e-15

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270765 [Multi-domain]  Cd Length: 332  Bit Score: 73.03  E-value: 6.28e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  72 HCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIV-TLWYRAPEVLLGSTHYSTAVDIWSVGCIFA 150
Cdd:cd05614   120 HLHKLGIVYRDIKLENILLDSE-GHVVLTDFGLSKEFLTEEKERTYSFCgTIEYMAPEIIRGKSGHGKAVDWWSLGILMF 198
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 151 EmirrqaLFPGDSEFQqllhifrLLGTPTEQQWPGVMALRDWHVYPkwepqdlsravPSLSPEGIDLLTQMLKYNPAERI 230
Cdd:cd05614   199 E------LLTGASPFT-------LEGEKNTQSEVSRRILKCDPPFP-----------SFIGPVARDLLQKLLCKDPKKRL 254
                         170       180
                  ....*....|....*....|
gi 1063706111 231 -----SAKAALDHPYFDSLD 245
Cdd:cd05614   255 gagpqGAQEIKEHPFFKGLD 274
PK_eIF2AK_GCN2_rpt1 cd14012
Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or ...
59-240 6.96e-15

Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: GCN2, protein kinase regulated by RNA (PKR), heme-regulated inhibitor kinase (HRI), and PKR-like endoplasmic reticulum kinase (PERK). GCN2 is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kappaB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. The degenerate pseudokinase domain of GCN2 may function as a regulatory domain. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270914 [Multi-domain]  Cd Length: 254  Bit Score: 72.01  E-value: 6.96e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDK--GILKIADLGLSRAF----TVPLKAYTHEivTLWyRAPEVLLG 132
Cdd:cd14012   106 ARRWTLQLLEALEYLHRNGVVHKSLHAGNVLLDRDAgtGIVKLTDYSLGKTLldmcSRGSLDEFKQ--TYW-LPPELAQG 182
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 133 STHYSTAVDIWSVGCIFAEMIrrqalfpgdsefqqllhifrllgtpteqqwPGVmalrdwHVYPKWEPQDLSRAVPSLSP 212
Cdd:cd14012   183 SKSPTRKTDVWDLGLLFLQML------------------------------FGL------DVLEKYTSPNPVLVSLDLSA 226
                         170       180
                  ....*....|....*....|....*...
gi 1063706111 213 EGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14012   227 SLQDFLSKCLSLDPKKRPTALELLPHEF 254
STKc_TLK cd13990
Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; STKs catalyze the ...
74-240 1.14e-14

Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TLKs play important functions during the cell cycle and are implicated in chromatin remodeling, DNA replication and repair, and mitosis. They phosphorylate and regulate Anti-silencing function 1 protein (Asf1), a histone H3/H4 chaperone that helps facilitate the assembly of chromatin following DNA replication during S phase. TLKs also phosphorylate the H3 histone tail and are essential in transcription. Vertebrates contain two subfamily members, TLK1 and TLK2. The TLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270892 [Multi-domain]  Cd Length: 279  Bit Score: 71.58  E-value: 1.14e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDKDK--GILKIADLGLSRAFTVPL-KAYTHEIV-----TLWYRAPEVLL---GSTHYSTAVDI 142
Cdd:cd13990   124 IKPPIIHYDLKPGNILLHSGNvsGEIKITDFGLSKIMDDESyNSDGMELTsqgagTYWYLPPECFVvgkTPPKISSKVDV 203
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 143 WSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTpTEQQWPgvmalrdwhvypkwepqdlsrAVPSLSPEGIDLLTQML 222
Cdd:cd13990   204 WSVGVIFYQMLYGRKPFGHNQSQEAILEENTILKA-TEVEFP---------------------SKPVVSSEAKDFIRRCL 261
                         170
                  ....*....|....*...
gi 1063706111 223 KYNPAERISAKAALDHPY 240
Cdd:cd13990   262 TYRKEDRPDVLQLANDPY 279
STKc_PKA_like cd05580
Catalytic subunit of the Serine/Threonine Kinases, cAMP-dependent protein kinases; STKs ...
4-153 1.20e-14

Catalytic subunit of the Serine/Threonine Kinases, cAMP-dependent protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the cAMP-dependent protein kinases, PKA and PRKX, and similar proteins. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. PRKX is also reulated by the R subunit and is is present in many tissues including fetal and adult brain, kidney, and lung. It is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. The PKA-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270732 [Multi-domain]  Cd Length: 290  Bit Score: 71.46  E-value: 1.20e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTR-LEMDEED---SHRK--------------GSNPRPLEASLVQRF 62
Cdd:cd05580     3 FEFLKTLGTGSFGRVRLVKHKDSGKYYALKilkKAKiIKLKQVEhvlNEKRilsevrhpfivnllGSFQDDRNLYMVMEY 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 -----MFQLFK-------GVA------------HCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRafTVPLKAY--- 115
Cdd:cd05580    83 vpggeLFSLLRrsgrfpnDVAkfyaaevvlaleYLHSLDIVYRDLKPENLLLDSD-GHIKITDFGFAK--RVKDRTYtlc 159
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1063706111 116 -THEivtlwYRAPEVLLGSTHySTAVDIWSVGCIFAEMI 153
Cdd:cd05580   160 gTPE-----YLAPEIILSKGH-GKAVDWWALGILIYEML 192
STKc_PRKX_like cd05612
Catalytic domain of PRKX-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of ...
4-165 1.21e-14

Catalytic domain of PRKX-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. The PRKX-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270763 [Multi-domain]  Cd Length: 292  Bit Score: 71.70  E-value: 1.21e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKK------TRLEMDEEDSHRKG-----SNP---RPLEASLVQRFMFQLFKG 69
Cdd:cd05612     3 FERIKTIGTGTFGRVHLVRDRISEHYYALKVmaipevIRLKQEQHVHNEKRvlkevSHPfiiRLFWTEHDQRFLYMLMEY 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  70 VA-------------------------------HCHSHGVLHRDLKPQNLLLDKDkGILKIADLGlsraFTVPLKAYTHE 118
Cdd:cd05612    83 VPggelfsylrnsgrfsnstglfyaseivcaleYLHSKEIVYRDLKPENILLDKE-GHIKLTDFG----FAKKLRDRTWT 157
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 119 IV-TLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEF 165
Cdd:cd05612   158 LCgTPEYLAPEV-IQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF 204
STKc_PIM1 cd14100
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
7-190 1.22e-14

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are two PIM1 isoforms resulting from alternative translation initiation sites. PIM1 is the founding member of the PIM subfamily. It is involved in regulating cell growth, differentiation, and apoptosis. It promotes cancer development when overexpressed by inhibiting apoptosis, promoting cell proliferation, and promoting genomic instability. The PIM1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271002 [Multi-domain]  Cd Length: 254  Bit Score: 71.15  E-value: 1.22e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   7 LEKVGEGTYG--KVYKAMEKTTGKLVALKKTRLEMDEED-SHRKGSnprpLEASLVQRFMFQLFKGVAHCHSHGVLHRDL 83
Cdd:cd14100    57 LKKVGSGFRGviRLLDWFERPDSFVLVLERPEPVQDLFDfITERGA----LPEELARSFFRQVLEAVRHCHNCGVLHRDI 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  84 KPQNLLLDKDKGILKIADLGlSRAFtvpLK--AYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPG 161
Cdd:cd14100   133 KDENILIDLNTGELKLIDFG-SGAL---LKdtVYTDFDGTRVYSPPEWIRFHRYHGRSAAVWSLGILLYDMVCGDIPFEH 208
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1063706111 162 DSEFQQLLHIFRLLGTPTEQQ---WpgVMALR 190
Cdd:cd14100   209 DEEIIRGQVFFRQRVSSECQHlikW--CLALR 238
STKc_EIF2AK1_HRI cd14049
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
3-218 1.26e-14

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 2 or Heme-Regulated Inhibitor kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HRI (or EIF2AK1) contains an N-terminal regulatory heme-binding domain and a C-terminal catalytic kinase domain. It is suppressed under normal conditions by binding of the heme iron, and is activated during heme deficiency. It functions as a critical regulator that ensures balanced synthesis of globins and heme, in order to form stable hemoglobin during erythroid differentiation and maturation. HRI also protects cells and enhances survival under iron-deficient conditions. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The HRI subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270951 [Multi-domain]  Cd Length: 284  Bit Score: 71.38  E-value: 1.26e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE-------------------------------------------- 38
Cdd:cd14049     7 EFEEIARLGKGGYGKVYKVRNKLDGQYYAIKKILIKkvtkrdcmkvlrevkvlaglqhpnivgyhtawmehvqlmlyiqm 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  39 ----------MDEEDSH-----RKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLG 103
Cdd:cd14049    87 qlcelslwdwIVERNKRpceeeFKSAPYTPVDVDVTTKILQQLLEGVTYIHSMGIVHRDLKPRNIFLHGSDIHVRIGDFG 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 104 LS----------RAFTVPLKAYTHE--IVTLWYRAPEVLLGStHYSTAVDIWSVGCIFAEMirrqaLFPGDSEFQQLlhi 171
Cdd:cd14049   167 LAcpdilqdgndSTTMSRLNGLTHTsgVGTCLYAAPEQLEGS-HYDFKSDMYSIGVILLEL-----FQPFGTEMERA--- 237
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 172 fRLLGTPTEQQWPGVMALRdWHVYPKWePQDLSRAVPSLSPEGIDLL 218
Cdd:cd14049   238 -EVLTQLRNGQIPKSLCKR-WPVQAKY-IKLLTSTEPSERPSASQLL 281
STKc_MAPKAPK cd14089
Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase-activated ...
55-148 1.32e-14

Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase-activated protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPK-activated protein kinases MK2, MK3, MK5 (also called PRAK for p38-regulated/activated protein kinase), and related proteins. These proteins contain a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. In addition, MK2 and MK3 contain an N-terminal proline-rich region that can bind to SH3 domains. MK2 and MK3 are bonafide substrates for the MAPK p38, while MK5 plays a functional role in the p38 MAPK pathway although their direct interaction has been difficult to detect. MK2 and MK3 are closely related and show, thus far, indistinguishable substrate specificity, while MK5 shows a distinct spectrum of substrates. MK2 and MK3 are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. MK5 is a ubiquitous protein that is implicated in neuronal morphogenesis, cell migration, and tumor angiogenesis. It interacts with PKA, which induces cytoplasmic translocation of MK5. Its substrates includes p53, ERK3/4, Hsp27, and cytosolic phospholipase A2 (cPLA2). The MAPKAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270991 [Multi-domain]  Cd Length: 263  Bit Score: 71.17  E-value: 1.32e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVqrfMFQLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGILKIADLGLSRaftvplkaYTHEIVTL-------WYR 125
Cdd:cd14089   101 EAAEI---MRQIGSAVAHLHSMNIAHRDLKPENLLYssKGPNAILKLTDFGFAK--------ETTTKKSLqtpcytpYYV 169
                          90       100
                  ....*....|....*....|...
gi 1063706111 126 APEVlLGSTHYSTAVDIWSVGCI 148
Cdd:cd14089   170 APEV-LGPEKYDKSCDMWSLGVI 191
STKc_Twitchin_like cd14114
The catalytic domain of the Giant Serine/Threonine Kinases, Twitchin and Projectin; STKs ...
1-241 1.70e-14

The catalytic domain of the Giant Serine/Threonine Kinases, Twitchin and Projectin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Caenorhabditis elegans and Aplysia californica Twitchin, Drosophila melanogaster Projectin, and similar proteins. These are very large muscle proteins containing multiple immunoglobulin (Ig)-like and fibronectin type III (FN3) domains and a single kinase domain near the C-terminus. Twitchin and Projectin are both associated with thick filaments. Twitchin is localized in the outer parts of A-bands and is involved in regulating muscle contraction. It interacts with the myofibrillar proteins myosin and actin in a phosphorylation-dependent manner, and may be involved in regulating the myosin cross-bridge cycle. The kinase activity of Twitchen is activated by Ca2+ and the Ca2+ binding protein S100A1. Projectin is associated with the end of thick filaments and is a component of flight muscle connecting filaments. The kinase domain of Projectin may play roles in autophosphorylation and transphosphorylation, which impact the formation of myosin filaments. The Twitchin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271016 [Multi-domain]  Cd Length: 259  Bit Score: 70.69  E-value: 1.70e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEEDSHRKGSNPRPL------------------------ 54
Cdd:cd14114     1 YDHYDILEELGTGAFGVVHRCTERATGNNFAAKfiMTPHESDKETVRKEIQIMNQLhhpklinlhdafeddnemvlilef 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 ------------------EASLVQrFMFQLFKGVAHCHSHGVLHRDLKPQNLLLD-KDKGILKIADLGLSRAFTvPLKAY 115
Cdd:cd14114    81 lsggelferiaaehykmsEAEVIN-YMRQVCEGLCHMHENNIVHLDIKPENIMCTtKRSNEVKLIDFGLATHLD-PKESV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVTLWYRAPEVLLGS-THYSTavDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtpteqqwpgvmalrDWHV 194
Cdd:cd14114   159 KVTTGTAEFAAPEIVEREpVGFYT--DMWAVGVLSYVLLSGLSPFAGENDDETLRNVKSC----------------DWNF 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 195 ypkwepqDLSrAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14114   221 -------DDS-AFSGISEEAKDFIRKLLLADPNKRMTIHQALEHPWL 259
STKc_16 cd13986
Catalytic domain of Serine/Threonine Kinase 16; STKs catalyze the transfer of the ...
4-245 1.75e-14

Catalytic domain of Serine/Threonine Kinase 16; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK16 is associated with many names including Myristylated and Palmitylated Serine/threonine Kinase 1 (MPSK1), Kinase related to cerevisiae and thaliana (Krct), and Protein Kinase expressed in day 12 fetal liver (PKL12). It is widely expressed in mammals with highest levels found in liver, testis, and kidney. It is localized in the Golgi but is translocated to the nucleus upon disorganization of the Golgi. STK16 is constitutively active and is capable of phosphorylating itself and other substrates. It may be involved in regulating stromal-epithelial interactions during mammary gland ductal morphogenesis. It may also function as a transcriptional co-activator of type-C natriuretic peptide and VEGF. The STK16 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270888 [Multi-domain]  Cd Length: 282  Bit Score: 71.17  E-value: 1.75e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR--------LEMDEEDSHRKGSNP---RPLEASLVQR----------- 61
Cdd:cd13986     2 YRIQRLLGEGGFSFVYLVEDLSTGRLYALKKILchskedvkEAMREIENYRLFNHPnilRLLDSQIVKEaggkkevylll 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 -----------------------------FMFQLFKGVAHCHSH---GVLHRDLKPQNLLLDKDKGILkIADLG---LSR 106
Cdd:cd13986    82 pyykrgslqdeierrlvkgtffpedrilhIFLGICRGLKAMHEPelvPYAHRDIKPGNVLLSEDDEPI-LMDLGsmnPAR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 107 AFTV------PLKAYTHEIVTLWYRAPE---VLLGSThYSTAVDIWSVGCIFAEMIRRQAlfPGDSEFQQllhifrllGT 177
Cdd:cd13986   161 IEIEgrrealALQDWAAEHCTMPYRAPElfdVKSHCT-IDEKTDIWSLGCTLYALMYGES--PFERIFQK--------GD 229
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063706111 178 PTEQqwpGVMAlrdwhvyPKWEPQDLSRavpsLSPEGIDLLTQMLKYNPAERISAKAALDHpyFDSLD 245
Cdd:cd13986   230 SLAL---AVLS-------GNYSFPDNSR----YSEELHQLVKSMLVVNPAERPSIDDLLSR--VHDLI 281
STKc_GRK5 cd05632
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5; STKs ...
69-164 1.76e-14

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270780 [Multi-domain]  Cd Length: 313  Bit Score: 71.54  E-value: 1.76e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLsrAFTVPL-KAYTHEIVTLWYRAPEVlLGSTHYSTAVDIWSVGC 147
Cdd:cd05632   116 GLEDLHRENTVYRDLKPENILLD-DYGHIRISDLGL--AVKIPEgESIRGRVGTVGYMAPEV-LNNQRYTLSPDYWGLGC 191
                          90
                  ....*....|....*..
gi 1063706111 148 IFAEMIRRQALFPGDSE 164
Cdd:cd05632   192 LIYEMIEGQSPFRGRKE 208
STKc_MAP4K4_6_N cd06636
N-terminal Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase ...
4-152 1.85e-14

N-terminal Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. The MAP4K4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270806 [Multi-domain]  Cd Length: 282  Bit Score: 71.19  E-value: 1.85e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDS-------------HR------------------------ 46
Cdd:cd06636    18 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEikleinmlkkyshHRniatyygafikksppghddqlwlv 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 -------------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLK 113
Cdd:cd06636    98 mefcgagsvtdlvKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEV-KLVDFGVSAQLDRTVG 176
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 114 AYTHEIVTLWYRAPEVLLGSTH----YSTAVDIWSVGCIFAEM 152
Cdd:cd06636   177 RRNTFIGTPYWMAPEVIACDENpdatYDYRSDIWSLGITAIEM 219
STKc_TAO cd06607
Catalytic domain of the Serine/Threonine Kinases, Thousand-and-One Amino acids proteins; STKs ...
2-240 1.90e-14

Catalytic domain of the Serine/Threonine Kinases, Thousand-and-One Amino acids proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270784 [Multi-domain]  Cd Length: 258  Bit Score: 70.56  E-value: 1.90e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR------------------------------------------LEM 39
Cdd:cd06607     1 KIFEDLREIGHGSFGAVYYARNKRTSEVVAIKKMSysgkqstekwqdiikevkflrqlrhpntieykgcylrehtawLVM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  40 --------DEEDSHRKgsnprPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGlSRAFTVP 111
Cdd:cd06607    81 eyclgsasDIVEVHKK-----PLQEVEIAAICHGALQGLAYLHSHNRIHRDVKAGNILL-TEPGTVKLADFG-SASLVCP 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 112 LKAYtheIVTLWYRAPEVLLG--STHYSTAVDIWSVG--CI-FAEmiRRQALFPGDSeFQQLLHIfrllgtptEQQWPGV 186
Cdd:cd06607   154 ANSF---VGTPYWMAPEVILAmdEGQYDGKVDVWSLGitCIeLAE--RKPPLFNMNA-MSALYHI--------AQNDSPT 219
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 187 MALRDWhvypkwepqdlsravpslSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd06607   220 LSSGEW------------------SDDFRNFVDSCLQKIPQDRPSAEDLLKHPF 255
STKc_ULK2 cd14201
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 2; STKs catalyze the ...
54-242 1.93e-14

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK2 is ubiquitously expressed and is essential in autophagy induction. It displays partially redundant functions with ULK1 and is able to compensate for the loss of ULK1 in non-selective autophagy. It also displays neuron-specific functions and is important in axon development. The ULK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271103 [Multi-domain]  Cd Length: 271  Bit Score: 70.81  E-value: 1.93e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL---DKDK----GI-LKIADLGLSRAFTVPLKAYTHeIVTLWYR 125
Cdd:cd14201   102 LSEDTIRVFLQQIAAAMRILHSKGIIHRDLKPQNILLsyaSRKKssvsGIrIKIADFGFARYLQSNMMAATL-CGSPMYM 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 126 APEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEfqQLLHIFrllgtpteqqwpgvmalrdwhvYPKwePQDLSR 205
Cdd:cd14201   181 APEVIM-SQHYDAKADLWSIGTVIYQCLVGKPPFQANSP--QDLRMF----------------------YEK--NKNLQP 233
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1063706111 206 AVPS-LSPEGIDLLTQMLKYNPAERISAKAALDHPYFD 242
Cdd:cd14201   234 SIPReTSPYLADLLLGLLQRNQKDRMDFEAFFSHPFLE 271
STKc_obscurin_rpt1 cd14107
Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs ...
4-241 2.78e-14

Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Obscurin, approximately 800 kDa in size, is one of three giant proteins expressed in vetebrate striated muscle, together with titin and nebulin. It is a multidomain protein composed of tandem adhesion and signaling domains, including 49 immunoglobulin (Ig) and 2 fibronectin type III (FN3) domains at the N-terminus followed by a more complex region containing more Ig domains, a conserved SH3 domain near a RhoGEF and PH domains, non-modular regions, as well as IQ and phosphorylation motifs. The obscurin gene also encode two kinase domains, which are not expressed as part of the 800 kDa protein, but as a smaller, alternatively spliced product present mainly in the heart muscle, also called obscurin-MLCK. Obscurin is localized at the peripheries of Z-disks and M-lines, where it is able to communicate with the surrounding myoplasm. It interacts with diverse proteins including sAnk1, myosin, titin, and MyBP-C. It may act as a scaffold for the assembly of elements of the contractile apparatus. The obscurin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271009 [Multi-domain]  Cd Length: 257  Bit Score: 70.30  E-value: 2.78e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK------KTRLEMDEED------SHRK-------GSNPRPL---------- 54
Cdd:cd14107     4 YEVKEEIGRGTFGFVKRVTHKGNGECCAAKfiplrsSTRARAFQERdilarlSHRRltclldqFETRKTLililelcsse 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 -------------EASlVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGLSRAFTvPLKAYTHEIV 120
Cdd:cd14107    84 elldrlflkgvvtEAE-VKLYIQQVLEGIGYLHGMNILHLDIKPDNILMvSPTREDIKICDFGFAQEIT-PSEHQFSKYG 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRllgtpteqqwpGVMAlrdwhvypkWEP 200
Cdd:cd14107   162 SPEFVAPEIVHQEP-VSAATDIWALGVIAYLSLTCHSPFAGENDRATLLNVAE-----------GVVS---------WDT 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 201 QDLSravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14107   221 PEIT----HLSEDAKDFIKRVLQPDPEKRPSASECLSHEWF 257
STKc_MAP4K3 cd06645
Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase ...
2-156 2.94e-14

Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. MAP4Ks are involved in MAPK signaling pathways by activating a MAPK kinase kinase. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270812 [Multi-domain]  Cd Length: 272  Bit Score: 70.46  E-value: 2.94e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE-------------MDEEDSHRK-----GSNPR----------- 52
Cdd:cd06645    11 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEpgedfavvqqeiiMMKDCKHSNivayfGSYLRrdklwicmefc 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 -------------PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYTHEI 119
Cdd:cd06645    91 gggslqdiyhvtgPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL-TDNGHVKLADFGVSAQITATIAKRKSFI 169
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1063706111 120 VTLWYRAPEVLLGSTH--YSTAVDIWSVGCIFAEMIRRQ 156
Cdd:cd06645   170 GTPYWMAPEVAAVERKggYNQLCDIWAVGITAIELAELQ 208
STKc_TSSK3-like cd14163
Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins; STKs ...
17-169 2.98e-14

Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK3 has been reported to be expressed in the interstitial Leydig cells of adult testis. Its mRNA levels is low at birth, increases at puberty, and remains high throughout adulthood. The TSSK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271065 [Multi-domain]  Cd Length: 257  Bit Score: 70.02  E-value: 2.98e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  17 KVYKAMEKTTGKLVALKKTRLEMDEEDSHRKGSnprPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgi 96
Cdd:cd14163    64 HVYEMLESADGKIYLVMELAEDGDVFDCVLHGG---PLPEHRAKALFRQLVEAIRYCHGCGVAHRDLKCENALLQGFT-- 138
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063706111  97 LKIADLGLSRAFTVPLKAYTHEIV-TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFpGDSEFQQLL 169
Cdd:cd14163   139 LKLTDFGFAKQLPKGGRELSQTFCgSTAYAAPEVLQGVPHDSRKGDIWSMGVVLYVMLCAQLPF-DDTDIPKML 211
PTKc_Jak_rpt2 cd05038
Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily ...
6-152 3.49e-14

Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. They are PTKs, catalyzing the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jaks are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. The Jak subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270634 [Multi-domain]  Cd Length: 284  Bit Score: 70.10  E-value: 3.49e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   6 KLEKVGEGTYGKVYKA----MEKTTGKLVALKKTRLEMDE----------------------------EDSHRK------ 47
Cdd:cd05038     8 FIKQLGEGHFGSVELCrydpLGDNTGEQVAVKSLQPSGEEqhmsdfkreieilrtldheyivkykgvcESPGRRslrlim 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 -----GS-------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAY 115
Cdd:cd05038    88 eylpsGSlrdylqrHRDQIDLKRLLLFASQICKGMEYLGSQRYIHRDLAARNILVESEDLV-KISDFGLAKVLPEDKEYY 166
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 116 T----HEIVTLWYrAPEVLLGSTHYStAVDIWSVGCIFAEM 152
Cdd:cd05038   167 YvkepGESPIFWY-APECLRESRFSS-ASDVWSFGVTLYEL 205
PKc_MKK3_6 cd06617
Catalytic domain of the dual-specificity Protein Kinases, Mitogen-activated protein Kinase ...
5-241 3.53e-14

Catalytic domain of the dual-specificity Protein Kinases, Mitogen-activated protein Kinase Kinases 3 and 6; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 play roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. The MKK3/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173729 [Multi-domain]  Cd Length: 283  Bit Score: 70.15  E-value: 3.53e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   5 EKLEKVGEGTYGKVYKAMEKTTGKLVALKKT----------RLEMDEEDSHRKGSNP----------------------- 51
Cdd:cd06617     4 EVIEELGRGAYGVVDKMRHVPTGTIMAVKRIratvnsqeqkRLLMDLDISMRSVDCPytvtfygalfregdvwicmevmd 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 --------------RPLEASLVQRFMFQLFKGVAHCHSH-GVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLkAYT 116
Cdd:cd06617    84 tsldkfykkvydkgLTIPEDILGKIAVSIVKALEYLHSKlSVIHRDVKPSNVLINR-NGQVKLCDFGISGYLVDSV-AKT 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 HEIVTLWYRAPEVLLGST---HYSTAVDIWSVGCIFAEM-IRRqalFPGDSefqqllhifrlLGTPTEQQwpgvmalrdw 192
Cdd:cd06617   162 IDAGCKPYMAPERINPELnqkGYDVKSDVWSLGITMIELaTGR---FPYDS-----------WKTPFQQL---------- 217
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 193 hvypKWEPQDLSRAVP--SLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06617   218 ----KQVVEEPSPQLPaeKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFF 264
STKc_Nek7 cd08229
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
52-162 4.94e-14

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270866 [Multi-domain]  Cd Length: 292  Bit Score: 70.06  E-value: 4.94e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEvLL 131
Cdd:cd08229   123 RLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE-RI 200
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1063706111 132 GSTHYSTAVDIWSVGCIFAEMIRRQALFPGD 162
Cdd:cd08229   201 HENGYNFKSDIWSLGCLLYEMAALQSPFYGD 231
STKc_PAK2 cd06655
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 2; STKs catalyze the ...
2-241 5.35e-14

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. It belongs to the group I PAKs, which contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132986 [Multi-domain]  Cd Length: 296  Bit Score: 70.14  E-value: 5.35e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLE--------MDEEDSHRKGSNPRP---LEASLVQRFMF------ 64
Cdd:cd06655    19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQkqpkkeliINEILVMKELKNPNIvnfLDSFLVGDELFvvmeyl 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 ------------------------QLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIV 120
Cdd:cd06655    99 aggsltdvvtetcmdeaqiaavcrECLQALEFLHANQVIHRDIKSDNVLLGMD-GSVKLTDFGFCAQITPEQSKRSTMVG 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLlHIFRLLGTPTEQQwpgvmalrdwhvypkweP 200
Cdd:cd06655   178 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLIATNGTPELQN-----------------P 238
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 201 QdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06655   239 E-------KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 272
STKc_Sck1_like cd05586
Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Serine/Threonine ...
10-152 6.33e-14

Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Sck1 and similar fungal proteins. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270738 [Multi-domain]  Cd Length: 330  Bit Score: 69.91  E-value: 6.33e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDSHRKG---------------------SNPRPLEASLVQRFM-- 63
Cdd:cd05586     1 IGKGTFGQVYQVRKKDTRRIYAMKvlsKKVIVAKKEVAHTIGernilvrtaldespfivglkfSFQTPTDLYLVTDYMsg 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 ----------------------FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVT 121
Cdd:cd05586    81 gelfwhlqkegrfsedrakfyiAELVLALEHLHKNDIVYRDLKPENILLDAN-GHIALCDFGLSKADLTDNKTTNTFCGT 159
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1063706111 122 LWYRAPEVLLGSTHYSTAVDIWSVGCIFAEM 152
Cdd:cd05586   160 TEYLAPEVLLDEKGYTKMVDFWSLGVLVFEM 190
STKc_TAO3 cd06633
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 3; STKs catalyze ...
2-171 6.76e-14

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO3 is also known as JIK (c-Jun N-terminal kinase inhibitory kinase) or KFC (kinase from chicken). It specifically activates JNK, presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The TAO3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270803 [Multi-domain]  Cd Length: 313  Bit Score: 69.68  E-value: 6.76e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKtrLEMDEEDSHRK---------------------------------- 47
Cdd:cd06633    21 EIFVDLHEIGHGSFGAVYFATNSHTNEVVAIKK--MSYSGKQTNEKwqdiikevkflqqlkhpntieykgcylkdhtawl 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 ------GS-------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGlSRAFTVPLKA 114
Cdd:cd06633    99 vmeyclGSasdllevHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL-TEPGQVKLADFG-SASIASPANS 176
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1063706111 115 YtheIVTLWYRAPEVLLG--STHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHI 171
Cdd:cd06633   177 F---VGTPYWMAPEVILAmdEGQYDGKVDIWSLGITCIELAERKPPLFNMNAMSALYHI 232
STKc_RSK4_C cd14177
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 4 (also called ...
2-246 7.44e-14

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 4 (also called Ribosomal protein S6 kinase alpha-6 or 90kDa ribosomal protein S6 kinase 6); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK4 is also called S6K-alpha-6, RPS6KA6, p90RSK6 or pp90RSK4. RSK4 is a substrate of ERK and is a modulator of p53-dependent proliferation arrest in human cells. Deletion of the RSK4 gene, RPS6KA6, frequently occurs in patients of X-linked deafness type 3, mental retardation and choroideremia. Studies of RSK4 in cancer cells and tissues suggest that it may be oncogenic or tumor suppressive depending on many factors. RSK4 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271079 [Multi-domain]  Cd Length: 295  Bit Score: 69.66  E-value: 7.44e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDS--HRKGSNP------------------------- 51
Cdd:cd14177     4 DVYELKEDIGVGSYSVCKRCIHRATNMEFAVKiidKSKRDPSEEIEilMRYGQHPniitlkdvyddgryvylvtelmkgg 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRF---------MFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG---ILKIADLGLSRAFTVPLKAYTHEI 119
Cdd:cd14177    84 ELLDRILRQKFfsereasavLYTITKTVDYLHCQGVVHRDLKPSNILYMDDSAnadSIRICDFGFAKQLRGENGLLLTPC 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 120 VTLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALF---PGDSEFQQLLHI----FRLLGTpteqqwpgvmalrdw 192
Cdd:cd14177   164 YTANFVAPEVLM-RQGYDAACDIWSLGVLLYTMLAGYTPFangPNDTPEEILLRIgsgkFSLSGG--------------- 227
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 193 hvypKWEpqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSLDK 246
Cdd:cd14177   228 ----NWD---------TVSDAAKDLLSHMLHVDPHQRYTAEQVLKHSWIACRDQ 268
STKc_RSK2_C cd14176
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 2 (also called ...
2-249 9.51e-14

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 2 (also called 90kDa ribosomal protein S6 kinase 3 or Ribosomal protein S6 kinase alpha-3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK2 is also called p90RSK3, RPS6KA3, S6K-alpha-3, or MAPK-activated protein kinase 1b (MAPKAPK-1b). RSK2 is expressed highly in the regions of the brain with high synaptic activity. It plays a role in the maintenance and consolidation of excitatory synapses. It is a specific modulator of phospholipase D in calcium-regulated exocytosis. Mutations in the RSK2 gene, RPS6KA3, cause Coffin-Lowry syndrome (CLS), a rare syndromic form of X-linked mental retardation characterized by growth and psychomotor retardation and skeletal abnormalities. RSK2 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271078 [Multi-domain]  Cd Length: 339  Bit Score: 69.66  E-value: 9.51e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDS--HRKGSNP------------------------- 51
Cdd:cd14176    19 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKiidKSKRDPTEEIEilLRYGQHPniitlkdvyddgkyvyvvtelmkgg 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRF---------MFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG---ILKIADLGLSRAFTVPLKAYTHEI 119
Cdd:cd14176    99 ELLDKILRQKFfsereasavLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGnpeSIRICDFGFAKQLRAENGLLMTPC 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 120 VTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALF---PGDSEFQQLLHI----FRLLGTpteqqwpgvmalrdw 192
Cdd:cd14176   179 YTANFVAPEV-LERQGYDAACDIWSLGVLLYTMLTGYTPFangPDDTPEEILARIgsgkFSLSGG--------------- 242
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 193 hvypKWEpqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF---DSLDKSQF 249
Cdd:cd14176   243 ----YWN---------SVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIvhwDQLPQYQL 289
PKc_MEK1 cd06650
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP) ...
2-248 1.21e-13

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase 1; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MEK1 is a dual-specificity PK and a MAPK kinase (MAPKK or MKK) that phosphorylates and activates the downstream targets, ERK1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270816 [Multi-domain]  Cd Length: 319  Bit Score: 69.31  E-value: 1.21e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEM--------------------------------DEEDS----H 45
Cdd:cd06650     5 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIkpairnqiirelqvlhecnspyivgfygafysDGEISicmeH 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 RKGSN-------PRPLEASLVQRFMFQLFKGVAHC-HSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFtvpLKAYTH 117
Cdd:cd06650    85 MDGGSldqvlkkAGRIPEQILGKVSIAVIKGLTYLrEKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQL---IDSMAN 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIV-TLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEM-IRRQALFPGDSEFQQLLHIFRLLGTPTEQ----QWPG------ 185
Cdd:cd06650   161 SFVgTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMaVGRYPIPPPDAKELELMFGCQVEGDAAETpprpRTPGrplssy 239
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 186 ------VMALRDWHVYPKWEPQDlsrAVPS--LSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSLDKSQ 248
Cdd:cd06650   240 gmdsrpPMAIFELLDYIVNEPPP---KLPSgvFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEE 307
STKc_ASK cd06624
Catalytic domain of the Serine/Threonine Kinase, Apoptosis signal-regulating kinase; STKs ...
5-152 1.27e-13

Catalytic domain of the Serine/Threonine Kinase, Apoptosis signal-regulating kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs) and include ASK1, ASK2, and MAPKKK15. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270794 [Multi-domain]  Cd Length: 268  Bit Score: 68.59  E-value: 1.27e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   5 EKLEKV--GEGTYGKVYKAMEKTTGKLVALKktrlEMDEEDShrkgSNPRPLE-----------ASLVQR---------- 61
Cdd:cd06624     9 ESGERVvlGKGTFGVVYAARDLSTQVRIAIK----EIPERDS----REVQPLHeeialhsrlshKNIVQYlgsvsedgff 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 --FM------------------------------FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFt 109
Cdd:cd06624    81 kiFMeqvpggslsallrskwgplkdnentigyytKQILEGLKYLHDNKIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL- 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 110 VPLKAYTHEIV-TLWYRAPEVL-LGSTHYSTAVDIWSVGCIFAEM 152
Cdd:cd06624   160 AGINPCTETFTgTLQYMAPEVIdKGQRGYGPPADIWSLGCTIIEM 204
STKc_MLCK4 cd14193
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 4; STKs catalyze ...
5-240 1.30e-13

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. In vertebrates, different MLCKs function in smooth (MLCK1), skeletal (MLCK2), and cardiac (MLCK3) muscles. A fourth protein, MLCK4, has also been identified through comprehensive genome analysis although it has not been biochemically characterized. MLCK4 (or MYLK4 or SgK085) contains a single kinase domain near the C-terminus. The MLCK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271095 [Multi-domain]  Cd Length: 261  Bit Score: 68.40  E-value: 1.30e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   5 EKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEEDSHRKGSNPRPLE-ASLVQ--------------------- 60
Cdd:cd14193     7 NKEEILGGGRFGQVHKCEEKSSGLKLAAKiiKARSQKEKEEVKNEIEVMNQLNhANLIQlydafesrndivlvmeyvdgg 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 -------------------RFMFQLFKGVAHCHSHGVLHRDLKPQNLL-LDKDKGILKIADLGLSRAFTvPLKAYTHEIV 120
Cdd:cd14193    87 elfdriidenynlteldtiLFIKQICEGIQYMHQMYILHLDLKPENILcVSREANQVKIIDFGLARRYK-PREKLRVNFG 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtpteqQWPgvmalrdwhvYPKWEP 200
Cdd:cd14193   166 TPEFLAPEV-VNYEFVSFPTDMWSLGVIAYMLLSGLSPFLGEDDNETLNNILAC-------QWD----------FEDEEF 227
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1063706111 201 QDLSRavpslspEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14193   228 ADISE-------EAKDFISKLLIKEKSWRMSASEALKHPW 260
STKc_CaMKK2 cd14199
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 2; ...
61-240 1.44e-13

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). CaMKK2, also called CaMKK beta, is one of the most versatile CaMKs. It is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. CaMKK2 contains unique N- and C-terminal domains and a central catalytic kinase domain that is followed by a regulatory domain that bears overlapping autoinhibitory and CaM-binding regions. It can be activated by signaling through G-coupled receptors, IP3 receptors, plasma membrane ion channels, and Toll-like receptors. Thus, CaMKK2 acts as a molecular hub that is capable of receiving and decoding signals from diverse pathways. The CaMKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271101 [Multi-domain]  Cd Length: 286  Bit Score: 68.45  E-value: 1.44e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMFQ-LFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYST- 138
Cdd:cd14199   129 RFYFQdLIKGIEYLHYQKIIHRDVKPSNLLVGED-GHIKIADFGVSNEFEGSDALLTNTVGTPAFMAPETLSETRKIFSg 207
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 139 -AVDIWSVGCIFAEMIRRQALFPGDSefqqllhifrllgtpteqqwpgVMALrdwHVYPKWEPQDLSRAvPSLSPEGIDL 217
Cdd:cd14199   208 kALDVWAMGVTLYCFVFGQCPFMDER----------------------ILSL---HSKIKTQPLEFPDQ-PDISDDLKDL 261
                         170       180
                  ....*....|....*....|...
gi 1063706111 218 LTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14199   262 LFRMLDKNPESRISVPEIKLHPW 284
PKc_CLK1_4 cd14213
Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases 1 and 4; ...
2-241 1.46e-13

Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases 1 and 4; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. CLK1 plays a role in neuronal differentiation. CLKs are involved in the phosphorylation and regulation of serine/arginine-rich (SR) proteins, which play a crucial role in pre-mRNA splicing by directing splice site selection. SR proteins are phosphorylated first by SR protein kinases (SRPKs) at the N-terminus, which leads to its assembly into nuclear speckles where splicing factors are stored. CLKs phosphorylate the C-terminal part of SR proteins, causing the nuclear speckles to dissolve and splicing factors to be recruited at sites of active transcription. Based on a conserved "EHLAMMERILG" signature motif which may be crucial for substrate specificity, CLKs are also referred to as LAMMER kinases. CLKs autophosphorylate at tyrosine residues and phosphorylate their substrates exclusively on serine/threonine residues. The CLK1/4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271115 [Multi-domain]  Cd Length: 330  Bit Score: 69.11  E-value: 1.46e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKT-TGKLVALKKTR---------------LE----MDEEDSHR--------------- 46
Cdd:cd14213    12 ARYEIVDTLGEGAFGKVVECIDHKmGGMHVAVKIVKnvdryreaarseiqvLEhlntTDPNSTFRcvqmlewfdhhghvc 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 --------------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLL-------------LDKDKGILKI 99
Cdd:cd14213    92 ivfellglstydfiKENSFLPFPIDHIRNMAYQICKSVNFLHHNKLTHTDLKPENILfvqsdyvvkynpkMKRDERTLKN 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 100 ADLglsRAFTVPLKAYTHE-----IVTLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRL 174
Cdd:cd14213   172 PDI---KVVDFGSATYDDEhhstlVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERI 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 175 LGtPTEQQWPGVMALR--------DW--------HVYPKWEPQDLSRAVPSLSPEGI-DLLTQMLKYNPAERISAKAALD 237
Cdd:cd14213   248 LG-PLPKHMIQKTRKRkyfhhdqlDWdehssagrYVRRRCKPLKEFMLSQDVDHEQLfDLIQKMLEYDPAKRITLDEALK 326

                  ....
gi 1063706111 238 HPYF 241
Cdd:cd14213   327 HPFF 330
PHA03210 PHA03210
serine/threonine kinase US3; Provisional
60-243 1.68e-13

serine/threonine kinase US3; Provisional


Pssm-ID: 165476 [Multi-domain]  Cd Length: 501  Bit Score: 69.34  E-value: 1.68e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  60 QRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIV-TLWYRAPEVLLGSThYST 138
Cdd:PHA03210  270 RAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD-GKIVLGDFGTAMPFEKEREAFDYGWVgTVATNSPEILAGDG-YCE 347
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 139 AVDIWSVGCIFAEMIRRQALFPGD---SEFQQLLHIFRLLGTPTEQQWPGVMALRDWHVYPKWEPQDLSraVPSLS---- 211
Cdd:PHA03210  348 ITDIWSCGLILLDMLSHDFCPIGDgggKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHS--VPPLIrnlg 425
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1063706111 212 -PEGIDL-LTQMLKYNPAERISAKAALDHPYFDS 243
Cdd:PHA03210  426 lPADFEYpLVKMLTFDWHLRPGAAELLALPLFSA 459
STKc_MST4 cd06640
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs ...
2-240 2.15e-13

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132971 [Multi-domain]  Cd Length: 277  Bit Score: 68.16  E-value: 2.15e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED------------------------SHRKGSN------- 50
Cdd:cd06640     4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEiediqqeitvlsqcdspyvtkyygSYLKGTKlwiimey 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 -----------PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYTHEI 119
Cdd:cd06640    84 lgggsaldllrAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL-SEQGDVKLADFGVAGQLTDTQIKRNTFV 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 120 VTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQalfPGDSEfqqlLHIFRLLgtpteqqwpgvmalrdWHVyPKWE 199
Cdd:cd06640   163 GTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGE---PPNSD----MHPMRVL----------------FLI-PKNN 217
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 200 PQDLsraVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd06640   218 PPTL---VGDFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255
STKc_GRK4 cd05631
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4; STKs ...
60-245 2.19e-13

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures and is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173720 [Multi-domain]  Cd Length: 285  Bit Score: 68.10  E-value: 2.19e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  60 QRFMF---QLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLsrAFTVPL-KAYTHEIVTLWYRAPEVlLGSTH 135
Cdd:cd05631   102 QRAIFyaaELCCGLEDLQRERIVYRDLKPENILLD-DRGHIRISDLGL--AVQIPEgETVRGRVGTVGYMAPEV-INNEK 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 136 YSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQqwpgvmalrdwhvYPKwepqdlsravpSLSPEGI 215
Cdd:cd05631   178 YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEE-------------YSE-----------KFSEDAK 233
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1063706111 216 DLLTQMLKYNPAERI-----SAKAALDHPYFDSLD 245
Cdd:cd05631   234 SICRMLLTKNPKERLgcrgnGAAGVKQHPIFKNIN 268
PTZ00266 PTZ00266
NIMA-related protein kinase; Provisional
65-169 2.36e-13

NIMA-related protein kinase; Provisional


Pssm-ID: 173502 [Multi-domain]  Cd Length: 1021  Bit Score: 69.38  E-value: 2.36e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   65 QLFKGVAHCHS-------HGVLHRDLKPQNLLLD----------------KDKGILKIADLGLSRafTVPLKAYTHEIV- 120
Cdd:PTZ00266   126 QLLHALAYCHNlkdgpngERVLHRDLKPQNIFLStgirhigkitaqannlNGRPIAKIGDFGLSK--NIGIESMAHSCVg 203
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1063706111  121 TLWYRAPEVLLGSTH-YSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLL 169
Cdd:PTZ00266   204 TPYYWSPELLLHETKsYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLI 253
STKc_CASK cd14094
Catalytic domain of the Serine/Threonine Kinase, Calcium/calmodulin-dependent serine protein ...
58-240 2.91e-13

Catalytic domain of the Serine/Threonine Kinase, Calcium/calmodulin-dependent serine protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CASK belongs to the MAGUK (membrane-associated guanylate kinase) protein family, which functions as multiple domain adaptor proteins and is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). The enzymatically inactive GuK domain in MAGUK proteins mediates protein-protein interactions and associates intramolecularly with the SH3 domain. In addition, CASK contains a catalytic kinase and two L27 domains. It is highly expressed in the nervous system and plays roles in synaptic protein targeting, neural development, and regulation of gene expression. Binding partners include parkin (a Parkinson's disease molecule), neurexin (adhesion molecule), syndecans, calcium channel proteins, CINAP (nucleosome assembly protein), transcription factor Tbr-1, and the cytoplasmic adaptor proteins Mint1, Veli/mLIN-7/MALS, SAP97, caskin, and CIP98. Deletion or mutations in the CASK gene have been implicated in X-linked mental retardation. The CASK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270996 [Multi-domain]  Cd Length: 300  Bit Score: 67.95  E-value: 2.91e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  58 LVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGI-LKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVlLGSTH 135
Cdd:cd14094   110 VASHYMRQILEALRYCHDNNIIHRDVKPHCVLLaSKENSApVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREP 188
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 136 YSTAVDIWSVGCIFAEMIRRQALFPGDSEfqqllhifRLLGTPTEQQWPgvMALRDWhvypkwepqdlsravPSLSPEGI 215
Cdd:cd14094   189 YGKPVDVWGCGVILFILLSGCLPFYGTKE--------RLFEGIIKGKYK--MNPRQW---------------SHISESAK 243
                         170       180
                  ....*....|....*....|....*
gi 1063706111 216 DLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14094   244 DLVRRMLMLDPAERITVYEALNHPW 268
STKc_MSK1_N cd05613
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
4-245 3.63e-13

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MSK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270764 [Multi-domain]  Cd Length: 290  Bit Score: 67.33  E-value: 3.63e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVY---KAMEKTTGKLVALK---------------KTRLEMDEEDSHRKGS---------------- 49
Cdd:cd05613     2 FELLKVLGTGAYGKVFlvrKVSGHDAGKLYAMKvlkkativqkaktaeHTRTERQVLEHIRQSPflvtlhyafqtdtklh 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 ------NPRPLEASLVQRFMF-----QLFKG-----VAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLK 113
Cdd:cd05613    82 lildyiNGGELFTHLSQRERFtenevQIYIGeivlaLEHLHKLGIIYRDIKLENILLDSS-GHVVLTDFGLSKEFLLDEN 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYTHEIV-TLWYRAPEVLL-GSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLgtpteqqwpgvmaLRD 191
Cdd:cd05613   161 ERAYSFCgTIEYMAPEIVRgGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI-------------LKS 227
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1063706111 192 WHVYPKwepqdlsravpSLSPEGIDLLTQMLKYNPAERI-----SAKAALDHPYFDSLD 245
Cdd:cd05613   228 EPPYPQ-----------EMSALAKDIIQRLLMKDPKKRLgcgpnGADEIKKHPFFQKIN 275
STKc_TSSK6-like cd14164
Catalytic domain of testis-specific serine/threonine kinase 6 and similar proteins; STKs ...
12-153 3.64e-13

Catalytic domain of testis-specific serine/threonine kinase 6 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK6, also called SSTK, is expressed at the head of elongated sperm. It can phosphorylate histones and associate with heat shock protens HSP90 and HSC70. Male mice deficient in TSSK6 are infertile, showing spermatogenic impairment including reduced sperm counts, impaired DNA condensation, abnormal morphology and decreased motility rates. The TSSK6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271066 [Multi-domain]  Cd Length: 256  Bit Score: 67.19  E-value: 3.64e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  12 EGTYGKVYKAMEKTTGKLValkktrlemdeEDSHRKGSNPRPLeaslvQRFMF-QLFKGVAHCHSHGVLHRDLKPQNLLL 90
Cdd:cd14164    70 EVANGRLYIVMEAAATDLL-----------QKIQEVHHIPKDL-----ARDMFaQMVGAVNYLHDMNIVHRDLKCENILL 133
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063706111  91 DKDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMI 153
Cdd:cd14164   134 SADDRKIKIADFGFARFVEDYPELSTTFCGSRAYTPPEVILGTPYDPKKYDVWSLGVVLYVMV 196
STKc_PLK3 cd14189
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 3; STKs catalyze the ...
59-241 3.90e-13

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK3, also called Prk or Fnk (FGF-inducible kinase), regulates angiogenesis and responses to DNA damage. Activated PLK3 mediates Chk2 phosphorylation by ATM and the resulting checkpoint activation. PLK3 phosphorylates DNA polymerase delta and may be involved in DNA repair. It also inhibits Cdc25c, thereby regulating the onset of mitosis. The PLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271091 [Multi-domain]  Cd Length: 255  Bit Score: 66.87  E-value: 3.90e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHyST 138
Cdd:cd14189   103 VRYYLKQIISGLKYLHLKGILHRDLKLGNFFINENME-LKVGDFGLAARLEPPEQRKKTICGTPNYLAPEVLLRQGH-GP 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 139 AVDIWSVGCIFAEMirrqalfpgdsefqqllhifrLLGTPTEQqwpgVMALRDWHVYPKwepqDLSRAVP-SLSPEGIDL 217
Cdd:cd14189   181 ESDVWSLGCVMYTL---------------------LCGNPPFE----TLDLKETYRCIK----QVKYTLPaSLSLPARHL 231
                         170       180
                  ....*....|....*....|....
gi 1063706111 218 LTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14189   232 LAGILKRNPGDRLTLDQILEHEFF 255
STKc_SPEG_rpt2 cd14111
Catalytic kinase domain, second repeat, of Giant Serine/Threonine Kinase Striated muscle ...
2-148 3.97e-13

Catalytic kinase domain, second repeat, of Giant Serine/Threonine Kinase Striated muscle preferentially expressed protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Striated muscle preferentially expressed gene (SPEG) generates 4 different isoforms through alternative promoter use and splicing in a tissue-specific manner: SPEGalpha and SPEGbeta are expressed in cardiac and skeletal striated muscle; Aortic Preferentially Expressed Protein-1 (APEG-1) is expressed in vascular smooth muscle; and Brain preferentially expressed gene (BPEG) is found in the brain and aorta. SPEG proteins have mutliple immunoglobulin (Ig), 2 fibronectin type III (FN3), and two kinase domains. They are necessary for cardiac development and survival. The SPEG subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271013 [Multi-domain]  Cd Length: 257  Bit Score: 67.16  E-value: 3.97e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDS-------------------HRKGSNPR---------- 52
Cdd:cd14111     3 KPYTFLDEKARGRFGVIRRCRENATGKNFPAKIVPYQAEEKQGvlqeyeilkslhherimalHEAYITPRylvliaefcs 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 --PLEASLVQRF----------MFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFT-VPLKAYTHEI 119
Cdd:cd14111    83 gkELLHSLIDRFryseddvvgyLVQILQGLEYLHGRRVLHLDIKPDNIMVTNLN-AIKIVDFGSAQSFNpLSLRQLGRRT 161
                         170       180
                  ....*....|....*....|....*....
gi 1063706111 120 VTLWYRAPEVLLGSThYSTAVDIWSVGCI 148
Cdd:cd14111   162 GTLEYMAPEMVKGEP-VGPPADIWSIGVL 189
PKc_MEK cd06615
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP) ...
76-248 4.44e-13

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MEK1 and MEK2 are MAPK kinases (MAPKKs or MKKs), and are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132946 [Multi-domain]  Cd Length: 308  Bit Score: 67.46  E-value: 4.44e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  76 HGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFtvpLKAYTHEIV-TLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEM-I 153
Cdd:cd06615   119 HKIMHRDVKPSNILVNSR-GEIKLCDFGVSGQL---IDSMANSFVgTRSYMSPERLQG-THYTVQSDIWSLGLSLVEMaI 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 154 RRQALFPGDSefQQLLHIFrllGTPTEQqwpgvMALRDWHVYPKWEPQDLSRAV--------------PSL-----SPEG 214
Cdd:cd06615   194 GRYPIPPPDA--KELEAMF---GRPVSE-----GEAKESHRPVSGHPPDSPRPMaifelldyivneppPKLpsgafSDEF 263
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1063706111 215 IDLLTQMLKYNPAERISAKAALDHPYFDSLDKSQ 248
Cdd:cd06615   264 QDFVDKCLKKNPKERADLKELTKHPFIKRAELEE 297
STKc_TNIK cd06637
Catalytic domain of the Serine/Threonine Kinase, Traf2- and Nck-Interacting Kinase; STKs ...
4-152 4.48e-13

Catalytic domain of the Serine/Threonine Kinase, Traf2- and Nck-Interacting Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270807 [Multi-domain]  Cd Length: 296  Bit Score: 67.44  E-value: 4.48e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED------------SHRKG----------SNPRPLEASLVQR 61
Cdd:cd06637     8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEeikqeinmlkkySHHRNiatyygafikKNPPGMDDQLWLV 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMF----------------------------QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLK 113
Cdd:cd06637    88 MEFcgagsvtdlikntkgntlkeewiayicrEILRGLSHLHQHKVIHRDIKGQNVLLTENAEV-KLVDFGVSAQLDRTVG 166
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 114 AYTHEIVTLWYRAPEVLLGSTH----YSTAVDIWSVGCIFAEM 152
Cdd:cd06637   167 RRNTFIGTPYWMAPEVIACDENpdatYDFKSDLWSLGITAIEM 209
STKc_RSK3_C cd14178
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 3 (also called ...
55-249 4.56e-13

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 3 (also called Ribosomal protein S6 kinase alpha-2 or 90kDa ribosomal protein S6 kinase 2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK3 is also called S6K-alpha-2, RPS6KA2, p90RSK2 or MAPK-activated protein kinase 1c (MAPKAPK-1c). RSK3 binds muscle A-kinase anchoring protein (mAKAP)-b directly and regulates concentric cardiac myocyte growth. The RSK3 gene, RPS6KA2, is a putative tumor suppressor gene in sporadic epithelial ovarian cancer and variations to the gene may be associated with rectal cancer risk. RSK3 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271080 [Multi-domain]  Cd Length: 293  Bit Score: 67.35  E-value: 4.56e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVqrfMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG---ILKIADLGlsraFTVPLKAYTHEIVTLWYR----AP 127
Cdd:cd14178    98 EASAV---LCTITKTVEYLHSQGVVHRDLKPSNILYMDESGnpeSIRICDFG----FAKQLRAENGLLMTPCYTanfvAP 170
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 128 EVlLGSTHYSTAVDIWSVGCIFAEMIRRQALF---PGDSEFQQLLHIfrllGTpteqqwpGVMALRDWHvypkWEpqdls 204
Cdd:cd14178   171 EV-LKRQGYDAACDIWSLGILLYTMLAGFTPFangPDDTPEEILARI----GS-------GKYALSGGN----WD----- 229
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 205 ravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF---DSLDKSQF 249
Cdd:cd14178   230 ----SISDAAKDIVSKMLHVDPHQRLTAPQVLRHPWIvnrEYLSQNQL 273
STKc_MLTK cd14060
Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated ...
11-166 4.68e-13

Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated protein Triple Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLTK, also called zipper sterile-alpha-motif kinase (ZAK), contains a catalytic kinase domain and a leucine zipper. There are two alternatively-spliced variants, MLTK-alpha and MLTK-beta. MLTK-alpha contains a sterile-alpha-motif (SAM) at the C-terminus. MLTK regulates the c-Jun N-terminal kinase, extracellular signal-regulated kinase, p38 MAPK, and NF-kB pathways. ZAK is the MAP3K involved in the signaling cascade that leads to the ribotoxic stress response initiated by cellular damage due to Shiga toxins and ricin. It may also play a role in cell transformation and cancer development. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.The MLTK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270962 [Multi-domain]  Cd Length: 242  Bit Score: 66.52  E-value: 4.68e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  11 GEGTYGKVYKAMEKTTGKLVALKKTrLEMDEED------SHR-----------------------KGS--------NPRP 53
Cdd:cd14060     2 GGGSFGSVYRAIWVSQDKEVAVKKL-LKIEKEAeilsvlSHRniiqfygaileapnygivteyasYGSlfdylnsnESEE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHG---VLHRDLKPQNLLLDKDkGILKIADLGLSRAFtvplkayTHEIV-----TLWYR 125
Cdd:cd14060    81 MDMDQIMTWATDIAKGMHYLHMEApvkVIHRDLKSRNVVIAAD-GVLKICDFGASRFH-------SHTTHmslvgTFPWM 152
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 126 APEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQ 166
Cdd:cd14060   153 APEV-IQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQ 192
STKc_MEKK3 cd06651
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular ...
54-184 5.40e-13

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK3 is a MAPK kinase kinase (MAPKKK or MKKK), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270817 [Multi-domain]  Cd Length: 271  Bit Score: 66.64  E-value: 5.40e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAF-TVPLKAYTHEIV--TLWYRAPEVL 130
Cdd:cd06651   108 LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS-AGNVKLGDFGASKRLqTICMSGTGIRSVtgTPYWMSPEVI 186
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 131 LGSThYSTAVDIWSVGCIFAEMIRRQalfPGDSEFQQLLHIFRLLGTPTEQQWP 184
Cdd:cd06651   187 SGEG-YGRKADVWSLGCTVVEMLTEK---PPWAEYEAMAAIFKIATQPTNPQLP 236
STKc_KIS cd14020
Catalytic domain of the Serine/Threonine Kinase, Kinase Interacting with Stathmin (also called ...
58-241 7.06e-13

Catalytic domain of the Serine/Threonine Kinase, Kinase Interacting with Stathmin (also called U2AF homology motif (UHM) kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. KIS (or UHMK1) contains an N-terminal kinase domain and a C-terminal domain with a UHM motif, a protein interaction motif initially found in the pre-mRNA splicing factor U2AF. It phosphorylates the splicing factor SF1, which enhances binding to the splice site to promote spliceosome assembly. KIS was first identified as a kinase that interacts with stathmin, a phosphoprotein that plays a role in axon development and microtubule dynamics. It localizes in RNA granules in neurons and is important in neurite outgrowth. The KIS/UHMK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270922 [Multi-domain]  Cd Length: 285  Bit Score: 66.50  E-value: 7.06e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  58 LVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSraftvpLKAYTHE---IVTLWYRAPEVLL--- 131
Cdd:cd14020   111 MIQHCARDVLEALAFLHHEGYVHADLKPRNILWSAEDECFKLIDFGLS------FKEGNQDvkyIQTDGYRAPEAELqnc 184
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 132 -------GSTHYSTAVDIWSVGCIFAEMirrqalFPGdsefqqllhiFRLLGTPTEQQWPGVMALRDWHVYPKwePQDLS 204
Cdd:cd14020   185 laqaglqSETECTSAVDLWSLGIVLLEM------FSG----------MKLKHTVRSQEWKDNSSAIIDHIFAS--NAVVN 246
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1063706111 205 RAVPSLSPEgiDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14020   247 PAIPAYHLR--DLIKSMLHNDPGKRATAEAALCSPFF 281
STKc_MLCK1 cd14191
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1; STKs catalyze ...
4-241 7.11e-13

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK1 (or MYLK1) phosphorylates myosin regulatory light chain and controls the contraction of smooth muscles. The MLCK1 gene expresses three transcripts in a cell-specific manner: a short MLCK1 which contains three immunoglobulin (Ig)-like and one fibronectin type III (FN3) domains, PEVK and actin-binding regions, and a kinase domain near the C-terminus followed by a regulatory segment containing an autoinhibitory Ca2+/calmodulin binding site; a long MLCK1 containing six additional Ig-like domains at the N-terminus compared to the short MLCK1; and the C-terminal Ig module which results in the expression of telokin in phasic smooth muscles, leading to Ca2+ desensitization by cyclic nucleotides of smooth muscle force. MLCK1 is also responsible for myosin regulatory light chain phosphorylation in nonmuscle cells and may play a role in regulating myosin II ATPase activity. The MLCK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271093 [Multi-domain]  Cd Length: 259  Bit Score: 66.18  E-value: 7.11e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEEDSHRKGS------NPRPLEA------------------- 56
Cdd:cd14191     4 YDIEERLGSGKFGQVFRLVEKKTKKVWAGKffKAYSAKEKENIRQEISimnclhHPKLVQCvdafeekanivmvlemvsg 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  57 ------------SLVQR----FMFQLFKGVAHCHSHGVLHRDLKPQNLL-LDKDKGILKIADLGLSR----AFTVPLKAY 115
Cdd:cd14191    84 gelferiidedfELTERecikYMRQISEGVEYIHKQGIVHLDLKPENIMcVNKTGTKIKLIDFGLARrlenAGSLKVLFG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVtlwyrAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrllgtpteqqwpgvmalrdwhVY 195
Cdd:cd14191   164 TPEFV-----APEV-INYEPIGYATDMWSIGVICYILVSGLSPFMGDNDNETLANV----------------------TS 215
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 196 PKWEPQDlsRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14191   216 ATWDFDD--EAFDEISDDAKDFISNLLKKDMKARLTCTQCLQHPWL 259
STKc_DCKL1 cd14183
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called ...
2-240 8.57e-13

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called Doublecortin-like and CAM kinase-like 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL1 (or DCAMKL1) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL1 contains a serine, threonine, and proline rich domain (SP) and a C-terminal kinase domain with similarity to CAMKs. DCKL1 interacts with tubulin, glucocorticoid receptor, dynein, JIP1/2, caspases (3 and 8), and calpain, among others. It plays roles in neurogenesis, neuronal migration, retrograde transport, and neuronal apoptosis. The DCKL1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271085 [Multi-domain]  Cd Length: 268  Bit Score: 66.17  E-value: 8.57e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---------KTRLEMDEEDSHRKGSNPR----------PLEASLVQRF 62
Cdd:cd14183     6 ERYKVGRTIGDGNFAVVKECVERSTGREYALKiinkskcrgKEHMIQNEVSILRRVKHPNivllieemdmPTELYLVMEL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 ------------------------MFQLFKGVAHCHSHGVLHRDLKPQNLLL----DKDKGiLKIADLGLSRAFTVPLka 114
Cdd:cd14183    86 vkggdlfdaitstnkyterdasgmLYNLASAIKYLHSLNIVHRDIKPENLLVyehqDGSKS-LKLGDFGLATVVDGPL-- 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YThEIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGtptEQQWPgvmalrdwhv 194
Cdd:cd14183   163 YT-VCGTPTYVAPEI-IAETGYGLKVDIWAAGVITYILLCGFPPFRGSGDDQEVLFDQILMG---QVDFP---------- 227
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 195 YPKWEpqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14183   228 SPYWD---------NVSDSAKELITMMLQVDVDQRYSALQVLEHPW 264
STKc_RIP cd13978
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze ...
10-173 1.39e-12

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP kinases serve as essential sensors of cellular stress. They are involved in regulating NF-kappaB and MAPK signaling, and are implicated in mediating cellular processes such as apoptosis, necroptosis, differentiation, and survival. RIP kinases contain a homologous N-terminal kinase domain and varying C-terminal domains. Higher vertebrates contain multiple RIP kinases, with mammals harboring at least five members. RIP1 and RIP2 harbor C-terminal domains from the Death domain (DD) superfamily while RIP4 contains ankyrin (ANK) repeats. RIP3 contain a RIP homotypic interaction motif (RHIM) that facilitates binding to RIP1. RIP1 and RIP3 are important in apoptosis and necroptosis, while RIP2 and RIP4 play roles in keratinocyte differentiation and inflammatory immune responses. The RIP subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270880 [Multi-domain]  Cd Length: 263  Bit Score: 65.55  E-value: 1.39e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALK-------KTRLEMD---EEDSHRKGSNPR----------PLEASLVQRFM------ 63
Cdd:cd13978     1 LGSGGFGTVSKARHVSWFGMVAIKclhsspnCIEERKAllkEAEKMERARHSYvlpllgvcveRRSLGLVMEYMengslk 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 ---------------FQLFKGVA------HCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYTHEIV-- 120
Cdd:cd13978    81 sllereiqdvpwslrFRIIHEIAlgmnflHNMDPPLLHHDLKPENILLDNHFHV-KISDFGLSKLGMKSISANRRRGTen 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 121 ---TLWYRAPEVL-LGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEfqqLLHIFR 173
Cdd:cd13978   160 lggTPIYMAPEAFdDFNKKPTSKSDVYSFAIVIWAVLTRKEPFENAIN---PLLIMQ 213
STKc_SRPK3 cd14218
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 3; STKs ...
49-241 1.54e-12

Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPK3 is highly expressed in the heart and skeletal muscles, and is controlled by a muscle-specific enhancer that is regulated by MEF2. It may play an important role in muscle development. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271120 [Multi-domain]  Cd Length: 365  Bit Score: 66.20  E-value: 1.54e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 SNPRPLEASLVQRFMFQLFKGVAHCHSH-GVLHRDLKPQNLLL------------------------------------- 90
Cdd:cd14218   111 SNYQGLPLPCVKSILRQVLQGLDYLHTKcKIIHTDIKPENILMcvdegyvrrlaaeatiwqqagapppsgssvsfgasdf 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  91 --------DKDKGILKIADLGlsRAFTVPlKAYTHEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGD 162
Cdd:cd14218   191 lvnplepqNADKIRVKIADLG--NACWVH-KHFTEDIQTRQYRALEVLIGAE-YGTPADIWSTACMAFELATGDYLFEPH 266
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 163 S------EFQQLLHIFRLLGtpteqQWPGVMALRDWHVYPKWEPQDLSRAVPSLSPEGI-------------------DL 217
Cdd:cd14218   267 SgedytrDEDHIAHIVELLG-----DIPPHFALSGRYSREYFNRRGELRHIKNLKHWGLyevlvekyewpleqaaqftDF 341
                         250       260
                  ....*....|....*....|....
gi 1063706111 218 LTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14218   342 LLPMMEFLPEKRATAAQCLQHPWL 365
PKc_MKK7 cd06618
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
2-171 1.66e-12

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 7; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270791 [Multi-domain]  Cd Length: 295  Bit Score: 65.47  E-value: 1.66e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHR--------KGSNPRPLEASLVQRFMF--------- 64
Cdd:cd06618    15 NDLENLGEIGSGTCGQVYKMRHKKTGHVMAVKQMRRSGNKEENKRilmdldvvLKSHDCPYIVKCYGYFITdsdvficme 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 -------QLFKGVAHC---------------------HSHGVLHRDLKPQNLLLDKDkGILKIADLGLSrAFTVPLKAYT 116
Cdd:cd06618    95 lmstcldKLLKRIQGPipedilgkmtvsivkalhylkEKHGVIHRDVKPSNILLDES-GNVKLCDFGIS-GRLVDSKAKT 172
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1063706111 117 HEIVTLWYRAPEVLLGSTH--YSTAVDIWSVGCIFAEMIRRQALFPG-DSEFQQLLHI 171
Cdd:cd06618   173 RSAGCAAYMAPERIDPPDNpkYDIRADVWSLGISLVELATGQFPYRNcKTEFEVLTKI 230
PK_TRB2 cd14022
Pseudokinase domain of Tribbles Homolog 2; The pseudokinase domain shows similarity to protein ...
17-241 2.35e-12

Pseudokinase domain of Tribbles Homolog 2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. TRB2 binds and negatively regulates the mitogen activated protein kinase (MAPK) kinases, MKK7 and MEK1, which are activators of the MAPKs, ERK and JNK. It controls the activation of inflammatory monocytes, which is essential in innate immune responses and the pathogenesis of inflammatory diseases such as atherosclerosis. TRB2 expression is down-regulated in human acute myeloid leukaemia (AML), which may lead to enhanced cell survival and pathogenesis of the disease. TRB2 is one of three Tribbles Homolog (TRB) proteins present in vertebrates that are encoded by three separate genes. TRB proteins interact with many proteins involved in signalling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, and gene expression. The TRB2 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270924 [Multi-domain]  Cd Length: 242  Bit Score: 64.67  E-value: 2.35e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  17 KVYKAMEKTTGKLVALKKTRLEMDEEDShrkgsnprpleaslvQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKG 95
Cdd:cd14022    59 KAYVFFERSYGDMHSFVRTCKKLREEEA---------------ARLFYQIASAVAHCHDGGLVLRDLKLRKFVFkDEERT 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  96 ILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYS-TAVDIWSVGCIFAEMIRRQALFpGDSEFQQLLHIFRl 174
Cdd:cd14022   124 RVKLESLEDAYILRGHDDSLSDKHGCPAYVSPEILNTSGSYSgKAADVWSLGVMLYTMLVGRYPF-HDIEPSSLFSKIR- 201
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 175 lgtpteqqwpgvmalRDWHVYPKwepqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14022   202 ---------------RGQFNIPE-----------TLSPKAKCLIRSILRREPSERLTSQEILDHPWF 242
STKc_GRK1 cd05608
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs ...
65-159 3.34e-12

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK1 (also called rhodopsin kinase) belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270759 [Multi-domain]  Cd Length: 288  Bit Score: 64.90  E-value: 3.34e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSraftVPLKAYTHEIV----TLWYRAPEVLLGStHYSTAV 140
Cdd:cd05608   113 QIISGLEHLHQRRIIYRDLKPENVLLD-DDGNVRISDLGLA----VELKDGQTKTKgyagTPGFMAPELLLGE-EYDYSV 186
                          90
                  ....*....|....*....
gi 1063706111 141 DIWSVGCIFAEMIRRQALF 159
Cdd:cd05608   187 DYFTLGVTLYEMIAARGPF 205
STKc_PKD cd14082
Catalytic domain of the Serine/Threonine kinase, Protein Kinase D; STKs catalyze the transfer ...
8-240 3.73e-12

Catalytic domain of the Serine/Threonine kinase, Protein Kinase D; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKDs are important regulators of many intracellular signaling pathways such as ERK and JNK, and cellular processes including the organization of the trans-Golgi network, membrane trafficking, cell proliferation, migration, and apoptosis. They contain N-terminal cysteine-rich zinc binding C1 (PKC conserved region 1), central PH (Pleckstrin Homology), and C-terminal catalytic kinase domains. Mammals harbor three types of PKDs: PKD1 (or PKCmu), PKD2, and PKD3 (or PKCnu). PKDs are activated in a PKC-dependent manner by many agents including diacylglycerol (DAG), PDGF, neuropeptides, oxidative stress, and tumor-promoting phorbol esters, among others. The PKD subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270984 [Multi-domain]  Cd Length: 260  Bit Score: 64.36  E-value: 3.73e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDSHR----------------------------------KG-- 48
Cdd:cd14082     9 EVLGSGQFGIVYGGKHRKTGRDVAIKvidKLRFPTKQESQLRnevailqqlshpgvvnlecmfetpervfvvmeklHGdm 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 -----SNPRPLEASLVQRFMF-QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGI--LKIADLGLSRafTVPLKAYTHEIV 120
Cdd:cd14082    89 lemilSSEKGRLPERITKFLVtQILVALRYLHSKNIVHCDLKPENVLLASAEPFpqVKLCDFGFAR--IIGEKSFRRSVV 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 -TLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLgtpteqqwpgvmalrdwhvYPkwe 199
Cdd:cd14082   167 gTPAYLAPEVLR-NKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFM-------------------YP--- 223
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 200 PQDLSRavpsLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14082   224 PNPWKE----ISPDAIDLINNLLQVKMRKRYSVDKSLSHPW 260
STKc_TGFbR-like cd13998
Catalytic domain of Transforming Growth Factor beta Receptor-like Serine/Threonine Kinases; ...
68-155 3.84e-12

Catalytic domain of Transforming Growth Factor beta Receptor-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of receptors for the TGFbeta family of secreted signaling molecules including TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. There are two types of TGFbeta receptors included in this subfamily, I and II, that play different roles in signaling. For signaling to occur, the ligand first binds to the high-affinity type II receptor, which is followed by the recruitment of the low-affinity type I receptor to the complex and its activation through trans-phosphorylation by the type II receptor. The active type I receptor kinase starts intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. Different ligands interact with various combinations of types I and II receptors to elicit a specific signaling pathway. Activins primarily signal through combinations of ACVR1b/ALK7 and ACVR2a/b; myostatin and GDF11 through TGFbR1/ALK4 and ACVR2a/b; BMPs through ACVR1/ALK1 and BMPR2; and TGFbeta through TGFbR1 and TGFbR2. The TGFbR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270900 [Multi-domain]  Cd Length: 289  Bit Score: 64.38  E-value: 3.84e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  68 KGVAHCHSH---------GVLHRDLKPQNLLLDKDkGILKIADLGLSRAFT----VPLKAYTHEIVTLWYRAPEVLLGST 134
Cdd:cd13998   103 RGLAHLHSEipgctqgkpAIAHRDLKSKNILVKND-GTCCIADFGLAVRLSpstgEEDNANNGQVGTKRYMAPEVLEGAI 181
                          90       100
                  ....*....|....*....|....*.
gi 1063706111 135 HYSTA-----VDIWSVGCIFAEMIRR 155
Cdd:cd13998   182 NLRDFesfkrVDIYAMGLVLWEMASR 207
STKc_YPK1_like cd05585
Catalytic domain of Yeast Protein Kinase 1-like Serine/Threonine Kinases; STKs catalyze the ...
10-245 3.96e-12

Catalytic domain of Yeast Protein Kinase 1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270737 [Multi-domain]  Cd Length: 313  Bit Score: 64.90  E-value: 3.96e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKK-------TRLEMDEEDSHR----KGSNP--RPLEASL------------------ 58
Cdd:cd05585     2 IGKGSFGKVMQVRKKDTSRIYALKTirkahivSRSEVTHTLAERtvlaQVDCPfiVPLKFSFqspeklylvlafinggel 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 ---VQR-----------FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHEIVTLWY 124
Cdd:cd05585    82 fhhLQRegrfdlsrarfYTAELLCALECLHKFNVIYRDLKPENILLDY-TGHIALCDFGLCKLNMKDDDKTNTFCGTPEY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 125 RAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrllgtpteqqwpgvmaLRDWHVYPKWEPQDLS 204
Cdd:cd05585   161 LAPELLLGHG-YTKAVDWWTLGVLLYEMLTGLPPFYDENTNEMYRKI-----------------LQEPLRFPDGFDRDAK 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 205 ravpslspegiDLLTQMLKYNPAERISAKAALD---HPYFDSLD 245
Cdd:cd05585   223 -----------DLLIGLLNRDPTKRLGYNGAQEiknHPFFDQID 255
STKc_MAP3K12_13 cd14059
Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase ...
10-153 4.06e-12

Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinases 12 and 13; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP3K12 is also called MAPK upstream kinase (MUK), dual leucine zipper-bearing kinase (DLK) or leucine-zipper protein kinase (ZPK). It is involved in the c-Jun N-terminal kinase (JNK) pathway that directly regulates axonal regulation through the phosphorylation of microtubule-associated protein 1B (MAP1B). It also regulates the differentiation of many cell types including adipocytes and may play a role in adipogenesis. MAP3K13, also called leucine zipper-bearing kinase (LZK), directly phosphorylates and activates MKK7, which in turn activates the JNK pathway. It also activates NF-kB through IKK activation and this activity is enhanced by antioxidant protein-1 (AOP-1). MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAP2Ks (MAPKKs or MKKs), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The MAP3K12/13 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270961 [Multi-domain]  Cd Length: 237  Bit Score: 64.05  E-value: 4.06e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAmeKTTGKLVALKKTRLEMDEEDSH-RKGSNP----------------------------------RPL 54
Cdd:cd14059     1 LGSGAQGAVFLG--KFRGEEVAVKKVRDEKETDIKHlRKLNHPniikfkgvctqapcycilmeycpygqlyevlragREI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFTVPLKAYTHEIVTLWYrAPEVLLgST 134
Cdd:cd14059    79 TPSLLVDWSKQIASGMNYLHLHKIIHRDLKSPNVLVTYND-VLKISDFGTSKELSEKSTKMSFAGTVAWM-APEVIR-NE 155
                         170
                  ....*....|....*....
gi 1063706111 135 HYSTAVDIWSVGCIFAEMI 153
Cdd:cd14059   156 PCSEKVDIWSFGVVLWELL 174
STKc_cPKC cd05587
Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C; ...
69-245 4.36e-12

Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. cPKCs are potent kinases for histones, myelin basic protein, and protamine. They depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270739 [Multi-domain]  Cd Length: 320  Bit Score: 64.72  E-value: 4.36e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAyTHEIV-TLWYRAPEVLLgSTHYSTAVDIWSVGC 147
Cdd:cd05587   109 GLFFLHSKGIIYRDLKLDNVMLDAE-GHIKIADFGMCKEGIFGGKT-TRTFCgTPDYIAPEIIA-YQPYGKSVDWWAYGV 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 148 IFAEMIRRQALFPGDSEFQqllhifrLLGTPTEQQWPgvmalrdwhvYPKwepqdlsravpSLSPEGIDLLTQMLKYNPA 227
Cdd:cd05587   186 LLYEMLAGQPPFDGEDEDE-------LFQSIMEHNVS----------YPK-----------SLSKEAVSICKGLLTKHPA 237
                         170       180
                  ....*....|....*....|...
gi 1063706111 228 ERI-----SAKAALDHPYFDSLD 245
Cdd:cd05587   238 KRLgcgptGERDIKEHPFFRRID 260
PTZ00267 PTZ00267
NIMA-related protein kinase; Provisional
53-170 5.25e-12

NIMA-related protein kinase; Provisional


Pssm-ID: 140293 [Multi-domain]  Cd Length: 478  Bit Score: 65.04  E-value: 5.25e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFT--VPLKAYTHEIVTLWYRAPEvL 130
Cdd:PTZ00267  165 PFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL-MPTGIIKLGDFGFSKQYSdsVSLDVASSFCGTPYYLAPE-L 242
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 131 LGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSE---FQQLLH 170
Cdd:PTZ00267  243 WERKRYSKKADMWSLGVILYELLTLHRPFKGPSQreiMQQVLY 285
STKc_NIM1 cd14075
Catalytic domain of the Serine/Threonine Kinase, NIM1; STKs catalyze the transfer of the ...
4-231 6.45e-12

Catalytic domain of the Serine/Threonine Kinase, NIM1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NIM1 is a widely-expressed kinase belonging to the AMP-activated protein kinase (AMPK) subfamily. Although present in most tissues, NIM1 kinase activity is only observed in the brain and testis. NIM1 is capable of autophosphorylating and activating itself, but may be present in other tissues in the inactive form. The physiological function of NIM1 has yet to be elucidated. The NIM1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270977 [Multi-domain]  Cd Length: 255  Bit Score: 63.51  E-value: 6.45e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEkvgegTYGKVYKAMEKTT-GKLVALKKTRLEMDEEDShrkgsnpRPLEAslvqrfmfQLFKGVAHCHSHGVLHRD 82
Cdd:cd14075    67 YEVVE-----TLSKLHLVMEYASgGELYTKISTEGKLSESEA-------KPLFA--------QIVSAVKHMHENNIIHRD 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  83 LKPQNLLLdKDKGILKIADLGLSrafTVPLKAYTheIVTLW----YRAPEVLLGSTHYSTAVDIWSVGCIFAEMIrrqal 158
Cdd:cd14075   127 LKAENVFY-ASNNCVKVGDFGFS---THAKRGET--LNTFCgsppYAAPELFKDEHYIGIYVDIWALGVLLYFMV----- 195
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 159 fpgdsefqqllhifrllgtpteqqwPGVMALRDWHVyPKWEPQDLSRA--VPS-LSPEGIDLLTQMLKYNPAERIS 231
Cdd:cd14075   196 -------------------------TGVMPFRAETV-AKLKKCILEGTytIPSyVSEPCQELIRGILQPVPSDRYS 245
STKc_LATS2 cd05626
Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2; STKs ...
58-247 7.08e-12

Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. The LATS2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173715 [Multi-domain]  Cd Length: 381  Bit Score: 64.26  E-value: 7.08e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  58 LVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAF--TVPLKAY---------THEIVTLW--- 123
Cdd:cd05626   102 LARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLD-GHIKLTDFGLCTGFrwTHNSKYYqkgshirqdSMEPSDLWddv 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 124 ---------------------------------YRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFpgdsefqqllh 170
Cdd:cd05626   181 sncrcgdrlktleqratkqhqrclahslvgtpnYIAPEVLL-RKGYTQLCDWWSVGVILFEMLVGQPPF----------- 248
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 171 ifrLLGTPTEQQwpgvMALRDWHVYPKWEPQdlsravPSLSPEGIDLLTQmLKYNPAERISAKAALD---HPYFDSLDKS 247
Cdd:cd05626   249 ---LAPTPTETQ----LKVINWENTLHIPPQ------VKLSPEAVDLITK-LCCSAEERLGRNGADDikaHPFFSEVDFS 314
STKc_GRK2 cd14223
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 2; STKs ...
10-245 7.33e-12

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK2, also called beta-adrenergic receptor kinase (beta-ARK) or beta-ARK1, is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. GRK2 contains an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. TheGRK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271125 [Multi-domain]  Cd Length: 321  Bit Score: 63.91  E-value: 7.33e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDS---------------------------HRKGS--------NP 51
Cdd:cd14223     8 IGRGGFGEVYGCRKADTGKMYAMKcldKKRIKMKQGETlalnerimlslvstgdcpfivcmsyafHTPDKlsfildlmNG 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRFMF----------QLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTvplKAYTHEIV- 120
Cdd:cd14223    88 GDLHYHLSQHGVFseaemrfyaaEIILGLEHMHSRFVVYRDLKPANILLD-EFGHVRISDLGLACDFS---KKKPHASVg 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRrqalfpGDSEFQQllhifrllgtpteqqwpgvMALRDWHvypKWEP 200
Cdd:cd14223   164 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR------GHSPFRQ-------------------HKTKDKH---EIDR 215
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 201 QDLSRAVP---SLSPEGIDLLTQMLKYNPAERI-----SAKAALDHPYFDSLD 245
Cdd:cd14223   216 MTLTMAVElpdSFSPELRSLLEGLLQRDVNRRLgcmgrGAQEVKEEPFFRGLD 268
STKc_myosinIIIB_N cd06639
N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIB myosin; STKs catalyze ...
2-152 7.46e-12

N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIB myosin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. They may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270808 [Multi-domain]  Cd Length: 291  Bit Score: 63.86  E-value: 7.46e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEE---------------------------DSHRKGS--- 49
Cdd:cd06639    22 DTWDIIETIGKGTYGKVYKVTNKKDGSLAAVKilDPISDVDEEieaeynilrslpnhpnvvkfygmfykaDQYVGGQlwl 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 -------------------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTV 110
Cdd:cd06639   102 vlelcnggsvtelvkgllkCGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGV-KLVDFGVSAQLTS 180
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1063706111 111 PLKAYTHEIVTLWYRAPEVLLGSTHYSTA----VDIWSVGCIFAEM 152
Cdd:cd06639   181 ARLRRNTSVGTPFWMAPEVIACEQQYDYSydarCDVWSLGITAIEL 226
STKc_CaMKI_beta cd14169
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
4-240 7.85e-12

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271071 [Multi-domain]  Cd Length: 277  Bit Score: 63.37  E-value: 7.85e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDE---------------------EDSHRKGSN--------- 50
Cdd:cd14169     5 YELKEKLGEGAFSEVVLAQERGSQRLVALKcipKKALRGKEamveneiavlrrinhenivslEDIYESPTHlylamelvt 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 -----PRPLEASL-----VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLD---KDKGILkIADLGLSRafTVPLKAYTH 117
Cdd:cd14169    85 ggelfDRIIERGSytekdASQLIGQVLQAVKYLHQLGIVHRDLKPENLLYAtpfEDSKIM-ISDFGLSK--IEAQGMLST 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEvLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRllgtpTEQQWPGvmalrdwhvyPK 197
Cdd:cd14169   162 ACGTPGYVAPE-LLEQKPYGKAVDVWAIGVISYILLCGYPPFYDENDSELFNQILK-----AEYEFDS----------PY 225
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 198 WEpqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14169   226 WD---------DISESAKDFIRHLLERDPEKRFTCEQALQHPW 259
STKc_GRK3 cd05633
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3; STKs ...
1-167 7.97e-12

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK3, also called beta-adrenergic receptor kinase 2 (beta-ARK2), is widely expressed in many tissues. It is involved in modulating the cholinergic response of airway smooth muscles, and also plays a role in dopamine receptor regulation. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 promoter polymorphisms may also be associated with bipolar disorder. GRK3 contains an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270781 [Multi-domain]  Cd Length: 346  Bit Score: 63.93  E-value: 7.97e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDS---------------------------HRKGS- 49
Cdd:cd05633     4 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKcldKKRIKMKQGETlalnerimlslvstgdcpfivcmtyafHTPDKl 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 -------NPRPLEASLVQRFMF----------QLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTvpl 112
Cdd:cd05633    84 cfildlmNGGDLHYHLSQHGVFsekemrfyatEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFS--- 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 113 KAYTHEIV-TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRrqalfpGDSEFQQ 167
Cdd:cd05633   160 KKKPHASVgTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLR------GHSPFRQ 209
STKc_MLCK3 cd14192
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3; STKs catalyze ...
62-241 9.20e-12

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK3 (or MYLK3) phosphorylates myosin regulatory light chain 2 and controls the contraction of cardiac muscles. It is expressed specifically in both the atrium and ventricle of the heart and its expression is regulated by the cardiac protein Nkx2-5. MLCK3 plays an important role in cardiogenesis by regulating the assembly of cardiac sarcomeres, the repeating contractile unit of striated muscle. MLCK3 contains a single kinase domain near the C-terminus and a unique N-terminal half, and unlike MLCK1/2, it does not appear to be regulated by Ca2+/calmodulin. The MLCK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271094 [Multi-domain]  Cd Length: 261  Bit Score: 63.06  E-value: 9.20e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG-ILKIADLGLSRAFTvPLKAYTHEIVTLWYRAPEVlLGSTHYSTAV 140
Cdd:cd14192   107 FTRQICEGVHYLHQHYILHLDLKPENILCVNSTGnQIKIIDFGLARRYK-PREKLKVNFGTPEFLAPEV-VNYDFVSFPT 184
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 141 DIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrllgtpteqqwpgvmalrdwhVYPKWEPQdlSRAVPSLSPEGIDLLTQ 220
Cdd:cd14192   185 DMWSVGVITYMLLSGLSPFLGETDAETMNNI----------------------VNCKWDFD--AEAFENLSEEAKDFISR 240
                         170       180
                  ....*....|....*....|.
gi 1063706111 221 MLKYNPAERISAKAALDHPYF 241
Cdd:cd14192   241 LLVKEKSCRMSATQCLKHEWL 261
STKc_SnRK2 cd14662
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
3-153 1.02e-11

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK2 is represented in this cd. SnRK2s are involved in plant response to abiotic stresses and abscisic acid (ABA)-dependent plant development. The SnRK2s subfamily is in turn classed into three subgroups, all 3 of which are represented in this CD. Group 1 comprises kinases not activated by ABA, group 2 - kinases not activated or activated very weakly by ABA (depending on plant species), and group 3 - kinases strongly activated by ABA. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271132 [Multi-domain]  Cd Length: 257  Bit Score: 62.86  E-value: 1.02e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEE-----DSHRKGSNPR----------PLEASLVQ----- 60
Cdd:cd14662     1 RYELVKDIGSGNFGVARLMRNKETKELVAVKyiERGLKIDENvqreiINHRSLRHPNiirfkevvltPTHLAIVMeyaag 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 ------------------RFMF-QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGI-LKIADLGLSRAFTVPLKAYThEIV 120
Cdd:cd14662    81 gelfericnagrfsedeaRYFFqQLISGVSYCHSMQICHRDLKLENTLLDGSPAPrLKICDFGYSKSSVLHSQPKS-TVG 159
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1063706111 121 TLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMI 153
Cdd:cd14662   160 TPAYIAPEVLSRKEYDGKVADVWSCGVTLYVML 192
STKc_SRPK1 cd14216
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 1; STKs ...
49-241 1.27e-11

Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPK1 binds with high affinity the alternative splicing factor, SRSF1 (serine/arginine-rich splicing factor 1), and regiospecifically phosphorylates 10-12 serines in its RS domain. It plays a role in the regulation of pre-mRNA splicing, chromatin structure, and germ cell development. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271118 [Multi-domain]  Cd Length: 349  Bit Score: 63.51  E-value: 1.27e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 SNPRPLEASLVQRFMFQLFKGVAHCHSH-GVLHRDLKPQNLLL-----------------------------DKDKGILK 98
Cdd:cd14216   111 SNYQGLPLPCVKKIIRQVLQGLDYLHTKcRIIHTDIKPENILLsvneqyirrlaaeatewqrnflvnplepkNAEKLKVK 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  99 IADLGlsRAFTVPlKAYTHEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDS------EFQQLLHIF 172
Cdd:cd14216   191 IADLG--NACWVH-KHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSgedysrDEDHIALII 266
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 173 RLLG-TPTEQQWPG---------------VMALRDWHVY----PKWE-PQDLSRAVPslspegiDLLTQMLKYNPAERIS 231
Cdd:cd14216   267 ELLGkVPRKLIVAGkyskefftkkgdlkhITKLKPWGLFevlvEKYEwSQEEAAGFT-------DFLLPMLELIPEKRAT 339
                         250
                  ....*....|
gi 1063706111 232 AKAALDHPYF 241
Cdd:cd14216   340 AAECLRHPWL 349
STKc_SBK1 cd13987
Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1; STKs catalyze the ...
10-183 1.29e-11

Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SBK1, also called BSK146, is predominantly expressed in the brain. Its expression is increased in the developing brain during the late embryonic stage, coinciding with dramatic neuronal proliferation, migration, and maturation. SBK1 may play an important role in regulating brain development. The SBK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270889 [Multi-domain]  Cd Length: 259  Bit Score: 62.73  E-value: 1.29e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALK-----KTRLEmdeeDSHRK-------GSNPR------------------------- 52
Cdd:cd13987     1 LGEGTYGKVLLAVHKGSGTKMALKfvpkpSTKLK----DFLREynislelSVHPHiiktydvafetedyyvfaqeyapyg 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 ------PLEASL----VQRFMFQLFKGVAHCHSHGVLHRDLKPQN-LLLDKDKGILKIADLGLSRAF--TVPLKAYthei 119
Cdd:cd13987    77 dlfsiiPPQVGLpeerVKRCAAQLASALDFMHSKNLVHRDIKPENvLLFDKDCRRVKLCDFGLTRRVgsTVKRVSG---- 152
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 120 vTLWYRAPEVLLGSTHYSTAV----DIWSVG----CIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQW 183
Cdd:cd13987   153 -TIPYTAPEVCEAKKNEGFVVdpsiDVWAFGvllfCCLTGNFPWEKADSDDQFYEEFVRWQKRKNTAVPSQW 223
PKc_Pek1_like cd06621
Catalytic domain of fungal Pek1-like dual-specificity Mitogen-Activated Protein Kinase Kinases; ...
2-240 1.41e-11

Catalytic domain of fungal Pek1-like dual-specificity Mitogen-Activated Protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates Pmk1/Spm1 and is regulated by the MAPKK kinase Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKK kinase Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270793 [Multi-domain]  Cd Length: 287  Bit Score: 62.83  E-value: 1.41e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKT--------------RLE-----------------MDEEDSH----- 45
Cdd:cd06621     1 DKIVELSSLGEGAGGSVTKCRLRNTKTIFALKTIttdpnpdvqkqilrELEinkscaspyivkyygafLDEQDSSigiam 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 ---------------RKGSNpRPLEASLvQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTV 110
Cdd:cd06621    81 eyceggsldsiykkvKKKGG-RIGEKVL-GKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR-KGQVKLCDFGVSGELVN 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 PLkAYTHeIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQ----QLLHIFRLLGTPTEQQWPGV 186
Cdd:cd06621   158 SL-AGTF-TGTSYYMAPERIQGGP-YSITSDVWSLGLTLLEVAQNRFPFPPEGEPPlgpiELLSYIVNMPNPELKDEPEN 234
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 187 MAlrdwhvypKWepqdlSRAVPslspegiDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd06621   235 GI--------KW-----SESFK-------DFIEKCLEKDGTRRPGPWQMLAHPW 268
PTZ00263 PTZ00263
protein kinase A catalytic subunit; Provisional
4-166 1.57e-11

protein kinase A catalytic subunit; Provisional


Pssm-ID: 140289 [Multi-domain]  Cd Length: 329  Bit Score: 62.91  E-value: 1.57e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR----LEMDEEDSHRKgsnprplEASLVQR----FMFQLFKG------ 69
Cdd:PTZ00263   20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKkreiLKMKQVQHVAQ-------EKSILMElshpFIVNMMCSfqdenr 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  70 --------------------------VA------------HCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRafTVP 111
Cdd:PTZ00263   93 vyfllefvvggelfthlrkagrfpndVAkfyhaelvlafeYLHSKDIIYRDLKPENLLLDN-KGHVKVTDFGFAK--KVP 169
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 112 LKAYTHeIVTLWYRAPEVLLGSTHySTAVDIWSVGCIFAEMIRRQALFPGDSEFQ 166
Cdd:PTZ00263  170 DRTFTL-CGTPEYLAPEVIQSKGH-GKAVDWWTMGVLLYEFIAGYPPFFDDTPFR 222
PKc_MKK4 cd06616
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
5-168 1.91e-11

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 4; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270790 [Multi-domain]  Cd Length: 291  Bit Score: 62.38  E-value: 1.91e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   5 EKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHR--------KGSNPRPLeaslVQRFMFQLFK-GVA---- 71
Cdd:cd06616     9 KDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRllmdldvvMRSSDCPY----IVKFYGALFReGDCwicm 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  72 --------------HCH--------------------------SHGVLHRDLKPQNLLLDkDKGILKIADLGLSrAFTVP 111
Cdd:cd06616    85 elmdisldkfykyvYEVldsvipeeilgkiavatvkalnylkeELKIIHRDVKPSNILLD-RNGNIKLCDFGIS-GQLVD 162
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 112 LKAYTHEIVTLWYRAPEVLLGSTH---YSTAVDIWSVGCIFAEMIRRQALFPG-DSEFQQL 168
Cdd:cd06616   163 SIAKTRDAGCRPYMAPERIDPSASrdgYDVRSDVWSLGITLYEVATGKFPYPKwNSVFDQL 223
STKc_LATS1 cd05625
Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor 1; STKs catalyze the ...
57-247 2.24e-11

Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LATS1 functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. The LATS1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270775 [Multi-domain]  Cd Length: 382  Bit Score: 62.76  E-value: 2.24e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  57 SLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFT--------------------------- 109
Cdd:cd05625   101 DLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRwthdskyyqsgdhlrqdsmdfsnewgd 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 110 ----------VPL---------KAYTHEIV-TLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFpgdsefqqll 169
Cdd:cd05625   180 pencrcgdrlKPLerraarqhqRCLAHSLVgTPNYIAPEVLL-RTGYTQLCDWWSVGVILFEMLVGQPPF---------- 248
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 170 hifrLLGTPTEQQwpgvMALRDWHVYPKWEPQdlsravPSLSPEGIDLLTQMLKyNPAERISAKAALD---HPYFDSLDK 246
Cdd:cd05625   249 ----LAQTPLETQ----MKVINWQTSLHIPPQ------AKLSPEASDLIIKLCR-GPEDRLGKNGADEikaHPFFKTIDF 313

                  .
gi 1063706111 247 S 247
Cdd:cd05625   314 S 314
STKc_PAK5 cd06658
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 5; STKs catalyze the ...
9-241 2.39e-11

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. PAK5 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132989 [Multi-domain]  Cd Length: 292  Bit Score: 62.36  E-value: 2.39e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   9 KVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE------------DSHRK------GSNPRPLEASLVQRFM------- 63
Cdd:cd06658    29 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRrellfnevvimrDYHHEnvvdmyNSYLVGDELWVVMEFLeggaltd 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 ----------------FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAP 127
Cdd:cd06658   109 ivthtrmneeqiatvcLSVLRALSYLHNQGVIHRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAP 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 128 EVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrllgtpteqqwpgvmalRDwHVYPKWEPqdlSRAV 207
Cdd:cd06658   188 EV-ISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI------------------RD-NLPPRVKD---SHKV 244
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1063706111 208 PSLSPEGIDLltqMLKYNPAERISAKAALDHPYF 241
Cdd:cd06658   245 SSVLRGFLDL---MLVREPSQRATAQELLQHPFL 275
STKc_PLK1 cd14187
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 1; STKs catalyze the ...
59-243 2.88e-11

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK1 functions as a positive regulator of mitosis, meiosis, and cytokinesis. Its localization changes during mitotic progression; associating first with centrosomes in prophase, with kinetochores in prometaphase and metaphase, at the central spindle in anaphase, and in the midbody during telophase. It carries multiple functions throughout the cell cycle through interactions with differrent substrates at these specific subcellular locations. PLK1 is overexpressed in many human cancers and is associated with poor prognosis. The PLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271089 [Multi-domain]  Cd Length: 265  Bit Score: 61.87  E-value: 2.88e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVlLGSTHYST 138
Cdd:cd14187   109 ARYYLRQIILGCQYLHRNRVIHRDLKLGNLFLNDDMEV-KIGDFGLATKVEYDGERKKTLCGTPNYIAPEV-LSKKGHSF 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 139 AVDIWSVGCIFAEMirrqalfpgdsefqqllhifrLLGTPTEQqwpgVMALRDWHVYPKWEPQDLSRAVpslSPEGIDLL 218
Cdd:cd14187   187 EVDIWSIGCIMYTL---------------------LVGKPPFE----TSCLKETYLRIKKNEYSIPKHI---NPVAASLI 238
                         170       180
                  ....*....|....*....|....*
gi 1063706111 219 TQMLKYNPAERISAKAALDHPYFDS 243
Cdd:cd14187   239 QKMLQTDPTARPTINELLNDEFFTS 263
STKc_SGK cd05575
Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase; ...
10-245 3.16e-11

Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270727 [Multi-domain]  Cd Length: 323  Bit Score: 61.95  E-value: 3.16e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALK-------KTRLE----MDEEDSHRKGSNpRPLEASLvqRFMFQ------------- 65
Cdd:cd05575     3 IGKGSFGKVLLARHKAEGKLYAVKvlqkkaiLKRNEvkhiMAERNVLLKNVK-HPFLVGL--HYSFQtkdklyfvldyvn 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 ---LF----------------------KGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHEIV 120
Cdd:cd05575    80 ggeLFfhlqrerhfpeprarfyaaeiaSALGYLHSLNIIYRDLKPENILLDS-QGHVVLTDFGLCKEGIEPSDTTSTFCG 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIrrQALFPGDSE-----FQQLLHifrllgtpteQQwpgvMALRdwhvy 195
Cdd:cd05575   159 TPEYLAPEVLRKQP-YDRTVDWWCLGAVLYEML--YGLPPFYSRdtaemYDNILH----------KP----LRLR----- 216
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 196 pkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAAL----DHPYFDSLD 245
Cdd:cd05575   217 ------------TNVSPSARDLLEGLLQKDRTKRLGSGNDFleikNHSFFRPIN 258
STKc_PKB_alpha cd05594
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B alpha (also called Akt1); ...
1-244 3.67e-11

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B alpha (also called Akt1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. The PKB-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270746 [Multi-domain]  Cd Length: 356  Bit Score: 61.97  E-value: 3.67e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVA---LKKTRLEMDEEDSHRKGSNpRPLEAS-----LVQRFMFQ------- 65
Cdd:cd05594    24 MNDFEYLKLLGKGTFGKVILVKEKATGRYYAmkiLKKEVIVAKDEVAHTLTEN-RVLQNSrhpflTALKYSFQthdrlcf 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 -------------------------------LFKGVAHCHSH-GVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLK 113
Cdd:cd05594   103 vmeyanggelffhlsrervfsedrarfygaeIVSALDYLHSEkNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGA 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 114 AYTHEIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMI-RRQALFPGDSEfqqllHIFRLLgtpteqqwpgvmaLRDW 192
Cdd:cd05594   182 TMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMcGRLPFYNQDHE-----KLFELI-------------LMEE 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 193 HVYPKwepqdlsravpSLSPEGIDLLTQMLKYNPAERI-----SAKAALDHPYFDSL 244
Cdd:cd05594   243 IRFPR-----------TLSPEAKSLLSGLLKKDPKQRLgggpdDAKEIMQHKFFAGI 288
STKc_TAO1 cd06635
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 1; STKs catalyze ...
4-171 4.94e-11

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. TAO proteins possess MAPK kinase kinase activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The TAO1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270805 [Multi-domain]  Cd Length: 317  Bit Score: 61.60  E-value: 4.94e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDS---------------------HRKGSNPRPLEASLVQRF 62
Cdd:cd06635    27 FSDLREIGHGSFGAVYFARDVRTSEVVAIKKMSYSGKQSNEkwqdiikevkflqrikhpnsiEYKGCYLREHTAWLVMEY 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 -------MFQLFK-----------------GVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGlSRAFTVPLKAYthe 118
Cdd:cd06635   107 clgsasdLLEVHKkplqeieiaaithgalqGLAYLHSHNMIHRDIKAGNILL-TEPGQVKLADFG-SASIASPANSF--- 181
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 119 IVTLWYRAPEVLLG--STHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHI 171
Cdd:cd06635   182 VGTPYWMAPEVILAmdEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 236
STKc_RIP1 cd14027
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 1; STKs catalyze ...
51-145 7.33e-11

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP1 harbors a C-terminal Death domain (DD), which binds death receptors (DRs) including TNF receptor 1, Fas, TNF-related apoptosis-inducing ligand receptor 1 (TRAILR1), and TRAILR2. It also interacts with other DD-containing adaptor proteins such as TRADD and FADD. RIP1 can also recruit other kinases including MEKK1, MEKK3, and RIP3 through an intermediate domain (ID) that bears a RIP homotypic interaction motif (RHIM). RIP1 plays a crucial role in determining a cell's fate, between survival or death, following exposure to stress signals. It is important in the signaling of NF-kappaB and MAPKs, and it links DR-associated signaling to reactive oxygen species (ROS) production. Abnormal RIP1 function may result in ROS accummulation affecting inflammatory responses, innate immunity, stress responses, and cell survival. RIP kinases serve as essential sensors of cellular stress. The RIP1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270929 [Multi-domain]  Cd Length: 267  Bit Score: 60.59  E-value: 7.33e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 PRPLeaSLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGL-------------SRAFTVPLKAYTH 117
Cdd:cd14027    86 SVPL--SVKGRIILEIIEGMAYLHGKGVIHKDLKPENILVDNDFHI-KIADLGLasfkmwskltkeeHNEQREVDGTAKK 162
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1063706111 118 EIVTLWYRAPEVLLG--------STHYSTAVDIWSV 145
Cdd:cd14027   163 NAGTLYYMAPEHLNDvnakptekSDVYSFAIVLWAI 198
STKc_Nek10 cd08528
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
4-159 7.43e-11

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 10; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Nek10 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270867 [Multi-domain]  Cd Length: 270  Bit Score: 60.59  E-value: 7.43e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTG-KLVALK-------------------------------------------KTRLEM 39
Cdd:cd08528     2 YAVLELLGSGAFGCVYKVRKKSNGqTLLALKeinmtnpafgrteqerdksvgdiisevniikeqlrhpnivryyKTFLEN 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  40 D---------------EEDSHRKGSNPRPLEASLVQRFMfQLFKGVAHCHSH-GVLHRDLKPQNLLL-DKDKgiLKIADL 102
Cdd:cd08528    82 DrlyivmeliegaplgEHFSSLKEKNEHFTEDRIWNIFV-QMVLALRYLHKEkQIVHRDLKPNNIMLgEDDK--VTITDF 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 103 GLSRAFTVPLKAYTHEIVTLWYRAPEVLlGSTHYSTAVDIWSVGCIFAEMIRRQALF 159
Cdd:cd08528   159 GLAKQKGPESSKMTSVVGTILYSCPEIV-QNEPYGEKADIWALGCILYQMCTLQPPF 214
STKc_myosinIIIA_N cd06638
N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIA myosin; STKs catalyze ...
2-152 7.75e-11

N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIA myosin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132969 [Multi-domain]  Cd Length: 286  Bit Score: 60.80  E-value: 7.75e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK------KTRLEMDEEDSHRKGSNPRP---------------------- 53
Cdd:cd06638    18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKildpihDIDEEIEAEYNILKALSDHPnvvkfygmyykkdvkngdqlwl 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 -----------------------LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTV 110
Cdd:cd06638    98 vlelcnggsvtdlvkgflkrgerMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGV-KLVDFGVSAQLTS 176
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 111 PLKAYTHEIVTLWYRAPEVL-----LGSThYSTAVDIWSVGCIFAEM 152
Cdd:cd06638   177 TRLRRNTSVGTPFWMAPEVIaceqqLDST-YDARCDVWSLGITAIEL 222
STKc_CaMKK1 cd14200
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1; ...
69-240 9.58e-11

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). CaMKK1, also called CaMKK alpha, is involved in the regulation of glucose uptake in skeletal muscles, independently of AMPK and PKB activation. It also play roles in learning and memory. Studies on CaMKK1 knockout mice reveal deficits in fear conditioning. The CaMKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271102 [Multi-domain]  Cd Length: 284  Bit Score: 60.35  E-value: 9.58e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLL--GSTHYSTAVDIWSVG 146
Cdd:cd14200   136 GIEYLHYQKIVHRDIKPSNLLLG-DDGHVKIADFGVSNQFEGNDALLSSTAGTPAFMAPETLSdsGQSFSGKALDVWAMG 214
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 147 CIfaemirrqalfpgdsefqqlLHIFRLLGTPTEQQWpgVMALrdwHVYPKWEPQDLSRAvPSLSPEGIDLLTQMLKYNP 226
Cdd:cd14200   215 VT--------------------LYCFVYGKCPFIDEF--ILAL---HNKIKNKPVEFPEE-PEISEELKDLILKMLDKNP 268
                         170
                  ....*....|....
gi 1063706111 227 AERISAKAALDHPY 240
Cdd:cd14200   269 ETRITVPEIKVHPW 282
STKc_Titin cd14104
Catalytic domain of the Giant Serine/Threonine Kinase Titin; STKs catalyze the transfer of the ...
65-240 1.06e-10

Catalytic domain of the Giant Serine/Threonine Kinase Titin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Titin, also called connectin, is a muscle-specific elastic protein and is the largest known protein to date. It contains multiple immunoglobulin (Ig)-like and fibronectin type III (FN3) domains, and a single kinase domain near the C-terminus. It spans half of the sarcomere, the repeating contractile unit of striated muscle, and performs mechanical and catalytic functions. Titin contributes to the passive force generated when muscle is stretched during relaxation. Its kinase domain phosphorylates and regulates the muscle protein telethonin, which is required for sarcomere formation in differentiating myocytes. In addition, titin binds many sarcomere proteins and acts as a molecular scaffold for filament formation during myofibrillogenesis. The Titin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271006 [Multi-domain]  Cd Length: 277  Bit Score: 60.26  E-value: 1.06e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG-ILKIADLGLSRAFTvPLKAYTHEIVTLWYRAPEVlLGSTHYSTAVDIW 143
Cdd:cd14104   105 QVCEALEFLHSKNIGHFDIRPENIIYCTRRGsYIKIIEFGQSRQLK-PGDKFRLQYTSAEFYAPEV-HQHESVSTATDMW 182
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 144 SVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtpteqqwpgvmalrdwhvypKWEPQDlsRAVPSLSPEGIDLLTQMLK 223
Cdd:cd14104   183 SLGCLVYVLLSGINPFEAETNQQTIENIRNA----------------------EYAFDD--EAFKNISIEALDFVDRLLV 238
                         170
                  ....*....|....*..
gi 1063706111 224 YNPAERISAKAALDHPY 240
Cdd:cd14104   239 KERKSRMTAQEALNHPW 255
STKc_MLCK2 cd14190
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 2; STKs catalyze ...
8-241 1.08e-10

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK2 (or MYLK2) phosphorylates myosin regulatory light chain and controls the contraction of skeletal muscles. MLCK2 contains a single kinase domain near the C-terminus followed by a regulatory segment containing an autoinhibitory Ca2+/calmodulin binding site. The MLCK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271092 [Multi-domain]  Cd Length: 261  Bit Score: 60.32  E-value: 1.08e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGKLVALKKTR-----------LEMD--EEDSHRK-------GSNPRPL--------EASLV 59
Cdd:cd14190    10 EVLGGGKFGKVHTCTEKRTGLKLAAKVINkqnskdkemvlLEIQvmNQLNHRNliqlyeaIETPNEIvlfmeyveGGELF 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  60 QR---------------FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG-ILKIADLGLSRAFTvPLKAYTHEIVTLW 123
Cdd:cd14190    90 ERivdedyhltevdamvFVRQICEGIQFMHQMRVLHLDLKPENILCVNRTGhQVKIIDFGLARRYN-PREKLKVNFGTPE 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 124 YRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIfrLLGtpteqqwpgvmalrDWHVYpkwepqdl 203
Cdd:cd14190   169 FLSPEV-VNYDQVSFPTDMWSMGVITYMLLSGLSPFLGDDDTETLNNV--LMG--------------NWYFD-------- 223
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1063706111 204 SRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14190   224 EETFEHVSDEAKDFVSNLIIKERSARMSATQCLKHPWL 261
STKc_PKB_gamma cd05593
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B gamma (also called Akt3); ...
1-153 1.31e-10

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B gamma (also called Akt3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. The PKB-gamma subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270745 [Multi-domain]  Cd Length: 348  Bit Score: 60.48  E-value: 1.31e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEM---DEEDSH-----RKGSNPR-PLEASLVQRF--------- 62
Cdd:cd05593    14 MNDFDYLKLLGKGTFGKVILVREKASGKYYAMKILKKEViiaKDEVAHtltesRVLKNTRhPFLTSLKYSFqtkdrlcfv 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 --------MF-------------------QLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAY 115
Cdd:cd05593    94 meyvnggeLFfhlsrervfsedrtrfygaEIVSALDYLHSGKIVYRDLKLENLMLDKD-GHIKITDFGLCKEGITDAATM 172
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1063706111 116 THEIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMI 153
Cdd:cd05593   173 KTFCGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMM 209
PTKc_Jak1_rpt2 cd05079
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1; PTKs catalyze the ...
61-233 1.40e-10

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Jak1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173644 [Multi-domain]  Cd Length: 284  Bit Score: 59.94  E-value: 1.40e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYT----HEIVTLWYrAPEVLLGSTHY 136
Cdd:cd05079   113 KYAVQICKGMDYLGSRQYVHRDLAARNVLVE-SEHQVKIGDFGLTKAIETDKEYYTvkddLDSPVFWY-APECLIQSKFY 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 137 sTAVDIWSVGCIFAEMirrqaLFPGDSEFQQLLHIFRLLGtPTEQQWPGVMALRDWHvypkwEPQDLSRavPSLSPEGID 216
Cdd:cd05079   191 -IASDVWSFGVTLYEL-----LTYCDSESSPMTLFLKMIG-PTHGQMTVTRLVRVLE-----EGKRLPR--PPNCPEEVY 256
                         170
                  ....*....|....*...
gi 1063706111 217 -LLTQMLKYNPAERISAK 233
Cdd:cd05079   257 qLMRKCWEFQPSKRTTFQ 274
STKc_Trio_C cd14113
C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide ...
59-241 1.41e-10

C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide Exchange Factor, Triple functional domain protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Triple functional domain protein (Trio), also called PTPRF-interacting protein, is a large multidomain protein containing a series of spectrin-like repeats, two each of RhoGEF and SH3 domains, an immunoglobulin-like (Ig) domain and a C-terminal kinase. Trio plays important roles in neuronal cell migration and axon guidance. It was originally identified as an interacting partner of the of the receptor-like tyrosine phosphatase (RPTP) LAR (leukocyte-antigen-related protein), a family of receptors that function in the signaling to the actin cytoskeleton during development. Trio functions as a GEF for Rac1, RhoG, and RhoA, and is involved in the regulation of lamellipodia formation, mediating Rac1-dependent cell spreading and migration. The Trio subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271015 [Multi-domain]  Cd Length: 263  Bit Score: 59.99  E-value: 1.41e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKD--KGILKIADLGlsRAFTVPLKAYTHEIV-TLWYRAPEVLLGSTh 135
Cdd:cd14113   105 IRFYLREILEALQYLHNCRIAHLDLKPENILVDQSlsKPTIKLADFG--DAVQLNTTYYIHQLLgSPEFAAPEIILGNP- 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 136 YSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtpteqqwpgvmalrDWHVypkwePQDLSRAVPSLSPEGI 215
Cdd:cd14113   182 VSLTSDLWSIGVLTYVLLSGVSPFLDESVEETCLNICRL----------------DFSF-----PDDYFKGVSQKAKDFV 240
                         170       180
                  ....*....|....*....|....*.
gi 1063706111 216 DLLTQMlkyNPAERISAKAALDHPYF 241
Cdd:cd14113   241 CFLLQM---DPAKRPSAALCLQEQWL 263
STKc_BMPR1a cd14220
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IA Receptor; ...
54-232 1.61e-10

Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IA Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1a, also called Activin receptor-Like Kinase 3 (ALK3), functions as a receptor for bone morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Germline mutations in BMPR1a are associated with an increased risk to Juvenile Polyposis Syndrome, a hamartomatous disorder that may lead to gastrointestinal cancer. BMPR1a may also play an indirect role in the development of hematopoietic stem cells (HSCs) as osteoblasts are a major component of the HSC niche within the bone marrow. BMPR1a belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1a, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1a subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271122 [Multi-domain]  Cd Length: 287  Bit Score: 60.05  E-value: 1.61e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSH--------GVLHRDLKPQNLLLdKDKGILKIADLGLSRAFT-------VPLKAythE 118
Cdd:cd14220    89 LDTRALLKLAYSAACGLCHLHTEiygtqgkpAIAHRDLKSKNILI-KKNGTCCIADLGLAVKFNsdtnevdVPLNT---R 164
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 119 IVTLWYRAPEVL---LGSTHYSTAV--DIWSVGCIFAEMIRRqALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWH 193
Cdd:cd14220   165 VGTKRYMAPEVLdesLNKNHFQAYImaDIYSFGLIIWEMARR-CVTGGIVEEYQLPYYDMVPSDPSYEDMREVVCVKRLR 243
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 194 --VYPKWEPQDLSRAVpslspegIDLLTQMLKYNPAERISA 232
Cdd:cd14220   244 ptVSNRWNSDECLRAV-------LKLMSECWAHNPASRLTA 277
STKc_DAPK cd14105
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase; STKs ...
4-240 1.91e-10

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK1 is the prototypical member of the subfamily and is also simply referred to as DAPK. DAPK2 is also called DAPK-related protein 1 (DRP-1), while DAPK3 has also been named DAP-like kinase (DLK) and zipper-interacting protein kinase (ZIPk). These proteins are ubiquitously expressed in adult tissues, are capable of cross talk with each other, and may act synergistically in regulating cell death. The DAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271007 [Multi-domain]  Cd Length: 269  Bit Score: 59.42  E-value: 1.91e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVA--------LKKTRLEMDEEDSHRKGSNPRPLEASLVQR-------------- 61
Cdd:cd14105     7 YDIGEELGSGQFAVVKKCREKSTGLEYAakfikkrrSKASRRGVSREDIEREVSILRQVLHPNIITlhdvfenktdvvli 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 --------------------------FMFQLFKGVAHCHSHGVLHRDLKPQN-LLLDKDKGI--LKIADLGLSRAFTvPL 112
Cdd:cd14105    87 lelvaggelfdflaekeslseeeateFLKQILDGVNYLHTKNIAHFDLKPENiMLLDKNVPIprIKLIDFGLAHKIE-DG 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 113 KAYTHEIVTLWYRAPEVL----LGsthysTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMA 188
Cdd:cd14105   166 NEFKNIFGTPEFVAPEIVnyepLG-----LEADMWSIGVITYILLSGASPFLGDTKQETLANITAVNYDFDDEYFSNTSE 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 189 LRDwhvypkwepqdlsravpslspegiDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14105   241 LAK------------------------DFIRQLLVKDPRKRMTIQESLRHPW 268
STKc_PKA cd14209
Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase; STKs catalyze ...
65-152 1.93e-10

Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271111 [Multi-domain]  Cd Length: 290  Bit Score: 59.72  E-value: 1.93e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGlsraFTVPLKAYTHEIV-TLWYRAPEVLLgSTHYSTAVDIW 143
Cdd:cd14209   109 QIVLAFEYLHSLDLIYRDLKPENLLIDQ-QGYIKVTDFG----FAKRVKGRTWTLCgTPEYLAPEIIL-SKGYNKAVDWW 182

                  ....*....
gi 1063706111 144 SVGCIFAEM 152
Cdd:cd14209   183 ALGVLIYEM 191
STKc_PAK4 cd06657
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 4; STKs catalyze the ...
9-241 1.94e-10

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. PAK4 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132988 [Multi-domain]  Cd Length: 292  Bit Score: 59.65  E-value: 1.94e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   9 KVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEE------------DSHRKG------SNPRPLEASLVQRFM------- 63
Cdd:cd06657    27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRrellfnevvimrDYQHENvvemynSYLVGDELWVVMEFLeggaltd 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 ----------------FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAP 127
Cdd:cd06657   107 ivthtrmneeqiaavcLAVLKALSVLHAQGVIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 128 EvLLGSTHYSTAVDIWSVGCIFAEMIRrqalfpgdsefqqllhifrllGTPTEQQWPGVMAL---RDwHVYPKWepQDLS 204
Cdd:cd06657   186 E-LISRLPYGPEVDIWSLGIMVIEMVD---------------------GEPPYFNEPPLKAMkmiRD-NLPPKL--KNLH 240
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1063706111 205 RAVPSLSpegiDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd06657   241 KVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 273
PK_TRB cd13976
Pseudokinase domain of Tribbles Homolog proteins; The pseudokinase domain shows similarity to ...
16-241 1.97e-10

Pseudokinase domain of Tribbles Homolog proteins; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Tribbles Homolog (TRB) proteins interact with many proteins involved in signaling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, differentiation, and gene expression. TRB proteins bind to the middle kinase in mitogen activated protein kinase (MAPK) signaling cascades, MAPK kinases. They regulate the activity of MAPK kinases, and thus, affect MAPK signaling. In Drosophila, Tribbles regulates String, the ortholog of mammalian Cdc25, during morphogenesis. String is implicated in the progression of mitosis during embryonic development. Vertebrates contain three TRB proteins encoded by three separate genes: Tribbles-1 (TRB1 or TRIB1), Tribbles-2 (TRB2 or TRIB2), and Tribbles-3 (TRB3 or TRIB3). The TRB subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270878 [Multi-domain]  Cd Length: 242  Bit Score: 58.98  E-value: 1.97e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  16 GKVYKAMEKTTGKLVALKKTRLEMDEEDShrkgsnprpleaslvQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDK 94
Cdd:cd13976    58 TKAYVFFERDHGDLHSYVRSRKRLREPEA---------------ARLFRQIASAVAHCHRNGIVLRDLKLRKFVFaDEER 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  95 GILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYS-TAVDIWSVGCIFAEMIRRQALFpGDSEFQQLLHIFR 173
Cdd:cd13976   123 TKLRLESLEDAVILEGEDDSLSDKHGCPAYVSPEILNSGATYSgKAADVWSLGVILYTMLVGRYPF-HDSEPASLFAKIR 201
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063706111 174 llgtpteqqwpgvmalRDWHVYPKwepqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd13976   202 ----------------RGQFAIPE-----------TLSPRARCLIRSLLRREPSERLTAEDILLHPWL 242
STKc_WNK4 cd14033
Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 4; STKs catalyze ...
52-173 1.99e-10

Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNK4 shows a restricted expression pattern and is usually found in epithelial cells. It is expressed in nephrons and in extrarenal tissues including intestine, eye, mammary glands, and prostate. WNK4 regulates a variety of ion transport proteins including apical or basolateral ion transporters, ion channels in the transcellular pathway, and claudins in the paracellular pathway. Mutations in WNK4 cause PseudoHypoAldosteronism type II (PHAII), characterized by hypertension and hyperkalemia. WNK4 inhibits the activity of the thiazide-sensitive Na-Cl cotransporter (NCC), which is responsible for about 15% of NaCl reabsorption in the kidney. It also inhibits the renal outer medullary potassium channel (ROMK) and decreases its surface expression. Hypertension and hyperkalemia in PHAII patients with WNK4 mutations may be partly due to increased NaCl reabsorption through NCC and impaired renal potassium secretion by ROMK, respectively. The WNK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270935 [Multi-domain]  Cd Length: 261  Bit Score: 59.25  E-value: 1.99e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRFMFQLFKGVAHCHSHG--VLHRDLKPQNLLLDKDKGILKIADLGLSrafTVPLKAYTHEIV-TLWYRAPE 128
Cdd:cd14033    99 REMKLKLLQRWSRQILKGLHFLHSRCppILHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKSVIgTPEFMAPE 175
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 129 VLlgSTHYSTAVDIWSVGCIFAEMIRRQALFpgdSEFQQLLHIFR 173
Cdd:cd14033   176 MY--EEKYDEAVDVYAFGMCILEMATSEYPY---SECQNAAQIYR 215
STKc_LRRK2 cd14068
Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 2; STKs catalyze ...
29-189 2.17e-10

Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRK2 is one of two vertebrate LRRKs which show complementary expression in the brain. Mutations in LRRK2, found in the kinase, ROC-COR, and WD40 domains, are linked to both familial and sporadic forms of Parkinson's disease. The most prevalent mutation, G2019S located in the activation loop of the kinase domain, increases kinase activity. The R1441C/G mutations in the GTPase domain have also been reported to influence kinase activity. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. The LRRK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270970 [Multi-domain]  Cd Length: 252  Bit Score: 59.20  E-value: 2.17e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  29 LVALKKTRLEMDEEDSHRKGSNPRPLEaslvQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG----ILKIADLGL 104
Cdd:cd14068    62 LVMELAPKGSLDALLQQDNASLTRTLQ----HRIALHVADGLRYLHSAMIIYRDLKPHNVLLFTLYPncaiIAKIADYGI 137
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 105 SRaFTVPLKAYTHEiVTLWYRAPEVLLGSTHYSTAVDIWSVGCIF------AEMIRRQALFPgdSEFQQlLHIFRLLGTP 178
Cdd:cd14068   138 AQ-YCCRMGIKTSE-GTPGFRAPEVARGNVIYNQQADVYSFGLLLydiltcGERIVEGLKFP--NEFDE-LAIQGKLPDP 212
                         170
                  ....*....|....*
gi 1063706111 179 TEQ----QWPGVMAL 189
Cdd:cd14068   213 VKEygcaPWPGVEAL 227
STKc_cPKC_beta cd05616
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs ...
7-245 2.21e-10

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG (1,2-diacylglycerol) in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG, and in most cases, phosphatidylserine (PS) for activation. The cPKC-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270767 [Multi-domain]  Cd Length: 323  Bit Score: 59.63  E-value: 2.21e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   7 LEKVGEGTYGKVYKAMEKTTGKLVALK--KTRLEMDEEDSHRKGSNPRPLEASLVQRFMFQL------------------ 66
Cdd:cd05616     5 LMVLGKGSFGKVMLAERKGTDELYAVKilKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLhscfqtmdrlyfvmeyvn 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  67 -------------FK-------------GVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFT---VPLKAYTH 117
Cdd:cd05616    85 ggdlmyhiqqvgrFKephavfyaaeiaiGLFFLQSKGIIYRDLKLDNVMLDSE-GHIKIADFGMCKENIwdgVTTKTFCG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 eivTLWYRAPEVLlGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSE---FQQLLhifrllgtpteqqwpgvmalrDWHV 194
Cdd:cd05616   164 ---TPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEdelFQSIM---------------------EHNV 218
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 195 -YPKwepqdlsravpSLSPEGIDLLTQMLKYNPAERISA-----KAALDHPYFDSLD 245
Cdd:cd05616   219 aYPK-----------SMSKEAVAICKGLMTKHPGKRLGCgpegeRDIKEHAFFRYID 264
PK_TRB3 cd14024
Pseudokinase domain of Tribbles Homolog 3; The pseudokinase domain shows similarity to protein ...
18-240 2.36e-10

Pseudokinase domain of Tribbles Homolog 3; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. TRB3 binds and regulates ATF4, p65/RelA, and PKB (or Akt). It negatively regulates ATF4-mediated gene expression including that of CHOP (C/EBP homologous protein) and HO-1, which are both involved in modulating apoptosis. It also inhibits insulin-mediated phosphorylation of PKB and is a possible determinant of insulin resistance and related disorders. In osteoarthritic chondrocytes where it inhibits insulin-like growth factor 1-mediated cell survival, TRB3 is overexpressed, resulting in increased cell death. TRB3 is one of three Tribbles Homolog (TRB) proteins present in vertebrates that are encoded by three separate genes. TRB proteins interact with many proteins involved in signalling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, and gene expression. The TRB3 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270926 [Multi-domain]  Cd Length: 242  Bit Score: 59.12  E-value: 2.36e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  18 VYKAMEKTTGKLVALKKTRLEMDEEDShrkgsnprpleaslvQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGIL 97
Cdd:cd14024    60 AYAFFSRHYGDMHSHVRRRRRLSEDEA---------------RGLFTQMARAVAHCHQHGVILRDLKLRRFVF-TDELRT 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  98 KIADLGLSRAFTVplkayTHEIVTLW-------YRAPEVLLGSTHYS-TAVDIWSVGCIFAEMIRRQALFPgDSEFQQLL 169
Cdd:cd14024   124 KLVLVNLEDSCPL-----NGDDDSLTdkhgcpaYVGPEILSSRRSYSgKAADVWSLGVCLYTMLLGRYPFQ-DTEPAALF 197
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 170 HIFRllgtpteqqwPGVMALRDWhvypkwepqdlsravpsLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14024   198 AKIR----------RGAFSLPAW-----------------LSPGARCLVSCMLRRSPAERLKASEILLHPW 241
STKc_CK1 cd14016
Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1; STKs catalyze the ...
3-106 2.46e-10

Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CK1 phosphorylates a variety of substrates including enzymes, transcription and splice factors, cytoskeletal proteins, viral oncogenes, receptors, and membrane-associated proteins. There are mutliple isoforms of CK1 and in mammals, seven isoforms (alpha, beta, gamma1-3, delta, and epsilon) have been characterized. These isoforms differ mainly in the length and structure of their C-terminal non-catalytic region. Some isoforms have several splice variants such as the long (L) and short (S) variants of CK1alpha. CK1 proteins are involved in the regulation of many cellular processes including membrane transport processes, circadian rhythm, cell division, apoptosis, and the development of cancer and neurodegenerative diseases. The CK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270918 [Multi-domain]  Cd Length: 266  Bit Score: 59.01  E-value: 2.46e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKktrLEMDEEDSHR-----------KGSN--PRP---------------- 53
Cdd:cd14016     1 RYKLVKKIGSGSFGEVYLGIDLKTGEEVAIK---IEKKDSKHPQleyeakvykllQGGPgiPRLywfgqegdynvmvmdl 77
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMF---------------QLFKGVAHCHSHGVLHRDLKPQNLL--LDKDKGILKIADLGLSR 106
Cdd:cd14016    78 LGPSLEDLFNKcgrkfslktvlmladQMISRLEYLHSKGYIHRDIKPENFLmgLGKNSNKVYLIDFGLAK 147
STKc_IKK cd13989
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
11-153 2.67e-10

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The IKK complex functions as a master regulator of Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. It is composed of two kinases, IKKalpha and IKKbeta, and the regulatory subunit IKKgamma or NEMO (NF-kB Essential MOdulator). IKKs facilitate the release of NF-kB dimers from an inactive state, allowing them to migrate to the nucleus where they regulate gene transcription. There are two IKK pathways that regulate NF-kB signaling, called the classical (involving IKKbeta and NEMO) and non-canonical (involving IKKalpha) pathways. The classical pathway regulates the majority of genes activated by NF-kB. The IKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270891 [Multi-domain]  Cd Length: 289  Bit Score: 59.38  E-value: 2.67e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  11 GEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHR----------KGSN----------PRPLEASLVQRFMF------ 64
Cdd:cd13989     2 GSGGFGYVTLWKHQDTGEYVAIKKCRQELSPSDKNRerwclevqimKKLNhpnvvsardvPPELEKLSPNDLPLlameyc 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 ----------------------------QLFKGVAHCHSHGVLHRDLKPQNLLLDK--DKGILKIADLGLSRAFTvPLKA 114
Cdd:cd13989    82 sggdlrkvlnqpenccglkesevrtllsDISSAISYLHENRIIHRDLKPENIVLQQggGRVIYKLIDLGYAKELD-QGSL 160
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1063706111 115 YTHEIVTLWYRAPEvLLGSTHYSTAVDIWSVGCIFAEMI 153
Cdd:cd13989   161 CTSFVGTLQYLAPE-LFESKKYTCTVDYWSFGTLAFECI 198
STKc_ROCK cd05596
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
74-163 2.77e-10

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270747 [Multi-domain]  Cd Length: 352  Bit Score: 59.70  E-value: 2.77e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDKdKGILKIADLG---------LSRAFTVplkaytheIVTLWYRAPEVLL---GSTHYSTAVD 141
Cdd:cd05596   142 HSMGFVHRDVKPDNMLLDA-SGHLKLADFGtcmkmdkdgLVRSDTA--------VGTPDYISPEVLKsqgGDGVYGRECD 212
                          90       100
                  ....*....|....*....|..
gi 1063706111 142 IWSVGCIFAEMIRRQALFPGDS 163
Cdd:cd05596   213 WWSVGVFLYEMLVGDTPFYADS 234
STKc_GAK cd14036
Catalytic domain of the Serine/Threonine protein kinase, cyclin G-Associated Kinase; STKs ...
43-159 2.85e-10

Catalytic domain of the Serine/Threonine protein kinase, cyclin G-Associated Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GAK, also called auxilin-2, contains an N-terminal kinase domain that phosphorylates the mu subunits of adaptor protein (AP) 1 and AP2. In addition, it contains an auxilin-1-like domain structure consisting of PTEN-like, clathrin-binding, and J domains. Like auxilin-1, GAK facilitates Hsc70-mediated dissociation of clathrin from clathrin-coated vesicles. GAK is expressed ubiquitously and is enriched in the Golgi, unlike auxilin-1 which is nerve-specific. GAK also plays regulatory roles outside of clathrin-mediated membrane traffic including the maintenance of centrosome integrity and chromosome congression, neural patterning, survival of neurons, and immune responses through interaction with the interleukin 12 receptor. It also interacts with the androgen receptor, acting as a transcriptional coactivator, and its expression is significantly increased with the progression of prostate cancer. The GAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270938 [Multi-domain]  Cd Length: 282  Bit Score: 59.06  E-value: 2.85e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 DSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHG--VLHRDLKPQNLLLdKDKGILKIADLGlsRAFTVPL------KA 114
Cdd:cd14036    94 DFVKKVEAPGPFSPDTVLKIFYQTCRAVQHMHKQSppIIHRDLKIENLLI-GNQGQIKLCDFG--SATTEAHypdyswSA 170
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 115 YTHEIV--------TLWYRAPEVLLGSTHY--STAVDIWSVGCIFAEMIRRQALF 159
Cdd:cd14036   171 QKRSLVedeitrntTPMYRTPEMIDLYSNYpiGEKQDIWALGCILYLLCFRKHPF 225
PTKc_VEGFR1 cd14207
Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; ...
34-229 2.91e-10

Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR1 (or Flt1) binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. VEGFR1 is a member of the VEGFR subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The VEGFR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271109 [Multi-domain]  Cd Length: 340  Bit Score: 59.25  E-value: 2.91e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  34 KTRLEMDEEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAF----- 108
Cdd:cd14207   157 KSLSDVEEEEEDSGDFYKRPLTMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENN-VVKICDFGLARDIyknpd 235
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 109 -------TVPLKaytheivtlwYRAPEVLLGSThYSTAVDIWSVGCIFAEmirrqalfpgdsefqqllhIFRLLGTPteq 181
Cdd:cd14207   236 yvrkgdaRLPLK----------WMAPESIFDKI-YSTKSDVWSYGVLLWE-------------------IFSLGASP--- 282
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 182 qWPGVMALRDWhvYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAER 229
Cdd:cd14207   283 -YPGVQIDEDF--CSKLKEGIRMRAPEFATSEIYQIMLDCWQGDPNER 327
STKc_MLK1 cd14145
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 1; STKs catalyze the ...
8-161 3.14e-10

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK1 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK) and is also called MAP3K9. MAP3Ks phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Little is known about the specific function of MLK1. It is capable of activating the c-Jun N-terminal kinase pathway. Mice lacking both MLK1 and MLK2 are viable, fertile, and have normal life spans. There could be redundancy in the function of MLKs. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271047 [Multi-domain]  Cd Length: 270  Bit Score: 58.90  E-value: 3.14e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMekTTGKLVALKKTRLEMDEEDSH----------------------------------------RK 47
Cdd:cd14145    12 EIIGIGGFGKVYRAI--WIGDEVAVKAARHDPDEDISQtienvrqeaklfamlkhpniialrgvclkepnlclvmefaRG 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 GSNPRPLEAS-----LVQRFMFQLFKGVAHCHSHG---VLHRDLKPQNLLL-------DKDKGILKIADLGLSRAF--TV 110
Cdd:cd14145    90 GPLNRVLSGKrippdILVNWAVQIARGMNYLHCEAivpVIHRDLKSSNILIlekvengDLSNKILKITDFGLAREWhrTT 169
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 111 PLKAYTheivTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPG 161
Cdd:cd14145   170 KMSAAG----TYAWMAPEVIRSSM-FSKGSDVWSYGVLLWELLTGEVPFRG 215
STKc_TAO2 cd06634
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 2; STKs catalyze ...
52-171 3.23e-10

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 possesses mitogen-activated protein kinase (MAPK) kinase kinase activity and activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating their respective MAP/ERK kinases, MEK3/MEK6 and MKK4/MKK7. It contains a long C-terminal extension with autoinhibitory segments, and is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor, interleukin 1, and Toll-like receptor. The TAO2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270804 [Multi-domain]  Cd Length: 308  Bit Score: 59.27  E-value: 3.23e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGlSRAFTVPLKAYtheIVTLWYRAPEVLL 131
Cdd:cd06634   110 KPLQEVEIAAITHGALQGLAYLHSHNMIHRDVKAGNILL-TEPGLVKLGDFG-SASIMAPANSF---VGTPYWMAPEVIL 184
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 132 G--STHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHI 171
Cdd:cd06634   185 AmdEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226
STKc_MLK3 cd14147
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 3; STKs catalyze the ...
8-161 3.25e-10

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK3 is a mitogen-activated protein kinase kinase kinases (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLK3 activates multiple MAPK pathways and plays a role in apoptosis, proliferation, migration, and differentiation, depending on the cellular context. It is highly expressed in breast cancer cells and its signaling through c-Jun N-terminal kinase has been implicated in the migration, invasion, and malignancy of cancer cells. MLK3 also functions as a negative regulator of Inhibitor of Nuclear Factor-KappaB Kinase (IKK) and consequently, it also impacts inflammation and immunity. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation.The MLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271049 [Multi-domain]  Cd Length: 267  Bit Score: 58.89  E-value: 3.25e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKttGKLVALKKTRLEMDEEDSHRKGS------------NPR----------------------- 52
Cdd:cd14147     9 EVIGIGGFGKVYRGSWR--GELVAVKAARQDPDEDISVTAESvrqearlfamlaHPNiialkavcleepnlclvmeyaag 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 -PLEASLVQR---------FMFQLFKGVAHCHSHG---VLHRDLKPQNLLL-------DKDKGILKIADLGLSRAFTVPL 112
Cdd:cd14147    87 gPLSRALAGRrvpphvlvnWAVQIARGMHYLHCEAlvpVIHRDLKSNNILLlqpiendDMEHKTLKITDFGLAREWHKTT 166
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1063706111 113 KAYTHEivTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPG 161
Cdd:cd14147   167 QMSAAG--TYAWMAPEVIKAST-FSKGSDVWSFGVLLWELLTGEVPYRG 212
PTKc_Wee1_fungi cd14052
Catalytic domain of the Protein Tyrosine Kinases, Fungal Wee1 proteins; PTKs catalyze the ...
59-151 4.08e-10

Catalytic domain of the Protein Tyrosine Kinases, Fungal Wee1 proteins; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of fungal Wee1 proteins, also called Swe1 in budding yeast and Mik1 in fission yeast. Yeast Wee1 is required to control cell size. Wee1 is a cell cycle checkpoint kinase that helps keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of an N-terminal tyr (Y15) residue. During the late G2 phase, CDK1 is activated and mitotic entry is promoted by the removal of this inhibitory phosphorylation by the phosphatase Cdc25. Although Wee1 is functionally a tyr kinase, it is more closely related to serine/threonine kinases (STKs). It contains a catalytic kinase domain sandwiched in between N- and C-terminal regulatory domains. It is regulated by phosphorylation and degradation, and its expression levels are also controlled by circadian clock proteins. The fungal Wee1 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, other PTKs, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270954 [Multi-domain]  Cd Length: 278  Bit Score: 58.59  E-value: 4.08e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLsrAFTVPLKAYTHEIVTLWYRAPEVLLGSThYST 138
Cdd:cd14052   108 VWKILVELSLGLRFIHDHHFVHLDLKPANVLITFE-GTLKIGDFGM--ATVWPLIRGIEREGDREYIAPEILSEHM-YDK 183
                          90
                  ....*....|...
gi 1063706111 139 AVDIWSVGCIFAE 151
Cdd:cd14052   184 PADIFSLGLILLE 196
STKc_IRAK cd14066
Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases ...
10-166 4.78e-10

Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRAKs are involved in Toll-like receptor (TLR) and interleukin-1 (IL-1) signalling pathways, and are thus critical in regulating innate immune responses and inflammation. Some IRAKs may also play roles in T- and B-cell signaling, and adaptive immunity. Vertebrates contain four IRAKs (IRAK-1, -2, -3 (or -M), and -4) that display distinct functions and patterns of expression and subcellular distribution, and can differentially mediate TLR signaling. IRAK-1, -2, and -4 are ubiquitously expressed and are active kinases, while IRAK-M is only induced in monocytes and macrophages and is an inactive kinase. Variations in IRAK genes are linked to diverse diseases including infection, sepsis, cancer, and autoimmune diseases. IRAKs contain an N-terminal Death domain (DD), a proST region (rich in serines, prolines, and threonines), a central kinase domain (a pseudokinase domain in the case of IRAK3), and a C-terminal domain; IRAK-4 lacks the C-terminal domain. This subfamily includes plant receptor-like kinases (RLKs) including Arabidopsis thaliana BAK1 and CLAVATA1 (CLV1). BAK1 functions in BR (brassinosteroid)-regulated plant development and in pathways involved in plant resistance to pathogen infection and herbivore attack. CLV1, directly binds small signaling peptides, CLAVATA3 (CLV3) and CLAVATA3/EMBRYO SURROUNDING REGI0N (CLE), to restrict stem cell proliferation: the CLV3-CLV1-WUS (WUSCHEL) module influences stem cell maintenance in the shoot apical meristem, and the CLE40 (CLAVATA3/EMBRYO SURROUNDING REGION40) -ACR4 (CRINKLY4) -CLV1- WOX5 (WUSCHEL-RELATED HOMEOBOX5) module at the root apical meristem. The IRAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270968 [Multi-domain]  Cd Length: 272  Bit Score: 58.44  E-value: 4.78e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKA-MEktTGKLVALKKTRLEMDEEDS--------------HR---------------------------- 46
Cdd:cd14066     1 IGSGGFGTVYKGvLE--NGTVVAVKRLNEMNCAASKkefltelemlgrlrHPnlvrllgyclesdekllvyeympngsle 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 ------KGSNPRPLEASLvqRFMFQLFKGVAHCHSHG---VLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAY-T 116
Cdd:cd14066    79 drlhchKGSPPLPWPQRL--KIAKGIARGLEYLHEECpppIIHGDIKSSNILLDED-FEPKLTDFGLARLIPPSESVSkT 155
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 117 HEIV-TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMI-RRQALFPGDSEFQ 166
Cdd:cd14066   156 SAVKgTIGYLAPEYIRTGR-VSTKSDVYSFGVVLLELLtGKPAVDENRENAS 206
PTKc_Fes_like cd05041
Catalytic domain of Fes-like Protein Tyrosine Kinases; Protein Tyrosine Kinase (PTK) family; ...
8-151 4.89e-10

Catalytic domain of Fes-like Protein Tyrosine Kinases; Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions.


Pssm-ID: 270637 [Multi-domain]  Cd Length: 251  Bit Score: 58.22  E-value: 4.89e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED-------------------------------------------- 43
Cdd:cd05041     1 EKIGRGNFGDVYRGVLKPDNTEVAVKTCRETLPPDLkrkflqearilkqydhpnivkligvcvqkqpimivmelvpggsl 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 -SHRKGSNPRPLEASLVQrFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSR-----AFTVPLKayTH 117
Cdd:cd05041    81 lTFLRKKGARLTVKQLLQ-MCLDAAAGMEYLESKNCIHRDLAARNCLVG-ENNVLKISDFGMSReeedgEYTVSDG--LK 156
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1063706111 118 EIVTLWyRAPEVLLgSTHYSTAVDIWSVGCIFAE 151
Cdd:cd05041   157 QIPIKW-TAPEALN-YGRYTSESDVWSFGILLWE 188
STKc_MAP3K8 cd13995
Catalytic domain of the Serine/Threonine kinase, Mitogen-Activated Protein Kinase (MAPK) ...
65-238 5.97e-10

Catalytic domain of the Serine/Threonine kinase, Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP3K8 is also called Tumor progression locus 2 (Tpl2) or Cancer Osaka thyroid (Cot), and was first identified as a proto-oncogene in T-cell lymphoma induced by MoMuL virus and in breast carcinoma induced by MMTV. Activated MAP3K8 induces various MAPK pathways including Extracellular Regulated Kinase (ERK) 1/2, c-Jun N-terminal kinase (JNK), and p38. It plays a pivotal role in innate immunity, linking Toll-like receptors to the production of TNF and the activation of ERK in macrophages. It is also required in interleukin-1beta production and is critical in host defense against Gram-positive bacteria. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The MAP3K8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270897 [Multi-domain]  Cd Length: 256  Bit Score: 58.10  E-value: 5.97e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILkiADLGLSRAFT----VPLKAYTHEIvtlwYRAPEVLLGSTHySTAV 140
Cdd:cd13995   104 HVLKGLDFLHSKNIIHHDIKPSNIVFMSTKAVL--VDFGLSVQMTedvyVPKDLRGTEI----YMSPEVILCRGH-NTKA 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 141 DIWSVGcifAEMIRRQALFPgdsefqqllhifrllgtPTEQQWPGVMALRDWHVYPKWEPQdLSRAVPSLSPEGIDLLTQ 220
Cdd:cd13995   177 DIYSLG---ATIIHMQTGSP-----------------PWVRRYPRSAYPSYLYIIHKQAPP-LEDIAQDCSPAMRELLEA 235
                         170
                  ....*....|....*...
gi 1063706111 221 MLKYNPAERISAKAALDH 238
Cdd:cd13995   236 ALERNPNHRSSAAELLKH 253
TOMM_kin_cyc TIGR03903
TOMM system kinase/cyclase fusion protein; This model represents proteins of 1350 in length, ...
53-168 6.50e-10

TOMM system kinase/cyclase fusion protein; This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein. [Cellular processes, Toxin production and resistance]


Pssm-ID: 274846 [Multi-domain]  Cd Length: 1266  Bit Score: 59.09  E-value: 6.50e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDK--DKGILKIADLGLS------RAFTVPLKAYTHEIV-TLW 123
Cdd:TIGR03903   75 ALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQtgVRPHAKVLDFGIGtllpgvRDADVATLTRTTEVLgTPT 154
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 1063706111  124 YRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSE----FQQL 168
Cdd:TIGR03903  155 YCAPEQLRGEP-VTPNSDLYAWGLIFLECLTGQRVVQGASVaeilYQQL 202
STKc_IKK_alpha cd14039
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
10-153 6.52e-10

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IKKalpha is involved in the non-canonical or alternative pathway of regulating Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. The non-canonical pathway functions in cells lacking NEMO (NF-kB Essential MOdulator) and IKKbeta. It is induced by a subset of TNFR family members including CD40, RANK, and B cell-activating factor receptor. IKKalpha processes the Inhibitor of NF-kB (IkB)-like C-terminus of NF-kB2/p100 to produce p52, allowing the p52/RelB dimer to migrate to the nucleus. This pathway is dependent on NIK (NF-kB Inducing Kinase) which phosphorylates and activates IKKalpha. The IKKalpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270941 [Multi-domain]  Cd Length: 289  Bit Score: 58.00  E-value: 6.52e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHR------------------------------------------- 46
Cdd:cd14039     1 LGTGGFGNVCLYQNQETGEKIAIKSCRLELSVKNKDRwcheiqimkklnhpnvvkacdvpeemnflvndvpllameycsg 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 --------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG--ILKIADLGLSRAFTVPlKAYT 116
Cdd:cd14039    81 gdlrkllnKPENCCGLKESQVLSLLSDIGSGIQYLHENKIIHRDLKPENIVLQEINGkiVHKIIDLGYAKDLDQG-SLCT 159
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1063706111 117 HEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd14039   160 SFVGTLQYLAPELFENKS-YTVTVDYWSFGTMVFECI 195
STKc_SPEG_rpt1 cd14108
Catalytic kinase domain, first repeat, of Giant Serine/Threonine Kinase Striated muscle ...
41-171 7.23e-10

Catalytic kinase domain, first repeat, of Giant Serine/Threonine Kinase Striated muscle preferentially expressed protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Striated muscle preferentially expressed gene (SPEG) generates 4 different isoforms through alternative promoter use and splicing in a tissue-specific manner: SPEGalpha and SPEGbeta are expressed in cardiac and skeletal striated muscle; Aortic Preferentially Expressed Protein-1 (APEG-1) is expressed in vascular smooth muscle; and Brain preferentially expressed gene (BPEG) is found in the brain and aorta. SPEG proteins have mutliple immunoglobulin (Ig), 2 fibronectin type III (FN3), and two kinase domains. They are necessary for cardiac development and survival. The SPEG subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271010 [Multi-domain]  Cd Length: 255  Bit Score: 57.60  E-value: 7.23e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  41 EEDSHRKGSNPRPLEaSLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL-DKDKGILKIADLGLSRAFTVPLKAY---- 115
Cdd:cd14108    82 EELLERITKRPTVCE-SEVRSYMRQLLEGIEYLHQNDVLHLDLKPENLLMaDQKTDQVRICDFGNAQELTPNEPQYckyg 160
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 116 THEIVtlwyrAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHI 171
Cdd:cd14108   161 TPEFV-----APEIVNQSP-VSKVTDIWPVGVIAYLCLTGISPFVGENDRTTLMNI 210
PKc_Dusty cd13975
Catalytic domain of the Dual-specificity Protein Kinase, Dusty; Dual-specificity PKs catalyze ...
57-149 7.68e-10

Catalytic domain of the Dual-specificity Protein Kinase, Dusty; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. Dusty protein kinase is also called Receptor-interacting protein kinase 5 (RIPK5 or RIP5) or RIP-homologous kinase. It is widely distributed in the central nervous system, and may be involved in inducing both caspase-dependent and caspase-independent cell death. The Dusty subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270877 [Multi-domain]  Cd Length: 262  Bit Score: 57.50  E-value: 7.68e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  57 SLVQRFMFQL--FKGVAHCHSHGVLHRDLKPQNLLLDK-DKGilKIADLGlsraFTVPLKAYTHEIV-TLWYRAPEVLLG 132
Cdd:cd13975   100 SLEERLQIALdvVEGIRFLHSQGLVHRDIKLKNVLLDKkNRA--KITDLG----FCKPEAMMSGSIVgTPIHMAPELFSG 173
                          90
                  ....*....|....*..
gi 1063706111 133 stHYSTAVDIWSVGCIF 149
Cdd:cd13975   174 --KYDNSVDVYAFGILF 188
STKc_TGFbR_I cd14056
Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type ...
8-155 8.00e-10

Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type I Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of type I receptors for the TGFbeta family of secreted signaling molecules including TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation through trans-phosphorylation by type II receptors, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. They are inhibited by the immunophilin FKBP12, which is thought to control leaky signaling caused by receptor oligomerization in the absence of ligand. The TGFbR-I subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270958 [Multi-domain]  Cd Length: 287  Bit Score: 57.67  E-value: 8.00e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAmeKTTGKLVALKK--TRlemdEEDS----------------------------------------- 44
Cdd:cd14056     1 KTIGKGRYGEVWLG--KYRGEKVAVKIfsSR----DEDSwfreteiyqtvmlrhenilgfiaadikstgswtqlwlitey 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 HRKGS-----NPRPLEASLVQRFMFQLFKGVAHCHS--HG------VLHRDLKPQNLLLDKDkGILKIADLGL-----SR 106
Cdd:cd14056    75 HEHGSlydylQRNTLDTEEALRLAYSAASGLAHLHTeiVGtqgkpaIAHRDLKSKNILVKRD-GTCCIADLGLavrydSD 153
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 107 AFTVPLKAyTHEIVTLWYRAPEVL---LGSTHYST--AVDIWSVGCIFAEMIRR 155
Cdd:cd14056   154 TNTIDIPP-NPRVGTKRYMAPEVLddsINPKSFESfkMADIYSFGLVLWEIARR 206
PKc_LIMK_like cd14065
Catalytic domain of the LIM domain kinase-like protein kinases; PKs catalyze the transfer of ...
10-165 8.42e-10

Catalytic domain of the LIM domain kinase-like protein kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. Members of this subfamily include LIMK, Testicular or testis-specific protein kinase (TESK), and similar proteins. LIMKs are characterized as serine/threonine kinases (STKs) while TESKs are dual-specificity protein kinases. Both LIMK and TESK phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They are implicated in many cellular functions including cell spreading, motility, morphogenesis, meiosis, mitosis, and spermatogenesis. The LIMK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270967 [Multi-domain]  Cd Length: 252  Bit Score: 57.50  E-value: 8.42e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHRKGSNPRPLEASLVQRFMFQLFK--------------------- 68
Cdd:cd14065     1 LGKGFFGEVYKVTHRETGKVMVMKELKRFDEQRSFLKEVKLMRRLSHPNILRFIGVCVKdnklnfiteyvnggtleellk 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 --------------------GVAHCHSHGVLHRDLKPQNLLLDKDKGILK--IADLGLSRAFTV-----PLKAYTHEIV- 120
Cdd:cd14065    81 smdeqlpwsqrvslakdiasGMAYLHSKNIIHRDLNSKNCLVREANRGRNavVADFGLAREMPDektkkPDRKKRLTVVg 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 121 TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRqalFPGDSEF 165
Cdd:cd14065   161 SPYWMAPEMLRGES-YDEKVDVFSFGIVLCEIIGR---VPADPDY 201
STKc_MLK cd14061
Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; STKs catalyze the ...
10-153 1.01e-09

Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Mammals have four MLKs (MLK1-4), mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270963 [Multi-domain]  Cd Length: 258  Bit Score: 57.40  E-value: 1.01e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKttGKLVALKKTRLEMDEEDS-----------------HR-----KG---SNPR-----------P 53
Cdd:cd14061     2 IGVGGFGKVYRGIWR--GEEVAVKAARQDPDEDISvtlenvrqearlfwmlrHPniialRGvclQPPNlclvmeyarggA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQR---------FMFQLFKGVAHCHSHG---VLHRDLKPQNLLLDKDKG-------ILKIADLGLSRAFTVPLKA 114
Cdd:cd14061    80 LNRVLAGRkipphvlvdWAIQIARGMNYLHNEApvpIIHRDLKSSNILILEAIEnedlenkTLKITDFGLAREWHKTTRM 159
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1063706111 115 YTHEivTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd14061   160 SAAG--TYAWMAPEVIKSST-FSKASDVWSYGVLLWELL 195
PTKc_FGFR4 cd05099
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4; PTKs ...
64-227 1.07e-09

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. FGFR4 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR4 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133230 [Multi-domain]  Cd Length: 314  Bit Score: 57.67  E-value: 1.07e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAF--TVPLKAYTHEIVTLWYRAPEVLLGSThYSTAVD 141
Cdd:cd05099   141 YQVARGMEYLESRRCIHRDLAARNVLVTEDN-VMKIADFGLARGVhdIDYYKKTSNGRLPVKWMAPEALFDRV-YTHQSD 218
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 142 IWSVGCIFAEMIRR-QALFPG--DSEFQQLLHIFRLLGTPTEQQWPGVMALRD-WHVYPKWEP------QDLSRAVPSLS 211
Cdd:cd05099   219 VWSFGILMWEIFTLgGSPYPGipVEELFKLLREGHRMDKPSNCTHELYMLMREcWHAVPTQRPtfkqlvEALDKVLAAVS 298
                         170
                  ....*....|....*.
gi 1063706111 212 PEGIDLLTQMLKYNPA 227
Cdd:cd05099   299 EEYLDLSMPFEQYSPS 314
STKc_LRRK1 cd14067
Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 1; STKs catalyze ...
47-204 1.11e-09

Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRK1 is one of two vertebrate LRRKs which show complementary expression in the brain. It can form heterodimers with LRRK2, and may influence the age of onset of LRRK2-associated Parkinson's disease. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. The LRRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270969 [Multi-domain]  Cd Length: 276  Bit Score: 57.28  E-value: 1.11e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLL---LDKDKGI-LKIADLGLSR-AFtvplkaytHEIV- 120
Cdd:cd14067   104 KGSSFMPLGHMLTFKIAYQIAAGLAYLHKKNIIFCDLKSDNILvwsLDVQEHInIKLSDYGISRqSF--------HEGAl 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 ----TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQ---QLLHIFR-LLGTPTEQQWPGVMAL--R 190
Cdd:cd14067   176 gvegTPGYQAPEIRPRIV-YDEKVDMFSYGMVLYELLSGQRPSLGHHQLQiakKLSKGIRpVLGQPEEVQFFRLQALmmE 254
                         170
                  ....*....|....
gi 1063706111 191 DWHVYPKWEPQDLS 204
Cdd:cd14067   255 CWDTKPEKRPLACS 268
STKc_NIK cd13991
Catalytic domain of the Serine/Threonine kinase, NF-kappaB Inducing Kinase (NIK); STKs ...
9-153 1.27e-09

Catalytic domain of the Serine/Threonine kinase, NF-kappaB Inducing Kinase (NIK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NIK, also called mitogen activated protein kinase kinase kinase 14 (MAP3K14), phosphorylates and activates Inhibitor of NF-KappaB Kinase (IKK) alpha, which is a regulator of NF-kB proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. NIK is essential in the IKKalpha-mediated non-canonical NF-kB signaling pathway, in which IKKalpha processes the IkB-like C-terminus of NF-kB2/p100 to produce p52, allowing the p52/RelB dimer to migrate to the nucleus where it regulates gene transcription. NIK also plays an important role in Toll-like receptor 7/9 signaling cascades. The NIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270893 [Multi-domain]  Cd Length: 268  Bit Score: 57.14  E-value: 1.27e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   9 KVGEGTYGKVYKAMEKTTGKLVALKKTRLEM--DEEDSHRKG-SNPRPLE--------------------ASLVQ----- 60
Cdd:cd13991    13 RIGRGSFGEVHRMEDKQTGFQCAVKKVRLEVfrAEELMACAGlTSPRVVPlygavregpwvnifmdlkegGSLGQlikeq 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 ---------RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFT---VPLKAYTHEIV--TLWYRA 126
Cdd:cd13991    93 gclpedralHYLGQALEGLEYLHSRKILHGDVKADNVLLSSDGSDAFLCDFGHAECLDpdgLGKSLFTGDYIpgTETHMA 172
                         170       180
                  ....*....|....*....|....*..
gi 1063706111 127 PEVLLGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd13991   173 PEVVLGKP-CDAKVDVWSSCCMMLHML 198
STKc_MAPKAPK5 cd14171
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
65-240 1.33e-09

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 5 (MAPKAP5 or MK5) is also called PRAK (p38-regulated/activated protein kinase). It contains a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK5 is a ubiquitous protein that is implicated in neuronal morphogenesis, cell migration, and tumor angiogenesis. It interacts with PKA, which induces cytoplasmic translocation of MK5. Its substrates includes p53, ERK3/4, Hsp27, and cytosolic phospholipase A2 (cPLA2). The MAPKAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271073 [Multi-domain]  Cd Length: 289  Bit Score: 57.09  E-value: 1.33e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDK--DKGILKIADLGLSRAFTVPLKAYTHeivTLWYRAPEVLLGSTH------- 135
Cdd:cd14171   117 QIALAVQHCHSLNIAHRDLKPENLLLKDnsEDAPIKLCDFGFAKVDQGDLMTPQF---TPYYVAPQVLEAQRRhrkersg 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 136 ---------YSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGvmalRDWHVypkwepqdlsra 206
Cdd:cd14171   194 iptsptpytYDKSCDMWSLGVIIYIMLCGYPPFYSEHPSRTITKDMKRKIMTGSYEFPE----EEWSQ------------ 257
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1063706111 207 vpsLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14171   258 ---ISEMAKDIVRKLLCVDPEERMTIEEVLHHPW 288
PKc_TESK cd14155
Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; ...
10-155 1.48e-09

Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TESK proteins phosphorylate cofilin and induce actin cytoskeletal reorganization. In the Drosphila eye, TESK is required for epithelial cell organization. Mammals contain two TESK proteins, TESK1 and TESK2, which are highly expressed in testis and play roles in spermatogenesis. TESK1 is found in testicular germ cells while TESK2 is expressed mainly in nongerminal Sertoli cells. TESK1 is stimulated by integrin-mediated signaling pathways. It regulates cell spreading and focal adhesion formation. The TESK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271057 [Multi-domain]  Cd Length: 253  Bit Score: 56.72  E-value: 1.48e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEED-----------SHRK-----------------------GS------ 49
Cdd:cd14155     1 IGSGFFSEVYKVRHRTSGQVMALKMNTLSSNRANmlrevqlmnrlSHPNilrfmgvcvhqgqlhalteyingGNleqlld 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILK--IADLGLsrAFTVPLKAYTHEIVTL----W 123
Cdd:cd14155    81 SNEPLSWTVRVKLALDIARGLSYLHSKGIFHRDLTSKNCLIKRDENGYTavVGDFGL--AEKIPDYSDGKEKLAVvgspY 158
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1063706111 124 YRAPEVLLGSThYSTAVDIWSVGCIFAEMIRR 155
Cdd:cd14155   159 WMAPEVLRGEP-YNEKADVFSYGIILCEIIAR 189
PTKc_Tyk2_rpt2 cd05080
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2; PTKs catalyze ...
57-155 1.78e-09

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Tyk2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270664 [Multi-domain]  Cd Length: 283  Bit Score: 56.83  E-value: 1.78e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  57 SLVQRFMF--QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFTVPLKAY----THEIVTLWYrAPEVl 130
Cdd:cd05080   105 GLAQLLLFaqQICEGMAYLHSQHYIHRDLAARNVLLDNDR-LVKIGDFGLAKAVPEGHEYYrvreDGDSPVFWY-APEC- 181
                          90       100
                  ....*....|....*....|....*
gi 1063706111 131 LGSTHYSTAVDIWSVGCIFAEMIRR 155
Cdd:cd05080   182 LKEYKFYYASDVWSFGVTLYELLTH 206
PHA03211 PHA03211
serine/threonine kinase US3; Provisional
48-173 2.02e-09

serine/threonine kinase US3; Provisional


Pssm-ID: 223009 [Multi-domain]  Cd Length: 461  Bit Score: 57.21  E-value: 2.02e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 GSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGL------SRAFTVPlkaytHEIV- 120
Cdd:PHA03211  251 GARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDIC-LGDFGAacfargSWSTPFH-----YGIAg 324
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 121 TLWYRAPEVLLGSThYSTAVDIWSVG-CIFAEMIRRQALF--PGDSEFQ----QLLHIFR 173
Cdd:PHA03211  325 TVDTNAPEVLAGDP-YTPSVDIWSAGlVIFEAAVHTASLFsaSRGDERRpydaQILRIIR 383
PKc_TOPK cd14001
Catalytic domain of the Dual-specificity protein kinase, Lymphokine-activated killer ...
16-164 2.09e-09

Catalytic domain of the Dual-specificity protein kinase, Lymphokine-activated killer T-cell-originated protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TOPK, also called PDZ-binding kinase (PBK), is activated at the early stage of mitosis and plays a critical role in cytokinesis. It partly functions as a mitogen-activated protein kinase (MAPK) kinase and is capable of phosphorylating p38, JNK1, and ERK2. TOPK also plays a role in DNA damage sensing and repair through its phosphorylation of histone H2AX. It contributes to cancer development and progression by downregulating the function of tumor suppressor p53 and reducing cell-cycle regulatory proteins. TOPK is found highly expressed in breast and skin cancer cells. The TOPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270903 [Multi-domain]  Cd Length: 292  Bit Score: 56.64  E-value: 2.09e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  16 GKVYKAMEKTTGKLVALKKTRLEMDEEdshrkgsnprPLEASLVQRFMFQLFKGVAHCHSHG-VLHRDLKPQNLLLDKDK 94
Cdd:cd14001    79 GSLCLAMEYGGKSLNDLIEERYEAGLG----------PFPAATILKVALSIARALEYLHNEKkILHGDIKSGNVLIKGDF 148
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111  95 GILKIADLG----LSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQA--LFPGDSE 164
Cdd:cd14001   149 ESVKLCDFGvslpLTENLEVDSDPKAQYVGTEPWKAKEALEEGGVITDKADIFAYGLVLWEMMTLSVphLNLLDIE 224
STKc_SGK2 cd05603
Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2; ...
10-153 2.09e-09

Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK2 shows a more restricted distribution than SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. The SGK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270754 [Multi-domain]  Cd Length: 321  Bit Score: 56.90  E-value: 2.09e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALK----KTRLEMDEEDS--------------------HRKGSNPRPLEASL------- 58
Cdd:cd05603     3 IGKGSFGKVLLAKRKCDGKFYAVKvlqkKTILKKKEQNHimaernvllknlkhpflvglHYSFQTSEKLYFVLdyvngge 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 ----VQR-----------FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHEIVTLW 123
Cdd:cd05603    83 lffhLQRercfleprarfYAAEVASAIGYLHSLNIIYRDLKPENILLDC-QGHVVLTDFGLCKEGMEPEETTSTFCGTPE 161
                         170       180       190
                  ....*....|....*....|....*....|
gi 1063706111 124 YRAPEVLLGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd05603   162 YLAPEVLRKEP-YDRTVDWWCLGAVLYEML 190
PTZ00283 PTZ00283
serine/threonine protein kinase; Provisional
41-239 2.24e-09

serine/threonine protein kinase; Provisional


Pssm-ID: 240344 [Multi-domain]  Cd Length: 496  Bit Score: 57.19  E-value: 2.24e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  41 EEDSHRKGSNP-RPLEASLVqrfMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAF--TVPLKAYTH 117
Cdd:PTZ00283  129 EIKSRAKTNRTfREHEAGLL---FIQVLLAVHHVHSKHMIHRDIKSANILLCSN-GLVKLGDFGFSKMYaaTVSDDVGRT 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIVTLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSeFQQLLHifRLLGTpteqqwpgvmalrdwhvypK 197
Cdd:PTZ00283  205 FCGTPYYVAPEIWR-RKPYSKKADMFSLGVLLYELLTLKRPFDGEN-MEEVMH--KTLAG-------------------R 261
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 198 WEPQDlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHP 239
Cdd:PTZ00283  262 YDPLP-----PSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298
PTKc_VEGFR2 cd05103
Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2; ...
33-200 2.54e-09

Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 is a member of the VEGFR subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The VEGFR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270681 [Multi-domain]  Cd Length: 343  Bit Score: 56.53  E-value: 2.54e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  33 KKTRLEMDEEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAF---- 108
Cdd:cd05103   155 EKSLSDVEEEEAGQEDLYKDFLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL-SENNVVKICDFGLARDIykdp 233
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 109 --------TVPLKaytheivtlwYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQAL-FPG---DSEFQQLLHIFRLLG 176
Cdd:cd05103   234 dyvrkgdaRLPLK----------WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASpYPGvkiDEEFCRRLKEGTRMR 302
                         170       180
                  ....*....|....*....|....*
gi 1063706111 177 TPTEQQWPGVMALRD-WHVYPKWEP 200
Cdd:cd05103   303 APDYTTPEMYQTMLDcWHGEPSQRP 327
STKc_ROCK2 cd05621
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
74-163 2.91e-09

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. The ROCK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270771 [Multi-domain]  Cd Length: 379  Bit Score: 56.55  E-value: 2.91e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHEIV-TLWYRAPEVLL---GSTHYSTAVDIWSVGCIF 149
Cdd:cd05621   168 HSMGLIHRDVKPDNMLLDK-YGHLKLADFGTCMKMDETGMVHCDTAVgTPDYISPEVLKsqgGDGYYGRECDWWSVGVFL 246
                          90
                  ....*....|....
gi 1063706111 150 AEMIRRQALFPGDS 163
Cdd:cd05621   247 FEMLVGDTPFYADS 260
PTZ00284 PTZ00284
protein kinase; Provisional
53-240 3.07e-09

protein kinase; Provisional


Pssm-ID: 140307 [Multi-domain]  Cd Length: 467  Bit Score: 56.51  E-value: 3.07e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSH-GVLHRDLKPQNLLLDK---------------DKGILKIADLG------LSRaftv 110
Cdd:PTZ00284  227 PFSHRHLAQIIFQTGVALDYFHTElHLMHTDLKPENILMETsdtvvdpvtnralppDPCRVRICDLGgccderHSR---- 302
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 plkayTHEIVTLWYRAPEVLLG-STHYSTavDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGT-PTEqqWP---G 185
Cdd:PTZ00284  303 -----TAIVSTRHYRSPEVVLGlGWMYST--DMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRlPSE--WAgrcG 373
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 186 VMALRDW-----HVYPKWEPQDLSRAVPSLSPEGI-------DLLTQMLKYNPAERISAKAALDHPY 240
Cdd:PTZ00284  374 TEEARLLynsagQLRPCTDPKHLARIARARPVREVirddllcDLIYGLLHYDRQKRLNARQMTTHPY 440
PTKc_FGFR3 cd05100
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3; PTKs ...
64-227 3.36e-09

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. FGFR3 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173652 [Multi-domain]  Cd Length: 334  Bit Score: 56.18  E-value: 3.36e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAF--TVPLKAYTHEIVTLWYRAPEVLLGSThYSTAVD 141
Cdd:cd05100   141 YQVARGMEYLASQKCIHRDLAARNVLVTEDN-VMKIADFGLARDVhnIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSD 218
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 142 IWSVGCIFAEMIRrqalfPGDSEFQQL--LHIFRLLGTPTEQQWPG------VMALRD-WHVYPKWEP------QDLSRA 206
Cdd:cd05100   219 VWSFGVLLWEIFT-----LGGSPYPGIpvEELFKLLKEGHRMDKPAncthelYMIMREcWHAVPSQRPtfkqlvEDLDRV 293
                         170       180
                  ....*....|....*....|..
gi 1063706111 207 VPSLSP-EGIDLLTQMLKYNPA 227
Cdd:cd05100   294 LTVTSTdEYLDLSVPFEQYSPG 315
STKc_LIMK cd14154
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase; STKs catalyze the transfer ...
10-155 3.62e-09

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. Vertebrate have two members, LIMK1 and LIMK2. The LIMK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271056 [Multi-domain]  Cd Length: 272  Bit Score: 55.98  E-value: 3.62e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTrLEMDEEDSH---RKGSNPRPLEASLVQRFMFQLFK------------------ 68
Cdd:cd14154     1 LGKGFFGQAIKVTHRETGEVMVMKEL-IRFDEEAQRnflKEVKVMRSLDHPNVLKFIGVLYKdkklnliteyipggtlkd 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 -----------------------GVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGLSRAFT---------------- 109
Cdd:cd14154    80 vlkdmarplpwaqrvrfakdiasGMAYLHSMNIIHRDLNSHNCLVREDKTVV-VADFGLARLIVeerlpsgnmspsetlr 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 110 -----VPLKAYTheIV-TLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRR 155
Cdd:cd14154   159 hlkspDRKKRYT--VVgNPYWMAPEMLNGRS-YDEKVDIFSFGIVLCEIIGR 207
STKc_IRAK4 cd14158
Catalytic domain of the Serine/Threonine kinase, Interleukin-1 Receptor Associated Kinase 4; ...
68-171 3.92e-09

Catalytic domain of the Serine/Threonine kinase, Interleukin-1 Receptor Associated Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRAKs are involved in Toll-like receptor (TLR) and interleukin-1 (IL-1) signalling pathways, and are thus critical in regulating innate immune responses and inflammation. IRAKs contain an N-terminal Death domain (DD), a proST region (rich in serines, prolines, and threonines), a central kinase domain, and a C-terminal domain; IRAK-4 lacks the C-terminal domain. Vertebrates contain four IRAKs (IRAK-1, -2, -3 (or -M), and -4) that display distinct functions and patterns of expression and subcellular distribution, and can differentially mediate TLR signaling. IRAK4 plays a critical role in NFkB activation by its interaction with MyD88, which acts as a scaffold that enables IRAK4 to phosphorylate and activate IRAK1 and/or IRAK2. It also plays an important role in type I IFN production induced by TLR7/8/9. The IRAK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271060 [Multi-domain]  Cd Length: 288  Bit Score: 55.97  E-value: 3.92e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  68 KGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAF-TVPLKAYTHEIV-TLWYRAPEVLLGSThySTAVDIWSV 145
Cdd:cd14158   128 NGINYLHENNHIHRDIKSANILLD-ETFVPKISDFGLARASeKFSQTIMTERIVgTTAYMAPEALRGEI--TPKSDIFSF 204
                          90       100
                  ....*....|....*....|....*.
gi 1063706111 146 GCIFAEMIRRQALFPGDSEFQQLLHI 171
Cdd:cd14158   205 GVVLLEIITGLPPVDENRDPQLLLDI 230
STKc_ROCK1 cd05622
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
2-163 4.51e-09

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. The ROCK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270772 [Multi-domain]  Cd Length: 405  Bit Score: 56.17  E-value: 4.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKK-TRLEM----------DEEDSHRKGSNPRPLE---ASLVQRFMFQLF 67
Cdd:cd05622    73 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLlSKFEMikrsdsaffwEERDIMAFANSPWVVQlfyAFQDDRYLYMVM 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  68 K------------------------------GVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTH 117
Cdd:cd05622   153 EympggdlvnlmsnydvpekwarfytaevvlALDAIHSMGFIHRDVKPDNMLLDK-SGHLKLADFGTCMKMNKEGMVRCD 231
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063706111 118 EIV-TLWYRAPEVLL---GSTHYSTAVDIWSVGCIFAEMIRRQALFPGDS 163
Cdd:cd05622   232 TAVgTPDYISPEVLKsqgGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 281
PHA03212 PHA03212
serine/threonine kinase US3; Provisional
66-244 4.82e-09

serine/threonine kinase US3; Provisional


Pssm-ID: 165478 [Multi-domain]  Cd Length: 391  Bit Score: 55.77  E-value: 4.82e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 LFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGlSRAFTVPLKA--YTHEIVTLWYRAPEvLLGSTHYSTAVDIW 143
Cdd:PHA03212  191 VLRAIQYLHENRIIHRDIKAENIFINH-PGDVCLGDFG-AACFPVDINAnkYYGWAGTIATNAPE-LLARDPYGPAVDIW 267
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 144 SVGCIFAEMIRRQ-ALFPG-------DSEfQQLLHIFRLLGT-PTE----------QQWPGVM--ALRDWHVYPKWE--- 199
Cdd:PHA03212  268 SAGIVLFEMATCHdSLFEKdgldgdcDSD-RQIKLIIRRSGThPNEfpidaqanldEIYIGLAkkSSRKPGSRPLWTnly 346
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 200 --PQDLSRavpslspegidLLTQMLKYNPAERISAKAALDHPYFDSL 244
Cdd:PHA03212  347 elPIDLEY-----------LICKMLAFDAHHRPSAEALLDFAAFQDI 382
PTK_Ryk cd05043
Pseudokinase domain of Ryk (Receptor related to tyrosine kinase); Ryk is a receptor tyr kinase ...
44-152 5.79e-09

Pseudokinase domain of Ryk (Receptor related to tyrosine kinase); Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain, which shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. The Ryk subfamily is part of a larger superfamily that includes other pseudokinases and the catalytic domains of active kinases including PTKs, protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270639 [Multi-domain]  Cd Length: 279  Bit Score: 55.15  E-value: 5.79e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 SHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAF------------TVP 111
Cdd:cd05043   103 RLSEANNPQALSTQQLVHMALQIACGMSYLHRRGVIHKDIAARNCVID-DELQVKITDNALSRDLfpmdyhclgdneNRP 181
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 112 LKaytheivtlWYrAPEVLLGStHYSTAVDIWSVGCIFAEM 152
Cdd:cd05043   182 IK---------WM-SLESLVNK-EYSSASDVWSFGVLLWEL 211
STKc_WNK3 cd14031
Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 3; STKs catalyze ...
54-241 5.90e-09

Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNK3 shows a restricted expression pattern; it is found at high levels in the pituary glands and is also expressed in the kidney and brain. It has been shown to regulate many ion transporters including members of the SLC12A family of cation-chloride cotransporters such as NCC and NKCC2, the renal potassium channel ROMK, and the epithelial calcium channels TRPV5 and TRPV6. WNK3 appears to sense low-chloride hypotonic stress and under these conditions, it activates SPAK, which directly interacts and phosphorylates cation-chloride cotransporters. WNK3 has also been shown to promote cell survival, possibly through interaction with procaspase-3 and HSP70. WNKs comprise a subfamily of STKs with an unusual placement of the catalytic lysine relative to all other protein kinases. The WNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270933 [Multi-domain]  Cd Length: 275  Bit Score: 55.11  E-value: 5.90e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHG--VLHRDLKPQNLLLDKDKGILKIADLGLSrafTVPLKAYTHEIV-TLWYRAPEVL 130
Cdd:cd14031   110 MKPKVLRSWCRQILKGLQFLHTRTppIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLMRTSFAKSVIgTPEFMAPEMY 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 131 lgSTHYSTAVDIWSVGCIFAEMIRRQALFpgdSEFQQLLHIFRllgtpteqqwpgvmalrdwHVYPKWEPQDLSRAVpsl 210
Cdd:cd14031   187 --EEHYDESVDVYAFGMCMLEMATSEYPY---SECQNAAQIYR-------------------KVTSGIKPASFNKVT--- 239
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1063706111 211 SPEGIDLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14031   240 DPEVKEIIEGCIRQNKSERLSIKDLLNHAFF 270
PTKc_FGFR1 cd05098
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1; PTKs ...
64-207 6.93e-09

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. FGFR1 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270678 [Multi-domain]  Cd Length: 302  Bit Score: 55.02  E-value: 6.93e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAF--TVPLKAYTHEIVTLWYRAPEVLLGSThYSTAVD 141
Cdd:cd05098   142 YQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIhhIDYYKKTTNGRLPVKWMAPEALFDRI-YTHQSD 219
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 142 IWSVGCIFAEMIRR-QALFPG--DSEFQQLLHIFRLLGTPTEQQWPGVMALRD-WHVYPKWEP------QDLSRAV 207
Cdd:cd05098   220 VWSFGVLLWEIFTLgGSPYPGvpVEELFKLLKEGHRMDKPSNCTNELYMMMRDcWHAVPSQRPtfkqlvEDLDRIV 295
pknD PRK13184
serine/threonine-protein kinase PknD;
1-153 7.16e-09

serine/threonine-protein kinase PknD;


Pssm-ID: 183880 [Multi-domain]  Cd Length: 932  Bit Score: 55.93  E-value: 7.16e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHRK--------------------------------- 47
Cdd:PRK13184    1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKrflreakiaadlihpgivpvysicsdgdpvyyt 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 -------------------GSNPRPL-EASLVQRFMFQLFK---GVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGL 104
Cdd:PRK13184   81 mpyiegytlksllksvwqkESLSKELaEKTSVGAFLSIFHKicaTIEYVHSKGVLHRDLKPDNILLGLFGEVV-ILDWGA 159
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 105 SRA----------------------FTVPLKaytheIV-TLWYRAPEVLLGsTHYSTAVDIWSVGCIFAEMI 153
Cdd:PRK13184  160 AIFkkleeedlldidvdernicyssMTIPGK-----IVgTPDYMAPERLLG-VPASESTDIYALGVILYQML 225
PTKc_Srm_Brk cd05148
Catalytic domain of the Protein Tyrosine Kinases, Src-related kinase lacking C-terminal ...
2-174 7.51e-09

Catalytic domain of the Protein Tyrosine Kinases, Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and Breast tumor kinase (Brk); PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk (also called protein tyrosine kinase 6) are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Brk has been found to be overexpressed in a majority of breast tumors. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. The Srm/Brk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133248 [Multi-domain]  Cd Length: 261  Bit Score: 54.75  E-value: 7.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKlVALK--KTRLEMDEED-----------SH----------------------- 45
Cdd:cd05148     6 EEFTLERKLGSGYFGEVWEGLWKNRVR-VAIKilKSDDLLKQQDfqkevqalkrlRHkhlislfavcsvgepvyiitelm 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 RKGS------NP--RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFTVPL-KAYT 116
Cdd:cd05148    85 EKGSllaflrSPegQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL-VCKVADFGLARLIKEDVyLSSD 163
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 117 HEIVTLWyRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRR-QALFPGDSE---FQQLLHIFRL 174
Cdd:cd05148   164 KKIPYKW-TAPEA-ASHGTFSTKSDVWSFGILLYEMFTYgQVPYPGMNNhevYDQITAGYRM 223
STKc_CaMKI_delta cd14168
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
65-240 8.92e-09

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I delta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271070 [Multi-domain]  Cd Length: 301  Bit Score: 54.67  E-value: 8.92e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLL--DKDKGILKIADLGLSRaFTVPLKAYTHEIVTLWYRAPEVlLGSTHYSTAVDI 142
Cdd:cd14168   116 QVLDAVYYLHRMGIVHRDLKPENLLYfsQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGYVAPEV-LAQKPYSKAVDC 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 143 WSVGCIFAEMIRRQALFPGDSE---FQQLLHifrllgtpTEQQWPGvmalrdwhvyPKWEpqdlsravpSLSPEGIDLLT 219
Cdd:cd14168   194 WSIGVIAYILLCGYPPFYDENDsklFEQILK--------ADYEFDS----------PYWD---------DISDSAKDFIR 246
                         170       180
                  ....*....|....*....|.
gi 1063706111 220 QMLKYNPAERISAKAALDHPY 240
Cdd:cd14168   247 NLMEKDPNKRYTCEQALRHPW 267
STKc_SRPK2 cd14217
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 2; STKs ...
49-241 9.59e-09

Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPK2 mediates neuronal cell cycle and cell death through regulation of nuclear cyclin D1. It has also been found to promote leukemia cell proliferation by regulating cyclin A1. SRPK2 also plays a role in regulating pre-mRNA splicing and is required for spliceosomal B complex formation. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271119 [Multi-domain]  Cd Length: 366  Bit Score: 55.04  E-value: 9.59e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 SNPRPLEASLVQRFMFQLFKGVAHCHSH-GVLHRDLKPQNLLL------------------------------------- 90
Cdd:cd14217   113 SNYQGLPIRCVKSIIRQVLQGLDYLHSKcKIIHTDIKPENILMcvddayvrrmaaeatewqkagapppsgsavstapdll 192
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  91 -------DKDKGILKIADLGlsRAFTVPlKAYTHEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQALFPGDS 163
Cdd:cd14217   193 vnpldprNADKIRVKIADLG--NACWVH-KHFTEDIQTRQYRSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHS 268
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 164 ------EFQQLLHIFRLLGT-PTEQQWPG---------------VMALRDWHVYP------KWEPQDLSRAVpslspegi 215
Cdd:cd14217   269 gedysrDEDHIAHIIELLGCiPRHFALSGkysreffnrrgelrhITKLKPWSLFDvlvekyGWPHEDAAQFT-------- 340
                         250       260
                  ....*....|....*....|....*.
gi 1063706111 216 DLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14217   341 DFLIPMLEMVPEKRASAGECLRHPWL 366
STKc_MLK2 cd14148
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 2; STKs catalyze the ...
10-153 9.61e-09

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK2 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK) and is also called MAP3K10. MAP3Ks phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLK2 is abundant in brain, skeletal muscle, and testis. It functions upstream of the MAPK, c-Jun N-terminal kinase. It binds hippocalcin, a calcium-sensor protein that protects neurons against calcium-induced cell death. Both MLK2 and hippocalcin may be associated with the pathogenesis of Parkinson's disease. MLK2 also binds to normal huntingtin (Htt), which is important in neuronal transcription, development, and survival. MLK2 does not bind to the polyglutamine-expanded Htt, which is implicated in the pathogeneis of Huntington's disease, leading to neuronal toxicity. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 271050 [Multi-domain]  Cd Length: 258  Bit Score: 54.61  E-value: 9.61e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKttGKLVALKKTRLEMDEEDS-----------------HR-----KGSNPRPLEASLVQRFM---- 63
Cdd:cd14148     2 IGVGGFGKVYKGLWR--GEEVAVKAARQDPDEDIAvtaenvrqearlfwmlqHPniialRGVCLNPPHLCLVMEYArgga 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 -------------------FQLFKGVAHCHSHG---VLHRDLKPQNLLL-------DKDKGILKIADLGLSRAF--TVPL 112
Cdd:cd14148    80 lnralagkkvpphvlvnwaVQIARGMNYLHNEAivpIIHRDLKSSNILIlepiendDLSGKTLKITDFGLAREWhkTTKM 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 113 KAYTheivTLWYRAPEVLLGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd14148   160 SAAG----TYAWMAPEVIRLSL-FSKSSDVWSFGVLLWELL 195
STKc_MLK4 cd14146
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 4; STKs catalyze the ...
10-161 1.23e-08

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK4 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The specific function of MLK4 is yet to be determined. Mutations in the kinase domain of MLK4 have been detected in colorectal cancers. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation.The MLK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271048 [Multi-domain]  Cd Length: 268  Bit Score: 54.27  E-value: 1.23e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKttGKLVALKKTRLEMDEE-----DSHRK-----------------------------------GS 49
Cdd:cd14146     2 IGVGGFGKVYRATWK--GQEVAVKAARQDPDEDikataESVRQeaklfsmlrhpniiklegvcleepnlclvmefargGT 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  50 NPRPLEAS---------------LVQRFMFQLFKGVAHCHSHGV---LHRDLKPQNLLL-------DKDKGILKIADLGL 104
Cdd:cd14146    80 LNRALAAAnaapgprrarripphILVNWAVQIARGMLYLHEEAVvpiLHRDLKSSNILLlekiehdDICNKTLKITDFGL 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 105 SRAFTVPLKAYTHEivTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPG 161
Cdd:cd14146   160 AREWHRTTKMSAAG--TYAWMAPEV-IKSSLFSKGSDIWSYGVLLWELLTGEVPYRG 213
STKc_TGFbR1_ACVR1b_ACVR1c cd14143
Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I ...
43-166 1.31e-08

Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I Receptor and Activin Type IB/IC Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TGFbR1, also called Activin receptor-Like Kinase 5 (ALK5), functions as a receptor for TGFbeta and phoshorylates SMAD2/3. TGFbeta proteins are cytokines that regulate cell growth, differentiation, and survival, and are critical in the development and progression of many human cancers. Mutations in TGFbR1 (and TGFbR2) can cause aortic aneurysm disorders such as Loeys-Dietz and Marfan syndromes. ACVR1b (also called ALK4) and ACVR1c (also called ALK7) act as receptors for activin A and B, respectively. TGFbR1, ACVR1b, and ACVR1c belong to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like TGFbR1, ACVR1b, and ACVR1c, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The TGFbR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271045 [Multi-domain]  Cd Length: 288  Bit Score: 54.37  E-value: 1.31e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 DSHRKGS-----NPRPLEASLVQRFMFQLFKGVAHCHSH--------GVLHRDLKPQNLLLdKDKGILKIADLGL----- 104
Cdd:cd14143    73 DYHEHGSlfdylNRYTVTVEGMIKLALSIASGLAHLHMEivgtqgkpAIAHRDLKSKNILV-KKNGTCCIADLGLavrhd 151
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 105 SRAFTVPLkAYTHEIVTLWYRAPEVL---LGSTHYST--AVDIWSVGCIFAEMIRRQALFPGDSEFQ 166
Cdd:cd14143   152 SATDTIDI-APNHRVGTKRYMAPEVLddtINMKHFESfkRADIYALGLVFWEIARRCSIGGIHEDYQ 217
STKc_MAPKAPK2 cd14170
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
55-240 1.32e-08

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 2 (MAPKAP2 or MK2) contains an N-terminal proline-rich region that can bind to SH3 domains, a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK2 is a bonafide substrate for the MAPK p38. It is closely related to MK3 and thus far, MK2/3 show indistinguishable substrate specificity. They are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. The MK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271072 [Multi-domain]  Cd Length: 303  Bit Score: 54.27  E-value: 1.32e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVQRfmfQLFKGVAHCHSHGVLHRDLKPQNLLLDKDK--GILKIADLGLSRAfTVPLKAYTHEIVTLWYRAPEVlLG 132
Cdd:cd14170   102 EASEIMK---SIGEAIQYLHSINIAHRDVKPENLLYTSKRpnAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LG 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 133 STHYSTAVDIWSVGCIFAEMI---------RRQALFPGDSEFQQLlhifrllgtpTEQQWPGvmalrdwhvyPKWEpqdl 203
Cdd:cd14170   177 PEKYDKSCDMWSLGVIMYILLcgyppfysnHGLAISPGMKTRIRM----------GQYEFPN----------PEWS---- 232
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1063706111 204 sravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14170   233 -----EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 264
PKc_MEK2 cd06649
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP) ...
52-164 1.44e-08

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase 2; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MEK2 is a dual-specificity PK and a MAPK kinase (MAPKK or MKK) that phosphorylates and activates the downstream targets, ERK1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132980 [Multi-domain]  Cd Length: 331  Bit Score: 54.28  E-value: 1.44e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRFMFQLFKGVAHC-HSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFtvpLKAYTHEIV-TLWYRAPEV 129
Cdd:cd06649    98 KRIPEEILGKVSIAVLRGLAYLrEKHQIMHRDVKPSNILVNS-RGEIKLCDFGVSGQL---IDSMANSFVgTRSYMSPER 173
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1063706111 130 LLGsTHYSTAVDIWSVGCIFAEM-IRRQALFPGDSE 164
Cdd:cd06649   174 LQG-THYSVQSDIWSMGLSLVELaIGRYPIPPPDAK 208
STKc_NAK_like cd14037
Catalytic domain of Numb-Associated Kinase (NAK)-like Serine/Threonine kinases; STKs catalyze ...
9-147 1.49e-08

Catalytic domain of Numb-Associated Kinase (NAK)-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Drosophila melanogaster NAK, human BMP-2-inducible protein kinase (BMP2K or BIKe) and similar vertebrate proteins, as well as the Saccharomyces cerevisiae proteins Prk1, Actin-regulating kinase 1 (Ark1), and Akl1. NAK was the first characterized member of this subfamily. It plays a role in asymmetric cell division through its association with Numb. It also regulates the localization of Dlg, a protein essential for septate junction formation. BMP2K contains a nuclear localization signal and a kinase domain that is capable of phosphorylating itself and myelin basic protein. The expression of the BMP2K gene is increase during BMP-2-induced osteoblast differentiation. It may function to control the rate of differentiation. Prk1, Ark1, and Akl1 comprise a subfamily of yeast proteins that are important regulators of the actin cytoskeleton and endocytosis. They share an N-terminal kinase domain but no significant homology in other regions of their sequences. The NAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270939 [Multi-domain]  Cd Length: 277  Bit Score: 53.83  E-value: 1.49e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   9 KVGEGTYgKVYKAMEKTTGK-LVALKKTRLemdeedSHRkgsnprpLEASLVQRFMFQLFKGVAHCHSHG--VLHRDLKP 85
Cdd:cd14037    73 RSGNGVY-EVLLLMEYCKGGgVIDLMNQRL------QTG-------LTESEILKIFCDVCEAVAAMHYLKppLIHRDLKV 138
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063706111  86 QNLLLDkDKGILKIADLG-LSRAFTVPLKAY-----THEI---VTLWYRAPEV--LLGSTHYSTAVDIWSVGC 147
Cdd:cd14037   139 ENVLIS-DSGNYKLCDFGsATTKILPPQTKQgvtyvEEDIkkyTTLQYRAPEMidLYRGKPITEKSDIWALGC 210
STKc_Mnk cd14090
Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase ...
55-240 1.79e-08

Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase signal-integrating kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270992 [Multi-domain]  Cd Length: 289  Bit Score: 53.96  E-value: 1.79e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 EASLVQRfmfQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGI--LKIADLGL------SRAFTVPLKayTHEIVT----L 122
Cdd:cd14090   101 EASLVVR---DIASALDFLHDKGIAHRDLKPENILCESMDKVspVKICDFDLgsgiklSSTSMTPVT--TPELLTpvgsA 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 123 WYRAPEVLLG----STHYSTAVDIWSVGCIFAEMIRRQALFPGD---------SEF-----QQLLHIFRllgtPTEQQWP 184
Cdd:cd14090   176 EYMAPEVVDAfvgeALSYDKRCDLWSLGVILYIMLCGYPPFYGRcgedcgwdrGEAcqdcqELLFHSIQ----EGEYEFP 251
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 185 GvmalRDWHvypkwepqdlsravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14090   252 E----KEWS---------------HISAEAKDLISHLLVRDASQRYTAEQVLQHPW 288
STKc_IKK_beta cd14038
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
74-153 1.89e-08

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IKKbeta is involved in the classical pathway of regulating Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. The classical pathway regulates the majority of genes activated by NF-kB including those encoding cytokines, chemokines, leukocyte adhesion molecules, and anti-apoptotic factors. It involves NEMO (NF-kB Essential MOdulator)- and IKKbeta-dependent phosphorylation and degradation of the Inhibitor of NF-kB (IkB), which liberates NF-kB dimers (typified by the p50-p65 heterodimer) from an inactive IkB/dimeric NF-kB complex, enabling them to migrate to the nucleus where they regulate gene transcription. The IKKbeta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270940 [Multi-domain]  Cd Length: 290  Bit Score: 53.81  E-value: 1.89e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDK--DKGILKIADLGLSRAFTVPlKAYTHEIVTLWYRAPEvLLGSTHYSTAVDIWSVGCIFAE 151
Cdd:cd14038   118 HENRIIHRDLKPENIVLQQgeQRLIHKIIDLGYAKELDQG-SLCTSFVGTLQYLAPE-LLEQQKYTVTVDYWSFGTLAFE 195

                  ..
gi 1063706111 152 MI 153
Cdd:cd14038   196 CI 197
STKc_Mnk1 cd14174
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase ...
8-240 2.25e-08

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271076 [Multi-domain]  Cd Length: 289  Bit Score: 53.50  E-value: 2.25e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGKLVALK---------KTRLEMDEEDSHRKGSNPRPLEasLVQRF--------MFQLFKG- 69
Cdd:cd14174     8 ELLGEGAYAKVQGCVSLQNGKEYAVKiieknaghsRSRVFREVETLYQCQGNKNILE--LIEFFeddtrfylVFEKLRGg 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  70 --VAHC-------------------------HSHGVLHRDLKPQNLLLD-KDK-GILKIADLGLSRAFTV-----PLKay 115
Cdd:cd14174    86 siLAHIqkrkhfnereasrvvrdiasaldflHTKGIAHRDLKPENILCEsPDKvSPVKICDFDLGSGVKLnsactPIT-- 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 116 THEIVT----LWYRAPEVLL----GSTHYSTAVDIWSVGCIFAEMIRRQALFPGDS------EFQQLLHIF--RLLGTPT 179
Cdd:cd14174   164 TPELTTpcgsAEYMAPEVVEvftdEATFYDKRCDLWSLGVILYIMLSGYPPFVGHCgtdcgwDRGEVCRVCqnKLFESIQ 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 180 EQQWPgvMALRDWhvypkwepqdlsravPSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14174   244 EGKYE--FPDKDW---------------SHISSEAKDLISKLLVRDAKERLSAAQVLQHPW 287
STKc_Kalirin_C cd14115
C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide ...
59-240 2.27e-08

C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide Exchange Factor, Kalirin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Kalirin, also called Duo or Duet, is a large multidomain protein containing a series of spectrin-like repeats, two each of RhoGEF and SH3 domains, an immunoglobulin-like (Ig) domain and a C-terminal kinase. As a GEF, it activates Rac1, RhoA, and RhoG. It is highly expressed in neurons and is required for spine formation. The kalirin gene produces at least 10 isoforms from alternative promoter use and splicing. Of the major isoforms (Kalirin-7, -9, and -12), only kalirin-12 contains the C-terminal kinase domain. Kalirin-12 is highly expressed during embryonic development and it plays an important role in axon outgrowth. The Kalirin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271017 [Multi-domain]  Cd Length: 248  Bit Score: 53.43  E-value: 2.27e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGI--LKIADLGLSRAFTVPLKAYtHEIVTLWYRAPEVLLGsTHY 136
Cdd:cd14115    91 VAFYIRDIMEALQYLHNCRVAHLDIKPENLLIDLRIPVprVKLIDLEDAVQISGHRHVH-HLLGNPEFAAPEVIQG-TPV 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 137 STAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLlgtpteqqwpgvmalrDWhVYPKWEPQDLSRAVPslspegiD 216
Cdd:cd14115   169 SLATDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRV----------------DF-SFPDEYFGDVSQAAR-------D 224
                         170       180
                  ....*....|....*....|....
gi 1063706111 217 LLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14115   225 FINVILQEDPRRRPTAATCLQHPW 248
STKc_Vps15 cd13980
Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein ...
63-236 2.40e-08

Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein 15; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Vps15 is a large protein consisting of an N-terminal kinase domain, a C-terminal WD-repeat containing domain, and an intermediate bridge domain that contain HEAT repeats. The kinase domain is necessary for the signaling functions of Vps15. Human Vps15 was previously called p150. It associates and regulates Vps34, also called Class III phosphoinositide 3-kinase (PI3K), which catalyzes the phosphorylation of D-myo-phosphatidylinositol (PtdIns). Vps34 is the only PI3K present in yeast. It plays an important role in the regulation of protein and vesicular trafficking and sorting, autophagy, trimeric G-protein signaling, and phagocytosis. The Vps15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and PI3K.


Pssm-ID: 270882 [Multi-domain]  Cd Length: 278  Bit Score: 53.41  E-value: 2.40e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 MFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGLSRAFTVPLK---AYTHEIVT----LWYRAPEVLLGSTH 135
Cdd:cd13980   103 AFQLLHALNQCHKRGVCHGDIKTENVLVTSWNWVY-LTDFASFKPTYLPEDnpaDFSYFFDTsrrrTCYIAPERFVDALT 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 136 YST-----------AVDIWSVGCIFAEM-IRRQALFpgdsEFQQLLhifrllgtpteqqwpgvmALRDWHVYPkwePQDL 203
Cdd:cd13980   182 LDAeserrdgeltpAMDIFSLGCVIAELfTEGRPLF----DLSQLL------------------AYRKGEFSP---EQVL 236
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1063706111 204 SRAVpslsPEGI-DLLTQMLKYNPAERISAKAAL 236
Cdd:cd13980   237 EKIE----DPNIrELILHMIQRDPSKRLSAEDYL 266
STKc_PLK2 cd14188
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2; STKs catalyze the ...
59-241 2.67e-08

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK2, also called Snk (serum-inducible kinase), functions in G1 progression, S-phase arrest, and centriole duplication. Its gene is responsive to both growth factors and cellular stress, is a transcriptional target of p53, and activates a G2-M checkpoint. The PLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271090 [Multi-domain]  Cd Length: 255  Bit Score: 53.09  E-value: 2.67e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGiLKIADLGLSrAFTVPLKAYTHEIV-TLWYRAPEVLLGSTHyS 137
Cdd:cd14188   103 VRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINENME-LKVGDFGLA-ARLEPLEHRRRTICgTPNYLSPEVLNKQGH-G 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 138 TAVDIWSVGCIFAEMIRRQALFpgdsEFQQLLHIFRLLgtpteqqwpgvmalrdwhvypkwepQDLSRAVP-SLSPEGID 216
Cdd:cd14188   180 CESDIWALGCVMYTMLLGRPPF----ETTNLKETYRCI-------------------------REARYSLPsSLLAPAKH 230
                         170       180
                  ....*....|....*....|....*
gi 1063706111 217 LLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14188   231 LIASMLSKNPEDRPSLDEIIRHDFF 255
PTKc_EphR cd05033
Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases; PTKs catalyze the transfer of ...
3-153 3.28e-08

Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor PTKs (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EphB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis.The EphR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270629 [Multi-domain]  Cd Length: 266  Bit Score: 52.76  E-value: 3.28e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKV-GEGTYGKVYKAMEKTTGK---LVALK--------KTRLEMDEEDS-----------HRKGSNPRPLEASLV 59
Cdd:cd05033     4 SYVTIEKViGGGEFGEVCSGSLKLPGKkeiDVAIKtlksgysdKQRLDFLTEASimgqfdhpnviRLEGVVTKSRPVMIV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  60 QRFM------------------FQLF-------KGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFTVPLKA 114
Cdd:cd05033    84 TEYMengsldkflrendgkftvTQLVgmlrgiaSGMKYLSEMNYVHRDLAARNILVNSDL-VCKVSDFGLSRRLEDSEAT 162
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 115 YTH---EIVTLWyRAPEVlLGSTHYSTAVDIWSVGCIFAEMI 153
Cdd:cd05033   163 YTTkggKIPIRW-TAPEA-IAYRKFTSASDVWSFGIVMWEVM 202
PTKc_RET cd05045
Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein; PTKs ...
52-153 3.34e-08

Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor PTK (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma. The RET subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173631 [Multi-domain]  Cd Length: 290  Bit Score: 53.04  E-value: 3.34e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAF---TVPLKAYTHEIVTLWYrAPE 128
Cdd:cd05045   122 RALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGR-KMKISDFGLSRDVyeeDSYVKRSKGRIPVKWM-AIE 199
                          90       100
                  ....*....|....*....|....*
gi 1063706111 129 VLLGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd05045   200 SLFDHI-YTTQSDVWSFGVLLWEIV 223
PTZ00426 PTZ00426
cAMP-dependent protein kinase catalytic subunit; Provisional
72-153 3.36e-08

cAMP-dependent protein kinase catalytic subunit; Provisional


Pssm-ID: 173616 [Multi-domain]  Cd Length: 340  Bit Score: 53.45  E-value: 3.36e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  72 HCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRafTVPLKAYTHeIVTLWYRAPEVLLGSTHySTAVDIWSVGCIFAE 151
Cdd:PTZ00426  146 YLQSLNIVYRDLKPENLLLDKD-GFIKMTDFGFAK--VVDTRTYTL-CGTPEYIAPEILLNVGH-GKAADWWTLGIFIYE 220

                  ..
gi 1063706111 152 MI 153
Cdd:PTZ00426  221 IL 222
STKc_PINK1 cd14018
Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze ...
61-235 3.52e-08

Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PINK1 contains an N-terminal mitochondrial targeting sequence, a catalytic domain, and a C-terminal regulatory region. It plays an important role in maintaining mitochondrial homeostasis. It protects cells against oxidative stress-induced apoptosis by phosphorylating the chaperone TNFR-associated protein 1 (TRAP1), also called Hsp75. Phosphorylated TRAP1 prevents cytochrome c release and peroxide-induced apoptosis. PINK1 interacts with Omi/HtrA2, a serine protease, and Parkin, an E3 ubiquitin ligase, in different pathways to promote mitochondrial health. The parkin gene is the most commonly mutated gene in autosomal recessive familial parkinsonism. Mutations within the catalytic domain of PINK1 are also associated with Parkinson's disease. The PINK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270920 [Multi-domain]  Cd Length: 313  Bit Score: 53.27  E-value: 3.52e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMF-QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKG---ILKIADLGL-----SRAFTVPlkaYTHEIVTLW----YRAP 127
Cdd:cd14018   141 RVMIlQLLEGVDHLVRHGIAHRDLKSDNILLELDFDgcpWLVIADFGCcladdSIGLQLP---FSSWYVDRGgnacLMAP 217
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 128 EVLLGS------THYSTAvDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRllgtptEQQWPGvmalrdwhvypkwepq 201
Cdd:cd14018   218 EVSTAVpgpgvvINYSKA-DAWAVGAIAYEIFGLSNPFYGLGDTMLESRSYQ------ESQLPA---------------- 274
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1063706111 202 dLSRAVPslsPEGIDLLTQMLKYNPAERISAKAA 235
Cdd:cd14018   275 -LPSAVP---PDVRQVVKDLLQRDPNKRVSARVA 304
STKc_cPKC_alpha cd05615
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C alpha; STKs ...
69-169 3.97e-08

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. The cPKC-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270766 [Multi-domain]  Cd Length: 341  Bit Score: 53.08  E-value: 3.97e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLlGSTHYSTAVDIWSVGCI 148
Cdd:cd05615   123 GLFFLHKKGIIYRDLKLDNVMLDSE-GHIKIADFGMCKEHMVEGVTTRTFCGTPDYIAPEII-AYQPYGRSVDWWAYGVL 200
                          90       100
                  ....*....|....*....|....
gi 1063706111 149 FAEMIRRQALFPGDSE---FQQLL 169
Cdd:cd05615   201 LYEMLAGQPPFDGEDEdelFQSIM 224
PTKc_Ack_like cd05040
Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase; PTKs ...
61-152 4.44e-08

Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily includes Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. The Ack-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270636 [Multi-domain]  Cd Length: 258  Bit Score: 52.34  E-value: 4.44e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYT---HEIVTLWYRAPEVlLGSTHYS 137
Cdd:cd05040   102 DYAVQIANGMAYLESKRFIHRDLAARNILLASKDKV-KIGDFGLMRALPQNEDHYVmqeHRKVPFAWCAPES-LKTRKFS 179
                          90
                  ....*....|....*
gi 1063706111 138 TAVDIWSVGCIFAEM 152
Cdd:cd05040   180 HASDVWMFGVTLWEM 194
STKc_LIMK1 cd14221
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1; STKs catalyze the ...
10-155 4.44e-08

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMK1 activation is induced by bone morphogenic protein, vascular endothelial growth factor, and thrombin. It plays roles in microtubule disassembly and cell cycle progression, and is critical in the regulation of neurite outgrowth. LIMK1 knockout mice show abnormalities in dendritic spine morphology and synaptic function. LIMK1 is one of the genes deleted in patients with Williams Syndrome, which is characterized by distinct craniofacial features, cardiovascular problems, as well as behavioral and neurological abnormalities. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. The LIMK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271123 [Multi-domain]  Cd Length: 267  Bit Score: 52.65  E-value: 4.44e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTrLEMDEEDSH---RKGSNPRPLEASLVQRFMFQLFK------------------ 68
Cdd:cd14221     1 LGKGCFGQAIKVTHRETGEVMVMKEL-IRFDEETQRtflKEVKVMRCLEHPNVLKFIGVLYKdkrlnfiteyikggtlrg 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 -----------------------GVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGLSRaFTVPLKAYTHEIVTL--- 122
Cdd:cd14221    80 iiksmdshypwsqrvsfakdiasGMAYLHSMNIIHRDLNSHNCLVRENKSVV-VADFGLAR-LMVDEKTQPEGLRSLkkp 157
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1063706111 123 ------------WYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRR 155
Cdd:cd14221   158 drkkrytvvgnpYWMAPEMINGRS-YDEKVDVFSFGIVLCEIIGR 201
STKc_TTBK cd14017
Catalytic domain of the Serine/Threonine protein kinase, Tau-Tubulin Kinase; STKs catalyze the ...
3-109 5.08e-08

Catalytic domain of the Serine/Threonine protein kinase, Tau-Tubulin Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TTBK is a neuron-specific kinase that phosphorylates the microtubule-associated protein tau and promotes its aggregation. Higher vertebrates contain two TTBK proteins, TTBK1 and TTBK2, both of which have been implicated in neurodegeneration. TTBK1 has been linked to Alzheimer's disease (AD) while TTBK2 is associated with spinocerebellar ataxia type 11 (SCA11). Both AD and SCA11 patients show the presence of neurofibrillary tangles in the brain. The Drosophila TTBK homolog, Asator, is an essential protein that localizes to the mitotic spindle during mitosis and may be involved in regulating microtubule dynamics and function. The TTBK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270919 [Multi-domain]  Cd Length: 263  Bit Score: 52.26  E-value: 5.08e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALK-------KTRLEMD----------------------------------- 40
Cdd:cd14017     1 RWKVVKKIGGGGFGEIYKVRDVVDGEEVAMKvesksqpKQVLKMEvavlkklqgkphfcrligcgrterynyivmtllgp 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063706111  41 EEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLL----DKDKGILkIADLGLSRAFT 109
Cdd:cd14017    81 NLAELRRSQPRGKFSVSTTLRLGIQILKAIEDIHEVGFLHRDVKPSNFAIgrgpSDERTVY-ILDFGLARQYT 152
PTKc_PDGFR_alpha cd05105
Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha; ...
62-212 5.29e-08

Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor PTK (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome and chronic eosinophilic leukemia. The PDGFR alpha subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173653 [Multi-domain]  Cd Length: 400  Bit Score: 52.72  E-value: 5.29e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFT------------VPLKaytheivtlwYRAPEV 129
Cdd:cd05105   242 FTYQVARGMEFLASKNCVHRDLAARNVLLAQGK-IVKICDFGLARDIMhdsnyvskgstfLPVK----------WMAPES 310
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 130 LLGSThYSTAVDIWSVGCIFAEMIRRQA-LFPG---DSEF-QQLLHIFRLLGTPTEQQWPGVMALRDWHVYPKWEPQ--D 202
Cdd:cd05105   311 IFDNL-YTTLSDVWSYGILLWEIFSLGGtPYPGmivDSTFyNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSflH 389
                         170
                  ....*....|
gi 1063706111 203 LSRAVPSLSP 212
Cdd:cd05105   390 LSDIVESLLP 399
PTKc_Tyro3 cd05074
Catalytic domain of the Protein Tyrosine Kinase, Tyro3; PTKs catalyze the transfer of the ...
46-200 6.71e-08

Catalytic domain of the Protein Tyrosine Kinase, Tyro3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Tyro3 is a member of the TAM subfamily, composed of receptor PTKs (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. The Tyro3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270659 [Multi-domain]  Cd Length: 284  Bit Score: 52.23  E-value: 6.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 RKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGLSRaftvplKAYTHEivtlWYR 125
Cdd:cd05074   112 RIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVC-VADFGLSK------KIYSGD----YYR 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 126 ------------APEVLLGSThYSTAVDIWSVGCIFAE-MIRRQALFPG--DSE-FQQLLHIFRLLGTPTEQQWPGVMAL 189
Cdd:cd05074   181 qgcasklpvkwlALESLADNV-YTTHSDVWAFGVTMWEiMTRGQTPYAGveNSEiYNYLIKGNRLKQPPDCLEDVYELMC 259
                         170
                  ....*....|.
gi 1063706111 190 RDWHVYPKWEP 200
Cdd:cd05074   260 QCWSPEPKCRP 270
STKc_SGK3 cd05604
Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced ...
70-245 6.76e-08

Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK3 (also called cytokine-independent survival kinase or CISK) is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. The SGK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270755 [Multi-domain]  Cd Length: 326  Bit Score: 52.27  E-value: 6.76e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  70 VAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIF 149
Cdd:cd05604   110 LGYLHSINIVYRDLKPENILLDS-QGHIVLTDFGLCKEGISNSDTTTTFCGTPEYLAPEVIRKQP-YDNTVDWWCLGSVL 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 150 AEMirrqalfpgdsefqqllhifrLLGTPTeqqwpgvMALRDWH-VYPKWEPQDLSRAvPSLSPEGIDLLTQMLKYNPAE 228
Cdd:cd05604   188 YEM---------------------LYGLPP-------FYCRDTAeMYENILHKPLVLR-PGISLTAWSILEELLEKDRQL 238
                         170       180
                  ....*....|....*....|.
gi 1063706111 229 RISAKAAL----DHPYFDSLD 245
Cdd:cd05604   239 RLGAKEDFleikNHPFFESIN 259
STKc_RPK118_like cd05576
Catalytic domain of the Serine/Threonine Kinase, RPK118, and similar proteins; STKs catalyze ...
58-241 6.80e-08

Catalytic domain of the Serine/Threonine Kinase, RPK118, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RPK118 contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long uncharacterized insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3. RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270728 [Multi-domain]  Cd Length: 265  Bit Score: 52.16  E-value: 6.80e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  58 LVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTvplKAYTHEIVTLWYRAPEVlLGSTHYS 137
Cdd:cd05576   114 CIQRWAAEMVVALDALHREGIVCRDLNPNNILLN-DRGHIQLTYFSRWSEVE---DSCDSDAIENMYCAPEV-GGISEET 188
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 138 TAVDIWSVGCIFAEMIRRQALF---PGDsefqqllhifrlLGTPTEQQWPgvmalrDWhvypkwepqdlsravpsLSPEG 214
Cdd:cd05576   189 EACDWWSLGALLFELLTGKALVechPAG------------INTHTTLNIP------EW-----------------VSEEA 233
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1063706111 215 IDLLTQMLKYNPAERISAKAA-----LDHPYF 241
Cdd:cd05576   234 RSLLQQLLQFNPTERLGAGVAgvediKSHPFF 265
STKc_obscurin_rpt2 cd14110
Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs ...
59-240 7.22e-08

Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Obscurin, approximately 800 kDa in size, is one of three giant proteins expressed in vetebrate striated muscle, together with titin and nebulin. It is a multidomain protein composed of tandem adhesion and signaling domains, including 49 immunoglobulin (Ig) and 2 fibronectin type III (FN3) domains at the N-terminus followed by a more complex region containing more Ig domains, a conserved SH3 domain near a RhoGEF and PH domains, non-modular regions, as well as IQ and phosphorylation motifs. The obscurin gene also encode two kinase domains, which are not expressed as part of the 800 kDa protein, but as a smaller, alternatively spliced product present mainly in the heart muscle, also called obscurin-MLCK. Obscurin is localized at the peripheries of Z-disks and M-lines, where it is able to communicate with the surrounding myoplasm. It interacts with diverse proteins including sAnk1, myosin, titin, and MyBP-C. It may act as a scaffold for the assembly of elements of the contractile apparatus. The obscurin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271012 [Multi-domain]  Cd Length: 257  Bit Score: 51.84  E-value: 7.22e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFT----VPLKAYTHEIVTLwyrAPEVLLGST 134
Cdd:cd14110   101 VTDYLWQILSAVDYLHSRRILHLDLRSENMII-TEKNLLKIVDLGNAQPFNqgkvLMTDKKGDYVETM---APELLEGQG 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 135 hYSTAVDIWSVGCIFAEMIrrQALFPGDSEFqqllhifrllgtpteqQWPGVMALRDWHVypkwepqDLSRAVPSLSPEG 214
Cdd:cd14110   177 -AGPQTDIWAIGVTAFIML--SADYPVSSDL----------------NWERDRNIRKGKV-------QLSRCYAGLSGGA 230
                         170       180
                  ....*....|....*....|....*.
gi 1063706111 215 IDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14110   231 VNFLKSTLCAKPWGRPTASECLQNPW 256
STKc_Mnk2 cd14173
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase ...
54-240 7.77e-08

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271075 [Multi-domain]  Cd Length: 288  Bit Score: 51.95  E-value: 7.77e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRfmfQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGI--LKIADLGLSRAFTV-----PLKayTHEIVT----L 122
Cdd:cd14173   100 LEASVVVQ---DIASALDFLHNKGIAHRDLKPENILCEHPNQVspVKICDFDLGSGIKLnsdcsPIS--TPELLTpcgsA 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 123 WYRAPEVLLG----STHYSTAVDIWSVGCIFAEMIRRQALFPGdsefqqllHIFRLLGTPTEQQWPGVMALRDWHVYP-K 197
Cdd:cd14173   175 EYMAPEVVEAfneeASIYDKRCDLWSLGVILYIMLSGYPPFVG--------RCGSDCGWDRGEACPACQNMLFESIQEgK 246
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 198 WEPQDLSRAvpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14173   247 YEFPEKDWA--HISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 287
PK_STRAD_beta cd08226
Pseudokinase domain of STE20-related kinase adapter protein beta; The pseudokinase domain ...
51-246 7.80e-08

Pseudokinase domain of STE20-related kinase adapter protein beta; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity.STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. STRAD forms a complex with the scaffolding protein MO25, and the serine/threonine kinase (STK), LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270864 [Multi-domain]  Cd Length: 328  Bit Score: 52.18  E-value: 7.80e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  51 PRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIAdlGLSRAFTVPLKAYTHEIV---------T 121
Cdd:cd08226    95 PEGMNEALIGNILYGAIKALNYLHQNGCIHRSVKASHILISGD-GLVSLS--GLSHLYSMVTNGQRSKVVydfpqfstsV 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 122 LWYRAPEVLLGSTH-YSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLH-------------IFRLLGTPTEQQWPGV- 186
Cdd:cd08226   172 LPWLSPELLRQDLHgYNVKSDIYSVGITACELARGQVPFQDMRRTQMLLQklkgppyspldifPFPELESRMKNSQSGMd 251
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 187 -----MALRDWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSLDK 246
Cdd:cd08226   252 sgigeSVATSSMTRTMTSERLQTPSSKTFSPAFHNLVELCLQQDPEKRPSASSLLSHSFFKQVKE 316
STKc_LIMK2 cd14222
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 2; STKs catalyze the ...
10-153 8.08e-08

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMK2 activation is induced by transforming growth factor-beta l (TGFb-l) and shares the same subcellular location as the cofilin family member twinfilin, which may be its biological substrate. LIMK2 plays a role in spermatogenesis, and may contribute to tumor progression and metastasis formation in some cancer cells. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. The LIMK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271124 [Multi-domain]  Cd Length: 272  Bit Score: 51.87  E-value: 8.08e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTrLEMDEEDSH---RKGSNPRPLEASLVQRFMFQLFK------------------ 68
Cdd:cd14222     1 LGKGFFGQAIKVTHKATGKVMVMKEL-IRCDEETQKtflTEVKVMRSLDHPNVLKFIGVLYKdkrlnlltefieggtlkd 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 ----------------------GVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGLSRAFT-----VPLKAYTHEIVT 121
Cdd:cd14222    80 flraddpfpwqqkvsfakgiasGMAYLHSMSIIHRDLNSHNCLIKLDKTVV-VADFGLSRLIVeekkkPPPDKPTTKKRT 158
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 122 L---------------WYRAPEVLLGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd14222   159 LrkndrkkrytvvgnpYWMAPEMLNGKS-YDEKVDIFSFGIVLCEII 204
STKc_Raf cd14062
Catalytic domain of the Serine/Threonine Kinases, Raf (Rapidly Accelerated Fibrosarcoma) ...
65-169 8.18e-08

Catalytic domain of the Serine/Threonine Kinases, Raf (Rapidly Accelerated Fibrosarcoma) kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Raf kinases act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. They function in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. Aberrant expression or activation of components in this pathway are associated with tumor initiation, progression, and metastasis. Raf proteins contain a Ras binding domain, a zinc finger cysteine-rich domain, and a catalytic kinase domain. Vertebrates have three Raf isoforms (A-, B-, and C-Raf) with different expression profiles, modes of regulation, and abilities to function in the ERK cascade, depending on cellular context and stimuli. They have essential and non-overlapping roles during embryo- and organogenesis. Knockout of each isoform results in a lethal phenotype or abnormality in most mouse strains. The Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270964 [Multi-domain]  Cd Length: 253  Bit Score: 51.63  E-value: 8.18e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFT-----VPLKAYTHEIvtLWYrAPEV--LLGSTHYS 137
Cdd:cd14062    97 QTAQGMDYLHAKNIIHRDLKSNNIFLHED-LTVKIGDFGLATVKTrwsgsQQFEQPTGSI--LWM-APEVirMQDENPYS 172
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1063706111 138 TAVDIWSVGCIFAEMIRRQALFPGDSEFQQLL 169
Cdd:cd14062   173 FQSDVYAFGIVLYELLTGQLPYSHINNRDQIL 204
STKc_TLK2 cd14041
Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 2; STKs catalyze the ...
78-241 8.85e-08

Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TLKs play important functions during the cell cycle and are implicated in chromatin remodeling, DNA replication and repair, and mitosis. They phosphorylate and regulate Anti-silencing function 1 protein (Asf1), a histone H3/H4 chaperone that helps facilitate the assembly of chromatin following DNA replication during S phase. TLKs also phosphorylate the H3 histone tail and are essential in transcription. Vertebrates contain two subfamily members, TLK1 and TLK2. The TLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270943 [Multi-domain]  Cd Length: 309  Bit Score: 51.98  E-value: 8.85e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  78 VLHRDLKPQNLLLDKDK--GILKIADLGLSRAF-------TVPLKAYTHEIVTLWYRAPEVLLGSTH---YSTAVDIWSV 145
Cdd:cd14041   134 IIHYDLKPGNILLVNGTacGEIKITDFGLSKIMdddsynsVDGMELTSQGAGTYWYLPPECFVVGKEppkISNKVDVWSV 213
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 146 GCIFAEMIRRQALFPGDSEFQQLLHIFRLLgTPTEQQWPgvmalrdwhvyPKwepqdlsravPSLSPEGIDLLTQMLKYN 225
Cdd:cd14041   214 GVIFYQCLYGRKPFGHNQSQQDILQENTIL-KATEVQFP-----------PK----------PVVTPEAKAFIRRCLAYR 271
                         170
                  ....*....|....*.
gi 1063706111 226 PAERISAKAALDHPYF 241
Cdd:cd14041   272 KEDRIDVQQLACDPYL 287
STKc_DAPK1 cd14194
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 1; STKs ...
2-240 1.01e-07

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK1 is the prototypical member of the subfamily and is also simply referred to as DAPK. It is Ca2+/calmodulin (CaM)-regulated and actin-associated protein that contains an N-terminal kinase domain followed by an autoinhibitory CaM binding region and a large C-terminal extension with multiple functional domains including ankyrin (ANK) repeats, a cytoskeletal binding domain, a Death domain, and a serine-rich tail. Loss of DAPK1 expression, usually because of DNA methylation, is implicated in many tumor types. DAPK1 is highly abundant in the brain and has also been associated with neurodegeneration. The DAPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271096 [Multi-domain]  Cd Length: 269  Bit Score: 51.56  E-value: 1.01e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK--------KTRLEMDEEDSHRKGS------NPRPL------------- 54
Cdd:cd14194     5 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKfikkrrtkSSRRGVSREDIEREVSilkeiqHPNVItlhevyenktdvi 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  55 -----------------EASLVQR----FMFQLFKGVAHCHSHGVLHRDLKPQN-LLLDKD--KGILKIADLGLSRAFTV 110
Cdd:cd14194    85 lilelvaggelfdflaeKESLTEEeateFLKQILNGVYYLHSLQIAHFDLKPENiMLLDRNvpKPRIKIIDFGLAHKIDF 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 111 PlKAYTHEIVTLWYRAPEVL----LGsthysTAVDIWSVGCIfaemirRQALFPGDSEFqqllhifrlLGTPTEQQWPGV 186
Cdd:cd14194   165 G-NEFKNIFGTPEFVAPEIVnyepLG-----LEADMWSIGVI------TYILLSGASPF---------LGDTKQETLANV 223
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 187 MAlrdwhVYPKWEPQDLSravpSLSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14194   224 SA-----VNYEFEDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 268
STKc_DAPK2 cd14196
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 2; STKs ...
61-171 1.02e-07

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK2, also called DAPK-related protein 1 (DRP-1), is a Ca2+/calmodulin (CaM)-regulated protein containing an N-terminal kinase domain, a CaM autoinhibitory site and a dimerization module. It lacks the cytoskeletal binding regions of DAPK1 and the exogenous protein has been shown to be soluble and cytoplasmic. FLAG-tagged DAPK2, however, accumulated within membrane-enclosed autophagic vesicles. It is unclear where endogenous DAPK2 is localized. DAPK2 participates in TNF-alpha and FAS-receptor induced cell death and enhances neutrophilic maturation in myeloid leukemic cells. It contributes to the induction of anoikis and its down-regulation is implicated in the beta-catenin induced resistance of malignant epithelial cells to anoikis. The DAPK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271098 [Multi-domain]  Cd Length: 269  Bit Score: 51.50  E-value: 1.02e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMFQLFKGVAHCHSHGVLHRDLKPQN-LLLDKDKGI--LKIADLGLSRAFT--VPLKAY--THEIVtlwyrAPEVL--- 130
Cdd:cd14196   112 SFIKQILDGVNYLHTKKIAHFDLKPENiMLLDKNIPIphIKLIDFGLAHEIEdgVEFKNIfgTPEFV-----APEIVnye 186
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 131 -LGsthysTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHI 171
Cdd:cd14196   187 pLG-----LEADMWSIGVITYILLSGASPFLGDTKQETLANI 223
PTKc_VEGFR cd05054
Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; ...
33-200 1.10e-07

Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. VEGFR subfamily members are receptor PTKss (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. The VEGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270647 [Multi-domain]  Cd Length: 298  Bit Score: 51.72  E-value: 1.10e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  33 KKTRLEMDEEDSHRKGSNPRPLEASLVqrFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAF---- 108
Cdd:cd05054   116 KGARDVEEEEDDDELYKEPLTLEDLIC--YSFQVARGMEFLASRKCIHRDLAARNILL-SENNVVKICDFGLARDIykdp 192
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 109 --------TVPLKaytheivtlwYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRQAL-FPG---DSEFQQLLHIFRLLG 176
Cdd:cd05054   193 dyvrkgdaRLPLK----------WMAPESIFDKV-YTTQSDVWSFGVLLWEIFSLGASpYPGvqmDEEFCRRLKEGTRMR 261
                         170       180
                  ....*....|....*....|....*.
gi 1063706111 177 TPtEQQWPGV--MALRDWHVYPKWEP 200
Cdd:cd05054   262 AP-EYTTPEIyqIMLDCWHGEPKERP 286
PTKc_Jak2_rpt2 cd14205
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 2; PTKs catalyze the ...
7-152 1.11e-07

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 is widely expressed in many tissues and is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271107 [Multi-domain]  Cd Length: 284  Bit Score: 51.55  E-value: 1.11e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   7 LEKVGEGTYGKV----YKAMEKTTGKLVALKKTRLEMDE--EDSHRK--------------------------------- 47
Cdd:cd14205     9 LQQLGKGNFGSVemcrYDPLQDNTGEVVAVKKLQHSTEEhlRDFEREieilkslqhdnivkykgvcysagrrnlrlimey 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 ---GS-------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYT- 116
Cdd:cd14205    89 lpyGSlrdylqkHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEYYKv 167
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1063706111 117 ---HEIVTLWYrAPEVLLGSThYSTAVDIWSVGCIFAEM 152
Cdd:cd14205   168 kepGESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 204
STKc_aPKC_zeta cd05617
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta; STKs catalyze ...
74-159 1.27e-07

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. The aPKC-zeta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270768 [Multi-domain]  Cd Length: 357  Bit Score: 51.56  E-value: 1.27e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGStHYSTAVDIWSVGCIFAEMI 153
Cdd:cd05617   133 HERGIIYRDLKLDNVLLDAD-GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE-EYGFSVDWWALGVLMFEMM 210

                  ....*.
gi 1063706111 154 RRQALF 159
Cdd:cd05617   211 AGRSPF 216
PTKc_FGFR2 cd05101
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2; PTKs ...
64-205 1.38e-07

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. FGFR2 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270679 [Multi-domain]  Cd Length: 313  Bit Score: 51.55  E-value: 1.38e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFTVP--LKAYTHEIVTLWYRAPEVLLGSThYSTAVD 141
Cdd:cd05101   153 YQLARGMEYLASQKCIHRDLAARNVLVTENN-VMKIADFGLARDINNIdyYKKTTNGRLPVKWMAPEALFDRV-YTHQSD 230
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 142 IWSVGCIFAEMIRR-QALFPGD--SEFQQLLHIFRLLGTPTEQQWPGVMALRD-WHVYPKWEP------QDLSR 205
Cdd:cd05101   231 VWSFGVLMWEIFTLgGSPYPGIpvEELFKLLKEGHRMDKPANCTNELYMMMRDcWHAVPSQRPtfkqlvEDLDR 304
STKc_MASTL cd05610
Catalytic domain of the Serine/Threonine Kinase, Microtubule-associated serine/threonine-like ...
74-245 1.63e-07

Catalytic domain of the Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase (also called greatwall kinase); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. MASTL, also called greatwall kinase (Gwl), is involved in the regulation of mitotic entry, which is controlled by the coordinated activities of protein kinases and opposing protein phosphatases (PPs). The cyclin B/CDK1 complex induces entry into M-phase while PP2A-B55 shows anti-mitotic activity. MASTL/Gwl is activated downstream of cyclin B/CDK1 and indirectly inhibits PP2A-B55 by phosphorylating the small protein alpha-endosulfine (Ensa) or the cAMP-regulated phosphoprotein 19 (Arpp19), resulting in M-phase progression. Gwl kinase may also play roles in mRNA stabilization and DNA checkpoint recovery. The human MASTL gene has also been named FLJ14813; a missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. The MASTL kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270761 [Multi-domain]  Cd Length: 349  Bit Score: 51.42  E-value: 1.63e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLdKDKGILKIADLGLSR---------------------------------------AFTVPLKA 114
Cdd:cd05610   121 HRHGIIHRDLKPDNMLI-SNEGHIKLTDFGLSKvtlnrelnmmdilttpsmakpkndysrtpgqvlslisslGFNTPTPY 199
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 115 YTHEIV--------------TLWYRAPEVLLGSTHySTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRllgtpTE 180
Cdd:cd05610   200 RTPKSVrrgaarvegerilgTPDYLAPELLLGKPH-GPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILN-----RD 273
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 181 QQWPgvmalrdwhvypkwepqDLSRAVPSLSPEGIDLLtqmLKYNPAERISAKAALDHPYFDSLD 245
Cdd:cd05610   274 IPWP-----------------EGEEELSVNAQNAIEIL---LTMDPTKRAGLKELKQHPLFHGVD 318
PTKc_Btk_Bmx cd05113
Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow ...
68-152 1.64e-07

Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor, leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. The Btk/Bmx subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173657 [Multi-domain]  Cd Length: 256  Bit Score: 50.65  E-value: 1.64e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  68 KGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRafTVPLKAYTHEIVTLW---YRAPEVLLGSThYSTAVDIWS 144
Cdd:cd05113   111 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR--YVLDDEYTSSVGSKFpvrWSPPEVLMYSK-FSSKSDVWA 186

                  ....*...
gi 1063706111 145 VGCIFAEM 152
Cdd:cd05113   187 FGVLMWEV 194
STKc_aPKC_iota cd05618
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C iota; STKs catalyze ...
72-159 1.85e-07

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C iota; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270769 [Multi-domain]  Cd Length: 364  Bit Score: 51.19  E-value: 1.85e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  72 HCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSThYSTAVDIWSVGCIFAE 151
Cdd:cd05618   136 YLHERGIIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFE 213

                  ....*...
gi 1063706111 152 MIRRQALF 159
Cdd:cd05618   214 MMAGRSPF 221
PTKc_FGFR cd05053
Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors; PTKs ...
47-186 1.92e-07

Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. The FGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase .


Pssm-ID: 270646 [Multi-domain]  Cd Length: 294  Bit Score: 50.88  E-value: 1.92e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  47 KGSNPRPLEASLVQR----FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFtvplkaytHEIVtl 122
Cdd:cd05053   119 SPDDPRVPEEQLTQKdlvsFAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDI--------HHID-- 187
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 123 WYR------------APEVLLgSTHYSTAVDIWSVGCIFAEmirrqalfpgdsefqqllhIFRLLGTPteqqWPGV 186
Cdd:cd05053   188 YYRkttngrlpvkwmAPEALF-DRVYTHQSDVWSFGVLLWE-------------------IFTLGGSP----YPGI 239
STKc_BMPR1 cd14144
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type I Receptor; ...
54-155 1.95e-07

Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type I Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1 functions as a receptor for morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Vertebrates contain two type I BMP receptors, BMPR1a and BMPR1b. BMPR1 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that also includes TGFbeta, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271046 [Multi-domain]  Cd Length: 287  Bit Score: 50.94  E-value: 1.95e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSH--------GVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLK----AYTHEIVT 121
Cdd:cd14144    89 LDTQSMLKLAYSAACGLAHLHTEifgtqgkpAIAHRDIKSKNILVKKN-GTCCIADLGLAVKFISETNevdlPPNTRVGT 167
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1063706111 122 LWYRAPEVL---LGSTHYST--AVDIWSVGCIFAEMIRR 155
Cdd:cd14144   168 KRYMAPEVLdesLNRNHFDAykMADMYSFGLVLWEIARR 206
STKc_SGK1 cd05602
Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced ...
65-153 2.22e-07

Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. The SGK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270753 [Multi-domain]  Cd Length: 339  Bit Score: 50.79  E-value: 2.22e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVlLGSTHYSTAVDIWS 144
Cdd:cd05602   116 EIASALGYLHSLNIVYRDLKPENILLDS-QGHIVLTDFGLCKENIEPNGTTSTFCGTPEYLAPEV-LHKQPYDRTVDWWC 193

                  ....*....
gi 1063706111 145 VGCIFAEMI 153
Cdd:cd05602   194 LGAVLYEML 202
STKc_ACVR2 cd14053
Catalytic domain of the Serine/Threonine Kinase, Activin Type II Receptor; STKs catalyze the ...
45-155 2.25e-07

Catalytic domain of the Serine/Threonine Kinase, Activin Type II Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors, such as ACVR2, are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. Vertebrates contain two ACVR2 proteins, ACVR2a (or ActRIIA) and ACVR2b (or ActRIIB). The ACVR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270955 [Multi-domain]  Cd Length: 290  Bit Score: 50.40  E-value: 2.25e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 HRKGSNPRPLEASLVQ-----RFMFQLFKGVAHCHS----------HGVLHRDLKPQNLLLDKDKGILkIADLGLSRAF- 108
Cdd:cd14053    75 HERGSLCDYLKGNVISwnelcKIAESMARGLAYLHEdipatngghkPSIAHRDFKSKNVLLKSDLTAC-IADFGLALKFe 153
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 109 TVPLKAYTHEIV-TLWYRAPEVLLGSTHYST----AVDIWSVGCIFAEMIRR 155
Cdd:cd14053   154 PGKSCGDTHGQVgTRRYMAPEVLEGAINFTRdaflRIDMYAMGLVLWELLSR 205
STKc_CaMK_like cd14088
Catalytic domain of an Uncharacterized group of Serine/Threonine kinases with similarity to ...
65-240 2.76e-07

Catalytic domain of an Uncharacterized group of Serine/Threonine kinases with similarity to Calcium/calmodulin-dependent protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of uncharacterized STKs with similarity to CaMKs, which are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). CaMKs contain an N-terminal catalytic domain followed by a regulatory domain that harbors a CaM binding site. This uncharacterized subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270990 [Multi-domain]  Cd Length: 265  Bit Score: 50.41  E-value: 2.76e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLD---KDKGILkIADLGLSRAFTVPLKaytHEIVTLWYRAPEVlLGSTHYSTAVD 141
Cdd:cd14088   107 QVLEAVAYLHSLKIVHRNLKLENLVYYnrlKNSKIV-ISDFHLAKLENGLIK---EPCGTPEYLAPEV-VGRQRYGRPVD 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 142 IWSVGCIFAEMIRRQALFPGDSE-----------FQQLLHifrllgtpteqqwpgvmalRDWHV-YPKWEpqdlsravpS 209
Cdd:cd14088   182 CWAIGVIMYILLSGNPPFYDEAEeddyenhdknlFRKILA-------------------GDYEFdSPYWD---------D 233
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1063706111 210 LSPEGIDLLTQMLKYNPAERISAKAALDHPY 240
Cdd:cd14088   234 ISQAAKDLVTRLMEVEQDQRITAEEAISHEW 264
PTKc_VEGFR3 cd05102
Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3; ...
62-200 2.90e-07

Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. VEGFR3 is a member of the VEGFR subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The VEGFR3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270680 [Multi-domain]  Cd Length: 336  Bit Score: 50.36  E-value: 2.90e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSR------------AFTVPLKaytheivtlwYRAPEV 129
Cdd:cd05102   177 YSFQVARGMEFLASRKCIHRDLAARNILLSENN-VVKICDFGLARdiykdpdyvrkgSARLPLK----------WMAPES 245
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 130 LLGSThYSTAVDIWSVGCIFAEMIRRQAL-FPG---DSEFQQLLHIFRLLGTP--TEQQWPGVMaLRDWHVYPKWEP 200
Cdd:cd05102   246 IFDKV-YTTQSDVWSFGVLLWEIFSLGASpYPGvqiNEEFCQRLKDGTRMRAPeyATPEIYRIM-LSCWHGDPKERP 320
PTKc_Ror2 cd05091
Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor ...
65-201 3.11e-07

Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. The Ror2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270673 [Multi-domain]  Cd Length: 284  Bit Score: 50.02  E-value: 3.11e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVP--LKAYTHEIVTLWYRAPEVLLGSThYSTAVDI 142
Cdd:cd05091   133 QIAAGMEYLSSHHVVHKDLATRNVLV-FDKLNVKISDLGLFREVYAAdyYKLMGNSLLPIRWMSPEAIMYGK-FSIDSDI 210
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 143 WSVGCIFAEmIRRQALFP--GDSEfQQLLHIFR---LLGTPTE-QQWPGVMALRDWHVYPKWEPQ 201
Cdd:cd05091   211 WSYGVVLWE-VFSYGLQPycGYSN-QDVIEMIRnrqVLPCPDDcPAWVYTLMLECWNEFPSRRPR 273
PTKc_Frk_like cd05068
Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
65-153 3.33e-07

Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Frk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270653 [Multi-domain]  Cd Length: 267  Bit Score: 50.10  E-value: 3.33e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYTHEIVTL---WyRAPEVLLgSTHYSTAVD 141
Cdd:cd05068   112 QVASGMAYLESQNYIHRDLAARNVLVG-ENNICKVADFGLARVIKVEDEYEAREGAKFpikW-TAPEAAN-YNRFSIKSD 188
                          90
                  ....*....|..
gi 1063706111 142 IWSVGCIFAEMI 153
Cdd:cd05068   189 VWSFGILLTEIV 200
PTKc_Axl cd05075
Catalytic domain of the Protein Tyrosine Kinase, Axl; PTKs catalyze the transfer of the ...
46-210 4.02e-07

Catalytic domain of the Protein Tyrosine Kinase, Axl; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. It is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. It is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Axl is a member of the TAM subfamily, composed of receptor PTKs (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to its ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. The Axl subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270660 [Multi-domain]  Cd Length: 277  Bit Score: 49.62  E-value: 4.02e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 RKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGLSRaftvplKAYTHEivtlWYR 125
Cdd:cd05075   102 RLGDCPVYLPTQMLVKFMTDIASGMEYLSSKNFIHRDLAARNCMLNENMNVC-VADFGLSK------KIYNGD----YYR 170
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 126 APEVL-----------LGSTHYSTAVDIWSVGCIFAEMIRR-QALFPG--DSEFQQLLHIFRLLGTPTEqQWPGVMAL-- 189
Cdd:cd05075   171 QGRISkmpvkwiaiesLADRVYTTKSDVWSFGVTMWEIATRgQTPYPGveNSEIYDYLRQGNRLKQPPD-CLDGLYELms 249
                         170       180
                  ....*....|....*....|....*..
gi 1063706111 190 RDWHVYPKWEP------QDLSRAVPSL 210
Cdd:cd05075   250 SCWLLNPKDRPsfetlrCELEKILKDL 276
PK_TRB1 cd14023
Pseudokinase domain of Tribbles Homolog 1; The pseudokinase domain shows similarity to protein ...
17-241 5.37e-07

Pseudokinase domain of Tribbles Homolog 1; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. TRB1 interacts directly with the mitogen activated protein kinase (MAPK) kinase MKK4, an activator of JNK. It regulates vascular smooth muscle cell proliferation and chemotaxis through the JNK signaling pathway. It is found to be down-regulated in human acute myeloid leukaemia (AML) and may play a role in the pathogenesis of the disease. It has also been identified as a potential biomarker for antibody-mediated allograft failure. TRB1 is one of three Tribbles Homolog (TRB) proteins present in vertebrates that are encoded by three separate genes. TRB proteins interact with many proteins involved in signalling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, and gene expression. The TRB1 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270925 [Multi-domain]  Cd Length: 242  Bit Score: 49.28  E-value: 5.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  17 KVYKAMEKTTGKLVALKKTRLEMDEEDShrkgsnprpleaslvQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLD----- 91
Cdd:cd14023    59 KAYVFFEKDFGDMHSYVRSCKRLREEEA---------------ARLFKQIVSAVAHCHQSAIVLGDLKLRKFVFSdeert 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  92 -------KDKGILKIADLGLSRAFTVPLkaytheivtlwYRAPEVLLGSTHYS-TAVDIWSVGCIFAEMIRRQALFpGDS 163
Cdd:cd14023   124 qlrleslEDTHIMKGEDDALSDKHGCPA-----------YVSPEILNTTGTYSgKSADVWSLGVMLYTLLVGRYPF-HDS 191
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063706111 164 EFQQLLHIFRllgtpteqqwPGVMALRDwHVYPKwepqdlSRAvpslspegidLLTQMLKYNPAERISAKAALDHPYF 241
Cdd:cd14023   192 DPSALFSKIR----------RGQFCIPD-HVSPK------ARC----------LIRSLLRREPSERLTAPEILLHPWF 242
PTKc_Tec_like cd05059
Catalytic domain of Tec-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
65-152 5.87e-07

Catalytic domain of Tec-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Tec-like subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. They are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nonreceptor PTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. Tec kinases play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). The Tec-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173637 [Multi-domain]  Cd Length: 256  Bit Score: 48.98  E-value: 5.87e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRafTVPLKAYTHEIVTLW---YRAPEVLLgSTHYSTAVD 141
Cdd:cd05059   108 DVCEAMEYLESNGFIHRDLAARNCLVG-EQNVVKVSDFGLAR--YVLDDEYTSSVGTKFpvkWSPPEVFM-YSKFSSKSD 183
                          90
                  ....*....|.
gi 1063706111 142 IWSVGCIFAEM 152
Cdd:cd05059   184 VWSFGVLMWEV 194
PK_GC cd13992
Pseudokinase domain of membrane Guanylate Cyclase receptors; The pseudokinase domain shows ...
62-233 6.75e-07

Pseudokinase domain of membrane Guanylate Cyclase receptors; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs lack a critical aspartate involved in ATP binding and does not exhibit kinase activity. It functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270894 [Multi-domain]  Cd Length: 268  Bit Score: 48.93  E-value: 6.75e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCH-SHGVLHRDLKPQNLLLDkDKGILKIADLGLS---RAFTVPLKAYTHEIVTLWYRAPEVL---LGST 134
Cdd:cd13992   102 FIKDIVKGMNYLHsSSIGYHGRLKSSNCLVD-SRWVVKLTDFGLRnllEEQTNHQLDEDAQHKKLLWTAPELLrgsLLEV 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 135 HYSTAVDIWSVGCIFAEMIRRQALFPgDSEFQQLLHIFRLLGTPTeqqwpgvmalrdwhvyPKWEPQDLSRAVPslsPEG 214
Cdd:cd13992   181 RGTQKGDVYSFAIILYEILFRSDPFA-LEREVAIVEKVISGGNKP----------------FRPELAVLLDEFP---PRL 240
                         170
                  ....*....|....*....
gi 1063706111 215 IDLLTQMLKYNPAERISAK 233
Cdd:cd13992   241 VLLVKQCWAENPEKRPSFK 259
STKc_BMPR1b cd14219
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IB; STKs ...
43-232 6.75e-07

Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IB; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1b, also called Activin receptor-Like Kinase 6 (ALK6), functions as a receptor for bone morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Mutations in BMPR1b that led to inhibition of chondrogenesis can cause Brachydactyly (BD) type A2, a dominant hand malformation characterized by shortening and lateral deviation of the index fingers. A point mutation in the BMPR1b kinase domain is also associated with the Booroola phenotype, characterized by precocious differentiation of ovarian follicles. BMPR1b belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1b, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1b subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271121 [Multi-domain]  Cd Length: 305  Bit Score: 49.28  E-value: 6.75e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 DSHRKGS-----NPRPLEASLVQRFMFQLFKGVAHCHSH--------GVLHRDLKPQNLLLDKDkGILKIADLGLSRAFT 109
Cdd:cd14219    83 DYHENGSlydylKSTTLDTKAMLKLAYSSVSGLCHLHTEifstqgkpAIAHRDLKSKNILVKKN-GTCCIADLGLAVKFI 161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 110 -------VPLKAythEIVTLWYRAPEVL---LGSTHYSTAV--DIWSVGCIFAEMIRRqALFPGDSEFQQLLHIFRLLGT 177
Cdd:cd14219   162 sdtnevdIPPNT---RVGTKRYMPPEVLdesLNRNHFQSYImaDMYSFGLILWEVARR-CVSGGIVEEYQLPYHDLVPSD 237
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 178 PTEQQWPGVMALRDWH-VYP-KWEPQDLSRAVPSlspegidLLTQMLKYNPAERISA 232
Cdd:cd14219   238 PSYEDMREIVCIKRLRpSFPnRWSSDECLRQMGK-------LMTECWAHNPASRLTA 287
PK_KSR cd14063
Pseudokinase domain of Kinase Suppressor of Ras; The pseudokinase domain shows similarity to ...
65-163 6.98e-07

Pseudokinase domain of Kinase Suppressor of Ras; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. KSR is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. KSR proteins regulate the assembly and activation of the Raf/MEK/ERK module upon Ras activation at the membrane by direct association of its components. They are widely regarded as pseudokinases, but there is some debate in this designation as a few groups have reported detecting kinase catalytic activity for KSRs, specifically KSR1. Vertebrates contain two KSR proteins, KSR1 and KSR2. The KSR subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270965 [Multi-domain]  Cd Length: 271  Bit Score: 48.88  E-value: 6.98e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlkIADLGL---SRAFTVPLKAYTHEIVTLW--YRAPEVL--------- 130
Cdd:cd14063   105 QICQGMGYLHAKGIIHKDLKSKNIFLENGRVV--ITDFGLfslSGLLQPGRREDTLVIPNGWlcYLAPEIIralspdldf 182
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1063706111 131 LGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDS 163
Cdd:cd14063   183 EESLPFTKASDVYAFGTVWYELLAGRWPFKEQP 215
STKc_NDR_like_fungal cd05629
Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Serine/Threonine Kinases; STKs ...
2-245 7.36e-07

Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension.The fungal NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270778 [Multi-domain]  Cd Length: 377  Bit Score: 49.46  E-value: 7.36e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTR-LEMDEED--SHRK-------GSNpRPLEASL------------- 58
Cdd:cd05629     1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLkSEMFKKDqlAHVKaerdvlaESD-SPWVVSLyysfqdaqylyli 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 ----------------------VQRF-MFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAF------- 108
Cdd:cd05629    80 meflpggdlmtmlikydtfsedVTRFyMAECVLAIEAVHKLGFIHRDIKPDNILIDRG-GHIKLSDFGLSTGFhkqhdsa 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 109 ------------------------TVPLKAYTHEIVTLW----------------YRAPEVLLGSThYSTAVDIWSVGCI 148
Cdd:cd05629   159 yyqkllqgksnknridnrnsvavdSINLTMSSKDQIATWkknrrlmaystvgtpdYIAPEIFLQQG-YGQECDWWSLGAI 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 149 FAEMirrqalfpgdsefqqllhifrLLGtpteqqWPGVMALRDWHVYPK---WE-----PQDLsravpSLSPEGIDLLTQ 220
Cdd:cd05629   238 MFEC---------------------LIG------WPPFCSENSHETYRKiinWRetlyfPDDI-----HLSVEAEDLIRR 285
                         330       340
                  ....*....|....*....|....*...
gi 1063706111 221 MLKyNPAERISAKAALD---HPYFDSLD 245
Cdd:cd05629   286 LIT-NAENRLGRGGAHEiksHPFFRGVD 312
PTKc_Tie cd05047
Catalytic domain of Tie Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
16-153 8.40e-07

Catalytic domain of Tie Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins, consisting of Tie1 and Tie2, are receptor PTKs (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. The Tie subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270641 [Multi-domain]  Cd Length: 270  Bit Score: 48.88  E-value: 8.40e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  16 GKVYKAMEKTT-GKLVA-LKKTR-LEMDEEDSHRKGSNPRPLEASLVQrFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDk 92
Cdd:cd05047    69 GYLYLAIEYAPhGNLLDfLRKSRvLETDPAFAIANSTASTLSSQQLLH-FAADVARGMDYLSQKQFIHRDLAARNILVG- 146
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063706111  93 DKGILKIADLGLSRAFTVPLKAYTHEIVTLWYrAPEVLLGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd05047   147 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM-AIESLNYSV-YTTNSDVWSYGVLLWEIV 205
STKc_BMPR2_AMHR2 cd14054
Catalytic domain of the Serine/Threonine Kinases, Bone Morphogenetic Protein and ...
68-183 9.76e-07

Catalytic domain of the Serine/Threonine Kinases, Bone Morphogenetic Protein and Anti-Muellerian Hormone Type II Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR2 and AMHR2 belong to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors (GDFs), and AMH, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. BMPR2 and AMHR2 act primarily as a receptor for BMPs and AMH, respectively. BMPs induce bone and cartilage formation, as well as regulate tooth, kidney, skin, hair, haematopoietic, and neuronal development. Mutations in BMPR2A is associated with familial pulmonary arterial hypertension. AMH is mainly responsible for the regression of Mullerian ducts during male sex differentiation. It is expressed exclusively by somatic cells of the gonads. Mutations in either AMH or AMHR2 cause persistent Mullerian duct syndrome (PMDS), a rare form of male pseudohermaphroditism characterized by the presence of Mullerian derivatives (ovary and tubes) in otherwise normally masculine males. The BMPR2/AMHR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270956 [Multi-domain]  Cd Length: 300  Bit Score: 48.90  E-value: 9.76e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  68 KGVAHCHSH---------GVLHRDLKPQNLLLDKDkGILKIADLGLS---RAFTVPLKAYTH-------EIVTLWYRAPE 128
Cdd:cd14054   104 RGLAYLHTDlrrgdqykpAIAHRDLNSRNVLVKAD-GSCVICDFGLAmvlRGSSLVRGRPGAaenasisEVGTLRYMAPE 182
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 129 VLLGSTH------YSTAVDIWSVGCIFAEM-IRRQALFPGDSEFQQLLHIFRLLG-TPTEQQW 183
Cdd:cd14054   183 VLEGAVNlrdcesALKQVDVYALGLVLWEIaMRCSDLYPGESVPPYQMPYEAELGnHPTFEDM 245
PKc_Byr1_like cd06620
Catalytic domain of fungal Byr1-like dual-specificity Mitogen-activated protein Kinase Kinases; ...
53-241 1.09e-06

Catalytic domain of fungal Byr1-like dual-specificity Mitogen-activated protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKK kinase Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The Byr-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270792 [Multi-domain]  Cd Length: 286  Bit Score: 48.59  E-value: 1.09e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHS-HGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLkAYTHeIVTLWYRAPEVLL 131
Cdd:cd06620   100 PFPEEVLGKIAVAVLEGLTYLYNvHRIIHRDIKPSNILVNS-KGQIKLCDFGVSGELINSI-ADTF-VGTSTYMSPERIQ 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 132 GSThYSTAVDIWSVGCIFAEMirrqalfpgdsefqqllhifrLLGTpteqqwpgvmalrdwhvYPKWEPQDLSRAvpSLS 211
Cdd:cd06620   177 GGK-YSVKSDVWSLGLSIIEL---------------------ALGE-----------------FPFAGSNDDDDG--YNG 215
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 212 PEGI-DLLTQM-------------------------LKYNPAERISAKAALDHPYF 241
Cdd:cd06620   216 PMGIlDLLQRIvneppprlpkdrifpkdlrdfvdrcLLKDPRERPSPQLLLDHDPF 271
PTKc_Tie1 cd05089
Catalytic domain of the Protein Tyrosine Kinase, Tie1; Protein Tyrosine Kinase (PTK) family; ...
16-153 1.12e-06

Catalytic domain of the Protein Tyrosine Kinase, Tie1; Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development.


Pssm-ID: 270671 [Multi-domain]  Cd Length: 297  Bit Score: 48.46  E-value: 1.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  16 GKVYKAMEKTT-GKLVA-LKKTR-LEMDEEDSHRKGSnPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDk 92
Cdd:cd05089    76 GYLYIAIEYAPyGNLLDfLRKSRvLETDPAFAKEHGT-ASTLTSQQLLQFASDVAKGMQYLSEKQFIHRDLAARNVLVG- 153
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063706111  93 DKGILKIADLGLSRAFTVPLKAYTHEIVTLWYrAPEVLLGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd05089   154 ENLVSKIADFGLSRGEEVYVKKTMGRLPVRWM-AIESLNYSV-YTTKSDVWSFGVLLWEIV 212
STKc_WNK2_like cd14032
Catalytic domain of With No Lysine (WNK) 2-like Serine/Threonine kinases; STKs catalyze the ...
54-173 1.12e-06

Catalytic domain of With No Lysine (WNK) 2-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNK2 is widely expressed and has been shown to be epigenetically silenced in gliomas. It inhibits cell growth by acting as a negative regulator of MEK1-ERK1/2 signaling. WNK2 modulates growth factor-induced cancer cell proliferation, suggesting that it may be a tumor suppressor gene. WNKs comprise a subfamily of STKs with an unusual placement of the catalytic lysine relative to all other protein kinases. They are critical in regulating ion balance and are thus, important components in the control of blood pressure. The WNK2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270934 [Multi-domain]  Cd Length: 266  Bit Score: 48.53  E-value: 1.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHG--VLHRDLKPQNLLLDKDKGILKIADLGLSrafTVPLKAYTHEIV-TLWYRAPEVL 130
Cdd:cd14032   101 MKPKVLRSWCRQILKGLLFLHTRTppIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKSVIgTPEFMAPEMY 177
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1063706111 131 lgSTHYSTAVDIWSVGCIFAEMIRRQALFpgdSEFQQLLHIFR 173
Cdd:cd14032   178 --EEHYDESVDVYAFGMCMLEMATSEYPY---SECQNAAQIYR 215
pk1 PHA03390
serine/threonine-protein kinase 1; Provisional
52-146 1.25e-06

serine/threonine-protein kinase 1; Provisional


Pssm-ID: 223069 [Multi-domain]  Cd Length: 267  Bit Score: 48.31  E-value: 1.25e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  52 RPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLkayTHEiVTLWYRAPEVLL 131
Cdd:PHA03390  104 GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS---CYD-GTLDYFSPEKIK 179
                          90
                  ....*....|....*
gi 1063706111 132 GStHYSTAVDIWSVG 146
Cdd:PHA03390  180 GH-NYDVSFDWWAVG 193
PTKc_Itk cd05112
Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase; PTKs ...
68-152 1.37e-06

Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk, also known as Tsk or Emt, is a member of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. The Itk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133243 [Multi-domain]  Cd Length: 256  Bit Score: 48.02  E-value: 1.37e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  68 KGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRafTVPLKAYTHEIVTLW---YRAPEVLLGStHYSTAVDIWS 144
Cdd:cd05112   111 EGMAYLEEASVIHRDLAARNCLVGENQ-VVKVSDFGMTR--FVLDDQYTSSTGTKFpvkWSSPEVFSFS-RYSSKSDVWS 186

                  ....*...
gi 1063706111 145 VGCIFAEM 152
Cdd:cd05112   187 FGVLMWEV 194
PTKc_Chk cd05083
Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase; PTKs catalyze the ...
61-152 1.39e-06

Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). Chk inhibits Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Like Csk, it is a cytoplasmic (or nonreceptor) tyr kinase containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. To inhibit Src kinases that are anchored to the plasma membrane, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. The Chk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270666 [Multi-domain]  Cd Length: 254  Bit Score: 47.95  E-value: 1.39e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRaftVPLKAYTHEIVTLWYRAPEVlLGSTHYSTAV 140
Cdd:cd05083   104 QFSLDVAEGMEYLESKKLVHRDLAARNILVSED-GVAKISDFGLAK---VGSMGVDNSRLPVKWTAPEA-LKNKKFSSKS 178
                          90
                  ....*....|..
gi 1063706111 141 DIWSVGCIFAEM 152
Cdd:cd05083   179 DVWSYGVLLWEV 190
PTKc_Fes cd05084
Catalytic domain of the Protein Tyrosine Kinase, Fes; PTKs catalyze the transfer of the ...
54-200 1.40e-06

Catalytic domain of the Protein Tyrosine Kinase, Fes; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes (or Fps) is a cytoplasmic (or nonreceptor) PTK containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated PTK activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. The Fes subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270667 [Multi-domain]  Cd Length: 252  Bit Score: 48.00  E-value: 1.40e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYT---HEIVTLWyRAPEVl 130
Cdd:cd05084    92 LKVKELIRMVENAAAGMEYLESKHCIHRDLAARNCLV-TEKNVLKISDFGMSREEEDGVYAATggmKQIPVKW-TAPEA- 168
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 131 LGSTHYSTAVDIWSVGCIFAEMIRRQAL-FPGDSEFQQLLHIFRLLGTPTEQQWPG---VMALRDWHVYPKWEP 200
Cdd:cd05084   169 LNYGRYSSESDVWSFGILLWETFSLGAVpYANLSNQQTREAVEQGVRLPCPENCPDevyRLMEQCWEYDPRKRP 242
PTKc_PDGFR_beta cd05107
Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta; ...
62-178 1.46e-06

Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor PTK (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. The PDGFR beta subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133238 [Multi-domain]  Cd Length: 401  Bit Score: 48.47  E-value: 1.46e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFT------------VPLKaytheivtlwYRAPEV 129
Cdd:cd05107   244 FSYQVANGMEFLASKNCVHRDLAARNVLICEGK-LVKICDFGLARDIMrdsnyiskgstfLPLK----------WMAPES 312
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1063706111 130 LLGSThYSTAVDIWSVGCIFAEmirrqalfpgdsefqqllhIFRLLGTP 178
Cdd:cd05107   313 IFNNL-YTTLSDVWSFGILLWE-------------------IFTLGGTP 341
PK_GC_unk cd14045
Pseudokinase domain of the unknown subfamily of membrane Guanylate Cyclase receptors; The ...
61-163 1.67e-06

Pseudokinase domain of the unknown subfamily of membrane Guanylate Cyclase receptors; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs lack a critical aspartate involved in ATP binding and does not exhibit kinase activity. It functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270947 [Multi-domain]  Cd Length: 269  Bit Score: 47.93  E-value: 1.67e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMF--QLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLsRAF-----TVPLKAYTHEIVTLwYRAPEV-LLG 132
Cdd:cd14045   105 RFSFatDIARGMAYLHQHKIYHGRLKSSNCVID-DRWVCKIADYGL-TTYrkedgSENASGYQQRLMQV-YLPPENhSNT 181
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1063706111 133 STHYSTAVDIWSVGCIFAEMIRRQALFPGDS 163
Cdd:cd14045   182 DTEPTQATDVYSYAIILLEIATRNDPVPEDD 212
STKc_DMPK_like cd05597
Catalytic domain of Myotonic Dystrophy protein kinase (DMPK)-like Serine/Threonine Kinases; ...
74-163 1.90e-06

Catalytic domain of Myotonic Dystrophy protein kinase (DMPK)-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. Three isoforms of MRCK are known, named alpha, beta and gamma. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270748 [Multi-domain]  Cd Length: 331  Bit Score: 48.11  E-value: 1.90e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDKDkGILKIADLG----LSRAFTVplkAYTHEIVTLWYRAPEVLL----GSTHYSTAVDIWSV 145
Cdd:cd05597   119 HQLGYVHRDIKPDNVLLDRN-GHIRLADFGsclkLREDGTV---QSSVAVGTPDYISPEILQamedGKGRYGPECDWWSL 194
                          90
                  ....*....|....*....
gi 1063706111 146 G-CIFaEMIRRQALFPGDS 163
Cdd:cd05597   195 GvCMY-EMLYGETPFYAES 212
STKc_aPKC cd05588
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C; STKs catalyze the ...
74-153 2.06e-06

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270740 [Multi-domain]  Cd Length: 328  Bit Score: 47.80  E-value: 2.06e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGStHYSTAVDIWSVGCIFAEMI 153
Cdd:cd05588   113 HEKGIIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEML 190
PTKc_Fer cd05085
Catalytic domain of the Protein Tyrosine Kinase, Fer; Protein Tyrosine Kinase (PTK) family; ...
61-201 2.16e-06

Catalytic domain of the Protein Tyrosine Kinase, Fer; Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells.


Pssm-ID: 270668 [Multi-domain]  Cd Length: 251  Bit Score: 47.31  E-value: 2.16e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFT--VPLKAYTHEIVTLWyRAPEVlLGSTHYST 138
Cdd:cd05085    98 KFSLDAAAGMAYLESKNCIHRDLAARNCLVG-ENNALKISDFGMSRQEDdgVYSSSGLKQIPIKW-TAPEA-LNYGRYSS 174
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063706111 139 AVDIWSVGCIFAEMIRRQAL-FPGDSEFQQLLHIFRLLGTPTEQQWP----GVMaLRDWHVYPKWEPQ 201
Cdd:cd05085   175 ESDVWSFGILLWETFSLGVCpYPGMTNQQAREQVEKGYRMSAPQRCPediyKIM-QRCWDYNPENRPK 241
PTKc_Aatyk3 cd14206
Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 3; PTKs ...
53-152 2.38e-06

Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk3, also called lemur tyrosine kinase 3 (Lmtk3) is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. The function of Aatyk3 is still unknown. The Aatyk3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 271108 [Multi-domain]  Cd Length: 276  Bit Score: 47.64  E-value: 2.38e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRA------FTVPLKAYtheiVTLWYRA 126
Cdd:cd14206   103 TRDLRTLQRMAYEITLGLLHLHKNNYIHSDLALRNCLLTSDLTV-RIGDYGLSHNnykedyYLTPDRLW----IPLRWVA 177
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1063706111 127 PEvLLGSTHYSTAV-------DIWSVGCIFAEM 152
Cdd:cd14206   178 PE-LLDELHGNLIVvdqskesNVWSLGVTIWEL 209
PTKc_Jak3_rpt2 cd05081
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 3; PTKs catalyze the ...
54-152 2.79e-06

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak3 is expressed only in hematopoietic cells. It binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Jak3 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270665 [Multi-domain]  Cd Length: 283  Bit Score: 47.20  E-value: 2.79e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  54 LEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYT----HEIVTLWYrAPEV 129
Cdd:cd05081   105 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV-KIADFGLAKLLPLDKDYYVvrepGQSPIFWY-APES 182
                          90       100
                  ....*....|....*....|...
gi 1063706111 130 LLGSThYSTAVDIWSVGCIFAEM 152
Cdd:cd05081   183 LSDNI-FSRQSDVWSFGVVLYEL 204
PKc_TNNI3K cd14064
Catalytic domain of the Dual-specificity protein kinase, TNNI3-interacting kinase; ...
10-168 2.87e-06

Catalytic domain of the Dual-specificity protein kinase, TNNI3-interacting kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TNNI3K, also called cardiac ankyrin repeat kinase (CARK), is a cardiac-specific troponin I-interacting kinase that promotes cardiac myogenesis, improves cardiac performance, and protects the myocardium from ischemic injury. It contains N-terminal ankyrin repeats, a catalytic kinase domain, and a C-terminal serine-rich domain. TNNI3K exerts a disease-accelerating effect on cardiac dysfunction and reduced survival in mouse models of cardiomyopathy. The TNNI3K subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270966 [Multi-domain]  Cd Length: 254  Bit Score: 47.14  E-value: 2.87e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAmeKTTGKLVALKKTRL-------EMD-------------------------EEDSH------------ 45
Cdd:cd14064     1 IGSGSFGKVYKG--RCRNKIVAIKRYRAntycsksDVDmfcrevsilcrlnhpcviqfvgaclDDPSQfaivtqyvsggs 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 ---RKGSNPRPLEASLVQRFMFQLFKGVAHCH--SHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAF-TVPLKAYTHEI 119
Cdd:cd14064    79 lfsLLHEQKRVIDLQSKLIIAVDVAKGMEYLHnlTQPIIHRDLNSHNILLYED-GHAVVADFGESRFLqSLDEDNMTKQP 157
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1063706111 120 VTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEmirrqaLFPGDSEFQQL 168
Cdd:cd14064   158 GNLRWMAPEVFTQCTRYSIKADVFSYALCLWE------LLTGEIPFAHL 200
STKc_RIP4_like cd14025
Catalytic domain of the Serine/Threonine kinases, Receptor Interacting Protein 4 and similar ...
8-171 3.01e-06

Catalytic domain of the Serine/Threonine kinases, Receptor Interacting Protein 4 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of RIP4, ankyrin (ANK) repeat and kinase domain containing 1 (ANKK1), and similar proteins, all of which harbor C-terminal ANK repeats. RIP4, also called Protein Kinase C-associated kinase (PKK), regulates keratinocyte differentiation and cutaneous inflammation. It activates NF-kappaB and is important in the survival of diffuse large B-cell lymphoma cells. The ANKK1 protein, also called PKK2, has not been studied extensively. The ANKK1 gene, located less than 10kb downstream of the D2 dopamine receptor (DRD2) locus, is altered in the Taq1 A1 polymorphism, which is related to a reduced DRD2 binding affinity and consequently, to mental disorders. The RIP4-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270927 [Multi-domain]  Cd Length: 267  Bit Score: 47.10  E-value: 3.01e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   8 EKVGEGTYGKVYKAMEKTTGKLVALK---------KTRLEMDEEDSHRKGSNPRPL---------EASLVQRFM------ 63
Cdd:cd14025     2 EKVGSGGFGQVYKVRHKHWKTWLAIKcppslhvddSERMELLEEAKKMEMAKFRHIlpvygicsePVGLVMEYMetgsle 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 -------------FQLFKGVA------HCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVplkAYTHEIV---- 120
Cdd:cd14025    82 kllaseplpwelrFRIIHETAvgmnflHCMKPPLLHLDLKPANILLDAHYHV-KISDFGLAKWNGL---SHSHDLSrdgl 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063706111 121 --TLWYRAPEVLLGSTH-YSTAVDIWSVGCIFAEMIRRQALFpgdSEFQQLLHI 171
Cdd:cd14025   158 rgTIAYLPPERFKEKNRcPDTKHDVYSFAIVIWGILTQKKPF---AGENNILHI 208
STKc_TBK1 cd13988
Catalytic domain of the Serine/Threonine kinase, TANK Binding Kinase 1; STKs catalyze the ...
10-149 3.39e-06

Catalytic domain of the Serine/Threonine kinase, TANK Binding Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TBK1 is also called T2K and NF-kB-activating kinase. It is widely expressed in most cell types and acts as an IkappaB kinase (IKK)-activating kinase responsible for NF-kB activation in response to growth factors. It plays a role in modulating inflammatory responses through the NF-kB pathway. TKB1 is also a major player in innate immune responses since it functions as a virus-activated kinase necessary for establishing an antiviral state. It phosphorylates IRF-3 and IRF-7, which are important transcription factors for inducing type I interferon during viral infection. In addition, TBK1 may also play roles in cell transformation and oncogenesis. The TBK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270890 [Multi-domain]  Cd Length: 316  Bit Score: 47.10  E-value: 3.39e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVA----------------------LKK------TRLEMDEEDSHRKG------------- 48
Cdd:cd13988     1 LGQGATANVFRGRHKKTGDLYAvkvfnnlsfmrpldvqmrefevLKKlnhkniVKLFAIEEELTTRHkvlvmelcpcgsl 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 -------SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLL--LDKD-KGILKIADLGLSRAFT-----VPL- 112
Cdd:cd13988    81 ytvleepSNAYGLPESEFLIVLRDVVAGMNHLRENGIVHRDIKPGNIMrvIGEDgQSVYKLTDFGAARELEddeqfVSLy 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1063706111 113 --KAYTHEivTLWYRApeVLLGSTH--YSTAVDIWSVGCIF 149
Cdd:cd13988   161 gtEEYLHP--DMYERA--VLRKDHQkkYGATVDLWSIGVTF 197
PTKc_Syk_like cd05060
Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
63-152 4.20e-06

Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Syk-like subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. The Syk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270650 [Multi-domain]  Cd Length: 257  Bit Score: 46.57  E-value: 4.20e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  63 MFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTV-------------PLKaytheivtlWYrAPEV 129
Cdd:cd05060   101 AHQVAMGMAYLESKHFVHRDLAARNVLL-VNRHQAKISDFGMSRALGAgsdyyrattagrwPLK---------WY-APEC 169
                          90       100
                  ....*....|....*....|...
gi 1063706111 130 LLGSThYSTAVDIWSVGCIFAEM 152
Cdd:cd05060   170 INYGK-FSSKSDVWSYGVTLWEA 191
PTKc_TAM cd05035
Catalytic Domain of TAM (Tyro3, Axl, Mer) Protein Tyrosine Kinases; PTKs catalyze the transfer ...
44-169 4.59e-06

Catalytic Domain of TAM (Tyro3, Axl, Mer) Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The TAM subfamily consists of Tyro3 (or Sky), Axl, Mer (or Mertk), and similar proteins. TAM subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. TAM proteins are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. The TAM subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270631 [Multi-domain]  Cd Length: 273  Bit Score: 46.76  E-value: 4.59e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 SHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGLSRaftvplKAYTHEivtlW 123
Cdd:cd05035   100 YSRLGGLPEKLPLQTLLKFMVDIAKGMEYLSNRNFIHRDLAARNCMLDENMTVC-VADFGLSR------KIYSGD----Y 168
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 124 YRAPEVL-----------LGSTHYSTAVDIWSVGCIFAE-MIRRQALFPG--DSEFQQLL 169
Cdd:cd05035   169 YRQGRISkmpvkwialesLADNVYTSKSDVWSFGVTMWEiATRGQTPYPGveNHEIYDYL 228
STKc_TLK1 cd14040
Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 1; STKs catalyze the ...
78-241 4.79e-06

Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. A splice variant of TLK1, called TLK1B, is expressed in the presence of double strand breaks (DSBs). It lacks the N-terminal part of TLK1, but is expected to phosphorylate the same substrates. TLK1/1B interacts with Rad9, which is critical in DNA damage-activated checkpoint response, and plays a role in the repair of linearized DNA with incompatible ends. TLKs play important functions during the cell cycle and are implicated in chromatin remodeling, DNA replication and repair, and mitosis. The TLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270942 [Multi-domain]  Cd Length: 299  Bit Score: 46.59  E-value: 4.79e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  78 VLHRDLKPQNLLLDKDK--GILKIADLGLSR-----AFTVPLKAYTHEIV-TLWYRAPEVLLGSTH---YSTAVDIWSVG 146
Cdd:cd14040   134 IIHYDLKPGNILLVDGTacGEIKITDFGLSKimdddSYGVDGMDLTSQGAgTYWYLPPECFVVGKEppkISNKVDVWSVG 213
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 147 CIFAEMIRRQALFPGDSEFQQLLHIFRLLgTPTEQQWPgvmalrdwhvypkwepqdlsrAVPSLSPEGIDLLTQMLKYNP 226
Cdd:cd14040   214 VIFFQCLYGRKPFGHNQSQQDILQENTIL-KATEVQFP---------------------VKPVVSNEAKAFIRRCLAYRK 271
                         170
                  ....*....|....*
gi 1063706111 227 AERISAKAALDHPYF 241
Cdd:cd14040   272 EDRFDVHQLASDPYL 286
STKc_Unc-89_rpt2 cd14112
Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Uncoordinated ...
59-238 4.84e-06

Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein 89; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nematode Unc-89 gene, through alternative promoter use and splicing, encodes at least six major isoforms (Unc-89A to Unc-89F) of giant muscle proteins that are homologs for the vetebrate obscurin. In flies, five isoforms of Unc-89 have been detected: four in the muscles of adult flies (two in the indirect flight muscle and two in other muscles) and another isoform in the larva. Unc-89 in nematodes is required for normal muscle cell architecture. In flies, it is necessary for the development of a symmetrical sarcomere in the flight muscles. Unc-89 proteins contain several adhesion and signaling domains including multiple copies of the immunoglobulin (Ig) domain, as well as fibronectin type III (FN3), SH3, RhoGEF, and PH domains. The nematode Unc-89 isoforms D, C, D, and F contain two kinase domain with B and F having two complete kinase domains while the first repeat of C and D are partial domains. Homology modeling suggests that the first kinase repeat of Unc-89 may be catalytically inactive, a pseudokinase, while the second kinase repeat may be active. The Unc-89 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271014 [Multi-domain]  Cd Length: 259  Bit Score: 46.37  E-value: 4.84e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGI-LKIADLG----LSRAFTVPLKAYTHeivtlwYRAPEVLLGS 133
Cdd:cd14112   101 VATTVRQILDALHYLHFKGIAHLDVQPDNIMFQSVRSWqVKLVDFGraqkVSKLGKVPVDGDTD------WASPEFHNPE 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 134 THYSTAVDIWSVGCIfaemirRQALFPGDSEFQQllhifrllGTPTEQQwpgvmaLRDWHVYPKWEPQDLSRAVpslSPE 213
Cdd:cd14112   175 TPITVQSDIWGLGVL------TFCLLSGFHPFTS--------EYDDEEE------TKENVIFVKCRPNLIFVEA---TQE 231
                         170       180
                  ....*....|....*....|....*
gi 1063706111 214 GIDLLTQMLKYNPAERISAKAALDH 238
Cdd:cd14112   232 ALRFATWALKKSPTRRMRTDEALEH 256
PTKc_EGFR cd05108
Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor; PTKs ...
65-153 5.63e-06

Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a receptor PTK (RTK) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. The EGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270683 [Multi-domain]  Cd Length: 313  Bit Score: 46.55  E-value: 5.63e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYTHE--IVTLWYRAPEVLLGSThYSTAVDI 142
Cdd:cd05108   117 QIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEggKVPIKWMALESILHRI-YTHQSDV 194
                          90
                  ....*....|.
gi 1063706111 143 WSVGCIFAEMI 153
Cdd:cd05108   195 WSYGVTVWELM 205
PTKc_CSF-1R cd05106
Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor; PTKs ...
38-152 5.87e-06

Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. The CSF-1R subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133237 [Multi-domain]  Cd Length: 374  Bit Score: 46.76  E-value: 5.87e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  38 EMDEEDShrkgsnpRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFT-------- 109
Cdd:cd05106   200 EEDTEDS-------WPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL-TDGRVAKICDFGLARDIMndsnyvvk 271
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1063706111 110 ----VPLKaytheivtlwYRAPEVLLGSThYSTAVDIWSVGCIFAEM 152
Cdd:cd05106   272 gnarLPVK----------WMAPESIFDCV-YTVQSDVWSYGILLWEI 307
STKc_Bub1_BubR1 cd13981
Catalytic domain of the Serine/Threonine kinases, Spindle assembly checkpoint proteins Bub1 ...
9-92 6.62e-06

Catalytic domain of the Serine/Threonine kinases, Spindle assembly checkpoint proteins Bub1 and BubR1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Bub1 (Budding uninhibited by benzimidazoles 1), BubR1, and similar proteins. They contain an N-terminal Bub1/Mad3 homology domain essential for Cdc20 binding and a C-terminal kinase domain. Bub1 and BubR1 are involved in SAC, a surveillance system that delays metaphase to anaphase transition by blocking the activity of APC/C (the anaphase promoting complex) until all chromosomes achieve proper attachments to the mitotic spindle, to avoid chromosome missegregation. Impaired SAC leads to genomic instabilities and tumor development. Bub1 and BubR1 facilitate the localization of SAC proteins to kinetochores and regulate kinetochore-microtubule (K-MT) attachments. Repression studies of Bub1 and BubR1 show that they exert an additive effect in misalignment phenotypes and may function cooperatively or in parallel pathways in regulating K-MT attachments. The Bub1/BubR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270883 [Multi-domain]  Cd Length: 298  Bit Score: 46.20  E-value: 6.62e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   9 KVGEGTYGKVYKA---MEKTTGKLVALK----------------KTRLE---MDE------------------EDSHRKG 48
Cdd:cd13981     7 ELGEGGYASVYLAkddDEQSDGSLVALKvekppsiwefyicdqlHSRLKnsrLREsisgahsahlfqdesilvMDYSSQG 86
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111  49 S-----------NPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDK 92
Cdd:cd13981    87 TlldvvnkmknkTGGGMDEPLAMFFTIELLKVVEALHEVGIIHGDIKPDNFLLRL 141
STKc_ACVR1_ALK1 cd14142
Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin ...
45-155 7.11e-06

Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR1, also called Activin receptor-Like Kinase 2 (ALK2), and ALK1 act as receptors for bone morphogenetic proteins (BMPs) and they activate SMAD1/5/8. ACVR1 is widely expressed while ALK1 is limited mainly to endothelial cells. The specificity of BMP binding to type I receptors is affected by type II receptors. ACVR1 binds BMP6/7/9/10 and can also bind anti-Mullerian hormone (AMH) in the presence of AMHR2. ALK1 binds BMP9/10 as well as TGFbeta in endothelial cells. A missense mutation in the GS domain of ACVR1 causes fibrodysplasia ossificans progressiva, a complex and disabling disease characterized by congenital skeletal malformations and extraskeletal bone formation. ACVR1 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and AMH, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like ACVR1 and ALK1, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The ACVR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271044 [Multi-domain]  Cd Length: 298  Bit Score: 46.28  E-value: 7.11e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 HRKGS-----NPRPLEASLVQRFMFQLFKGVAHCHS-----HG---VLHRDLKPQNLLLDKDkGILKIADLGLSRAFTVP 111
Cdd:cd14142    85 HENGSlydylQRTTLDHQEMLRLALSAASGLVHLHTeifgtQGkpaIAHRDLKSKNILVKSN-GQCCIADLGLAVTHSQE 163
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 112 LK----AYTHEIVTLWYRAPEVLLGSTHYST-----AVDIWSVGCIFAEMIRR 155
Cdd:cd14142   164 TNqldvGNNPRVGTKRYMAPEVLDETINTDCfesykRVDIYAFGLVLWEVARR 216
PTKc_InsR_like cd05032
Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer ...
1-152 8.37e-06

Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. InsR and IGF-1R are receptor PTKs (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. The InsR-like subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173625 [Multi-domain]  Cd Length: 277  Bit Score: 45.80  E-value: 8.37e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGK-----LVALKKT--------RLE-------MDEEDSH--------------- 45
Cdd:cd05032     5 REKITLIRELGQGSFGMVYEGLAKGVVKgepetRVAIKTVnenasmreRIEflneasvMKEFNCHhvvrllgvvstgqpt 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  46 -----------------------RKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADL 102
Cdd:cd05032    85 lvvmelmakgdlksylrsrrpeaENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED-LTVKIGDF 163
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 103 GLSRaftvplKAYTHEivtlWYR------------APEVlLGSTHYSTAVDIWSVGCIFAEM 152
Cdd:cd05032   164 GMTR------DIYETD----YYRkggkgllpvrwmAPES-LKDGVFTTKSDVWSFGVVLWEM 214
PTKc_Syk cd05116
Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase; PTKs catalyze the ...
59-151 8.75e-06

Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk is a cytoplasmic (or nonreceptor) PTK containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. It is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for EGFR signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). The Syk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133247 [Multi-domain]  Cd Length: 257  Bit Score: 45.72  E-value: 8.75e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  59 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVP---LKAYTHEIVTLWYRAPEVlLGSTH 135
Cdd:cd05116    97 ITELVHQVSMGMKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLSKALRADenyYKAQTHGKWPVKWYAPEC-MNYYK 174
                          90
                  ....*....|....*.
gi 1063706111 136 YSTAVDIWSVGCIFAE 151
Cdd:cd05116   175 FSSKSDVWSFGVLMWE 190
STKc_ACVR2a cd14141
Catalytic domain of the Serine/Threonine Kinase, Activin Type IIA Receptor; STKs catalyze the ...
45-155 9.14e-06

Catalytic domain of the Serine/Threonine Kinase, Activin Type IIA Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2a (or ActRIIA) belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. ACVR2b is one of two ACVR2 receptors found in vertebrates. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. The ACVR2a subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271043 [Multi-domain]  Cd Length: 290  Bit Score: 45.80  E-value: 9.14e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 HRKGSNPRPLEASLVQ-----RFMFQLFKGVAHCHSH----------GVLHRDLKPQNLLLdKDKGILKIADLGLSRAFT 109
Cdd:cd14141    75 HEKGSLTDYLKANVVSwnelcHIAQTMARGLAYLHEDipglkdghkpAIAHRDIKSKNVLL-KNNLTACIADFGLALKFE 153
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063706111 110 VPLKAY-TH-EIVTLWYRAPEVLLGSTHYST----AVDIWSVGCIFAEMIRR 155
Cdd:cd14141   154 AGKSAGdTHgQVGTRRYMAPEVLEGAINFQRdaflRIDMYAMGLVLWELASR 205
STKc_ACVR2b cd14140
Catalytic domain of the Serine/Threonine Kinase, Activin Type IIB Receptor; STKs catalyze the ...
74-155 1.07e-05

Catalytic domain of the Serine/Threonine Kinase, Activin Type IIB Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2b (or ActRIIB) belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. ACVR2b is one of two ACVR2 receptors found in vertebrates. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. The ACVR2b subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271042 [Multi-domain]  Cd Length: 291  Bit Score: 45.79  E-value: 1.07e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDKDKGILkIADLGLSRAFTvPLK--AYTH-EIVTLWYRAPEVLLGSTHYST----AVDIWSVG 146
Cdd:cd14140   120 HKPAIAHRDFKSKNVLLKNDLTAV-LADFGLAVRFE-PGKppGDTHgQVGTRRYMAPEVLEGAINFQRdsflRIDMYAMG 197

                  ....*....
gi 1063706111 147 CIFAEMIRR 155
Cdd:cd14140   198 LVLWELVSR 206
PTKc_Hck cd05073
Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase; PTKs catalyze the ...
62-200 1.17e-05

Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of G-CSF-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes. Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Hck subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270658 [Multi-domain]  Cd Length: 265  Bit Score: 45.40  E-value: 1.17e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRafTVPLKAYTHE---IVTLWYRAPEVL-LGSthYS 137
Cdd:cd05073   112 FSAQIAEGMAFIEQRNYIHRDLRAANILVSA-SLVCKIADFGLAR--VIEDNEYTARegaKFPIKWTAPEAInFGS--FT 186
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063706111 138 TAVDIWSVGCIFAEMIRR-QALFPGDSE---FQQLLHIFRLLGTPTEQQWPGVMALRDWHVYPKWEP 200
Cdd:cd05073   187 IKSDVWSFGILLMEIVTYgRIPYPGMSNpevIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERP 253
PTKc_Ror cd05048
Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan ...
7-160 1.20e-05

Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Ror subfamily consists of Ror1, Ror2, and similar proteins. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. The Ror subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270642 [Multi-domain]  Cd Length: 283  Bit Score: 45.44  E-value: 1.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   7 LEKVGEGTYGKVYKA-------MEKTTgkLVALK--------KTRLEMDEE----------------------------- 42
Cdd:cd05048    10 LEELGEGAFGKVYKGellgpssEESAI--SVAIKtlkenaspKTQQDFRREaelmsdlqhpnivcllgvctkeqpqcmlf 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  43 ------DSHR----------------KGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIA 100
Cdd:cd05048    88 eymahgDLHEflvrhsphsdvgvssdDDGTASSLDQSDFLHIAIQIAAGMEYLSSHHYVHRDLAARNCLVG-DGLTVKIS 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 101 DLGLSRaftvplKAYTHEivtlWYR------------APEVLLgSTHYSTAVDIWSVGC----IFA-------------- 150
Cdd:cd05048   167 DFGLSR------DIYSSD----YYRvqsksllpvrwmPPEAIL-YGKFTTESDVWSFGVvlweIFSyglqpyygysnqev 235
                         250
                  ....*....|.
gi 1063706111 151 -EMIRRQALFP 160
Cdd:cd05048   236 iEMIRSRQLLP 246
STKc_WNK1 cd14030
Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 1; STKs catalyze ...
65-241 1.21e-05

Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNK1 is widely expressed and is most abundant in the testis. In hyperosmotic or hypotonic low-chloride stress conditions, WNK1 is activated and it phosphorylates its substrates including SPAK and OSR1 kinases, which regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. Mutations in WNK1 cause PseudoHypoAldosteronism type II (PHAII), characterized by hypertension and hyperkalemia. WNK1 negates WNK4-mediated inhibition of the sodium-chloride cotransporter NCC and activates the epithelial sodium channel ENaC by activating SGK1. WNK1 also decreases the surface expression of renal outer medullary potassium channel (ROMK) by stimulating their endocytosis. Hypertension and hyperkalemia in PHAII patients with WNK1 mutations may be due partly to increased activity of NCC and ENaC, and impaired renal potassium secretion by ROMK, respectively. In addition, WNK1 interacts with MEKK2/3 and acts as an activator of extracellular signal-regulated kinase (ERK) 5. It also negatively regulates TGFbeta signaling. WNKs comprise a subfamily of STKs with an unusual placement of the catalytic lysine relative to all other protein kinases. The WNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270932 [Multi-domain]  Cd Length: 289  Bit Score: 45.43  E-value: 1.21e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHG--VLHRDLKPQNLLLDKDKGILKIADLGLSrafTVPLKAYTHEIV-TLWYRAPEVLlgSTHYSTAVD 141
Cdd:cd14030   136 QILKGLQFLHTRTppIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKSVIgTPEFMAPEMY--EEKYDESVD 210
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 142 IWSVGCIFAEMIRRQALFpgdSEFQQLLHIFRLLGTpteqqwpGVmalrdwhvypkwEPQDLSRAVpslSPEGIDLLTQM 221
Cdd:cd14030   211 VYAFGMCMLEMATSEYPY---SECQNAAQIYRRVTS-------GV------------KPASFDKVA---IPEVKEIIEGC 265
                         170       180
                  ....*....|....*....|
gi 1063706111 222 LKYNPAERISAKAALDHPYF 241
Cdd:cd14030   266 IRQNKDERYAIKDLLNHAFF 285
PTKc_Lyn cd05072
Catalytic domain of the Protein Tyrosine Kinase, Lyn; PTKs catalyze the transfer of the ...
62-184 1.35e-05

Catalytic domain of the Protein Tyrosine Kinase, Lyn; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Lyn subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270657 [Multi-domain]  Cd Length: 272  Bit Score: 45.03  E-value: 1.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRafTVPLKAYTHE---IVTLWYRAPEVL-LGSthYS 137
Cdd:cd05072   109 FSAQIAEGMAYIERKNYIHRDLRAANVLV-SESLMCKIADFGLAR--VIEDNEYTARegaKFPIKWTAPEAInFGS--FT 183
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1063706111 138 TAVDIWSVGCIFAEMIRRQAL-FPGDSEFQQLLHIFRLLGTPTEQQWP 184
Cdd:cd05072   184 IKSDVWSFGILLYEIVTYGKIpYPGMSNSDVMSALQRGYRMPRMENCP 231
PTKc_Csk cd05082
Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase; PTKs catalyze the ...
61-152 1.46e-05

Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Csk is a cytoplasmic (or nonreceptor) PTK containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. The Csk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133213 [Multi-domain]  Cd Length: 256  Bit Score: 44.97  E-value: 1.46e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  61 RFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFTVPLKayTHEIVTLWyRAPEVLLgSTHYSTAV 140
Cdd:cd05082   106 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALR-EKKFSTKS 180
                          90
                  ....*....|..
gi 1063706111 141 DIWSVGCIFAEM 152
Cdd:cd05082   181 DVWSFGILLWEI 192
STKc_DAPK3 cd14195
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 3; STKs ...
4-171 1.47e-05

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK3, also called DAP-like kinase (DLK) and zipper-interacting protein kinase (ZIPk), contains an N-terminal kinase domain and a C-terminal region with nuclear localization signals (NLS) and a leucine zipper motif that mediates homodimerization and interaction with other leucine zipper proteins. It interacts with Par-4, a protein that contains a death domain and interacts with actin filaments. DAPK3 is present in both the cytoplasm and nucleus. Its co-expression with Par-4 results in the co-localization of the two proteins to actin filaments. In addition to cell death, DAPK3 is also implicated in mediating cell motility and the contraction of smooth muscles. The DAPK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271097 [Multi-domain]  Cd Length: 271  Bit Score: 44.99  E-value: 1.47e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   4 YEKLEKVGEGTYGKVYKAMEKTTGKLVA---LKKTRLE-----MDEEDSHRKGSNPRPLEAS------------------ 57
Cdd:cd14195     7 YEMGEELGSGQFAIVRKCREKGTGKEYAakfIKKRRLSssrrgVSREEIEREVNILREIQHPniitlhdifenktdvvli 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  58 ------------LVQR----------FMFQLFKGVAHCHSHGVLHRDLKPQN-LLLDKD--KGILKIADLGLSRAFTVPl 112
Cdd:cd14195    87 lelvsggelfdfLAEKeslteeeatqFLKQILDGVHYLHSKRIAHFDLKPENiMLLDKNvpNPRIKLIDFGIAHKIEAG- 165
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1063706111 113 KAYTHEIVTLWYRAPEVlLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHI 171
Cdd:cd14195   166 NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI 223
PTKc_Src_like cd05034
Catalytic domain of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of ...
62-153 1.59e-05

Catalytic domain of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. The Src-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270630 [Multi-domain]  Cd Length: 248  Bit Score: 44.97  E-value: 1.59e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAF-----------TVPLKaytheivtlWyRAPEVL 130
Cdd:cd05034    97 MAAQIASGMAYLESRNYIHRDLAARNILVG-ENNVCKVADFGLARLIeddeytaregaKFPIK---------W-TAPEAA 165
                          90       100
                  ....*....|....*....|...
gi 1063706111 131 LGSThYSTAVDIWSVGCIFAEMI 153
Cdd:cd05034   166 LYGR-FTIKSDVWSFGILLYEIV 187
STKc_NDR2 cd05627
Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2; STKs catalyze ...
1-153 1.61e-05

Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NDR2 (also called STK38-like) plays a role in proper centrosome duplication. In addition, it is involved in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. NDR2 is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. The NDR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270776 [Multi-domain]  Cd Length: 366  Bit Score: 45.43  E-value: 1.61e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDSHRKGSNPRPLEAS------------------LV 59
Cdd:cd05627     1 LDDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKilrKADMLEKEQVAHIRAERDILVEADgawvvkmfysfqdkrnlyLI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  60 QRF------MFQLFK------------------GVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAF-----TV 110
Cdd:cd05627    81 MEFlpggdmMTLLMKkdtlseeatqfyiaetvlAIDAIHQLGFIHRDIKPDNLLLDA-KGHVKLSDFGLCTGLkkahrTE 159
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 111 PLKAYTHE------------------------------IVTLWYRAPEVLLgSTHYSTAVDIWSVGCIFAEMI 153
Cdd:cd05627   160 FYRNLTHNppsdfsfqnmnskrkaetwkknrrqlaystVGTPDYIAPEVFM-QTGYNKLCDWWSLGVIMYEML 231
PTKc_EphR_A cd05066
Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors; PTKs catalyze ...
69-153 1.85e-05

Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10. Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphA receptors and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. EphRs comprise the largest subfamily of receptor PTKs (RTKs). EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270651 [Multi-domain]  Cd Length: 267  Bit Score: 44.86  E-value: 1.85e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 GVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFT-VPLKAYTH---EIVTLWyRAPEVLLGSThYSTAVDIWS 144
Cdd:cd05066   118 GMKYLSDMGYVHRDLAARNILVNSNL-VCKVSDFGLSRVLEdDPEAAYTTrggKIPIRW-TAPEAIAYRK-FTSASDVWS 194

                  ....*....
gi 1063706111 145 VGCIFAEMI 153
Cdd:cd05066   195 YGIVMWEVM 203
PKc_LIMK_like_unk cd14156
Catalytic domain of an unknown subfamily of LIM domain kinase-like protein kinases; PKs ...
10-164 2.10e-05

Catalytic domain of an unknown subfamily of LIM domain kinase-like protein kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This group is composed of uncharacterized proteins with similarity to LIMK and Testicular or testis-specific protein kinase (TESK). LIMKs are characterized as serine/threonine kinases (STKs) while TESKs are dual-specificity protein kinases. Both LIMK and TESK phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They are implicated in many cellular functions including cell spreading, motility, morphogenesis, meiosis, mitosis, and spermatogenesis. The LIMK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271058 [Multi-domain]  Cd Length: 256  Bit Score: 44.43  E-value: 2.10e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  10 VGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEDSHRKGSNPRPLEASLVQRFM-------------------------- 63
Cdd:cd14156     1 IGSGFFSKVYKVTHGATGKVMVVKIYKNDVDQHKIVREISLLQKLSHPNIVRYLgicvkdeklhpileyvsggcleella 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  64 ---------------FQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILK--IADLGLSRAF-TVPLKAYTHEIV---TL 122
Cdd:cd14156    81 reelplswrekvelaCDISRGMVYLHSKNIYHRDLNSKNCLIRVTPRGREavVTDFGLAREVgEMPANDPERKLSlvgSA 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 123 WYRAPEVLLGSThYSTAVDIWSVGCIFAEMIRRqalFPGDSE 164
Cdd:cd14156   161 FWMAPEMLRGEP-YDRKVDVFSFGIVLCEILAR---IPADPE 198
PTKc_Aatyk cd05042
Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases; PTKs ...
53-173 2.34e-05

Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. Aatyk proteins are mostly receptor PTKs (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as PTKs based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. The Aatyk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270638 [Multi-domain]  Cd Length: 269  Bit Score: 44.50  E-value: 2.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  53 PLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLsrAFTVPLKAYTHEIVTLW----YRAPE 128
Cdd:cd05042    96 DSDTRTLQRMACEVAAGLAHLHKLNFVHSDLALRNCLLTSDLTV-KIGDYGL--AHSRYKEDYIETDDKLWfplrWTAPE 172
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063706111 129 vLLGSTHYSTAV-------DIWSVGCIFAEMIRRQAL-FPGDSEFQQLLHIFR 173
Cdd:cd05042   173 -LVTEFHDRLLVvdqtkysNIWSLGVTLWELFENGAQpYSNLSDLDVLAQVVR 224
PTKc_Csk_like cd05039
Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
62-152 2.54e-05

Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of Csk, Chk, and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. The Csk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270635 [Multi-domain]  Cd Length: 256  Bit Score: 44.26  E-value: 2.54e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDkGILKIADLGLSRAFTvplkaYTHEIVTL---WyRAPEVLLGSThYST 138
Cdd:cd05039   107 FALDVCEGMEYLESKKFVHRDLAARNVLVSED-NVAKVSDFGLAKEAS-----SNQDGGKLpikW-TAPEALREKK-FST 178
                          90
                  ....*....|....
gi 1063706111 139 AVDIWSVGCIFAEM 152
Cdd:cd05039   179 KSDVWSFGILLWEI 192
PTKc_PDGFR cd05055
Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors; ...
62-152 2.68e-05

Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. The PDGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase .


Pssm-ID: 133186 [Multi-domain]  Cd Length: 302  Bit Score: 44.40  E-value: 2.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSR-------------AFtVPLKaytheivtlwYRAPE 128
Cdd:cd05055   146 FSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK-IVKICDFGLARdimndsnyvvkgnAR-LPVK----------WMAPE 213
                          90       100
                  ....*....|....*....|....
gi 1063706111 129 VLLGSThYSTAVDIWSVGCIFAEM 152
Cdd:cd05055   214 SIFNCV-YTFESDVWSYGILLWEI 236
PTK_HER3 cd05111
Pseudokinase domain of the Protein Tyrosine Kinase, HER3; HER3 (ErbB3) is a member of the EGFR ...
39-153 2.77e-05

Pseudokinase domain of the Protein Tyrosine Kinase, HER3; HER3 (ErbB3) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 contains an impaired tyr kinase domain, which lacks crucial residues for catalytic activity against exogenous substrates but is still able to bind ATP and autophosphorylate. HER3 binds the neuregulin ligands, NRG1 and NRG2, and it relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. The HER3 subfamily is part of a larger superfamily that includes other pseudokinases and the the catalytic domains of active kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173656 [Multi-domain]  Cd Length: 279  Bit Score: 44.18  E-value: 2.77e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  39 MDEEDSHRKGSNPRpleasLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYTH- 117
Cdd:cd05111    96 LDHVRQHRGSLGPQ-----LLLNWCVQIAKGMYYLEEHRMVHRNLAARNVLL-KSPSQVQVADFGVADLLYPDDKKYFYs 169
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1063706111 118 EIVT--LWYRAPEVLLGS-THYStavDIWSVGCIFAEMI 153
Cdd:cd05111   170 EAKTpiKWMALESIHFGKyTHQS---DVWSYGVTVWEMM 205
STKc_MRCK_beta cd05624
Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control ...
74-163 3.72e-05

Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase (MRCK) beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MRCK-beta is expressed ubiquitously in many tissues. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. The MRCK-beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This alignment model includes the dimerization domain.


Pssm-ID: 270774 [Multi-domain]  Cd Length: 409  Bit Score: 44.23  E-value: 3.72e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  74 HSHGVLHRDLKPQNLLLDKDkGILKIADLG----LSRAFTVPLKAythEIVTLWYRAPEVLL----GSTHYSTAVDIWSV 145
Cdd:cd05624   190 HQLHYVHRDIKPDNVLLDMN-GHIRLADFGsclkMNDDGTVQSSV---AVGTPDYISPEILQamedGMGKYGPECDWWSL 265
                          90
                  ....*....|....*...
gi 1063706111 146 GCIFAEMIRRQALFPGDS 163
Cdd:cd05624   266 GVCMYEMLYGETPFYAES 283
STKc_NDR1 cd05628
Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1; STKs catalyze ...
2-153 4.76e-05

Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NDR1 (also called STK38) plays a role in proper centrosome duplication. It is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to also act as a tumor suppressor. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. The NDR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270777 [Multi-domain]  Cd Length: 376  Bit Score: 43.87  E-value: 4.76e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111   2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALK---KTRLEMDEEDSHRKGSNPRPLEA-SLVQRFMFQLFK--------- 68
Cdd:cd05628     1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKilrKADMLEKEQVGHIRAERDILVEAdSLWVVKMFYSFQdklnlylim 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  69 --------------------------------GVAHCHSHGVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTvplKAYT 116
Cdd:cd05628    81 eflpggdmmtllmkkdtlteeetqfyiaetvlAIDSIHQLGFIHRDIKPDNLLLDS-KGHVKLSDFGLCTGLK---KAHR 156
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063706111 117 HEI----------------------VTLW----------------YRAPEVLLgSTHYSTAVDIWSVGCIFAEMI 153
Cdd:cd05628   157 TEFyrnlnhslpsdftfqnmnskrkAETWkrnrrqlafstvgtpdYIAPEVFM-QTGYNKLCDWWSLGVIMYEML 230
PTK_CCK4 cd05046
Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4; CCK4, also ...
49-152 4.91e-05

Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4; CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor PTK (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain, which shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. The CCK4 subfamily is part of a larger superfamily that includes other pseudokinases and the catalytic domains of active kinases including PTKs, protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133178 [Multi-domain]  Cd Length: 275  Bit Score: 43.61  E-value: 4.91e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRafTVPLKAYTH---EIVTLWYR 125
Cdd:cd05046   109 LKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQR-EVKVSLLSLSK--DVYNSEYYKlrnALIPLRWL 185
                          90       100
                  ....*....|....*....|....*..
gi 1063706111 126 APEVLLgSTHYSTAVDIWSVGCIFAEM 152
Cdd:cd05046   186 APEAVQ-EDDFSTKSDVWSFGVLMWEV 211
STKc_RIP2 cd14026
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 2; STKs catalyze ...
45-159 4.96e-05

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP2, also called RICK or CARDIAK, harbors a C-terminal Caspase Activation and Recruitment domain (CARD) belonging to the Death domain (DD) superfamily. It functions as an effector kinase downstream of the pattern recognition receptors from the Nod-like (NLR) family, Nod1 and Nod2, which recognizes bacterial peptidoglycans released upon infection. RIP2 may also be involved in regulating wound healing and keratinocyte proliferation. RIP kinases serve as essential sensors of cellular stress. The RIP2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270928 [Multi-domain]  Cd Length: 284  Bit Score: 43.37  E-value: 4.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 HRKGSNPrPLEASLVQRFMFQLFKGVAHCH--SHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFTVPLKAYTHEIV-- 120
Cdd:cd14026    89 HEKDIYP-DVAWPLRLRILYEIALGVNYLHnmSPPLLHHDLKTQNILLD-GEFHVKIADFGLSKWRQLSISQSRSSKSap 166
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 121 ---TLWYRAPEVLLGSTHYSTAV--DIWSVGCIFAEMIRRQALF 159
Cdd:cd14026   167 eggTIIYMPPEEYEPSQKRRASVkhDIYSYAIIMWEVLSRKIPF 210
PTKc_Kit cd05104
Catalytic domain of the Protein Tyrosine Kinase, Kit; PTKs catalyze the transfer of the ...
62-169 5.03e-05

Catalytic domain of the Protein Tyrosine Kinase, Kit; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. The Kit subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270682 [Multi-domain]  Cd Length: 375  Bit Score: 43.74  E-value: 5.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  62 FMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAFT------------VPLKaytheivtlwYRAPEV 129
Cdd:cd05104   219 FSYQVAKGMEFLASKNCIHRDLAARNILLTHGR-ITKICDFGLARDIRndsnyvvkgnarLPVK----------WMAPES 287
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1063706111 130 LLGSThYSTAVDIWSVGCIFAEMIRR-QALFPG---DSEFQQLL 169
Cdd:cd05104   288 IFECV-YTFESDVWSYGILLWEIFSLgSSPYPGmpvDSKFYKMI 330
PTKc_Mer cd14204
Catalytic Domain of the Protein Tyrosine Kinase, Mer; PTKs catalyze the transfer of the ...
44-174 5.23e-05

Catalytic Domain of the Protein Tyrosine Kinase, Mer; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Mer (or Mertk) is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Mer is a member of the TAM subfamily, composed of receptor PTKs (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. The Mer subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271106 [Multi-domain]  Cd Length: 284  Bit Score: 43.38  E-value: 5.23e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  44 SHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILkIADLGLSRaftvplKAYTHEivtlW 123
Cdd:cd14204   107 RSRLGSGPQHVPLQTLLKFMIDIALGMEYLSSRNFLHRDLAARNCMLRDDMTVC-VADFGLSK------KIYSGD----Y 175
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063706111 124 YRAPEVL-----------LGSTHYSTAVDIWSVGCIFAEMIRR-QALFPGDSE---FQQLLHIFRL 174
Cdd:cd14204   176 YRQGRIAkmpvkwiavesLADRVYTVKSDVWAFGVTMWEIATRgMTPYPGVQNheiYDYLLHGHRL 241
PTKc_Src_Fyn_like cd14203
Catalytic domain of a subset of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
65-200 5.72e-05

Catalytic domain of a subset of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily includes a subset of Src-like PTKs including Src, Fyn, Yrk, and Yes, which are all widely expressed. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. They are also implicated in acute inflammatory responses and osteoclast function. The Src/Fyn-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271105 [Multi-domain]  Cd Length: 248  Bit Score: 43.37  E-value: 5.72e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAF-----------TVPLKaytheivtlwYRAPEVLLGS 133
Cdd:cd14203    99 QIASGMAYIERMNYIHRDLRAANILVG-DNLVCKIADFGLARLIedneytarqgaKFPIK----------WTAPEAALYG 167
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 134 tHYSTAVDIWSVGCIFAEMIRRQAL-FPGDSEFQQLLHIFRLLGTPTEQQWPGV---MALRDWHVYPKWEP 200
Cdd:cd14203   168 -RFTIKSDVWSFGILLTELVTKGRVpYPGMNNREVLEQVERGYRMPCPPGCPESlheLMCQCWRKDPEERP 237
PTKc_DDR2 cd05095
Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2; PTKs catalyze ...
49-153 5.81e-05

Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a receptor PTK (RTK) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDR2 results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens as well as collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. The DDR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270677 [Multi-domain]  Cd Length: 297  Bit Score: 43.44  E-value: 5.81e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  49 SNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAF------------TVPLKayt 116
Cdd:cd05095   123 SNALTVSYSDLRFMAAQIASGMKYLSSLNFVHRDLATRNCLVGKNYTI-KIADFGMSRNLysgdyyriqgraVLPIR--- 198
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1063706111 117 heivtlWYRAPEVLLGSthYSTAVDIWSVGCIFAEMI 153
Cdd:cd05095   199 ------WMSWESILLGK--FTTASDVWAFGVTLWETL 227
STK_BAK1_like cd14664
Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs; ...
45-153 5.89e-05

Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes three leucine-rich repeat receptor-like kinases (LRR-RLKs): Arabidopsis thaliana BAK1 and CLAVATA1 (CLV1), and Physcomitrella patens CLL1B clavata1-like receptor S/T protein kinase. BAK1 functions in various signaling pathways. It plays a role in BR (brassinosteroid)-regulated plant development as a co-receptor of BRASSINOSTEROID (BR) INSENSITIVE 1 (BRI1), the receptor for BRs, and is required for full activation of BR signaling. It also modulates pathways involved in plant resistance to pathogen infection (pattern-triggered immunity, PTI) and herbivore attack (wound- or herbivore feeding-induced accumulation of jasmonic acid (JA) and JA-isoleucine. CLV1, directly binds small signaling peptides, CLAVATA3 (CLV3) and CLAVATA3/EMBRYO SURROUNDING REGI0N (CLE), to restrict stem cell proliferation: the CLV3-CLV1-WUS (WUSCHEL) module influences stem cell maintenance in the shoot apical meristem, and the CLE40 (CLAVATA3/EMBRYO SURROUNDING REGION40) -ACR4 (CRINKLY4) -CLV1- WOX5 (WUSCHEL-RELATED HOMEOBOX5) module at the root apical meristem. The STK_BAK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271134 [Multi-domain]  Cd Length: 270  Bit Score: 43.25  E-value: 5.89e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  45 HRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHG---VLHRDLKPQNLLLDKDKGIlKIADLGLSRaFTVPLKAYTHEIV- 120
Cdd:cd14664    82 HSRPESQPPLDWETRQRIALGSARGLAYLHHDCsplIIHRDVKSNNILLDEEFEA-HVADFGLAK-LMDDKDSHVMSSVa 159
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1063706111 121 -TLWYRAPEVLlgSTHYST-AVDIWSVGCIFAEMI 153
Cdd:cd14664   160 gSYGYIAPEYA--YTGKVSeKSDVYSYGVVLLELI 192
PTKc_DDR_like cd05097
Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases; PTKs catalyze the ...
65-152 6.13e-05

Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor PTKs (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. The DDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133228 [Multi-domain]  Cd Length: 295  Bit Score: 43.43  E-value: 6.13e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAF------------TVPLKaytheivtlWYRAPEVLLG 132
Cdd:cd05097   137 QIASGMKYLASLNFVHRDLATRNCLVGNHYTI-KIADFGMSRNLysgdyyriqgraVLPIR---------WMAWESILLG 206
                          90       100
                  ....*....|....*....|
gi 1063706111 133 SthYSTAVDIWSVGCIFAEM 152
Cdd:cd05097   207 K--FTTASDVWAFGVTLWEM 224
PK_SCY1_like cd14011
Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein ...
38-243 6.28e-05

Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. This subfamily is composed of the catalytically inactive kinases with similarity to yeast Scy1. It includes four mammalian proteins called SCY1-like protein 1 (SCYL1), SCYL2, SCYL3, as well as Testis-EXpressed protein 14 (TEX14). SCYL1 binds to and co-localizes with the membrane trafficking coatomer I (COPI) complex, and regulates COPI-mediated vesicle trafficking. Null mutations in the SCYL1 gene are responsible for the pathology in mdf (muscle-deficient) mice which display progressive motor neuropathy. SCYL2, also called coated vesicle-associated kinase of 104 kDa (CVAK104), is involved in the trafficking of clathrin-coated vesicles. It also binds the HIV-1 accessory protein Vpu and acts as a regulatory factor that promotes the dephosphorylation of Vpu, facilitating the restriction of HIV-1 release. SCYL3, also called ezrin-binding protein PACE-1, may be involved in regulating cell adhesion and migration. TEX14 is required for spermatogenesis and male fertility. It localizes to kinetochores (KT) during mitosis and is a target of the mitotic kinase PLK1. It regulates the maturation of the outer KT and the KT-microtubule attachment. The SCY1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270913 [Multi-domain]  Cd Length: 287  Bit Score: 43.08  E-value: 6.28e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  38 EMDEEDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSH-GVLHRDLKPQNLLLDKdKGILKIADLGLSRAFTVPLKAYT 116
Cdd:cd14011    95 ERDNMPSPPPELQDYKLYDVEIKYGLLQISEALSFLHNDvKLVHGNICPESVVINS-NGEWKLAGFDFCISSEQATDQFP 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111 117 H-----------EIVTLWYRAPEVLLGSTHySTAVDIWSVGCIfaemirrqalfpgdsefqqLLHIFRLLGTPTEqqwpg 185
Cdd:cd14011   174 YfreydpnlpplAQPNLNYLAPEYILSKTC-DPASDMFSLGVL-------------------IYAIYNKGKPLFD----- 228
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063706111 186 vmALRDWHVYPKWEPQDLSRAVPSLS--PEGI-DLLTQMLKYNPAERISAKAALDHPYFDS 243
Cdd:cd14011   229 --CVNNLLSYKKNSNQLRQLSLSLLEkvPEELrDHVKTLLNVTPEVRPDAEQLSKIPFFDD 287
STKc_B-Raf cd14151
Catalytic domain of the Serine/Threonine Kinase, B-Raf (Rapidly Accelerated Fibrosarcoma) ...
65-156 6.64e-05

Catalytic domain of the Serine/Threonine Kinase, B-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. B-Raf activates ERK with the strongest magnitude, compared with other Raf kinases. Mice embryos deficient in B-Raf die around midgestation due to vascular hemorrhage caused by apoptotic endothelial cells. Mutations in B-Raf have been implicated in initiating tumorigenesis and tumor progression, and are found in malignant cutaneous melanoma, papillary thyroid cancer, as well as in ovarian and colorectal carcinomas. Most oncogenic B-Raf mutations are located at the activation loop of the kinase and surrounding regions; the V600E mutation accounts for around 90% of oncogenic mutations. The V600E mutant constitutively activates MEK, resulting in sustained activation of ERK. B-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. They function in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The B-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271053 [Multi-domain]  Cd Length: 274  Bit Score: 43.13  E-value: 6.64e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGIlKIADLGLSRAFTVPLKAYTHEIVT---LWYrAPEV--LLGSTHYSTA 139
Cdd:cd14151   112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATVKSRWSGSHQFEQLSgsiLWM-APEVirMQDKNPYSFQ 189
                          90
                  ....*....|....*..
gi 1063706111 140 VDIWSVGCIFAEMIRRQ 156
Cdd:cd14151   190 SDVYAFGIVLYELMTGQ 206
PTKc_Musk cd05050
Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase; PTKs catalyze the ...
48-152 7.83e-05

Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor PTK (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. The Musk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133181 [Multi-domain]  Cd Length: 288  Bit Score: 42.90  E-value: 7.83e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  48 GSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKgILKIADLGLSRAF--TVPLKAYTHEIVTLWYR 125
Cdd:cd05050   121 GLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENM-VVKIADFGLSRNIysADYYKASENDAIPIRWM 199
                          90       100
                  ....*....|....*....|....*..
gi 1063706111 126 APEVLLgSTHYSTAVDIWSVGCIFAEM 152
Cdd:cd05050   200 PPESIF-YNRYTTESDVWAYGVVLWEI 225
PTKc_Fyn cd05070
Catalytic domain of the Protein Tyrosine Kinase, Fyn; PTKs catalyze the transfer of the ...
65-184 8.94e-05

Catalytic domain of the Protein Tyrosine Kinase, Fyn; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Fyn/Yrk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase.


Pssm-ID: 270655 [Multi-domain]  Cd Length: 274  Bit Score: 42.75  E-value: 8.94e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  65 QLFKGVAHCHSHGVLHRDLKPQNLLLDkDKGILKIADLGLSRAFT-VPLKAYTHEIVTLWYRAPEVLLgSTHYSTAVDIW 143
Cdd:cd05070   113 QVAAGMAYIERMNYIHRDLRSANILVG-NGLICKIADFGLARLIEdNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVW 190
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1063706111 144 SVGCIFAEMIRR-QALFPGDSEFQQLLHIFRLLGTPTEQQWP 184
Cdd:cd05070   191 SFGILLTELVTKgRVPYPGMNNREVLEQVERGYRMPCPQDCP 232
STKc_TGFbR2_like cd14055
Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Type II ...
66-155 9.96e-05

Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Type II Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TGFbR2 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors, such as TGFbR2, are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. TGFbR2 acts as the receptor for TGFbeta, which is crucial in growth control and homeostasis in many different tissues. It plays roles in regulating apoptosis and in maintaining the balance between self renewal and cell loss. It also plays a key role in maintaining vascular integrity and in regulating responses to genotoxic stress. Mutations in TGFbR2 can cause aortic aneurysm disorders such as Loeys-Dietz and Marfan syndromes. The TGFbR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270957 [Multi-domain]  Cd Length: 295  Bit Score: 42.75  E-value: 9.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  66 LFKGVAHCHSH---------GVLHRDLKPQNLLLdKDKGILKIADLGLS----RAFTVPLKAYTHEIVTLWYRAPEVL-- 130
Cdd:cd14055   107 LARGLAHLHSDrtpcgrpkiPIAHRDLKSSNILV-KNDGTCVLADFGLAlrldPSLSVDELANSGQVGTARYMAPEALes 185
                          90       100
                  ....*....|....*....|....*...
gi 1063706111 131 ---LGSTHYSTAVDIWSVGCIFAEMIRR 155
Cdd:cd14055   186 rvnLEDLESFKQIDVYSMALVLWEMASR 213
PTKc_Zap-70 cd05115
Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa; PTKs ...
57-146 1.02e-04

Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a cytoplasmic (or nonreceptor) PTK containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. The Zap-70 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270686 [Multi-domain]  Cd Length: 269  Bit Score: 42.63  E-value: 1.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063706111  57 SLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLdKDKGILKIADLGLSRAFTVPLKAYTHEIVTLW---YRAPEVLLgS 133
Cdd:cd05115   104 SNVVELMHQVSMGMKYLEEKNFVHRDLAARNVLL-VNQHYAKISDFGLSKALGADDSYYKARSAGKWplkWYAPECIN-F 181
                          90
                  ....*....|...
gi 1063706111 134 THYSTAVDIWSVG 146
Cdd:cd05115   182 RKFSSRSDVWSYG 194
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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