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Conserved domains on  [gi|1063695673|ref|NP_001320920|]
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WEB family protein (DUF827) [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ZapD super family cl01892
Cell division protein; Cell division protein ZapD enhances FtsZ-ring assembly. It directly ...
 43-67 7.34e-03

Cell division protein; Cell division protein ZapD enhances FtsZ-ring assembly. It directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


The actual alignment was detected with superfamily member pfam07072:

Pssm-ID: 470388  Cd Length: 210  Bit Score: 35.17  E-value: 7.34e-03
                          10        20
                  ....*....|....*....|....*
gi 1063695673  43 ELERTKQELQKLRVDPGVNETKLDE 67
Cdd:pfam07072  48 ELERQRQALAAWRGNPGVDQEALDA 72
 
Name Accession Description Interval E-value
ZapD pfam07072
Cell division protein; Cell division protein ZapD enhances FtsZ-ring assembly. It directly ...
 43-67 7.34e-03

Cell division protein; Cell division protein ZapD enhances FtsZ-ring assembly. It directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


Pssm-ID: 462080  Cd Length: 210  Bit Score: 35.17  E-value: 7.34e-03
                          10        20
                  ....*....|....*....|....*
gi 1063695673  43 ELERTKQELQKLRVDPGVNETKLDE 67
Cdd:pfam07072  48 ELERQRQALAAWRGNPGVDQEALDA 72
 
Name Accession Description Interval E-value
ZapD pfam07072
Cell division protein; Cell division protein ZapD enhances FtsZ-ring assembly. It directly ...
 43-67 7.34e-03

Cell division protein; Cell division protein ZapD enhances FtsZ-ring assembly. It directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


Pssm-ID: 462080  Cd Length: 210  Bit Score: 35.17  E-value: 7.34e-03
                          10        20
                  ....*....|....*....|....*
gi 1063695673  43 ELERTKQELQKLRVDPGVNETKLDE 67
Cdd:pfam07072  48 ELERQRQALAAWRGNPGVDQEALDA 72
SOGA pfam11365
Protein SOGA; The SOGA (suppressor of glucose by autophagy) family consists of proteins SOGA1, ...
 18-67 9.42e-03

Protein SOGA; The SOGA (suppressor of glucose by autophagy) family consists of proteins SOGA1, SOGA2, and SOGA3. SOGA1 regulates autophagy by playing a role in the reduction of glucose production in an adiponectin and insulin dependent manner.


Pssm-ID: 463264 [Multi-domain]  Cd Length: 95  Bit Score: 33.81  E-value: 9.42e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063695673  18 ETRYDLKRAKEESIQMRNSLSCLKEELERTKQELQKLRVDPGVNETKLDE 67
Cdd:pfam11365   4 ELRRQLQFVEEEAELLRRSLSEIEDHNKQLTNELNKYKSKYGPDESSLSD 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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