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Conserved domains on  [gi|1063704451|ref|NP_001323955|]
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hematological/neurological-like protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4057 super family cl16198
Protein of unknown function (DUF4057); This family of proteins is functionally uncharacterized. ...
8-287 6.56e-93

Protein of unknown function (DUF4057); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 279 and 322 amino acids in length.


The actual alignment was detected with superfamily member pfam13266:

Pssm-ID: 404197  Cd Length: 299  Bit Score: 277.04  E-value: 6.56e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704451   8 GGQITNAETKSLNTnvshRKNCSGHKLKEMTGSDIFSDDGKYDPnhqtrihyhqdqlsqisfsGEENATTPMNGKDDPNH 87
Cdd:pfam13266  50 GGQVTDEEAESLNK----RKPCSGYKLKEMTGSGIFAANGEDDA-------------------SESGSANPNNKTSVRMY 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704451  88 QTRIhyhqDQRSQISFSGEENVTPKKPTTLNEAAKQKELSRTVETQADSKCKKkQISNTKNKAMSGHDIFA-SPESQPRR 166
Cdd:pfam13266 107 QQAV----NGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESESDSKLKK-QISDAKSKELSGHDIFApPPEIPPRP 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704451 167 LfgGATQSEVKGNKNTEESAPRSSRASVKTSN--GQSSNRLFSEEHVVKSSKKIHNQKsqFQGLTSNGIFKSDkIPPGYS 244
Cdd:pfam13266 182 L--AARNLELKESKDMGEPAPRNVRTSVKVSNpaGGQSNILFGEEPVVKTAKKIHNQK--FAELTGNDIFKGD-APPGSA 256
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063704451 245 EKMQSSAKKREMSGHNIFADGKSEYRDYYGGARRPPGGESSIS 287
Cdd:pfam13266 257 EKPLSTAKLKEMSGSDIFADGKAESRDYLGGVRKPPGGESSIA 299
 
Name Accession Description Interval E-value
DUF4057 pfam13266
Protein of unknown function (DUF4057); This family of proteins is functionally uncharacterized. ...
8-287 6.56e-93

Protein of unknown function (DUF4057); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 279 and 322 amino acids in length.


Pssm-ID: 404197  Cd Length: 299  Bit Score: 277.04  E-value: 6.56e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704451   8 GGQITNAETKSLNTnvshRKNCSGHKLKEMTGSDIFSDDGKYDPnhqtrihyhqdqlsqisfsGEENATTPMNGKDDPNH 87
Cdd:pfam13266  50 GGQVTDEEAESLNK----RKPCSGYKLKEMTGSGIFAANGEDDA-------------------SESGSANPNNKTSVRMY 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704451  88 QTRIhyhqDQRSQISFSGEENVTPKKPTTLNEAAKQKELSRTVETQADSKCKKkQISNTKNKAMSGHDIFA-SPESQPRR 166
Cdd:pfam13266 107 QQAV----NGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESESDSKLKK-QISDAKSKELSGHDIFApPPEIPPRP 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704451 167 LfgGATQSEVKGNKNTEESAPRSSRASVKTSN--GQSSNRLFSEEHVVKSSKKIHNQKsqFQGLTSNGIFKSDkIPPGYS 244
Cdd:pfam13266 182 L--AARNLELKESKDMGEPAPRNVRTSVKVSNpaGGQSNILFGEEPVVKTAKKIHNQK--FAELTGNDIFKGD-APPGSA 256
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063704451 245 EKMQSSAKKREMSGHNIFADGKSEYRDYYGGARRPPGGESSIS 287
Cdd:pfam13266 257 EKPLSTAKLKEMSGSDIFADGKAESRDYLGGVRKPPGGESSIA 299
 
Name Accession Description Interval E-value
DUF4057 pfam13266
Protein of unknown function (DUF4057); This family of proteins is functionally uncharacterized. ...
8-287 6.56e-93

Protein of unknown function (DUF4057); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 279 and 322 amino acids in length.


Pssm-ID: 404197  Cd Length: 299  Bit Score: 277.04  E-value: 6.56e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704451   8 GGQITNAETKSLNTnvshRKNCSGHKLKEMTGSDIFSDDGKYDPnhqtrihyhqdqlsqisfsGEENATTPMNGKDDPNH 87
Cdd:pfam13266  50 GGQVTDEEAESLNK----RKPCSGYKLKEMTGSGIFAANGEDDA-------------------SESGSANPNNKTSVRMY 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704451  88 QTRIhyhqDQRSQISFSGEENVTPKKPTTLNEAAKQKELSRTVETQADSKCKKkQISNTKNKAMSGHDIFA-SPESQPRR 166
Cdd:pfam13266 107 QQAV----NGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESESDSKLKK-QISDAKSKELSGHDIFApPPEIPPRP 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063704451 167 LfgGATQSEVKGNKNTEESAPRSSRASVKTSN--GQSSNRLFSEEHVVKSSKKIHNQKsqFQGLTSNGIFKSDkIPPGYS 244
Cdd:pfam13266 182 L--AARNLELKESKDMGEPAPRNVRTSVKVSNpaGGQSNILFGEEPVVKTAKKIHNQK--FAELTGNDIFKGD-APPGSA 256
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1063704451 245 EKMQSSAKKREMSGHNIFADGKSEYRDYYGGARRPPGGESSIS 287
Cdd:pfam13266 257 EKPLSTAKLKEMSGSDIFADGKAESRDYLGGVRKPPGGESSIA 299
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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